Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ACOX3	0	genome.wustl.edu	37	4	8401327	8401327	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	4	8401327	8401327	T	A	SNP	ACOX3	ENST00000356406	human	ensembl	69_37n	-1	known	missense	c.829	p.M277L	0.005	superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_Oxase/DH_1,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008	21	0	0.00	50	31	38.27	-	-	-
C9orf84	0	genome.wustl.edu	37	9	114518627	114518627	+	Silent	SNP	T	T	C			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	9	114518627	114518627	T	C	SNP	C9orf84	ENST00000318737	human	ensembl	69_37n	-1	known	silent	c.648	p.E216	0.994	NULL	superfamily_RuvA_2-like	-	no_errors	C9orf84	HGNC	ENSG00000165181	300	0	0.00	54	7	11.48	-	-	-
CASP8	0	genome.wustl.edu	37	2	202141634	202141634	+	Nonsense_Mutation	SNP	G	G	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	2	202141634	202141634	G	T	SNP	CASP8	ENST00000358485	human	ensembl	69_37n	+1	known	nonsense	c.922	p.E308*	0.123	pfam_Pept_C14_cat,superfamily_DEATH-like,smart_Pept_C14_p45_core,pfscan_Pept_C14_ICE_p20	pfam_DED,pfam_Pept_C14_cat,superfamily_DEATH-like,smart_DED,smart_Pept_C14_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	149	0	0.00	61	24	27.91	-	-	-
CES1	0	genome.wustl.edu	37	16	55857523	55857523	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	16	55857523	55857523	C	A	SNP	CES1	ENST00000360526	human	ensembl	69_37n	-1	known	missense	c.478	p.A160S	1.000	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	128	0	0.00	110	18	13.95	-	-	-
COL6A5	0	genome.wustl.edu	37	3	130159662	130159662	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	3	130159662	130159662	G	A	SNP	COL6A5	ENST00000512836	human	ensembl	69_37n	+1	putative	missense	c.1234	p.G412S	0.017	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	COL6A5	HGNC	ENSG00000172752	162	0	0.00	36	63	63.64	-	-	-
DOCK8	0	genome.wustl.edu	37	9	377199	377199	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	9	377199	377199	G	T	SNP	DOCK8	ENST00000453981	human	ensembl	69_37n	+1	known	missense	c.2428	p.A810S	0.999	NULL	pfam_DOCK,pfam_DUF3398,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	8	0	0.00	14	11	44.00	-	-	-
FREM2	0	genome.wustl.edu	37	13	39435627	39435627	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	13	39435627	39435627	C	T	SNP	FREM2	ENST00000280481	human	ensembl	69_37n	+1	known	missense	c.7579	p.R2527C	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	98	0	0.00	31	21	40.38	-	-	-
GOLGA8DP	0	genome.wustl.edu	37	15	22709627	22709627	+	Splice_Site	SNP	C	C	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	15	22709627	22709627	C	T	SNP	GOLGA8DP	ENST00000314246	human	ensembl	69_37n	-1	known	splice_site	c.NULL	NULL	0.884	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182	159	0	0.00	48	17	26.15	-	-	-
HDAC1	0	genome.wustl.edu	37	1	32768220	32768220	+	Splice_Site	SNP	A	A	G			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	1	32768220	32768220	A	G	SNP	HDAC1	ENST00000373548	human	ensembl	69_37n	+1	known	splice_site	c.50-2	e2-2	1.000	-	-	-	no_errors	HDAC1	HGNC	ENSG00000116478	103	0	0.00	28	20	40.82	-	-	-
HEATR8	0	genome.wustl.edu	37	1	55119090	55119090	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	1	55119090	55119090	G	T	SNP	HEATR8	ENST00000421030	human	ensembl	69_37n	+1	known	missense	c.491	p.G164V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	HEATR8	HGNC	ENSG00000184313	85	0	0.00	45	14	23.73	-	-	-
