Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADCY3	0	genome.wustl.edu	37	2	25047329	25047329	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	2	25047329	25047329	C	T	SNP	ADCY3	ENST00000260600	human	ensembl	69_37n	-1	known	missense	c.2654	p.R885Q	1.000	smart_A/G_cyclase	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031	172	0	0.00	50	8	13.79	-	-	-
ANAPC5	0	genome.wustl.edu	37	12	121747576	121747576	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	12	121747576	121747576	G	A	SNP	ANAPC5	ENST00000261819	human	ensembl	69_37n	-1	known	missense	c.1984	p.R662C	0.999	NULL	smart_TPR_repeat	-	no_errors	ANAPC5	HGNC	ENSG00000089053	53	0	0.00	14	6	30.00	-	-	-
ANGEL2	0	genome.wustl.edu	37	1	213174228	213174228	+	Silent	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	1	213174228	213174228	C	A	SNP	ANGEL2	ENST00000366962	human	ensembl	69_37n	-1	known	silent	c.1161	p.R387	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	ANGEL2	HGNC	ENSG00000174606	298	0	0.00	24	4	14.29	-	-	-
ANKRD17	0	genome.wustl.edu	37	4	73957689	73957689	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	4	73957689	73957689	G	A	SNP	ANKRD17	ENST00000358602	human	ensembl	69_37n	-1	known	missense	c.5656	p.P1886S	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466	298	0	0.00	61	8	11.59	-	-	-
ARID5B	0	genome.wustl.edu	37	10	63662061	63662061	+	Silent	SNP	G	G	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	10	63662061	63662061	G	C	SNP	ARID5B	ENST00000279873	human	ensembl	69_37n	+1	known	silent	c.165	p.A55	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5B	HGNC	ENSG00000150347	201	0	0.00	28	17	37.78	-	-	-
BRCA2	0	genome.wustl.edu	37	13	32921032	32921032	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	13	32921032	32921032	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	69_37n	+1	known	missense	c.7006	p.R2336C	0.118	pirsf_DNA_recomb/repair_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold-like,pirsf_DNA_recomb/repair_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	461	0	0.00	64	11	14.67	-	-	-
BRIX1	0	genome.wustl.edu	37	5	34925371	34925371	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	5	34925371	34925371	G	C	SNP	BRIX1	ENST00000336767	human	ensembl	69_37n	+1	known	missense	c.833	p.R278T	0.936	NULL	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	-	no_errors	BRIX1	HGNC	ENSG00000113460	81	0	0.00	9	7	43.75	-	-	-
CCNB3	0	genome.wustl.edu	37	X	50052008	50052008	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	X	50052008	50052008	C	-	DEL	CCNB3	ENST00000276014	human	ensembl	69_37n	+1	known	frame_shift_del	c.839	p.H281fs	0.002	NULL	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	88	0	0.00	17	2	10.53	-	-	-
CDK19	0	genome.wustl.edu	37	6	110948277	110948277	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	6	110948277	110948277	C	T	SNP	CDK19	ENST00000368911	human	ensembl	69_37n	-1	known	missense	c.718	p.D240N	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	CDK19	HGNC	ENSG00000155111	407	0	0.00	47	23	32.86	-	-	-
CDS1	0	genome.wustl.edu	37	4	85525478	85525478	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	4	85525478	85525478	G	C	SNP	CDS1	ENST00000295887	human	ensembl	69_37n	+1	known	missense	c.200	p.R67T	1.000	pirsf_PC_Trfase_euk	pfam_PC_trans,pirsf_PC_Trfase_euk	-	no_errors	CDS1	HGNC	ENSG00000163624	367	0	0.00	42	13	23.64	-	-	-
CHD3	0	genome.wustl.edu	37	17	7796726	7796726	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	17	7796726	7796726	C	T	SNP	CHD3	ENST00000330494	human	ensembl	69_37n	+1	known	missense	c.632	p.A211V	1.000	superfamily_HMG_superfamily	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	54	0	0.00	21	7	25.00	-	-	-
