Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ALDH1A1	0	genome.wustl.edu	37	9	75540487	75540487	+	Silent	SNP	A	A	C			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	9	75540487	75540487	A	C	SNP	ALDH1A1	ENST00000297785	human	ensembl	69_37n	-1	known	silent	c.546	p.P182	0.990	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092	230	0	0.00	252	38	13.10	-	-	-
ALDOB	0	genome.wustl.edu	37	9	104193120	104193120	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	9	104193120	104193120	G	A	SNP	ALDOB	ENST00000374855	human	ensembl	69_37n	-1	known	missense	c.50	p.S17L	0.986	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872	317	0	0.00	312	53	14.52	-	-	-
ATP9A	0	genome.wustl.edu	37	20	50329531	50329532	+	Frame_Shift_Ins	INS	-	-	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	20	50329531	50329532	-	G	INS	ATP9A	ENST00000338821	human	ensembl	69_37n	-1	known	frame_shift_ins	c.410_409	p.Q137fs	1.000:1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP9A	HGNC	ENSG00000054793	91	0	0.00	72	14	16.28	-	-	-
C7orf41	0	genome.wustl.edu	37	7	30197080	30197080	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	7	30197080	30197080	C	T	SNP	C7orf41	ENST00000324453	human	ensembl	69_37n	+1	known	silent	c.312	p.D104	0.972	NULL	NULL	-	no_errors	C7orf41	HGNC	ENSG00000180354	232	0	0.00	147	90	37.97	-	-	-
CCDC115	0	genome.wustl.edu	37	2	131099725	131099727	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	2	131099725	131099727	CTT	-	DEL	CCDC115	ENST00000437688	human	ensembl	69_37n	-1	known	in_frame_del	c.78_76	p.K26in_frame_del	0.000:0.000:0.000	NULL	NULL	-	no_errors	CCDC115	HGNC	ENSG00000136710	55	0	0.00	34	9	20.93	-	-	-
CD1E	0	genome.wustl.edu	37	1	158326560	158326560	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	1	158326560	158326560	C	T	SNP	CD1E	ENST00000368167	human	ensembl	69_37n	+1	known	silent	c.1041	p.V347	0.000	NULL	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	CD1E	HGNC	ENSG00000158488	396	0	0.00	467	74	13.68	-	-	-
COL6A2	0	genome.wustl.edu	37	21	47539719	47539719	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	21	47539719	47539719	C	T	SNP	COL6A2	ENST00000300527	human	ensembl	69_37n	+1	known	silent	c.1287	p.P429	0.258	pfam_Collagen	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173	40	0	0.00	17	11	39.29	-	-	-
CORO7	0	genome.wustl.edu	37	16	4412030	4412030	+	Nonsense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	16	4412030	4412030	C	T	SNP	CORO7	ENST00000576437	human	ensembl	69_37n	-1	known	nonsense	c.219	p.W73*	1.000	NULL	NULL	-	no_errors	CORO7	Clone_based_vega_gene	ENSG00000262246	69	0	0.00	43	28	39.44	-	-	-
CTC1	0	genome.wustl.edu	37	17	8151340	8151340	+	Silent	SNP	C	C	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	17	8151340	8151340	C	A	SNP	CTC1	ENST00000315684	human	ensembl	69_37n	-1	known	silent	c.15	p.R5	0.000	NULL	NULL	-	no_errors	CTC1	HGNC	ENSG00000178971	64	0	0.00	35	16	31.37	-	-	-
DENND1A	0	genome.wustl.edu	37	9	126429352	126429354	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	9	126429352	126429354	AAG	-	DEL	DENND1A	ENST00000394219	human	ensembl	69_37n	-1	known	in_frame_del	c.364_362	p.S121in_frame_del	1.000:1.000:1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1A	HGNC	ENSG00000119522	188	0	0.00	244	38	13.43	-	-	-
DNM1	0	genome.wustl.edu	37	9	130996358	130996358	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	9	130996358	130996358	G	A	SNP	DNM1	ENST00000372923	human	ensembl	69_37n	+1	known	missense	c.1394	p.R465Q	1.000	pfam_Dynamin_central	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin	-	no_errors	DNM1	HGNC	ENSG00000106976	25	0	0.00	9	13	59.09	-	-	-
DOPEY1	0	genome.wustl.edu	37	6	83863703	83863703	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	6	83863703	83863703	A	T	SNP	DOPEY1	ENST00000349129	human	ensembl	69_37n	+1	known	missense	c.6330	p.E2110D	1.000	superfamily_ARM-type_fold	pfam_Dopey_N,superfamily_ARM-type_fold	-	no_errors	DOPEY1	HGNC	ENSG00000083097	699	0	0.00	264	249	48.54	-	-	-
DPY19L2	0	genome.wustl.edu	37	12	64055199	64055199	+	Nonsense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	12	64055199	64055199	C	T	SNP	DPY19L2	ENST00000324472	human	ensembl	69_37n	-1	known	nonsense	c.513	p.W171*	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990	268	0	0.00	551	106	16.13	-	-	-
