Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA10	0	genome.wustl.edu	37	17	67181631	67181631	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	67181631	67181631	G	A	SNP	ABCA10	ENST00000269081	human	ensembl	69_37n	-1	known	silent	c.2484	p.I828	0.337	NULL	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	146	1	0.68	124	89	41.78	-	-	-
ANKRD28	0	genome.wustl.edu	37	3	15755061	15755061	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	15755061	15755061	A	G	SNP	ANKRD28	ENST00000383777	human	ensembl	69_37n	-1	known	missense	c.1172	p.L391P	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD28	HGNC	ENSG00000206560	133	0	0.00	45	184	80.35	-	-	-
ARID1B	0	genome.wustl.edu	37	6	157528561	157528561	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	157528561	157528561	G	T	SNP	ARID1B	ENST00000367148	human	ensembl	69_37n	+1	known	missense	c.6406	p.V2136L	1.000	pfam_DUF3518,superfamily_ARM-type_fold	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	241	0	0.00	176	41	18.89	-	-	-
BRD1	0	genome.wustl.edu	37	22	50192208	50192208	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	22	50192208	50192208	C	A	SNP	BRD1	ENST00000216267	human	ensembl	69_37n	-1	known	nonsense	c.1783	p.E595*	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP,pfscan_PWWP,pfscan_Znf_PHD-finger,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425	26	0	0.00	38	7	15.56	-	-	-
BRD1	0	genome.wustl.edu	37	22	50192209	50192209	+	Silent	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	22	50192209	50192209	C	T	SNP	BRD1	ENST00000216267	human	ensembl	69_37n	-1	known	silent	c.1782	p.K594	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP,pfscan_PWWP,pfscan_Znf_PHD-finger,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425	26	0	0.00	37	7	15.91	-	-	-
BTG4	0	genome.wustl.edu	37	11	111367981	111367981	+	Silent	SNP	T	T	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	111367981	111367981	T	C	SNP	BTG4	ENST00000356018	human	ensembl	69_37n	-1	known	silent	c.465	p.E155	0.336	NULL	pfam_Anti_prolifrtn,smart_Anti_prolifrtn,prints_Anti_prolifrtn	-	no_errors	BTG4	HGNC	ENSG00000137707	281	0	0.00	230	147	38.89	-	-	-
CAGE1	0	genome.wustl.edu	37	6	7373460	7373460	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	7373460	7373460	A	G	SNP	CAGE1	ENST00000338150	human	ensembl	69_37n	-1	known	missense	c.1592	p.I531T	0.000	NULL	NULL	-	no_errors	CAGE1	HGNC	ENSG00000164304	33	0	0.00	72	21	22.58	-	-	-
CCDC27	0	genome.wustl.edu	37	1	3670779	3670779	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	3670779	3670779	C	T	SNP	CCDC27	ENST00000294600	human	ensembl	69_37n	+1	known	missense	c.416	p.T139I	0.991	NULL	superfamily_Prefoldin	-	no_errors	CCDC27	HGNC	ENSG00000162592	35	0	0.00	33	10	23.26	-	-	-
CD80	0	genome.wustl.edu	37	3	119263560	119263560	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	119263560	119263560	G	A	SNP	CD80	ENST00000264246	human	ensembl	69_37n	-1	known	silent	c.255	p.P85	0.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	CD80	HGNC	ENSG00000121594	135	0	0.00	135	27	16.67	-	-	-
CDH11	0	genome.wustl.edu	37	16	64984859	64984859	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	64984859	64984859	G	A	SNP	CDH11	ENST00000268603	human	ensembl	69_37n	-1	known	missense	c.1705	p.L569F	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	32	0	0.00	40	11	21.57	-	-	-
CELF4	0	genome.wustl.edu	37	18	34850769	34850769	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	34850769	34850769	G	A	SNP	CELF4	ENST00000361795	human	ensembl	69_37n	-1	known	missense	c.1061	p.A354V	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489	38	0	0.00	17	8	32.00	-	-	-
