Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANAPC7	0	genome.wustl.edu	37	12	110834204	110834204	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	12	110834204	110834204	G	A	SNP	ANAPC7	ENST00000455511	human	ensembl	69_37n	-1	known	missense	c.257	p.S86F	1.000	NULL	pfam_TPR_2,pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	ANAPC7	HGNC	ENSG00000196510	27	0	0.00	61	14	18.67	-	-	-
ANKDD1A	0	genome.wustl.edu	37	15	65239671	65239671	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	15	65239671	65239671	C	-	DEL	ANKDD1A	ENST00000380230	human	ensembl	69_37n	+1	known	frame_shift_del	c.1209	p.H404fs	1.000	superfamily_DEATH-like	pfam_Ankyrin_rpt,pfam_Death,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death,prints_Ankyrin_rpt	-	no_errors	ANKDD1A	HGNC	ENSG00000166839	62	0	0.00	12	2	14.29	-	-	-
ANKRD11	0	genome.wustl.edu	37	16	89350800	89350800	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	16	89350800	89350800	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	69_37n	-1	known	missense	c.2150	p.S717L	0.023	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	50	0	0.00	18	38	67.86	-	-	-
ARHGAP11A	0	genome.wustl.edu	37	15	32908481	32908481	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	15	32908481	32908481	G	A	SNP	ARHGAP11A	ENST00000361627	human	ensembl	69_37n	+1	known	silent	c.69	p.V23	0.990	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP11A	HGNC	ENSG00000198826	102	0	0.00	49	15	23.44	-	-	-
B3GALTL	0	genome.wustl.edu	37	13	31903672	31903672	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	13	31903672	31903672	C	T	SNP	B3GALTL	ENST00000343307	human	ensembl	69_37n	+1	known	missense	c.1364	p.S455F	0.946	pfam_Fringe-like	pfam_Fringe-like	-	no_errors	B3GALTL	HGNC	ENSG00000187676	39	0	0.00	84	152	64.41	-	-	-
CD69	0	genome.wustl.edu	37	12	9907739	9907739	+	Silent	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	12	9907739	9907739	C	T	SNP	CD69	ENST00000228434	human	ensembl	69_37n	-1	known	silent	c.306	p.V102	0.000	pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CD69	HGNC	ENSG00000110848	50	0	0.00	43	8	15.69	-	-	-
CLK1	0	genome.wustl.edu	37	2	201726041	201726041	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	2	201726041	201726041	A	C	SNP	CLK1	ENST00000321356	human	ensembl	69_37n	-1	known	missense	c.310	p.S104A	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CLK1	HGNC	ENSG00000013441	71	0	0.00	22	15	40.54	-	-	-
COL6A6	0	genome.wustl.edu	37	3	130290018	130290018	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	3	130290018	130290018	G	A	SNP	COL6A6	ENST00000358511	human	ensembl	69_37n	+1	known	missense	c.2758	p.D920N	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	41	0	0.00	3	20	86.96	-	-	-
CSN2	0	genome.wustl.edu	37	4	70823234	70823234	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	4	70823234	70823234	G	A	SNP	CSN2	ENST00000353151	human	ensembl	69_37n	-1	known	silent	c.433	p.L145	0.000	pfam_Casein,pirsf_Casein_beta	pfam_Casein,pirsf_Casein_beta	-	no_errors	CSN2	HGNC	ENSG00000135222	93	0	0.00	39	11	22.00	-	-	-
CYYR1	0	genome.wustl.edu	37	21	27840937	27840937	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	21	27840937	27840937	G	A	SNP	CYYR1	ENST00000299340	human	ensembl	69_37n	-1	known	silent	c.348	p.Y116	0.029	pfam_CYYR1	pfam_CYYR1	-	no_errors	CYYR1	HGNC	ENSG00000166265	37	0	0.00	20	6	23.08	-	-	-
EVC2	0	genome.wustl.edu	37	4	5692993	5692993	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	4	5692993	5692993	A	-	DEL	EVC2	ENST00000344408	human	ensembl	69_37n	-1	known	frame_shift_del	c.518	p.L173fs	0.965	NULL	pfam_EVC2-like	-	no_errors	EVC2	HGNC	ENSG00000173040	37	0	0.00	21	26	54.17	-	-	-
FGB	0	genome.wustl.edu	37	4	155490686	155490686	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	4	155490686	155490686	G	A	SNP	FGB	ENST00000302068	human	ensembl	69_37n	+1	known	missense	c.979	p.D327N	1.000	pfam_Fibrinogen_a/b/g_C,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	pfam_Fibrinogen_a/b/g_C,pfam_Fibrinogen_a/b/g_coil_dom,superfamily_Fibrinogen_a/b/g_C,smart_Fibrinogen_a/b/g_C	-	no_errors	FGB	HGNC	ENSG00000171564	37	0	0.00	22	10	31.25	-	-	-
