Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
CAMSAP3	0	genome.wustl.edu	37	19	7682810	7682810	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	19	7682810	7682810	C	T	SNP	CAMSAP3	ENST00000446248	human	ensembl	69_37n	+1	known	missense	c.3698	p.S1233L	0.998	pfam_CKK_domain,superfamily_PRC_barrell-like	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrell-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826	68	0	0.00	65	8	10.96	-	-	-
COBL	0	genome.wustl.edu	37	7	51095504	51095504	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	7	51095504	51095504	G	T	SNP	COBL	ENST00000395542	human	ensembl	69_37n	-1	known	missense	c.3535	p.P1179T	0.845	NULL	pfam_Cordon-bleu_domain,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	COBL	HGNC	ENSG00000106078	321	2	0.62	303	48	13.64	-	-	-
EIF2AK3	0	genome.wustl.edu	37	2	88885398	88885398	+	Silent	SNP	C	C	A			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	2	88885398	88885398	C	A	SNP	EIF2AK3	ENST00000303236	human	ensembl	69_37n	-1	known	silent	c.1611	p.T537	0.884	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071	255	0	0.00	182	31	14.55	-	-	-
GP1BA	0	genome.wustl.edu	37	17	4837701	4837701	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	17	4837701	4837701	C	G	SNP	GP1BA	ENST00000329125	human	ensembl	69_37n	+1	known	missense	c.1802	p.S601W	0.001	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	GP1BA	HGNC	ENSG00000185245	77	0	0.00	121	27	18.24	-	-	-
GPKOW	0	genome.wustl.edu	37	X	48978773	48978773	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	X	48978773	48978773	G	T	SNP	GPKOW	ENST00000156109	human	ensembl	69_37n	-1	known	missense	c.431	p.A144E	0.467	NULL	pfam_KOW,pfam_G_patch_dom,superfamily_Translation_prot_SH3-like,smart_G_patch_dom,smart_KOW,pfscan_G_patch_dom	-	no_errors	GPKOW	HGNC	ENSG00000068394	88	0	0.00	107	35	24.48	-	-	-
HIST1H2AE	0	genome.wustl.edu	37	6	26217367	26217367	+	Silent	SNP	G	G	A			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	6	26217367	26217367	G	A	SNP	HIST1H2AE	ENST00000303910	human	ensembl	69_37n	+1	known	silent	c.165	p.V55	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AE	HGNC	ENSG00000168274	73	0	0.00	112	22	16.42	-	-	-
KCNK2	0	genome.wustl.edu	37	1	215408369	215408369	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	1	215408369	215408369	C	T	SNP	KCNK2	ENST00000444842	human	ensembl	69_37n	+1	known	missense	c.1162	p.H388Y	1.000	NULL	pfam_Ion_trans_2,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK2	HGNC	ENSG00000082482	157	0	0.00	208	26	11.11	-	-	-
NEK3	0	genome.wustl.edu	37	13	52726763	52726763	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	13	52726763	52726763	T	-	DEL	NEK3	ENST00000452082	human	ensembl	69_37n	-1	known	frame_shift_del	c.437	p.H146fs	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK3	HGNC	ENSG00000136098	213	0	0.00	216	75	25.42	-	-	-
RECQL4	0	genome.wustl.edu	37	8	145739483	145739483	+	RNA	SNP	C	C	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	8	145739483	145739483	C	T	SNP	RECQL4	ENST00000428558	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RECQL4	HGNC	ENSG00000160957	34	0	0.00	30	8	20.00	-	-	-
RUNX1	0	genome.wustl.edu	37	21	36252853	36252853	+	Splice_Site	SNP	C	C	G			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	21	36252853	36252853	C	G	SNP	RUNX1	ENST00000300305	human	ensembl	69_37n	-1	known	splice_site	c.508+1	e4+1	1.000	-	-	-	no_errors	RUNX1	HGNC	ENSG00000159216	175	0	0.00	187	28	12.96	-	-	-
SLC46A1	0	genome.wustl.edu	37	17	26732105	26732105	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	17	26732105	26732105	G	A	SNP	SLC46A1	ENST00000440501	human	ensembl	69_37n	-1	known	missense	c.610	p.R204W	0.340	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC46A1	HGNC	ENSG00000076351	37	0	0.00	28	9	24.32	-	-	-
THNSL1	0	genome.wustl.edu	37	10	25313006	25313006	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	10	25313006	25313006	G	T	SNP	THNSL1	ENST00000376356	human	ensembl	69_37n	+1	known	missense	c.854	p.G285V	0.674	superfamily_PyrdxlP-dep_enz_bsu	pfam_Shikimate_kinase,pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,prints_Shikimate_kinase,tigrfam_Thr_synthase	-	no_errors	THNSL1	HGNC	ENSG00000185875	228	0	0.00	193	33	14.60	-	-	-
TLR8	0	genome.wustl.edu	37	X	12937272	12937272	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	X	12937272	12937272	A	G	SNP	TLR8	ENST00000218032	human	ensembl	69_37n	+1	known	missense	c.113	p.E38G	0.009	NULL	pfam_Leu-rich_rpt,pfam_TIR_dom,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR8	HGNC	ENSG00000101916	89	0	0.00	85	10	10.53	-	-	-
TRERF1	0	genome.wustl.edu	37	6	42227276	42227276	+	Silent	SNP	C	C	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	6	42227276	42227276	C	T	SNP	TRERF1	ENST00000541110	human	ensembl	69_37n	-1	known	silent	c.2130	p.P710	0.811	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496	40	0	0.00	44	9	16.67	-	-	-
TRHDE	0	genome.wustl.edu	37	12	72956762	72956762	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	12	72956762	72956762	C	G	SNP	TRHDE	ENST00000261180	human	ensembl	69_37n	+1	known	missense	c.1849	p.Q617E	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	62	0	0.00	73	20	21.51	-	-	-
TRIM11	0	genome.wustl.edu	37	1	228582831	228582831	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	1	228582831	228582831	C	T	SNP	TRIM11	ENST00000284551	human	ensembl	69_37n	-1	known	missense	c.982	p.G328S	0.044	superfamily_ConA-like_lec_gl,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM11	HGNC	ENSG00000154370	32	0	0.00	38	11	22.45	-	-	-
ZMYM3	0	genome.wustl.edu	37	X	70461089	70461089	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A141-01A-11D-A10Y-09	TCGA-D8-A141-10A-01D-A110-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	807791d8-b6c0-4722-bf5c-d5fa30baffc6	8bd52c2f-131d-40cc-8c24-f8021128cb93	X	70461089	70461089	T	C	SNP	ZMYM3	ENST00000373988	human	ensembl	69_37n	-1	known	missense	c.3914	p.Y1305C	1.000	pfam_DUF3504	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH	-	no_errors	ZMYM3	HGNC	ENSG00000147130	315	0	0.00	282	47	14.29	-	-	-