CHD6	0	genome.wustl.edu	37	20	40081463	40081463	+	Silent	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	20	40081463	40081463	C	T	SNP	CHD6	ENST00000373233	human	ensembl	69_37n	-1	known	silent	c.3240	p.T1080	0.052	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	128	0	0.00	176	23	11.56	-	-	-
CIITA	0	genome.wustl.edu	37	16	10995394	10995394	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	10995394	10995394	G	C	SNP	CIITA	ENST00000324288	human	ensembl	69_37n	+1	known	missense	c.460	p.D154H	0.078	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583	27	0	0.00	196	62	24.03	-	-	-
DPP3	0	genome.wustl.edu	37	11	66259056	66259056	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	66259056	66259056	C	T	SNP	DPP3	ENST00000360510	human	ensembl	69_37n	+1	known	missense	c.890	p.S297F	1.000	pirsf_Pept_49_dipeptidyl-pept-3_euk	pirsf_Pept_49_dipeptidyl-pept-3_euk	-	no_errors	DPP3	HGNC	ENSG00000254986	35	0	0.00	18	7	28.00	-	-	-
DUSP27	0	genome.wustl.edu	37	1	167088559	167088559	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	167088559	167088559	G	A	SNP	DUSP27	ENST00000271385	human	ensembl	69_37n	+1	known	missense	c.511	p.G171S	0.992	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	34	0	0.00	74	12	13.79	-	-	-
EMB	0	genome.wustl.edu	37	5	49695122	49695122	+	Missense_Mutation	SNP	C	C	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	5	49695122	49695122	C	A	SNP	EMB	ENST00000303221	human	ensembl	69_37n	-1	known	missense	c.969	p.E323D	0.034	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	EMB	HGNC	ENSG00000170571	106	0	0.00	115	33	22.30	-	-	-
ENTPD1	0	genome.wustl.edu	37	10	97626096	97626096	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	10	97626096	97626096	C	T	SNP	ENTPD1	ENST00000371207	human	ensembl	69_37n	+1	known	missense	c.1525	p.L509F	0.000	NULL	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD1	HGNC	ENSG00000138185	85	0	0.00	43	20	31.75	-	-	-
FAM196A	0	genome.wustl.edu	37	10	128973678	128973678	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	10	128973678	128973678	G	C	SNP	FAM196A	ENST00000522781	human	ensembl	69_37n	-1	known	missense	c.982	p.P328A	0.002	NULL	NULL	-	no_errors	FAM196A	HGNC	ENSG00000188916	52	0	0.00	24	8	25.00	-	-	-
FXR1	0	genome.wustl.edu	37	3	180686028	180686031	+	Frame_Shift_Del	DEL	CCTC	CCTC	-			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	CCTC	CCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	180686028	180686031	CCTC	-	DEL	FXR1	ENST00000357559	human	ensembl	69_37n	+1	known	frame_shift_del	c.1388_1391	p.I465fs	1.000:0.998:1.000:1.000	pfam_Frag_X_MRP_fam	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet,superfamily_NA-bd_OB-fold-like,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416	73	0	0.00	55	29	34.52	-	-	-
GP1BA	0	genome.wustl.edu	37	17	4837204	4837204	+	Silent	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	4837204	4837204	C	T	SNP	GP1BA	ENST00000329125	human	ensembl	69_37n	+1	known	silent	c.1305	p.T435	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP1BA	HGNC	ENSG00000185245	17	0	0.00	5	8	61.54	-	-	-
GRM1	0	genome.wustl.edu	37	6	146755726	146755726	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	6	146755726	146755726	G	A	SNP	GRM1	ENST00000282753	human	ensembl	69_37n	+1	known	missense	c.3379	p.E1127K	0.995	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5,pfscan_GPCR_3_C	-	no_errors	GRM1	HGNC	ENSG00000152822	63	0	0.00	61	8	11.59	-	-	-