EIF3G	0	genome.wustl.edu	37	19	10226169	10226169	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	19	10226169	10226169	G	A	SNP	EIF3G	ENST00000253108	human	ensembl	69_37n	-1	known	silent	c.933	p.N311	0.983	smart_RRM_dom,pirsf_Transl_init_eIF-3_G,pfscan_RRM_dom	pfam_eIF3g_N,pfam_RRM_dom,smart_RRM_dom,pirsf_Transl_init_eIF-3_G,pfscan_RRM_dom	-	no_errors	EIF3G	HGNC	ENSG00000130811	141	1	0.70	79	18	18.56	-	-	-
EPHA5	0	genome.wustl.edu	37	4	66197758	66197758	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	4	66197758	66197758	G	A	SNP	EPHA5	ENST00000273854	human	ensembl	69_37n	-1	known	missense	c.2941	p.R981W	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	196	1	0.51	168	61	26.64	-	-	-
ETS1	0	genome.wustl.edu	37	11	128354830	128354830	+	Silent	SNP	G	G	C			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	11	128354830	128354830	G	C	SNP	ETS1	ENST00000392668	human	ensembl	69_37n	-1	known	silent	c.750	p.P250	0.796	pirsf_Transforming_factor_C-ets	pfam_Ets,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets,pirsf_Transforming_factor_C-ets,pfscan_Ets,prints_Ets	-	no_errors	ETS1	HGNC	ENSG00000134954	265	0	0.00	202	64	23.97	-	-	-
FBXO25	0	genome.wustl.edu	37	8	413124	413124	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	8	413124	413124	C	T	SNP	FBXO25	ENST00000276326	human	ensembl	69_37n	+1	known	missense	c.961	p.R321W	0.993	superfamily_F-box_dom_cyclin-like	superfamily_F-box_dom_cyclin-like	-	no_errors	FBXO25	HGNC	ENSG00000147364	415	0	0.00	152	65	29.95	-	-	-
FHOD3	0	genome.wustl.edu	37	18	34238119	34238119	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	18	34238119	34238119	C	T	SNP	FHOD3	ENST00000257209	human	ensembl	69_37n	+1	known	silent	c.1278	p.S426	0.000	NULL	pfam_FH2_actin-bd,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	FHOD3	HGNC	ENSG00000134775	482	0	0.00	658	98	12.88	-	-	-
GPC3	0	genome.wustl.edu	37	X	132887698	132887698	+	Nonsense_Mutation	SNP	G	G	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	X	132887698	132887698	G	T	SNP	GPC3	ENST00000406757	human	ensembl	69_37n	-1	known	nonsense	c.32	p.S11*	1.000	pfam_Glypican	pfam_Glypican	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	GPC3	HGNC	ENSG00000147257	950	0	0.00	753	304	28.73	-	-	-
HEATR7B2	0	genome.wustl.edu	37	5	41033173	41033173	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	5	41033173	41033173	G	A	SNP	HEATR7B2	ENST00000399564	human	ensembl	69_37n	-1	known	silent	c.2331	p.S777	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR7B2	HGNC	ENSG00000171495	444	0	0.00	352	68	16.19	-	-	-
HGFAC	0	genome.wustl.edu	37	4	3445881	3445881	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	4	3445881	3445881	C	T	SNP	HGFAC	ENST00000382774	human	ensembl	69_37n	+1	known	silent	c.591	p.C197	0.007	pirsf_Coagulation_fac_XIIa/HGFA,smart_EGF-like,pfscan_EG-like_dom	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1_S6,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EGF-like_dom,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EGF-like,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	HGFAC	HGNC	ENSG00000109758	35	0	0.00	13	5	27.78	-	-	-
KIAA0922	0	genome.wustl.edu	37	4	154479493	154479493	+	Silent	SNP	C	C	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	4	154479493	154479493	C	G	SNP	KIAA0922	ENST00000409959	human	ensembl	69_37n	+1	known	silent	c.633	p.V211	0.983	NULL	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210	251	0	0.00	208	38	15.45	-	-	-
KIF2B	0	genome.wustl.edu	37	17	51900989	51900989	+	Missense_Mutation	SNP	G	G	C			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	17	51900989	51900989	G	C	SNP	KIF2B	ENST00000268919	human	ensembl	69_37n	+1	known	missense	c.595	p.D199H	0.705	NULL	pfam_Kinesin_motor_dom,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	73	0	0.00	72	8	10.00	-	-	-
