Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
APLP2	0	genome.wustl.edu	37	11	130007179	130007180	+	Frame_Shift_Ins	INS	-	-	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	11	130007179	130007180	-	A	INS	APLP2	ENST00000263574	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1866_1867	p.G624fs	1.000:1.000	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234	227	0	0.00	264	148	35.92	-	-	-
ATP10B	0	genome.wustl.edu	37	5	160059168	160059168	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	5	160059168	160059168	A	G	SNP	ATP10B	ENST00000327245	human	ensembl	69_37n	-1	known	missense	c.1588	p.S530P	0.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP10B	HGNC	ENSG00000118322	24	0	0.00	33	26	44.07	-	-	-
C5orf25	0	genome.wustl.edu	37	5	175717093	175717093	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	5	175717093	175717093	G	A	SNP	C5orf25	ENST00000443967	human	ensembl	69_37n	+1	known	missense	c.509	p.S170N	0.986	NULL	NULL	-	no_errors	C5orf25	HGNC	ENSG00000170085	58	0	0.00	113	33	22.60	-	-	-
CACHD1	0	genome.wustl.edu	37	1	65124496	65124496	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	65124496	65124496	C	T	SNP	CACHD1	ENST00000371073	human	ensembl	69_37n	+1	known	missense	c.1891	p.R631W	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfscan_VWF_A	-	no_errors	CACHD1	HGNC	ENSG00000158966	94	0	0.00	60	33	35.48	-	-	-
CAP2	0	genome.wustl.edu	37	6	17421790	17421790	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	6	17421790	17421790	G	T	SNP	CAP2	ENST00000229922	human	ensembl	69_37n	+1	known	missense	c.4	p.A2S	0.999	NULL	pfam_Adenylate_cyclase-assoc_CAP_N,pfam_Adenylate_cyclase-assoc_CAP_C,superfamily_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	CAP2	HGNC	ENSG00000112186	64	0	0.00	125	18	12.59	-	-	-
CCNB3	0	genome.wustl.edu	37	X	50090648	50090648	+	Silent	SNP	A	A	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	X	50090648	50090648	A	G	SNP	CCNB3	ENST00000276014	human	ensembl	69_37n	+1	known	silent	c.3834	p.T1278	0.815	pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	87	0	0.00	47	25	34.72	-	-	-
CLIP4	0	genome.wustl.edu	37	2	29386783	29386783	+	Nonsense_Mutation	SNP	A	A	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	2	29386783	29386783	A	T	SNP	CLIP4	ENST00000402240	human	ensembl	69_37n	+1	known	nonsense	c.1627	p.R543*	1.000	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	-	no_errors	CLIP4	HGNC	ENSG00000115295	225	0	0.00	133	30	18.40	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16946407	16946407	+	RNA	SNP	T	T	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	16946407	16946407	T	G	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	15	0	0.00	53	13	19.70	-	-	-
CSMD2	0	genome.wustl.edu	37	1	34254255	34254255	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	34254255	34254255	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	69_37n	-1	known	missense	c.1609	p.L537F	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	69	0	0.00	69	18	20.69	-	-	-
CSTF2	0	genome.wustl.edu	37	X	100078982	100078982	+	Silent	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	X	100078982	100078982	G	A	SNP	CSTF2	ENST00000415585	human	ensembl	69_37n	+1	known	silent	c.552	p.P184	0.951	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CSTF2	HGNC	ENSG00000101811	260	0	0.00	259	63	19.57	-	-	-
CYP1B1-AS1	0	genome.wustl.edu	37	2	38408256	38408256	+	RNA	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	2	38408256	38408256	G	A	SNP	CYP1B1-AS1	ENST00000413828	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYP1B1-AS1	HGNC	ENSG00000232973	44	0	0.00	45	19	29.69	-	-	-
DNAH10	0	genome.wustl.edu	37	12	124349182	124349182	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	12	124349182	124349182	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	69_37n	+1	known	missense	c.6595	p.E2199K	1.000	pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_PyrdxlP-dep_Trfase_major_dom,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	274	0	0.00	154	112	42.11	-	-	-