GBX2	0	genome.wustl.edu	37	2	237074835	237074835	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	2	237074835	237074835	C	T	SNP	GBX2	ENST00000306318	human	ensembl	69_37n	-1	known	missense	c.769	p.E257K	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	GBX2	HGNC	ENSG00000168505	8	0	0.00	10	13	56.52	-	-	-
GOLGA6L6	0	genome.wustl.edu	37	15	20740459	20740461	+	In_Frame_Del	DEL	TCG	TCG	-			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	TCG	TCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	15	20740459	20740461	TCG	-	DEL	GOLGA6L6	ENST00000427390	human	ensembl	69_37n	-1	known	in_frame_del	c.1291_1289	p.AK430in_frame_delE	0.966:0.963:0.960	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405	22	0	0.00	6	5	41.67	-	-	-
IGHMBP2	0	genome.wustl.edu	37	11	68678993	68678993	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	11	68678993	68678993	C	T	SNP	IGHMBP2	ENST00000539224	human	ensembl	69_37n	+1	novel	missense	c.535	p.H179Y	1.000	NULL	NULL	-	no_errors	IGHMBP2	HGNC	ENSG00000132740	60	0	0.00	44	21	32.31	-	-	-
ISLR2	0	genome.wustl.edu	37	15	74425574	74425574	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	15	74425574	74425574	G	A	SNP	ISLR2	ENST00000361742	human	ensembl	69_37n	+1	known	missense	c.479	p.R160H	0.994	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Ig-like	-	no_errors	ISLR2	HGNC	ENSG00000167178	13	0	0.00	10	10	50.00	-	-	-
KNTC1	0	genome.wustl.edu	37	12	123073362	123073365	+	Frame_Shift_Del	DEL	AAGT	AAGT	-			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	AAGT	AAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	12	123073362	123073365	AAGT	-	DEL	KNTC1	ENST00000333479	human	ensembl	69_37n	+1	known	frame_shift_del	c.3998_3999	p.K1333fs	1.000:1.000	NULL	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	29	0	0.00	63	18	22.22	-	-	-
LINC00200	0	genome.wustl.edu	37	10	1205736	1205736	+	RNA	SNP	A	A	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	10	1205736	1205736	A	G	SNP	LINC00200	ENST00000425630	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.155	-	-	-	no_errors	LINC00200	HGNC	ENSG00000229205	8	0	0.00	20	6	23.08	-	-	-
LPA	0	genome.wustl.edu	37	6	161056225	161056225	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	6	161056225	161056225	G	A	SNP	LPA	ENST00000316300	human	ensembl	69_37n	-1	known	silent	c.1005	p.D335	0.005	superfamily_Kringle-like,smart_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_Peptidase_S1A_nudel,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	LPA	HGNC	ENSG00000198670	25	0	0.00	13	6	31.58	-	-	-
LRRIQ1	0	genome.wustl.edu	37	12	85515540	85515540	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	12	85515540	85515540	C	T	SNP	LRRIQ1	ENST00000393217	human	ensembl	69_37n	+1	known	missense	c.3443	p.S1148L	0.002	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	42	0	0.00	60	19	24.05	-	-	-
MTRR	0	genome.wustl.edu	37	5	7878145	7878145	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	5	7878145	7878145	A	C	SNP	MTRR	ENST00000264668	human	ensembl	69_37n	+1	known	missense	c.571	p.S191R	0.004	NULL	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin,pfscan_Flavodoxin/NO_synth	-	no_errors	MTRR	HGNC	ENSG00000124275	34	0	0.00	19	12	38.71	-	-	-
MX2	0	genome.wustl.edu	37	21	42770841	42770841	+	Silent	SNP	A	A	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	21	42770841	42770841	A	G	SNP	MX2	ENST00000330714	human	ensembl	69_37n	+1	known	silent	c.1167	p.L389	0.008	pfam_Dynamin_central	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,superfamily_CH-domain,smart_Dynamin_GTPase,smart_GED,prints_Dynamin	-	no_errors	MX2	HGNC	ENSG00000183486	70	0	0.00	33	35	51.47	-	-	-