KRT33A	0	genome.wustl.edu	37	17	39503181	39503181	+	Missense_Mutation	SNP	T	T	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	17	39503181	39503181	T	G	SNP	KRT33A	ENST00000007735	human	ensembl	69_37n	-1	known	missense	c.791	p.Q264P	1.000	pfam_F,superfamily_Prefoldin	pfam_F,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT33A	HGNC	ENSG00000006059	280	1	0.36	187	103	35.52	-	-	-
MAGI1	0	genome.wustl.edu	37	3	65361584	65361584	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	3	65361584	65361584	C	T	SNP	MAGI1	ENST00000402939	human	ensembl	69_37n	-1	known	missense	c.3032	p.R1011Q	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_Rsp5_WWP,pfam_Guanylate_kin,superfamily_PDZ,superfamily_WW_Rsp5_WWP,smart_PDZ,smart_Guanylate_kin/L-typ_Ca_channel,smart_WW_Rsp5_WWP,pfscan_PDZ,pfscan_WW_Rsp5_WWP,pfscan_Guanylate_kin	-	no_errors	MAGI1	HGNC	ENSG00000151276	325	0	0.00	196	57	22.53	-	-	-
MUC16	0	genome.wustl.edu	37	19	9000463	9000463	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	19	9000463	9000463	C	T	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	silent	c.40521	p.T13507	0.000	pfam_SEA,smart_SEA,pfscan_SEA	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	615	2	0.32	439	125	22.16	-	-	-
NBPF12	0	genome.wustl.edu	37	1	146400130	146400130	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	1	146400130	146400130	C	A	SNP	NBPF12	ENST00000446760	human	ensembl	69_37n	+1	known	missense	c.606	p.D202E	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF12	HGNC	ENSG00000186275	61	0	0.00	31	21	40.38	-	-	-
NELL2	0	genome.wustl.edu	37	12	45269656	45269656	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	12	45269656	45269656	G	A	SNP	NELL2	ENST00000437801	human	ensembl	69_37n	-1	known	silent	c.147	p.R49	0.483	NULL	pfam_EGF-like_Ca-bd,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL2	HGNC	ENSG00000184613	97	0	0.00	64	16	20.00	-	-	-
NOP14	0	genome.wustl.edu	37	4	2955267	2955267	+	Missense_Mutation	SNP	C	C	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	4	2955267	2955267	C	G	SNP	NOP14	ENST00000416614	human	ensembl	69_37n	-1	known	missense	c.718	p.E240Q	0.227	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269	540	0	0.00	431	88	16.96	-	-	-
P2RY13	0	genome.wustl.edu	37	3	151046371	151046371	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	3	151046371	151046371	A	G	SNP	P2RY13	ENST00000325602	human	ensembl	69_37n	-1	known	missense	c.473	p.V158A	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_UDPG_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_supfam,prints_P2Y13_purnocptor,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,prints_UDPG_rcpt	-	no_errors	P2RY13	HGNC	ENSG00000181631	30	0	0.00	68	11	13.92	-	-	-
PCDH19	0	genome.wustl.edu	37	X	99661925	99661925	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	X	99661925	99661925	G	A	SNP	PCDH19	ENST00000373034	human	ensembl	69_37n	-1	known	silent	c.1671	p.N557	0.999	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194	307	0	0.00	249	65	20.70	-	-	-
RAB11FIP1	0	genome.wustl.edu	37	8	37720512	37720512	+	Silent	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	8	37720512	37720512	C	T	SNP	RAB11FIP1	ENST00000330843	human	ensembl	69_37n	-1	known	silent	c.3753	p.L1251	1.000	pfam_Rab-bd_FIP-RBD	pfam_Rab-bd_FIP-RBD,pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675	437	0	0.00	537	190	26.06	-	-	-
SEMA3D	0	genome.wustl.edu	37	7	84649620	84649620	+	Nonsense_Mutation	SNP	T	T	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	7	84649620	84649620	T	A	SNP	SEMA3D	ENST00000284136	human	ensembl	69_37n	-1	known	nonsense	c.1432	p.K478*	1.000	pfam_Semaphorin/CD100_Ag,superfamily_Semaphorin/CD100_Ag,smart_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Ig_V-set,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA3D	HGNC	ENSG00000153993	248	0	0.00	231	32	12.12	-	-	-
SMCR7L	0	genome.wustl.edu	37	22	39907907	39907907	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	22	39907907	39907907	G	A	SNP	SMCR7L	ENST00000325301	human	ensembl	69_37n	+1	known	silent	c.198	p.S66	0.500	NULL	NULL	-	no_errors	SMCR7L	HGNC	ENSG00000100335	88	0	0.00	89	18	16.82	-	-	-
SPP1	0	genome.wustl.edu	37	4	88901223	88901223	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	4	88901223	88901223	T	C	SNP	SPP1	ENST00000395080	human	ensembl	69_37n	+1	known	missense	c.119	p.V40A	0.004	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	-	no_errors	SPP1	HGNC	ENSG00000118785	272	0	0.00	185	109	36.95	-	-	-