DPYSL5	0	genome.wustl.edu	37	2	27154529	27154529	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	2	27154529	27154529	C	T	SNP	DPYSL5	ENST00000288699	human	ensembl	69_37n	+1	known	missense	c.691	p.R231C	1.000	pfam_Amidohydro_1,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851	131	0	0.00	236	88	27.16	-	-	-
ESRRG	0	genome.wustl.edu	37	1	216850754	216850754	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	216850754	216850754	G	T	SNP	ESRRG	ENST00000408911	human	ensembl	69_37n	-1	known	missense	c.136	p.P46T	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	ESRRG	HGNC	ENSG00000196482	76	0	0.00	129	25	16.23	-	-	-
FBXO6	0	genome.wustl.edu	37	1	11732060	11732060	+	Silent	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	11732060	11732060	G	A	SNP	FBXO6	ENST00000376753	human	ensembl	69_37n	+1	known	silent	c.489	p.P163	0.001	pfam_F-box-assoc_dom,superfamily_Galactose-bd-like,pfscan_F-box-assoc_dom	pfam_F-box-assoc_dom,pfam_F-box_dom_cyclin-like,superfamily_Galactose-bd-like,superfamily_F-box_dom_cyclin-like,smart_F-box_dom_cyclin-like,pfscan_F-box_dom_cyclin-like,pfscan_F-box-assoc_dom	-	no_errors	FBXO6	HGNC	ENSG00000116663	94	0	0.00	98	19	16.10	-	-	-
GSPT1	0	genome.wustl.edu	37	16	11976892	11976892	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	16	11976892	11976892	G	A	SNP	GSPT1	ENST00000434724	human	ensembl	69_37n	-1	known	missense	c.1408	p.L470F	1.000	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_elong_init/rib_B-barrel	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd	-	no_errors	GSPT1	HGNC	ENSG00000103342	217	0	0.00	204	43	17.41	-	-	-
HDAC1	0	genome.wustl.edu	37	1	32798618	32798618	+	Silent	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	32798618	32798618	G	A	SNP	HDAC1	ENST00000373548	human	ensembl	69_37n	+1	known	silent	c.1422	p.G474	1.000	NULL	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC1	HGNC	ENSG00000116478	122	0	0.00	92	62	40.26	-	-	-
HEPACAM2	0	genome.wustl.edu	37	7	92826860	92826860	+	Nonsense_Mutation	SNP	G	G	C			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	7	92826860	92826860	G	C	SNP	HEPACAM2	ENST00000394468	human	ensembl	69_37n	-1	known	nonsense	c.1076	p.S359*	1.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	HEPACAM2	HGNC	ENSG00000188175	285	0	0.00	146	88	37.45	-	-	-
IKZF2	0	genome.wustl.edu	37	2	213872500	213872500	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	2	213872500	213872500	G	T	SNP	IKZF2	ENST00000434687	human	ensembl	69_37n	-1	known	missense	c.1165	p.P389T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF2	HGNC	ENSG00000030419	125	0	0.00	99	39	28.26	-	-	-
IL6ST	0	genome.wustl.edu	37	5	55251984	55251984	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	5	55251984	55251984	T	C	SNP	IL6ST	ENST00000336909	human	ensembl	69_37n	-1	known	missense	c.1136	p.N379S	0.022	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL6_recept-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352	329	0	0.00	41	135	76.70	-	-	-
ISL1	0	genome.wustl.edu	37	5	50687262	50687262	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	5	50687262	50687262	C	T	SNP	ISL1	ENST00000230658	human	ensembl	69_37n	+1	known	missense	c.920	p.A307V	1.000	NULL	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	ISL1	HGNC	ENSG00000016082	33	0	0.00	37	8	17.78	-	-	-
KRT81	0	genome.wustl.edu	37	12	52681497	52681497	+	Silent	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	12	52681497	52681497	C	T	SNP	KRT81	ENST00000327741	human	ensembl	69_37n	-1	known	silent	c.909	p.E303	1.000	pfam_F,superfamily_Prefoldin	pfam_F,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT81	HGNC	ENSG00000205426	35	0	0.00	73	52	41.60	-	-	-
LPPR2	0	genome.wustl.edu	37	19	11474496	11474496	+	Splice_Site	SNP	G	G	C			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	19	11474496	11474496	G	C	SNP	LPPR2	ENST00000251473	human	ensembl	69_37n	+1	known	splice_site	c.947+1	e6+1	1.000	-	-	-	no_errors	LPPR2	Clone_based_vega_gene	ENSG00000105520	21	0	0.00	25	14	35.90	-	-	-