CMYA5	0	genome.wustl.edu	37	5	79084809	79084809	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	5	79084809	79084809	C	G	SNP	CMYA5	ENST00000446378	human	ensembl	69_37n	+1	known	missense	c.11571	p.I3857M	0.993	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	304	0	0.00	26	5	16.13	-	-	-
COL12A1	0	genome.wustl.edu	37	6	75893090	75893090	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	6	75893090	75893090	T	G	SNP	COL12A1	ENST00000322507	human	ensembl	69_37n	-1	known	missense	c.1567	p.M523L	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	199	0	0.00	37	9	19.57	-	-	-
COL1A2	0	genome.wustl.edu	37	7	94056944	94056944	+	Silent	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	7	94056944	94056944	C	A	SNP	COL1A2	ENST00000297268	human	ensembl	69_37n	+1	known	silent	c.3273	p.P1091	0.998	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,superfamily_Fibrinogen_a/b/g_C,smart_Fib_collagen_C	-	no_errors	COL1A2	HGNC	ENSG00000164692	134	0	0.00	29	10	25.64	-	-	-
CYP2A13	0	genome.wustl.edu	37	19	41594877	41594877	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	19	41594877	41594877	C	T	SNP	CYP2A13	ENST00000330436	human	ensembl	69_37n	+1	known	missense	c.224	p.P75L	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838	137	0	0.00	53	10	15.87	-	-	-
DMXL2	0	genome.wustl.edu	37	15	51766785	51766785	+	Nonstop_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	15	51766785	51766785	C	G	SNP	DMXL2	ENST00000560891	human	ensembl	69_37n	-1	novel	nonstop	c.1343	p.*448S	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	DMXL2	HGNC	ENSG00000104093	215	0	0.00	21	9	30.00	-	-	-
DOCK11	0	genome.wustl.edu	37	X	117679333	117679333	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	X	117679333	117679333	A	T	SNP	DOCK11	ENST00000276202	human	ensembl	69_37n	+1	known	missense	c.440	p.D147V	1.000	NULL	pfam_DOCK,pfam_DUF3398,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	322	0	0.00	43	15	25.86	-	-	-
DUOX2	0	genome.wustl.edu	37	15	45392973	45392973	+	Silent	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	15	45392973	45392973	C	G	SNP	DUOX2	ENST00000389039	human	ensembl	69_37n	-1	known	silent	c.2985	p.L995	0.931	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF-hand,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_Ca-bd,prints_Haem_peroxidase_animal_subgr,prints_Recoverin,pfscan_EF_HAND_2,pfscan_Haem_peroxidase_animal	-	no_errors	DUOX2	HGNC	ENSG00000140279	345	0	0.00	37	21	36.21	-	-	-
DYNC1I1	0	genome.wustl.edu	37	7	95668673	95668673	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	7	95668673	95668673	C	A	SNP	DYNC1I1	ENST00000324972	human	ensembl	69_37n	+1	known	missense	c.1500	p.D500E	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I1	HGNC	ENSG00000158560	166	0	0.00	44	6	12.00	-	-	-
IGHV3-7	0	genome.wustl.edu	37	14	106518523	106518523	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	14	106518523	106518523	C	A	SNP	IGHV3-7	ENST00000390598	human	ensembl	69_37n	-1	known	missense	c.228	p.E76D	0.000	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-7	HGNC	ENSG00000211938	441	1	0.23	113	24	17.52	-	-	-
IGSF10	0	genome.wustl.edu	37	3	151160895	151160895	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	3	151160895	151160895	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	69_37n	-1	known	missense	c.5840	p.S1947F	0.999	pfam_Ig_I-set,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF10	HGNC	ENSG00000152580	274	0	0.00	60	19	24.05	-	-	-
KCNN3	0	genome.wustl.edu	37	1	154842243	154842243	+	Silent	SNP	A	A	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	1	154842243	154842243	A	C	SNP	KCNN3	ENST00000271915	human	ensembl	69_37n	-1	known	silent	c.198	p.L66	0.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_Ion_trans_2,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	21	0	0.00	22	6	21.43	-	-	-