HGF	0	genome.wustl.edu	37	7	81346551	81346551	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	81346551	81346551	G	A	SNP	HGF	ENST00000222390	human	ensembl	69_37n	-1	known	missense	c.1402	p.R468C	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991	157	0	0.00	191	64	25.10	-	-	-
HMHA1	0	genome.wustl.edu	37	19	1079999	1079999	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	1079999	1079999	G	C	SNP	HMHA1	ENST00000313093	human	ensembl	69_37n	+1	known	missense	c.1585	p.E529Q	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	18	0	0.00	8	4	33.33	-	-	-
HPDL	0	genome.wustl.edu	37	1	45793452	45793452	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	45793452	45793452	G	T	SNP	HPDL	ENST00000334815	human	ensembl	69_37n	+1	known	missense	c.632	p.G211V	0.995	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603	43	0	0.00	14	9	39.13	-	-	-
HS3ST2	0	genome.wustl.edu	37	16	22926832	22926832	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	22926832	22926832	G	A	SNP	HS3ST2	ENST00000261374	human	ensembl	69_37n	+1	known	silent	c.1053	p.P351	0.995	NULL	pfam_Sulfotransferase_dom	-	no_errors	HS3ST2	HGNC	ENSG00000122254	355	0	0.00	491	115	18.98	-	-	-
ICOSLG	0	genome.wustl.edu	37	21	45655412	45655413	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	21	45655412	45655413	-	G	INS	ICOSLG	ENST00000344330	human	ensembl	69_37n	-1	known	frame_shift_ins	c.440_439	p.H147fs	0.000:0.000	pfscan_Ig-like	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like	-	no_errors	ICOSLG	HGNC	ENSG00000160223	14	0	0.00	7	2	22.22	-	-	-
IDS	0	genome.wustl.edu	37	X	148571918	148571918	+	Silent	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	X	148571918	148571918	G	T	SNP	IDS	ENST00000340855	human	ensembl	69_37n	-1	known	silent	c.933	p.V311	0.255	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	104	0	0.00	73	16	17.98	-	-	-
IFI16	0	genome.wustl.edu	37	1	158984681	158984681	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	158984681	158984681	G	T	SNP	IFI16	ENST00000295809	human	ensembl	69_37n	+1	known	missense	c.211	p.D71Y	0.000	pfam_DAPIN,superfamily_DEATH-like,pfscan_DAPIN	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565	189	0	0.00	632	94	12.95	-	-	-
IFT140	0	genome.wustl.edu	37	16	1633329	1633329	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	1633329	1633329	G	A	SNP	IFT140	ENST00000426508	human	ensembl	69_37n	-1	known	missense	c.1418	p.A473V	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	64	0	0.00	77	10	11.49	-	-	-
IGKV1D-12	0	genome.wustl.edu	37	2	90198988	90198988	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	2	90198988	90198988	G	T	SNP	IGKV1D-12	ENST00000390276	human	ensembl	69_37n	+1	known	missense	c.149	p.G50V	0.001	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGKV1D-12	HGNC	ENSG00000240834	347	1	0.29	191	42	18.03	-	-	-
INHBC	0	genome.wustl.edu	37	12	57843320	57843320	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	57843320	57843320	C	T	SNP	INHBC	ENST00000309668	human	ensembl	69_37n	+1	known	nonsense	c.574	p.Q192*	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaC	-	no_errors	INHBC	HGNC	ENSG00000175189	130	0	0.00	119	27	18.49	-	-	-
JHDM1D	0	genome.wustl.edu	37	7	139796372	139796372	+	Missense_Mutation	SNP	T	T	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	139796372	139796372	T	G	SNP	JHDM1D	ENST00000397560	human	ensembl	69_37n	-1	known	missense	c.2357	p.D786A	0.244	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	JHDM1D	HGNC	ENSG00000006459	99	0	0.00	161	29	15.26	-	-	-