MADD	0	genome.wustl.edu	37	11	47306022	47306022	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	11	47306022	47306022	A	T	SNP	MADD	ENST00000311027	human	ensembl	69_37n	+1	known	missense	c.2063	p.D688V	0.019	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	63	0	0.00	107	22	17.05	-	-	-
MAGEB4	0	genome.wustl.edu	37	X	30260918	30260918	+	Silent	SNP	A	A	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	X	30260918	30260918	A	G	SNP	MAGEB4	ENST00000378982	human	ensembl	69_37n	+1	known	silent	c.666	p.E222	0.004	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	93	0	0.00	188	36	16.07	-	-	-
MARK1	0	genome.wustl.edu	37	1	220835233	220835233	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	220835233	220835233	A	G	SNP	MARK1	ENST00000366917	human	ensembl	69_37n	+1	known	missense	c.2113	p.S705G	1.000	superfamily_Kinase-assoc_KA1	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase-assoc_KA1,superfamily_Kinase-like_dom,superfamily_Kinase-assoc_KA1,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	80	0	0.00	62	12	16.00	-	-	-
MEPE	0	genome.wustl.edu	37	4	88766794	88766794	+	Silent	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	4	88766794	88766794	C	T	SNP	MEPE	ENST00000361056	human	ensembl	69_37n	+1	known	silent	c.774	p.D258	0.985	NULL	pfam_Osteoregulin	-	no_errors	MEPE	HGNC	ENSG00000152595	57	0	0.00	114	21	15.56	-	-	-
OASL	0	genome.wustl.edu	37	12	121461839	121461839	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	12	121461839	121461839	C	T	SNP	OASL	ENST00000257570	human	ensembl	69_37n	-1	known	missense	c.1001	p.C334Y	1.000	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Ubiquitin,pfam_SUMO,smart_Ubiquitin,pfscan_2-5-oligoadenylate_synth_N,pfscan_Ubiquitin_supergroup	-	no_errors	OASL	HGNC	ENSG00000135114	68	0	0.00	88	17	16.19	-	-	-
PREX2	0	genome.wustl.edu	37	8	69031699	69031699	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	8	69031699	69031699	C	G	SNP	PREX2	ENST00000288368	human	ensembl	69_37n	+1	known	missense	c.3454	p.H1152D	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	197	0	0.00	223	44	16.48	-	-	-
PRKCG	0	genome.wustl.edu	37	19	54403952	54403952	+	Silent	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	19	54403952	54403952	C	T	SNP	PRKCG	ENST00000540413	human	ensembl	69_37n	+1	known	silent	c.1524	p.P508	0.650	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_Ca-dep,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCG	HGNC	ENSG00000126583	55	0	0.00	73	42	36.52	-	-	-
PSMC6	0	genome.wustl.edu	37	14	53184856	53184856	+	Nonsense_Mutation	SNP	T	T	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	14	53184856	53184856	T	G	SNP	PSMC6	ENST00000445930	human	ensembl	69_37n	+1	known	nonsense	c.629	p.L210*	1.000	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC6	HGNC	ENSG00000100519	226	1	0.44	136	35	20.47	-	-	-
PTBP3	0	genome.wustl.edu	37	9	115038244	115038244	+	Silent	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	9	115038244	115038244	C	T	SNP	PTBP3	ENST00000458258	human	ensembl	69_37n	-1	known	silent	c.186	p.S62	0.051	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	PTBP3	HGNC	ENSG00000119314	179	0	0.00	108	22	16.79	-	-	-
ROBO4	0	genome.wustl.edu	37	11	124757090	124757090	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	11	124757090	124757090	C	G	SNP	ROBO4	ENST00000306534	human	ensembl	69_37n	-1	known	missense	c.2218	p.A740P	0.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	ROBO4	HGNC	ENSG00000154133	23	0	0.00	33	29	46.77	-	-	-
RPH3A	0	genome.wustl.edu	37	12	113306329	113306329	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	12	113306329	113306329	C	A	SNP	RPH3A	ENST00000389385	human	ensembl	69_37n	+1	known	missense	c.539	p.P180H	0.001	NULL	pfam_C2_Ca-dep,pfam_Rabphilin3A_effector_Zn-bd,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_Znf_FYVE_PHD,smart_C2_Ca-dep,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_membr_targeting,pfscan_Rab-bd_domain,pfscan_Znf_FYVE-rel	-	no_errors	RPH3A	HGNC	ENSG00000089169	32	0	0.00	34	21	38.18	-	-	-