LACTB2	0	genome.wustl.edu	37	8	71581315	71581315	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	8	71581315	71581315	C	G	SNP	LACTB2	ENST00000276590	human	ensembl	69_37n	-1	known	missense	c.41	p.R14P	1.000	NULL	pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	LACTB2	HGNC	ENSG00000147592	20	0	0.00	6	4	40.00	-	-	-
LCTL	0	genome.wustl.edu	37	15	66853439	66853439	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	15	66853439	66853439	C	-	DEL	LCTL	ENST00000341509	human	ensembl	69_37n	-1	known	frame_shift_del	c.610	p.A204fs	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCTL	HGNC	ENSG00000188501	67	0	0.00	16	2	11.11	-	-	-
LENG1	0	genome.wustl.edu	37	19	54660722	54660722	+	Silent	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	19	54660722	54660722	G	A	SNP	LENG1	ENST00000222224	human	ensembl	69_37n	-1	known	silent	c.354	p.G118	1.000	NULL	NULL	-	no_errors	LENG1	HGNC	ENSG00000105617	80	0	0.00	30	4	11.76	-	-	-
LPCAT1	0	genome.wustl.edu	37	5	1463930	1463930	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	5	1463930	1463930	C	T	SNP	LPCAT1	ENST00000283415	human	ensembl	69_37n	-1	known	missense	c.1441	p.E481K	0.472	smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	pfam_Acyltransferase,smart_Acyltransferase,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	LPCAT1	HGNC	ENSG00000153395	198	0	0.00	76	27	26.21	-	-	-
MC5R	0	genome.wustl.edu	37	18	13826448	13826448	+	Silent	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	18	13826448	13826448	G	A	SNP	MC5R	ENST00000324750	human	ensembl	69_37n	+1	known	silent	c.684	p.A228	0.998	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Melancort_rcpt_5	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Melancort_rcpt_5,prints_Melcrt_ACTH_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC5R	HGNC	ENSG00000176136	166	0	0.00	61	13	17.57	-	-	-
MPP2	0	genome.wustl.edu	37	17	41960570	41960570	+	Splice_Site	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	17	41960570	41960570	C	A	SNP	MPP2	ENST00000461854	human	ensembl	69_37n	-1	known	splice_site	c.375+1	e4+1	1.000	-	-	-	no_errors	MPP2	HGNC	ENSG00000108852	25	0	0.00	13	5	27.78	-	-	-
MSR1	0	genome.wustl.edu	37	8	16007748	16007748	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	8	16007748	16007748	C	-	DEL	MSR1	ENST00000262101	human	ensembl	69_37n	-1	known	frame_shift_del	c.971	p.G324fs	0.784	pfam_Collagen	pfam_Srcr_rcpt,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_Srcr_rcpt,pfscan_Srcr_rcpt	-	no_errors	MSR1	HGNC	ENSG00000038945	58	0	0.00	16	2	11.11	-	-	-
MTCP1NB	0	genome.wustl.edu	37	X	154290173	154290173	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	X	154290173	154290173	G	T	SNP	MTCP1NB	ENST00000369479	human	ensembl	69_37n	-1	known	nonsense	c.152	p.S51*	1.000	pfam_MTCP1,superfamily_MTCP1	pfam_MTCP1,superfamily_MTCP1	-	no_errors	MTCP1NB	HGNC	ENSG00000182712	408	1	0.24	51	12	19.05	-	-	-
MYH7	0	genome.wustl.edu	37	14	23894170	23894170	+	Missense_Mutation	SNP	C	C	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	14	23894170	23894170	C	A	SNP	MYH7	ENST00000355349	human	ensembl	69_37n	-1	known	missense	c.2487	p.W829C	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	223	0	0.00	33	12	26.67	-	-	-
MYOM3	0	genome.wustl.edu	37	1	24402671	24402671	+	Silent	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	1	24402671	24402671	G	A	SNP	MYOM3	ENST00000330966	human	ensembl	69_37n	-1	known	silent	c.2682	p.P894	0.003	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	MYOM3	HGNC	ENSG00000142661	80	0	0.00	30	15	33.33	-	-	-