SSH1	0	genome.wustl.edu	37	12	109185905	109185905	+	Nonsense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	12	109185905	109185905	G	A	SNP	SSH1	ENST00000326470	human	ensembl	69_37n	-1	known	nonsense	c.2083	p.Q695*	0.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH1	HGNC	ENSG00000084112	55	0	0.00	50	35	41.18	-	-	-
TNC	0	genome.wustl.edu	37	9	117840365	117840365	+	Missense_Mutation	SNP	C	C	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	9	117840365	117840365	C	A	SNP	TNC	ENST00000350763	human	ensembl	69_37n	-1	known	missense	c.2531	p.G844V	0.718	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C,superfamily_Fibronectin_type3,smart_EGF-like,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	284	0	0.00	209	110	34.38	-	-	-
TOX	0	genome.wustl.edu	37	8	59852038	59852038	+	Silent	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	8	59852038	59852038	G	A	SNP	TOX	ENST00000361421	human	ensembl	69_37n	-1	known	silent	c.234	p.L78	0.995	NULL	pfam_HMG_superfamily,superfamily_HMG_superfamily,smart_HMG_superfamily,pfscan_HMG_superfamily	-	no_errors	TOX	HGNC	ENSG00000198846	272	0	0.00	657	90	12.05	-	-	-
TP53	0	genome.wustl.edu	37	17	7578509	7578509	+	Missense_Mutation	SNP	A	A	G			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	17	7578509	7578509	A	G	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.421	p.C141R	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	146	1	0.68	40	47	54.02	-	-	-
TRHDE	0	genome.wustl.edu	37	12	72667271	72667271	+	Missense_Mutation	SNP	A	A	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	12	72667271	72667271	A	T	SNP	TRHDE	ENST00000261180	human	ensembl	69_37n	+1	known	missense	c.713	p.N238I	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	29	0	0.00	28	11	28.21	-	-	-
TRMT2A	0	genome.wustl.edu	37	22	20103765	20103765	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	22	20103765	20103765	G	A	SNP	TRMT2A	ENST00000252136	human	ensembl	69_37n	-1	known	missense	c.395	p.A132V	0.947	pfscan_RRM_dom	pfam_U5_MeTrfase,pfam_PCMT,pfam_Small_mtfrase_dom,pfam_RNA_methylase_dom,pfam_RNA_MeTrfase_RsmD,pfam_Methyltransf_11,pfam_tRNA_(Gua-N-7)_MeTrfase,pfam_UbiE/COQ5_MeTrFase,pfscan_RRM_dom	-	no_errors	TRMT2A	HGNC	ENSG00000099899	41	0	0.00	48	11	18.64	-	-	-
TRPC5	0	genome.wustl.edu	37	X	111155832	111155832	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	X	111155832	111155832	C	T	SNP	TRPC5	ENST00000262839	human	ensembl	69_37n	-1	known	missense	c.587	p.R196Q	0.997	pfam_TRP_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315	200	2	0.99	152	62	28.84	-	-	-
TTC31	0	genome.wustl.edu	37	2	74719773	74719773	+	Missense_Mutation	SNP	C	C	T			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	2	74719773	74719773	C	T	SNP	TTC31	ENST00000233623	human	ensembl	69_37n	+1	novel	missense	c.1162	p.R388C	0.923	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC31	HGNC	ENSG00000115282	121	0	0.00	96	31	24.41	-	-	-
VPS13C	0	genome.wustl.edu	37	15	62146723	62146723	+	Missense_Mutation	SNP	G	G	A			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	15	62146723	62146723	G	A	SNP	VPS13C	ENST00000261517	human	ensembl	69_37n	-1	known	missense	c.11195	p.T3732M	0.008	NULL	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	216	0	0.00	179	37	17.13	-	-	-
ZP4	0	genome.wustl.edu	37	1	238048592	238048592	+	Missense_Mutation	SNP	T	T	C			TCGA-C8-A1HG-01A-11D-A135-09	TCGA-C8-A1HG-10A-01D-A135-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	ba937e3d-30b7-4446-84fb-5f77831a4843	bfecb97d-fcf8-4508-8c7a-b2568f6e3972	1	238048592	238048592	T	C	SNP	ZP4	ENST00000366570	human	ensembl	69_37n	-1	known	missense	c.1184	p.Y395C	0.991	pfam_Zona_pellucida_Endoglin/CD105,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105	pfam_Zona_pellucida_Endoglin/CD105,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_Zona_pellucida_Endoglin/CD105,pfscan_Zona_pellucida_Endoglin/CD105,prints_Endoglin/CD105_subgr	-	no_errors	ZP4	HGNC	ENSG00000116996	230	0	0.00	138	62	31.00	-	-	-