MYOCD	0	genome.wustl.edu	37	17	12655755	12655755	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	17	12655755	12655755	C	T	SNP	MYOCD	ENST00000425538	human	ensembl	69_37n	+1	known	nonsense	c.1150	p.R384*	1.000	pfam_SAP_DNA-bd,smart_SAP_DNA-bd,pfscan_SAP_DNA-bd	pfam_RPEL_repeat,pfam_SAP_DNA-bd,smart_RPEL_repeat,smart_SAP_DNA-bd,pfscan_RPEL_repeat,pfscan_SAP_DNA-bd	-	no_errors	MYOCD	HGNC	ENSG00000141052	41	0	0.00	6	12	66.67	-	-	-
PCLO	0	genome.wustl.edu	37	7	82784867	82784867	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	7	82784867	82784867	G	A	SNP	PCLO	ENST00000333891	human	ensembl	69_37n	-1	known	nonsense	c.1090	p.Q364*	1.000	NULL	pfam_Znf_piccolo,pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	81	0	0.00	62	10	13.89	-	-	-
PLA2G4A	0	genome.wustl.edu	37	1	186934718	186934718	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	1	186934718	186934718	C	T	SNP	PLA2G4A	ENST00000367466	human	ensembl	69_37n	+1	known	missense	c.1757	p.P586L	1.000	pfam_LysoPLipase_cat_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_Ca-dep,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_LysoPLipase_cat_dom,pfscan_C2_membr_targeting,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4A	HGNC	ENSG00000116711	53	0	0.00	32	25	43.86	-	-	-
PLEKHG2	0	genome.wustl.edu	37	19	39905706	39905706	+	Missense_Mutation	SNP	G	G	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	19	39905706	39905706	G	C	SNP	PLEKHG2	ENST00000409794	human	ensembl	69_37n	+1	known	missense	c.184	p.G62R	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG2	HGNC	ENSG00000090924	9	0	0.00	9	7	43.75	-	-	-
PTPN9	0	genome.wustl.edu	37	15	75815503	75815503	+	Silent	SNP	T	T	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	15	75815503	75815503	T	C	SNP	PTPN9	ENST00000306726	human	ensembl	69_37n	-1	known	silent	c.381	p.V127	0.817	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_CRAL-TRIO_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_CRAL-bd_toc_tran	-	no_errors	PTPN9	HGNC	ENSG00000169410	63	0	0.00	24	8	25.00	-	-	-
RBBP7	0	genome.wustl.edu	37	X	16871848	16871848	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	X	16871848	16871848	C	G	SNP	RBBP7	ENST00000380087	human	ensembl	69_37n	-1	known	missense	c.715	p.E239Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Histone-bd_RBBP4,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RBBP7	HGNC	ENSG00000102054	92	0	0.00	41	10	19.61	-	-	-
RUNDC3A	0	genome.wustl.edu	37	17	42390802	42390802	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	17	42390802	42390802	G	A	SNP	RUNDC3A	ENST00000426726	human	ensembl	69_37n	+1	known	missense	c.389	p.R130Q	1.000	pfam_Run,smart_Run,pfscan_Run	pfam_Run,smart_Run,pfscan_Run	-	no_errors	RUNDC3A	HGNC	ENSG00000108309	52	0	0.00	32	4	11.11	-	-	-
SEC63	0	genome.wustl.edu	37	6	108218930	108218930	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	6	108218930	108218930	C	G	SNP	SEC63	ENST00000369002	human	ensembl	69_37n	-1	known	missense	c.1363	p.D455H	1.000	pfam_Sec63-dom,superfamily_ARM-type_fold,smart_Sec63-dom	pfam_Sec63-dom,pfam_DnaJ_N,superfamily_DnaJ_N,superfamily_ARM-type_fold,smart_DnaJ_N,smart_Sec63-dom,prints_Hsp_DnaJ,pfscan_DnaJ_N	-	no_errors	SEC63	HGNC	ENSG00000025796	128	0	0.00	44	16	26.67	-	-	-
SLC10A5	0	genome.wustl.edu	37	8	82606131	82606131	+	Silent	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	8	82606131	82606131	C	T	SNP	SLC10A5	ENST00000518568	human	ensembl	69_37n	-1	known	silent	c.1077	p.T359	0.976	NULL	pfam_BilAc/Na_symport	-	no_errors	SLC10A5	HGNC	ENSG00000253598	48	0	0.00	79	45	35.71	-	-	-
SUV420H1	0	genome.wustl.edu	37	11	67941347	67941347	+	Missense_Mutation	SNP	T	T	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	11	67941347	67941347	T	A	SNP	SUV420H1	ENST00000304363	human	ensembl	69_37n	-1	known	missense	c.577	p.S193C	1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H1	HGNC	ENSG00000110066	71	0	0.00	68	40	37.04	-	-	-
