Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ALOXE3	0	genome.wustl.edu	37	17	8011882	8011882	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	17	8011882	8011882	A	C	SNP	ALOXE3	ENST00000318227	human	ensembl	69_37n	-1	known	missense	c.1984	p.Y662D	1.000	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_LipOase_LH2,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2,prints_LipOase_C	-	no_errors	ALOXE3	HGNC	ENSG00000179148	14	0	0.00	17	7	29.17	-	-	-
AP3B1	0	genome.wustl.edu	37	5	77523987	77523987	+	Missense_Mutation	SNP	G	G	C			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	5	77523987	77523987	G	C	SNP	AP3B1	ENST00000255194	human	ensembl	69_37n	-1	known	missense	c.356	p.T119S	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_bsu	-	no_errors	AP3B1	HGNC	ENSG00000132842	68	0	0.00	33	37	52.86	-	-	-
ATP11C	0	genome.wustl.edu	37	X	138845570	138845570	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	X	138845570	138845570	C	A	SNP	ATP11C	ENST00000327569	human	ensembl	69_37n	-1	known	missense	c.2408	p.R803I	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP11C	HGNC	ENSG00000101974	132	0	0.00	71	54	43.20	-	-	-
BHMT	0	genome.wustl.edu	37	5	78415130	78415130	+	Missense_Mutation	SNP	A	A	C			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	5	78415130	78415130	A	C	SNP	BHMT	ENST00000274353	human	ensembl	69_37n	+1	known	missense	c.215	p.Q72P	1.000	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_Betaine-hCys_S-MeTrfase_BHMT,pfscan_S_MeTrfase	-	no_errors	BHMT	HGNC	ENSG00000145692	34	0	0.00	42	5	10.64	-	-	-
CENPL	0	genome.wustl.edu	37	1	173780350	173780350	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	173780350	173780350	G	A	SNP	CENPL	ENST00000356198	human	ensembl	69_37n	-1	known	nonsense	c.88	p.R30*	0.973	NULL	NULL	-	no_errors	CENPL	HGNC	ENSG00000120334	55	0	0.00	47	19	28.79	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16952920	16952920	+	RNA	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	16952920	16952920	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	10	0	0.00	17	4	19.05	-	-	-
DENND2C	0	genome.wustl.edu	37	1	115168327	115168327	+	Silent	SNP	A	A	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	115168327	115168327	A	G	SNP	DENND2C	ENST00000393274	human	ensembl	69_37n	-1	known	silent	c.279	p.S93	0.805	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2C	HGNC	ENSG00000175984	147	0	0.00	141	17	10.76	-	-	-
DENND4B	0	genome.wustl.edu	37	1	153912954	153912954	+	Silent	SNP	C	C	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	153912954	153912954	C	T	SNP	DENND4B	ENST00000361217	human	ensembl	69_37n	-1	known	silent	c.1455	p.P485	0.008	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	15	0	0.00	17	15	46.88	-	-	-
FAT1	0	genome.wustl.edu	37	4	187539727	187539727	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	4	187539727	187539727	G	T	SNP	FAT1	ENST00000441802	human	ensembl	69_37n	-1	known	missense	c.8013	p.F2671L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_dom,pfam_EGF-like_Ca-bd,superfamily_ConA-like_lec_gl,superfamily_Cadherin-like,smart_Cadherin,smart_EGF-like,smart_Laminin_G,smart_EGF-like_Ca-bd,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	32	0	0.00	29	29	50.00	-	-	-
FERMT2	0	genome.wustl.edu	37	14	53326539	53326539	+	RNA	DEL	T	T	-			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	14	53326539	53326539	T	-	DEL	FERMT2	ENST00000557255	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.120	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	23	0	0.00	34	4	10.26	-	-	-
HSD17B7P2	0	genome.wustl.edu	37	10	38645343	38645343	+	RNA	SNP	C	C	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	10	38645343	38645343	C	T	SNP	HSD17B7P2	ENST00000494540	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HSD17B7P2	HGNC	ENSG00000099251	31	0	0.00	40	5	11.11	-	-	-
KCND3	0	genome.wustl.edu	37	1	112525097	112525097	+	Silent	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	112525097	112525097	G	A	SNP	KCND3	ENST00000315987	human	ensembl	69_37n	-1	known	silent	c.252	p.F84	0.747	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	pfam_K_chnl_volt-dep_Kv4_C,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Shal-type,pfam_Ion_trans_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.3,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND3	HGNC	ENSG00000171385	11	0	0.00	4	7	63.64	-	-	-