NEURL4	0	genome.wustl.edu	37	17	7225003	7225003	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	17	7225003	7225003	G	A	SNP	NEURL4	ENST00000571887	human	ensembl	69_37n	-1	novel	nonsense	c.2863	p.Q955*	0.948	smart_Neu_Z,pfscan_Neu_Z	pfam_Neu_Z,superfamily_ConA-like_lec_gl,smart_Neu_Z,pfscan_Neu_Z	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NEURL4	HGNC	ENSG00000215041	34	0	0.00	11	4	26.67	-	-	-
NLRP12	0	genome.wustl.edu	37	19	54313970	54313970	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	19	54313970	54313970	C	-	DEL	NLRP12	ENST00000391773	human	ensembl	69_37n	-1	known	frame_shift_del	c.943	p.E315fs	0.995	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405	52	0	0.00	14	2	12.50	-	-	-
OSR2	0	genome.wustl.edu	37	8	99963751	99963751	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	8	99963751	99963751	C	T	SNP	OSR2	ENST00000457907	human	ensembl	69_37n	+1	known	missense	c.1124	p.S375F	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OSR2	HGNC	ENSG00000164920	98	0	0.00	15	11	42.31	-	-	-
PCDHGA1	0	genome.wustl.edu	37	5	140711613	140711613	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	5	140711613	140711613	G	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	69_37n	+1	known	missense	c.1362	p.Q454H	0.001	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	344	0	0.00	42	12	22.22	-	-	-
PDGFB	0	genome.wustl.edu	37	22	39626161	39626161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	22	39626161	39626161	C	-	DEL	PDGFB	ENST00000331163	human	ensembl	69_37n	-1	known	frame_shift_del	c.529	p.A177fs	0.995	pfam_PD_growth_factor,smart_PD_growth_factor,pfscan_PD_growth_factor	pfam_PD_growth_factor,pfam_PDGF_N,smart_PD_growth_factor,pfscan_PD_growth_factor	-	no_errors	PDGFB	HGNC	ENSG00000100311	45	0	0.00	13	2	13.33	-	-	-
PDRG1	0	genome.wustl.edu	37	20	30534308	30534308	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	20	30534308	30534308	C	G	SNP	PDRG1	ENST00000202017	human	ensembl	69_37n	-1	known	missense	c.310	p.E104Q	1.000	pfam_PFD_beta-like,superfamily_Prefoldin	pfam_PFD_beta-like,superfamily_Prefoldin	-	no_errors	PDRG1	HGNC	ENSG00000088356	283	0	0.00	92	25	21.37	-	-	-
PDXDC1	0	genome.wustl.edu	37	16	15112739	15112739	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	16	15112739	15112739	C	T	SNP	PDXDC1	ENST00000396410	human	ensembl	69_37n	+1	known	missense	c.1006	p.L336F	1.000	superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	PDXDC1	HGNC	ENSG00000179889	1013	0	0.00	208	35	14.40	-	-	-
PKDREJ	0	genome.wustl.edu	37	22	46654720	46654720	+	Silent	SNP	A	A	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	22	46654720	46654720	A	C	SNP	PKDREJ	ENST00000253255	human	ensembl	69_37n	-1	known	silent	c.4500	p.P1500	0.000	NULL	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_LipOase_LH2,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_LipOase_LH2,pfscan_LipOase_LH2,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943	417	0	0.00	80	38	32.20	-	-	-
PRIC285	0	genome.wustl.edu	37	20	62193250	62193251	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	20	62193250	62193251	-	G	INS	PRIC285	ENST00000467148	human	ensembl	69_37n	-1	known	frame_shift_ins	c.6617_6616	p.R2206fs	0.000:0.000	NULL	pfam_RNase_II/R,smart_RNase_II/R	-	no_errors	RP4-697K14.7	Clone_based_vega_gene	ENSG00000130589	9	0	0.00	2	2	50.00	-	-	-
PRKD1	0	genome.wustl.edu	37	14	30095732	30095732	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	14	30095732	30095732	C	G	SNP	PRKD1	ENST00000331968	human	ensembl	69_37n	-1	known	missense	c.1756	p.D586H	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304	185	0	0.00	22	5	18.52	-	-	-