KLF8	0	genome.wustl.edu	37	X	56291989	56291989	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	X	56291989	56291989	G	T	SNP	KLF8	ENST00000468660	human	ensembl	69_37n	+1	known	missense	c.458	p.S153I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF8	HGNC	ENSG00000102349	147	0	0.00	97	27	21.77	-	-	-
MAP4K1	0	genome.wustl.edu	37	19	39088168	39088168	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	39088168	39088168	C	T	SNP	MAP4K1	ENST00000591517	human	ensembl	69_37n	-1	known	missense	c.1736	p.G579E	0.162	pfam_Citron,smart_Citron	pfam_Prot_kinase_cat_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP4K1	HGNC	ENSG00000104814	101	0	0.00	66	27	28.72	-	-	-
MRPS11	0	genome.wustl.edu	37	15	89011148	89011148	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	15	89011148	89011148	G	-	DEL	MRPS11	ENST00000325844	human	ensembl	69_37n	+1	known	frame_shift_del	c.75	p.A26fs	0.001	NULL	pfam_Ribosomal_S11	-	no_errors	MRPS11	HGNC	ENSG00000181991	9	0	0.00	7	6	46.15	-	-	-
NAV3	0	genome.wustl.edu	37	12	78570996	78570996	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	78570996	78570996	G	A	SNP	NAV3	ENST00000397909	human	ensembl	69_37n	+1	known	missense	c.5200	p.E1734K	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	196	0	0.00	121	80	39.80	-	-	-
NCKAP5	0	genome.wustl.edu	37	2	133541246	133541246	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	2	133541246	133541246	G	A	SNP	NCKAP5	ENST00000317721	human	ensembl	69_37n	-1	known	silent	c.3138	p.P1046	0.029	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	73	0	0.00	102	30	22.73	-	-	-
NIPAL1	0	genome.wustl.edu	37	4	48027169	48027169	+	Missense_Mutation	SNP	T	T	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	4	48027169	48027169	T	A	SNP	NIPAL1	ENST00000295461	human	ensembl	69_37n	+1	known	missense	c.131	p.V44E	0.000	NULL	pfam_Mg_trans_NIPA,pfam_DMT	-	no_errors	NIPAL1	HGNC	ENSG00000163293	124	0	0.00	161	39	19.50	-	-	-
NMD3	0	genome.wustl.edu	37	3	160952568	160952568	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	160952568	160952568	G	T	SNP	NMD3	ENST00000351193	human	ensembl	69_37n	+1	known	missense	c.411	p.Q137H	1.000	pfam_NMD3	pfam_NMD3	-	no_errors	NMD3	HGNC	ENSG00000169251	202	0	0.00	269	107	28.46	-	-	-
OR5I1	0	genome.wustl.edu	37	11	55703345	55703345	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	55703345	55703345	G	A	SNP	OR5I1	ENST00000301532	human	ensembl	69_37n	-1	known	missense	c.532	p.H178Y	0.981	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825	110	0	0.00	144	39	21.20	-	-	-
PARP12	0	genome.wustl.edu	37	7	139724642	139724642	+	Missense_Mutation	SNP	G	G	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	7	139724642	139724642	G	T	SNP	PARP12	ENST00000263549	human	ensembl	69_37n	-1	known	missense	c.1824	p.S608R	0.607	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Znf_CCCH,smart_Znf_CCCH,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP12	HGNC	ENSG00000059378	45	0	0.00	41	9	18.00	-	-	-
PDE1B	0	genome.wustl.edu	37	12	54967460	54967460	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	54967460	54967460	A	G	SNP	PDE1B	ENST00000243052	human	ensembl	69_37n	+1	known	missense	c.1031	p.K344R	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1B	HGNC	ENSG00000123360	123	0	0.00	56	22	28.21	-	-	-
PIGR	0	genome.wustl.edu	37	1	207107989	207107989	+	Missense_Mutation	SNP	T	T	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	207107989	207107989	T	C	SNP	PIGR	ENST00000356495	human	ensembl	69_37n	-1	known	missense	c.1481	p.Y494C	1.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	PIGR	HGNC	ENSG00000162896	98	0	0.00	65	19	22.62	-	-	-