KCND1	0	genome.wustl.edu	37	X	48823411	48823411	+	Silent	SNP	C	C	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	X	48823411	48823411	C	T	SNP	KCND1	ENST00000218176	human	ensembl	69_37n	-1	known	silent	c.1224	p.V408	0.758	pfam_Ion_trans_2,prints_K_chnl,prints_K_chnl_volt-dep_Kv9	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND1	HGNC	ENSG00000102057	53	0	0.00	55	57	50.89	-	-	-
KCNN3	0	genome.wustl.edu	37	1	154842199	154842200	+	In_Frame_Ins	INS	-	-	GCT			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	1	154842199	154842200	-	GCT	INS	KCNN3	ENST00000271915	human	ensembl	69_37n	-1	known	in_frame_ins	c.242_241	p.81in_frame_insQ	0.748:0.982	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_Ion_trans_2,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	23	0	0.00	94	14	12.96	-	-	-
MLL3	0	genome.wustl.edu	37	7	151845739	151845739	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	7	151845739	151845739	C	A	SNP	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	missense	c.13444	p.D4482Y	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	76	0	0.00	42	19	31.15	-	-	-
MUC12	0	genome.wustl.edu	37	7	100641631	100641631	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	7	100641631	100641631	C	T	SNP	MUC12	ENST00000379442	human	ensembl	69_37n	+1	known	missense	c.8216	p.T2739I	0.000	NULL	pfam_SEA	-	no_errors	MUC12	HGNC	ENSG00000205277	11	0	0.00	22	8	26.67	-	-	-
MUC16	0	genome.wustl.edu	37	19	9056515	9056515	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	19	9056515	9056515	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.30931	p.G10311S	0.022	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	71	0	0.00	68	24	26.09	-	-	-
PIP4K2C	0	genome.wustl.edu	37	12	57989795	57989795	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	12	57989795	57989795	A	G	SNP	PIP4K2C	ENST00000354947	human	ensembl	69_37n	+1	known	missense	c.494	p.N165S	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2C	HGNC	ENSG00000166908	125	0	0.00	100	23	18.55	-	-	-
PRKRIR	0	genome.wustl.edu	37	11	76062566	76062566	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	11	76062566	76062566	G	A	SNP	PRKRIR	ENST00000260045	human	ensembl	69_37n	-1	known	missense	c.1628	p.A543V	1.000	superfamily_RNaseH-like_dom	pfam_Znf_C2CH,pfam_HATC,superfamily_RNaseH-like_dom,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	PRKRIR	HGNC	ENSG00000137492	49	0	0.00	20	9	31.03	-	-	-
SRCIN1	0	genome.wustl.edu	37	17	36719585	36719585	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	17	36719585	36719585	G	C	SNP	SRCIN1	ENST00000264659	human	ensembl	69_37n	-1	known	missense	c.714	p.N238K	1.000	pfam_AIP3_C	pfam_AIP3_C	-	no_errors	SRCIN1	HGNC	ENSG00000017373	10	0	0.00	36	25	40.32	-	-	-
TNNI3	0	genome.wustl.edu	37	19	55666131	55666131	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	19	55666131	55666131	T	C	SNP	TNNI3	ENST00000344887	human	ensembl	69_37n	-1	known	missense	c.350	p.K117R	1.000	pfam_Troponin	pfam_Troponin,pfam_Troponin-I_N	-	no_errors	TNNI3	HGNC	ENSG00000129991	129	1	0.77	90	41	31.06	-	-	-
TTN	0	genome.wustl.edu	37	2	179435537	179435537	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	2	179435537	179435537	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.67618	p.P22540S	1.000	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	320	0	0.00	113	14	11.02	-	-	-
ZFC3H1	0	genome.wustl.edu	37	12	72008334	72008334	+	Missense_Mutation	SNP	T	T	A			TCGA-B6-A0RP-01A-21D-A099-09	TCGA-B6-A0RP-10A-01D-A099-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	efbdb449-b885-44bb-9054-9e97d6603cad	d989e1d9-e13d-4767-b907-b450b745a00e	12	72008334	72008334	T	A	SNP	ZFC3H1	ENST00000378743	human	ensembl	69_37n	-1	known	missense	c.5507	p.N1836I	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858	151	0	0.00	60	16	21.05	-	-	-