PSMD7	0	genome.wustl.edu	37	16	74334086	74334086	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	16	74334086	74334086	G	A	SNP	PSMD7	ENST00000219313	human	ensembl	69_37n	+1	known	missense	c.148	p.V50I	1.000	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	pfam_JAB1_Mov34_MPN_PAD1,smart_JAB1_Mov34_MPN_PAD1	-	no_errors	PSMD7	HGNC	ENSG00000103035	325	0	0.00	82	15	15.46	-	-	-
RAG1	0	genome.wustl.edu	37	11	36597453	36597453	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	11	36597453	36597453	G	A	SNP	RAG1	ENST00000299440	human	ensembl	69_37n	+1	known	missense	c.2599	p.D867N	1.000	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349	178	0	0.00	57	11	16.18	-	-	-
RAMP3	0	genome.wustl.edu	37	7	45222967	45222967	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	7	45222967	45222967	G	-	DEL	RAMP3	ENST00000242249	human	ensembl	69_37n	+1	known	frame_shift_del	c.403	p.G135fs	0.034	pfam_RAMP	pfam_RAMP	-	no_errors	RAMP3	HGNC	ENSG00000122679	33	0	0.00	4	2	33.33	-	-	-
RFX6	0	genome.wustl.edu	37	6	117252535	117252535	+	Missense_Mutation	SNP	T	T	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	6	117252535	117252535	T	C	SNP	RFX6	ENST00000332958	human	ensembl	69_37n	+1	known	missense	c.2653	p.C885R	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX6	HGNC	ENSG00000185002	370	0	0.00	67	10	12.99	-	-	-
RSPH10B2	0	genome.wustl.edu	37	7	6820992	6820992	+	Missense_Mutation	SNP	A	A	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	7	6820992	6820992	A	G	SNP	RSPH10B2	ENST00000297186	human	ensembl	69_37n	+1	known	missense	c.1643	p.Y548C	0.009	NULL	pfam_MORN,smart_MORN	-	no_errors	RSPH10B2	HGNC	ENSG00000169402	59	0	0.00	9	2	18.18	-	-	-
SLC7A3	0	genome.wustl.edu	37	X	70147461	70147461	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	X	70147461	70147461	G	-	DEL	SLC7A3	ENST00000298085	human	ensembl	69_37n	-1	known	frame_shift_del	c.1056	p.M353fs	0.997	pfam_AA-permease_dom,pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	pfam_AA-permease_dom,pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	-	no_errors	SLC7A3	HGNC	ENSG00000165349	65	0	0.00	13	2	13.33	-	-	-
SPATA1	0	genome.wustl.edu	37	1	85018772	85018772	+	RNA	DEL	A	A	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	1	85018772	85018772	A	-	DEL	SPATA1	ENST00000460286	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SPATA1	HGNC	ENSG00000122432	71	0	0.00	8	3	21.43	-	-	-
TAF7	0	genome.wustl.edu	37	5	140699073	140699073	+	Missense_Mutation	SNP	C	C	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	5	140699073	140699073	C	G	SNP	TAF7	ENST00000313368	human	ensembl	69_37n	-1	known	missense	c.539	p.R180P	1.000	NULL	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7	HGNC	ENSG00000178913	319	0	0.00	50	9	15.25	-	-	-
TAPT1	0	genome.wustl.edu	37	4	16177795	16177795	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	4	16177795	16177795	C	T	SNP	TAPT1	ENST00000405303	human	ensembl	69_37n	-1	known	missense	c.1054	p.V352M	1.000	pfam_Membrane_Tatp1/CMV_rcpt	pfam_Membrane_Tatp1/CMV_rcpt	-	no_errors	TAPT1	HGNC	ENSG00000169762	380	0	0.00	26	14	34.15	-	-	-
TP53	0	genome.wustl.edu	37	17	7577130	7577130	+	Missense_Mutation	SNP	A	A	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	17	7577130	7577130	A	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.808	p.F270I	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	156	0	0.00	23	13	36.11	-	-	-
TRBV4-2	0	genome.wustl.edu	37	7	142045705	142045705	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	7	142045705	142045705	G	C	SNP	TRBV4-2	ENST00000390392	human	ensembl	69_37n	+1	known	missense	c.233	p.S78T	0.000	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon:bad_bp_length_for_coding_region	TRBV4-2	HGNC	ENSG00000211745	334	0	0.00	82	24	22.64	-	-	-