POLI	0	genome.wustl.edu	37	18	51797757	51797757	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	51797757	51797757	C	T	SNP	POLI	ENST00000579534	human	ensembl	69_37n	+1	known	missense	c.143	p.P48L	0.007	NULL	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLI	HGNC	ENSG00000101751	24	0	0.00	25	12	32.43	-	-	-
RBM23	0	genome.wustl.edu	37	14	23374660	23374660	+	Missense_Mutation	SNP	T	T	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	14	23374660	23374660	T	C	SNP	RBM23	ENST00000359890	human	ensembl	69_37n	-1	known	missense	c.458	p.E153G	1.000	tigrfam_CC1_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_CC1_SF	-	no_errors	RBM23	HGNC	ENSG00000100461	129	0	0.00	52	40	43.48	-	-	-
RIF1	0	genome.wustl.edu	37	2	152273161	152273161	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	2	152273161	152273161	A	G	SNP	RIF1	ENST00000243326	human	ensembl	69_37n	+1	known	missense	c.367	p.I123V	1.000	superfamily_ARM-type_fold	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345	298	0	0.00	365	46	11.19	-	-	-
RTTN	0	genome.wustl.edu	37	18	67759382	67759382	+	Silent	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	18	67759382	67759382	A	G	SNP	RTTN	ENST00000255674	human	ensembl	69_37n	-1	known	silent	c.4107	p.A1369	0.221	NULL	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	96	0	0.00	126	46	26.74	-	-	-
SEZ6L2	0	genome.wustl.edu	37	16	29899946	29899946	+	Silent	SNP	C	C	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	16	29899946	29899946	C	G	SNP	SEZ6L2	ENST00000308713	human	ensembl	69_37n	-1	known	silent	c.954	p.S318	0.685	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_CUB,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	29	0	0.00	30	10	25.00	-	-	-
SI	0	genome.wustl.edu	37	3	164785127	164785127	+	Splice_Site	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	164785127	164785127	C	T	SNP	SI	ENST00000264382	human	ensembl	69_37n	-1	known	splice_site	c.635+1	e5+1	1.000	-	-	-	no_errors	SI	HGNC	ENSG00000090402	74	0	0.00	100	17	14.53	-	-	-
SYT11	0	genome.wustl.edu	37	1	155838473	155838473	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	1	155838473	155838473	G	A	SNP	SYT11	ENST00000368324	human	ensembl	69_37n	+1	known	missense	c.752	p.R251H	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting,prints_Synaptotagmin	-	no_errors	SYT11	HGNC	ENSG00000132718	68	0	0.00	92	99	51.83	-	-	-
TARBP2	0	genome.wustl.edu	37	12	53898183	53898184	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	12	53898183	53898184	-	C	INS	TARBP2	ENST00000266987	human	ensembl	69_37n	+1	known	frame_shift_ins	c.425_426	p.M145fs	0.999:0.994	NULL	pfam_Ds-RNA-bd,smart_Ds-RNA-bd,pfscan_Ds-RNA-bd	-	no_errors	TARBP2	HGNC	ENSG00000139546	72	0	0.00	32	4	11.11	-	-	-
TIGD3	0	genome.wustl.edu	37	11	65124020	65124021	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	11	65124020	65124021	GG	-	DEL	TIGD3	ENST00000309880	human	ensembl	69_37n	+1	known	frame_shift_del	c.741_742	p.L247fs	1.000:1.000	pfam_DDE_SF_endonuclease_CENPB-like	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825	29	0	0.00	21	13	38.24	-	-	-
TM4SF1	0	genome.wustl.edu	37	3	149095219	149095219	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	149095219	149095219	G	C	SNP	TM4SF1	ENST00000305366	human	ensembl	69_37n	-1	known	missense	c.116	p.S39C	0.001	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF1	HGNC	ENSG00000169908	60	0	0.00	36	7	16.28	-	-	-