STH	0	genome.wustl.edu	37	17	44076959	44076959	+	Missense_Mutation	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	17	44076959	44076959	G	T	SNP	STH	ENST00000537309	human	ensembl	69_37n	+1	known	missense	c.314	p.C105F	0.000	NULL	NULL	-	no_errors	STH	HGNC	ENSG00000256762	36	0	0.00	41	8	16.33	-	-	-
TBC1D21	0	genome.wustl.edu	37	15	74177364	74177364	+	Nonsense_Mutation	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	15	74177364	74177364	G	T	SNP	TBC1D21	ENST00000300504	human	ensembl	69_37n	+1	known	nonsense	c.499	p.E167*	0.988	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	74	0	0.00	30	11	26.83	-	-	-
TMEM53	0	genome.wustl.edu	37	1	45120323	45120323	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	1	45120323	45120323	C	T	SNP	TMEM53	ENST00000372237	human	ensembl	69_37n	-1	known	missense	c.742	p.V248M	0.002	pfam_DUF829_TMEM53	pfam_DUF829_TMEM53	-	no_errors	TMEM53	HGNC	ENSG00000126106	55	0	0.00	24	9	27.27	-	-	-
USP25	0	genome.wustl.edu	37	21	17199314	17199314	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	21	17199314	17199314	A	T	SNP	USP25	ENST00000453553	human	ensembl	69_37n	+1	putative	missense	c.71	p.E24V	0.719	pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	USP25	HGNC	ENSG00000155313	91	0	0.00	90	19	17.43	-	-	-
VLDLR	0	genome.wustl.edu	37	9	2643294	2643294	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	9	2643294	2643294	G	A	SNP	VLDLR	ENST00000382100	human	ensembl	69_37n	+1	known	missense	c.583	p.A195T	0.019	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd,superfamily_LDrepeatLR_classA_rpt,superfamily_Growth_fac_rcpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	VLDLR	HGNC	ENSG00000147852	23	0	0.00	6	14	66.67	-	-	-
VPS41	0	genome.wustl.edu	37	7	38768370	38768370	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	7	38768370	38768370	T	C	SNP	VPS41	ENST00000310301	human	ensembl	69_37n	-1	known	missense	c.2281	p.K761E	1.000	pirsf_VPS41	pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_VPS41,pfscan_Znf_RING	-	no_errors	VPS41	HGNC	ENSG00000006715	218	0	0.00	182	26	12.50	-	-	-
WDR72	0	genome.wustl.edu	37	15	53908085	53908085	+	Missense_Mutation	SNP	T	T	G			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	15	53908085	53908085	T	G	SNP	WDR72	ENST00000360509	human	ensembl	69_37n	-1	known	missense	c.2318	p.K773T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	165	0	0.00	143	36	20.11	-	-	-
WDR72	0	genome.wustl.edu	37	15	54015098	54015098	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	15	54015098	54015098	G	A	SNP	WDR72	ENST00000360509	human	ensembl	69_37n	-1	known	missense	c.161	p.A54V	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	134	0	0.00	114	24	17.39	-	-	-
XRN1	0	genome.wustl.edu	37	3	142123820	142123820	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	3	142123820	142123820	A	T	SNP	XRN1	ENST00000264951	human	ensembl	69_37n	-1	known	missense	c.1812	p.D604E	0.002	pirsf_5_3_exoribonuclease_1	pfam_Put_53exo,pirsf_5_3_exoribonuclease_1	-	no_errors	XRN1	HGNC	ENSG00000114127	177	0	0.00	167	110	39.71	-	-	-
ZNF202	0	genome.wustl.edu	37	11	123596728	123596728	+	Missense_Mutation	SNP	T	T	A			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	11	123596728	123596728	T	A	SNP	ZNF202	ENST00000336139	human	ensembl	69_37n	-1	known	missense	c.1924	p.T642S	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC	ENSG00000166261	137	0	0.00	196	39	16.53	-	-	-
ZNF786	0	genome.wustl.edu	37	7	148769113	148769113	+	Silent	SNP	G	G	T			TCGA-C8-A12X-01A-11D-A10Y-09	TCGA-C8-A12X-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	f133a2e3-73a2-40b8-855f-e819e4d11630	8a015260-3f5f-4130-adb3-d15881d67e08	7	148769113	148769113	G	T	SNP	ZNF786	ENST00000491431	human	ensembl	69_37n	-1	known	silent	c.751	p.R251	0.004	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF786	HGNC	ENSG00000197362	34	0	0.00	12	8	40.00	-	-	-