KHSRP	0	genome.wustl.edu	37	19	6416411	6416411	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	19	6416411	6416411	A	G	SNP	KHSRP	ENST00000398148	human	ensembl	69_37n	-1	known	missense	c.1496	p.L499P	1.000	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,pfam_DUF1897,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHSRP	HGNC	ENSG00000088247	9	0	0.00	3	5	62.50	-	-	-
MAT2A	0	genome.wustl.edu	37	2	85769379	85769379	+	Silent	SNP	A	A	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	2	85769379	85769379	A	G	SNP	MAT2A	ENST00000306434	human	ensembl	69_37n	+1	known	silent	c.651	p.E217	0.975	pfam_S-AdoMet_synt_central,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	pfam_S-AdoMet_synt_C,pfam_S-AdoMet_synt_central,pfam_S-AdoMet_synt_N,superfamily_S-AdoMet_synthetase_sfam,pirsf_S-AdoMet_synthetase,tigrfam_S-AdoMet_synthetase	-	no_errors	MAT2A	HGNC	ENSG00000168906	26	0	0.00	22	19	46.34	-	-	-
MST1	0	genome.wustl.edu	37	3	49722303	49722303	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	3	49722303	49722303	G	A	SNP	MST1	ENST00000449682	human	ensembl	69_37n	-1	known	missense	c.1637	p.T546M	0.000	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	17	0	0.00	19	5	20.83	-	-	-
MYLK	0	genome.wustl.edu	37	3	123512533	123512533	+	Silent	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	3	123512533	123512533	G	A	SNP	MYLK	ENST00000360304	human	ensembl	69_37n	-1	known	silent	c.156	p.F52	0.999	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Prot_kinase_cat_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	MYLK	HGNC	ENSG00000065534	13	0	0.00	19	9	32.14	-	-	-
MYT1L	0	genome.wustl.edu	37	2	2001120	2001120	+	Splice_Site	SNP	C	C	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	2	2001120	2001120	C	T	SNP	MYT1L	ENST00000399161	human	ensembl	69_37n	-1	known	splice_site	c.1-1	e1-1	1.000	-	-	-	no_errors	MYT1L	HGNC	ENSG00000186487	20	0	0.00	19	14	42.42	-	-	-
NAPA	0	genome.wustl.edu	37	19	47994082	47994082	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	19	47994082	47994082	G	A	SNP	NAPA	ENST00000263354	human	ensembl	69_37n	-1	known	missense	c.698	p.P233L	1.000	prints_NSF_attach	prints_NSF_attach	-	no_errors	NAPA	HGNC	ENSG00000105402	19	0	0.00	9	19	67.86	-	-	-
NEMF	0	genome.wustl.edu	37	14	50267209	50267209	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	14	50267209	50267209	C	A	SNP	NEMF	ENST00000298310	human	ensembl	69_37n	-1	known	missense	c.2301	p.M767I	0.358	NULL	pfam_Fibro-bd_N,pfam_DUF3441,pfam_DUF814,superfamily_FlgN-like_dom	-	no_errors	NEMF	HGNC	ENSG00000165525	162	0	0.00	114	94	45.19	-	-	-
NHLRC3	0	genome.wustl.edu	37	13	39616426	39616426	+	Silent	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	13	39616426	39616426	G	A	SNP	NHLRC3	ENST00000379600	human	ensembl	69_37n	+1	known	silent	c.570	p.L190	0.994	NULL	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	-	no_errors	NHLRC3	HGNC	ENSG00000188811	190	1	0.52	24	85	77.98	-	-	-
NRXN3	0	genome.wustl.edu	37	14	80328256	80328256	+	Silent	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	14	80328256	80328256	G	A	SNP	NRXN3	ENST00000335750	human	ensembl	69_37n	+1	known	silent	c.3135	p.S1045	0.092	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_EGF-like,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	28	0	0.00	12	13	52.00	-	-	-
PADI4	0	genome.wustl.edu	37	1	17668504	17668504	+	Missense_Mutation	SNP	T	T	C			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	17668504	17668504	T	C	SNP	PADI4	ENST00000375448	human	ensembl	69_37n	+1	known	missense	c.719	p.V240A	0.001	pfam_Prot_Arg_deaminase_cen_dom,superfamily_Prot_Arg_deaminase_cen_dom,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI4	HGNC	ENSG00000159339	15	0	0.00	5	7	58.33	-	-	-
PHF20L1	0	genome.wustl.edu	37	8	133829783	133829784	+	Frame_Shift_Ins	INS	-	-	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	8	133829783	133829784	-	G	INS	PHF20L1	ENST00000315808	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1572_1573	p.A524fs	0.846:0.842	NULL	pfam_DUF3776,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292	26	0	0.00	28	9	24.32	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	49	0	0.00	35	22	38.60	-	-	-