TRPM6	0	genome.wustl.edu	37	9	77455078	77455078	+	Missense_Mutation	SNP	G	G	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	9	77455078	77455078	G	A	SNP	TRPM6	ENST00000451710	human	ensembl	69_37n	-1	known	missense	c.406	p.P136S	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	332	0	0.00	42	15	26.32	-	-	-
TSR3	0	genome.wustl.edu	37	16	1400125	1400125	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	16	1400125	1400125	C	T	SNP	TSR3	ENST00000007390	human	ensembl	69_37n	-1	known	missense	c.637	p.E213K	1.000	pfam_DUF367	pfam_DUF367,pfam_RNaseL-inhib_metal-bd_dom	-	no_errors	TSR3	HGNC	ENSG00000007520	47	0	0.00	18	11	37.93	-	-	-
TTC39B	0	genome.wustl.edu	37	9	15210087	15210087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	9	15210087	15210087	T	-	DEL	TTC39B	ENST00000512701	human	ensembl	69_37n	-1	known	frame_shift_del	c.690	p.E231fs	1.000	pfam_OMP_IML2_mit/TPR_39	pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat	-	no_errors	TTC39B	HGNC	ENSG00000155158	134	0	0.00	8	2	20.00	-	-	-
UFL1	0	genome.wustl.edu	37	6	97001226	97001226	+	Missense_Mutation	SNP	G	G	C			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	6	97001226	97001226	G	C	SNP	UFL1	ENST00000369278	human	ensembl	69_37n	+1	known	missense	c.2232	p.K744N	1.000	NULL	pfam_E3_UFM1_ligase_1	-	no_errors	UFL1	HGNC	ENSG00000014123	511	0	0.00	68	10	12.82	-	-	-
USP32	0	genome.wustl.edu	37	17	58275782	58275782	+	Silent	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	17	58275782	58275782	C	T	SNP	USP32	ENST00000300896	human	ensembl	69_37n	-1	known	silent	c.3273	p.L1091	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Pept_C19_DUSP,smart_EF_hand_Ca-bd,smart_Pept_C19_DUSP,pfscan_EF_HAND_2,pfscan_Peptidase_C19,prints_Recoverin	-	no_errors	USP32	HGNC	ENSG00000170832	418	0	0.00	69	16	18.82	-	-	-
USP47	0	genome.wustl.edu	37	11	11964198	11964198	+	Missense_Mutation	SNP	G	G	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	11	11964198	11964198	G	T	SNP	USP47	ENST00000399455	human	ensembl	69_37n	+1	known	missense	c.2690	p.S897I	1.000	NULL	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP47	HGNC	ENSG00000170242	125	0	0.00	23	4	14.81	-	-	-
ZDBF2	0	genome.wustl.edu	37	2	207174888	207174888	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	2	207174888	207174888	C	-	DEL	ZDBF2	ENST00000374423	human	ensembl	69_37n	+1	known	frame_shift_del	c.5636	p.A1879fs	0.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	161	0	0.00	27	7	20.00	-	-	-
ZNF330	0	genome.wustl.edu	37	4	142151378	142151378	+	Missense_Mutation	SNP	T	T	A			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	4	142151378	142151378	T	A	SNP	ZNF330	ENST00000262990	human	ensembl	69_37n	+1	known	missense	c.477	p.F159L	1.000	pfam_NOA36	pfam_NOA36	-	no_errors	ZNF330	HGNC	ENSG00000109445	483	0	0.00	64	10	13.51	-	-	-
ZNF582	0	genome.wustl.edu	37	19	56896091	56896091	+	Missense_Mutation	SNP	C	C	T			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	19	56896091	56896091	C	T	SNP	ZNF582	ENST00000301310	human	ensembl	69_37n	-1	known	missense	c.695	p.C232Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF582	HGNC	ENSG00000018869	229	0	0.00	30	11	26.83	-	-	-
ZNF675	0	genome.wustl.edu	37	19	23836780	23836780	+	Missense_Mutation	SNP	T	T	G			TCGA-AR-A1AI-01A-11D-A12Q-09	TCGA-AR-A1AI-10A-01D-A12Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	842846ea-881c-4d79-88d2-fc1703c58350	e1aef6e6-ad91-48f0-8d2e-52c680cd81f8	19	23836780	23836780	T	G	SNP	ZNF675	ENST00000359788	human	ensembl	69_37n	-1	known	missense	c.955	p.K319Q	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372	202	0	0.00	16	6	27.27	-	-	-