SYCE1	0	genome.wustl.edu	37	10	135373612	135373612	+	Missense_Mutation	SNP	A	A	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	10	135373612	135373612	A	C	SNP	SYCE1	ENST00000343131	human	ensembl	69_37n	-1	known	missense	c.119	p.V40G	1.000	NULL	NULL	-	no_errors	SYCE1	HGNC	ENSG00000171772	57	0	0.00	38	28	42.42	-	-	-
TDRD10	0	genome.wustl.edu	37	1	154493890	154493890	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	1	154493890	154493890	G	A	SNP	TDRD10	ENST00000368480	human	ensembl	69_37n	+1	known	missense	c.304	p.V102M	0.021	smart_RRM_dom,pfscan_RRM_dom	pfam_Tudor,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TDRD10	HGNC	ENSG00000163239	114	0	0.00	74	14	15.91	-	-	-
TDRKH	0	genome.wustl.edu	37	1	151751327	151751327	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	1	151751327	151751327	G	A	SNP	TDRKH	ENST00000368822	human	ensembl	69_37n	-1	known	silent	c.717	p.N239	0.000	NULL	pfam_KH_dom_type_1,pfam_Tudor,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	TDRKH	HGNC	ENSG00000182134	93	0	0.00	34	38	52.78	-	-	-
TFDP2	0	genome.wustl.edu	37	3	141671811	141671811	+	Missense_Mutation	SNP	A	A	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	3	141671811	141671811	A	G	SNP	TFDP2	ENST00000489671	human	ensembl	69_37n	-1	known	missense	c.1099	p.S367P	1.000	pirsf_Transcription_factor_DP_subgr	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcription_factor_DP_subgr	-	no_errors	TFDP2	HGNC	ENSG00000114126	54	0	0.00	33	4	10.81	-	-	-
TIPRL	0	genome.wustl.edu	37	1	168165856	168165856	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	1	168165856	168165856	G	A	SNP	TIPRL	ENST00000367833	human	ensembl	69_37n	+1	known	missense	c.588	p.M196I	1.000	pfam_TIP41-like	pfam_TIP41-like	-	no_errors	TIPRL	HGNC	ENSG00000143155	69	0	0.00	136	20	12.74	-	-	-
TNMD	0	genome.wustl.edu	37	X	99849000	99849000	+	Missense_Mutation	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	X	99849000	99849000	G	A	SNP	TNMD	ENST00000373031	human	ensembl	69_37n	+1	known	missense	c.289	p.D97N	1.000	pfam_BRICHOS_dom,pfscan_BRICHOS_dom	pfam_BRICHOS_dom,superfamily_Chitin-bd_1,pfscan_BRICHOS_dom	-	no_errors	TNMD	HGNC	ENSG00000000005	92	0	0.00	65	16	19.75	-	-	-
UBE2O	0	genome.wustl.edu	37	17	74401326	74401326	+	Silent	SNP	G	G	A			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	17	74401326	74401326	G	A	SNP	UBE2O	ENST00000319380	human	ensembl	69_37n	-1	known	silent	c.549	p.I183	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931	46	0	0.00	31	8	20.51	-	-	-
WDR44	0	genome.wustl.edu	37	X	117577583	117577583	+	Missense_Mutation	SNP	C	C	G			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	X	117577583	117577583	C	G	SNP	WDR44	ENST00000371848	human	ensembl	69_37n	+1	known	missense	c.2143	p.L715V	0.424	pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	WDR44	HGNC	ENSG00000131725	106	0	0.00	49	41	45.56	-	-	-
WDR91	0	genome.wustl.edu	37	7	134889109	134889109	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	7	134889109	134889109	G	-	DEL	WDR91	ENST00000354475	human	ensembl	69_37n	-1	known	frame_shift_del	c.802	p.Q268fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR91	HGNC	ENSG00000105875	54	0	0.00	15	2	11.76	-	-	-
WHSC1L1	0	genome.wustl.edu	37	8	38146045	38146045	+	Missense_Mutation	SNP	C	C	T			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	8	38146045	38146045	C	T	SNP	WHSC1L1	ENST00000317025	human	ensembl	69_37n	-1	known	missense	c.3461	p.R1154Q	0.995	smart_SET_dom,pfscan_SET_dom	pfam_PWWP,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	51	0	0.00	50	18	26.47	-	-	-
ZNF586	0	genome.wustl.edu	37	19	58291158	58291158	+	Silent	SNP	T	T	C			TCGA-AO-A1KS-01A-11D-A13L-09	TCGA-AO-A1KS-10A-01W-A14R-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	21074661-4b0f-4adc-b406-5801688a3ae9	460a9133-a189-42d2-acf0-ae61ca265d76	19	58291158	58291158	T	C	SNP	ZNF586	ENST00000396154	human	ensembl	69_37n	+1	known	silent	c.1203	p.Y401	0.287	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF586	HGNC	ENSG00000083828	25	0	0.00	54	46	46.00	-	-	-