RGS12	0	genome.wustl.edu	37	4	3318059	3318059	+	Missense_Mutation	SNP	T	T	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	4	3318059	3318059	T	G	SNP	RGS12	ENST00000344733	human	ensembl	69_37n	+1	known	missense	c.162	p.D54E	0.002	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Raf-like_ras-bd,pfam_Regulat_G_prot_signal,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTyr_interaction_dom,smart_Regulat_G_prot_signal,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTyr_interaction_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal,prints_Regulat_G_prot_signal	-	no_errors	RGS12	HGNC	ENSG00000159788	11	0	0.00	9	18	66.67	-	-	-
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	69_37n	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251	34	0	0.00	37	19	33.33	-	-	-
RPS20	0	genome.wustl.edu	37	8	56985781	56985781	+	Silent	SNP	C	C	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	8	56985781	56985781	C	G	SNP	RPS20	ENST00000009589	human	ensembl	69_37n	-1	known	silent	c.228	p.T76	0.579	pfam_Ribosomal_S10,superfamily_Ribosomal_S10,prints_Ribosomal_S10,tigrfam_Ribosomal_S10_euk/arc	pfam_Ribosomal_S10,superfamily_Ribosomal_S10,prints_Ribosomal_S10,tigrfam_Ribosomal_S10_euk/arc	-	no_errors	RPS20	HGNC	ENSG00000008988	96	0	0.00	47	61	55.96	-	-	-
SATB1	0	genome.wustl.edu	37	3	18390811	18390811	+	Missense_Mutation	SNP	C	C	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	3	18390811	18390811	C	T	SNP	SATB1	ENST00000338745	human	ensembl	69_37n	-1	known	missense	c.2143	p.D715N	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Hmoeo_CUT	-	no_errors	SATB1	HGNC	ENSG00000182568	77	0	0.00	79	13	14.13	-	-	-
SLC13A5	0	genome.wustl.edu	37	17	6590917	6590918	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	17	6590917	6590918	-	A	INS	SLC13A5	ENST00000433363	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1506_1505	p.M503fs	1.000:1.000	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A5	HGNC	ENSG00000141485	24	0	0.00	21	21	50.00	-	-	-
SMOC2	0	genome.wustl.edu	37	6	169053691	169053691	+	Missense_Mutation	SNP	C	C	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	6	169053691	169053691	C	A	SNP	SMOC2	ENST00000354536	human	ensembl	69_37n	+1	known	missense	c.1101	p.F367L	1.000	pfam_SPARC/Testican_Ca-bd-dom,pfscan_EF_HAND_2	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal-type_dom,pfam_Prot_inh_Kazal,superfamily_Thyroglobulin_1,smart_Prot_inh_Kazal,smart_Thyroglobulin_1,pfscan_EF_HAND_2,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562	47	0	0.00	43	8	15.69	-	-	-
SPP2	0	genome.wustl.edu	37	2	234959682	234959682	+	Silent	SNP	G	G	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	2	234959682	234959682	G	T	SNP	SPP2	ENST00000168148	human	ensembl	69_37n	+1	known	silent	c.153	p.V51	0.995	pfam_Prot_inh_cystat	pfam_Spp-24,pfam_Prot_inh_cystat	-	no_errors	SPP2	HGNC	ENSG00000072080	44	0	0.00	33	30	47.62	-	-	-
SYVN1	0	genome.wustl.edu	37	11	64897543	64897543	+	Missense_Mutation	SNP	C	C	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	11	64897543	64897543	C	G	SNP	SYVN1	ENST00000377190	human	ensembl	69_37n	-1	known	missense	c.1339	p.E447Q	0.043	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SYVN1	HGNC	ENSG00000162298	10	0	0.00	8	9	50.00	-	-	-
TAS2R16	0	genome.wustl.edu	37	7	122635425	122635425	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	7	122635425	122635425	A	-	DEL	TAS2R16	ENST00000249284	human	ensembl	69_37n	-1	known	frame_shift_del	c.264	p.F88fs	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R16	HGNC	ENSG00000128519	76	0	0.00	55	30	35.29	-	-	-
TTN	0	genome.wustl.edu	37	2	179427225	179427225	+	Silent	SNP	A	A	G			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	2	179427225	179427225	A	G	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	silent	c.75930	p.N25310	0.981	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	66	0	0.00	47	43	47.78	-	-	-
VWA5B2	0	genome.wustl.edu	37	3	183956482	183956482	+	Missense_Mutation	SNP	G	G	A			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	3	183956482	183956482	G	A	SNP	VWA5B2	ENST00000426955	human	ensembl	69_37n	+1	known	missense	c.2023	p.E675K	0.998	NULL	NULL	-	no_errors	VWA5B2	HGNC	ENSG00000145198	11	0	0.00	11	9	45.00	-	-	-
XPO7	0	genome.wustl.edu	37	8	21844661	21844661	+	Missense_Mutation	SNP	G	G	T			TCGA-B6-A0X5-01A-21D-A10G-09	TCGA-B6-A0X5-10A-01D-A10G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	da42f10b-d515-4678-a038-ed9c92a8b56b	3ff1b637-7389-4e74-9e63-01642df895f4	8	21844661	21844661	G	T	SNP	XPO7	ENST00000434536	human	ensembl	69_37n	+1	known	missense	c.1614	p.Q538H	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO7	HGNC	ENSG00000130227	37	0	0.00	4	18	81.82	-	-	-