TP53	0	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	17	7577022	7577022	G	A	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	nonsense	c.916	p.R306*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	75	0	0.00	16	90	84.11	-	-	-
TRIP11	0	genome.wustl.edu	37	14	92472173	92472173	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	14	92472173	92472173	A	G	SNP	TRIP11	ENST00000267622	human	ensembl	69_37n	-1	known	missense	c.2147	p.M716T	0.610	NULL	superfamily_Ribosomal_L29,pfscan_GRIP	-	no_errors	TRIP11	HGNC	ENSG00000100815	253	0	0.00	269	65	19.46	-	-	-
WDFY3	0	genome.wustl.edu	37	4	85648059	85648059	+	Silent	SNP	C	C	T			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	4	85648059	85648059	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	69_37n	-1	known	silent	c.7227	p.E2409	0.997	superfamily_Cyclin-like	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	114	0	0.00	211	27	11.34	-	-	-
ZFYVE1	0	genome.wustl.edu	37	14	73441506	73441507	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	14	73441506	73441507	-	A	INS	ZFYVE1	ENST00000553891	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1968_1967	p.E656fs	0.083:1.000	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_Growth_fac_rcpt,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE1	HGNC	ENSG00000165861	51	0	0.00	26	3	10.34	-	-	-
ZNF133	0	genome.wustl.edu	37	20	18296782	18296783	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	20	18296782	18296783	-	A	INS	ZNF133	ENST00000396026	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1296_1297	p.R432fs	1.000:0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF133	HGNC	ENSG00000125846	137	0	0.00	211	48	18.53	-	-	-
ZNF254	0	genome.wustl.edu	37	19	24289416	24289416	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	24289416	24289416	A	G	SNP	ZNF254	ENST00000357002	human	ensembl	69_37n	+1	known	missense	c.224	p.K75R	0.014	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096	168	0	0.00	274	86	23.89	-	-	-
ZNF419	0	genome.wustl.edu	37	19	58004585	58004585	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	58004585	58004585	G	A	SNP	ZNF419	ENST00000424930	human	ensembl	69_37n	+1	known	silent	c.663	p.Q221	0.087	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF419	HGNC	ENSG00000105136	120	1	0.83	90	50	35.71	-	-	-
ZNF502	0	genome.wustl.edu	37	3	44762851	44762851	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	3	44762851	44762851	G	C	SNP	ZNF502	ENST00000296091	human	ensembl	69_37n	+1	known	missense	c.542	p.R181T	0.747	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF502	HGNC	ENSG00000196653	218	0	0.00	286	49	14.63	-	-	-
ZNF550	0	genome.wustl.edu	37	19	58058369	58058369	+	Silent	SNP	G	G	A			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	19	58058369	58058369	G	A	SNP	ZNF550	ENST00000344222	human	ensembl	69_37n	-1	known	silent	c.1243	p.L415	0.023	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	AC003682.1	Clone_based_ensembl_gene	ENSG00000251369	56	0	0.00	40	7	14.89	-	-	-
ZNF658	0	genome.wustl.edu	37	9	40774730	40774730	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A0JL-01A-11W-A071-09	TCGA-AO-A0JL-10A-01W-A071-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	56a22648-be92-402c-a225-bcaa44a7e612	efe1ab84-6be7-4543-b692-f12470b5ddea	9	40774730	40774730	G	C	SNP	ZNF658	ENST00000377626	human	ensembl	69_37n	-1	known	missense	c.545	p.A182G	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF658	HGNC	ENSG00000196409	73	0	0.00	49	30	37.97	-	-	-
