Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB7	0	genome.wustl.edu	37	X	74376106	74376106	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	74376106	74376106	A	G	SNP	ABCB7	ENST00000253577	human	ensembl	69_37n	-1	known	missense	c.2	p.M1T	1.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB7	HGNC	ENSG00000131269	10	0	0.00	5	4	44.44	-	-	-
ANKRA2	0	genome.wustl.edu	37	5	72858604	72858604	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	5	72858604	72858604	G	A	SNP	ANKRA2	ENST00000296785	human	ensembl	69_37n	-1	known	missense	c.103	p.P35S	0.085	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRA2	HGNC	ENSG00000164331	83	0	0.00	54	8	12.70	-	-	-
ANO6	0	genome.wustl.edu	37	12	45781974	45781974	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	45781974	45781974	G	A	SNP	ANO6	ENST00000425752	human	ensembl	69_37n	+1	known	missense	c.1196	p.R399H	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO6	HGNC	ENSG00000177119	75	0	0.00	65	12	15.38	-	-	-
APCDD1L	0	genome.wustl.edu	37	20	57036021	57036021	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	57036021	57036021	C	T	SNP	APCDD1L	ENST00000439429	human	ensembl	69_37n	-1	known	missense	c.1364	p.R455H	0.994	NULL	NULL	-	no_errors	APCDD1L	HGNC	ENSG00000198768	48	0	0.00	17	7	29.17	-	-	-
ARID5B	0	genome.wustl.edu	37	10	63851397	63851397	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	10	63851397	63851397	G	C	SNP	ARID5B	ENST00000279873	human	ensembl	69_37n	+1	known	missense	c.2175	p.R725S	0.998	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5B	HGNC	ENSG00000150347	49	0	0.00	33	8	19.51	-	-	-
BMP8A	0	genome.wustl.edu	37	1	39988145	39988145	+	Silent	SNP	T	T	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	39988145	39988145	T	C	SNP	BMP8A	ENST00000331593	human	ensembl	69_37n	+1	known	silent	c.939	p.L313	0.010	pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP8A	HGNC	ENSG00000183682	50	0	0.00	16	2	11.11	-	-	-
C20orf132	0	genome.wustl.edu	37	20	35731179	35731179	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	35731179	35731179	G	C	SNP	C20orf132	ENST00000400441	human	ensembl	69_37n	-1	known	missense	c.3040	p.L1014V	0.996	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C20orf132	HGNC	ENSG00000101353	84	0	0.00	35	48	57.83	-	-	-
CCNB3	0	genome.wustl.edu	37	X	50031866	50031866	+	Silent	SNP	A	A	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	50031866	50031866	A	C	SNP	CCNB3	ENST00000276014	human	ensembl	69_37n	+1	known	silent	c.183	p.S61	0.998	NULL	pfam_Cyclin_N,pfam_Cyclin_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	69	0	0.00	62	16	20.51	-	-	-
CELA3B	0	genome.wustl.edu	37	1	22304922	22304922	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	22304922	22304922	C	T	SNP	CELA3B	ENST00000337107	human	ensembl	69_37n	+1	known	missense	c.104	p.A35V	0.979	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6	pfam_Peptidase_S1_S6,superfamily_Pept_cys/ser_Trypsin-like,smart_Peptidase_S1_S6,pfscan_Peptidase_S1_S6,prints_Peptidase_S1A	-	no_errors	CELA3B	HGNC	ENSG00000219073	143	0	0.00	29	36	55.38	-	-	-
CLCN5	0	genome.wustl.edu	37	X	49845354	49845354	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	49845354	49845354	G	A	SNP	CLCN5	ENST00000376088	human	ensembl	69_37n	+1	known	missense	c.707	p.C236Y	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_Cysta_beta_synth_core,superfamily_Cl-channel_core,smart_Cysta_beta_synth_core,prints_Cl-channel_volt-gated,prints_Cl_channel-5	-	no_errors	CLCN5	HGNC	ENSG00000171365	129	0	0.00	79	15	15.96	-	-	-
CLU	0	genome.wustl.edu	37	8	27461880	27461880	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	8	27461880	27461880	T	C	SNP	CLU	ENST00000560366	human	ensembl	69_37n	-1	known	missense	c.1018	p.I340V	1.000	pfam_Clusterin-like,smart_Clusterin_C	pfam_Clusterin-like,smart_Clusterin_N,smart_Clusterin_C	-	no_errors	CLU	HGNC	ENSG00000120885	56	0	0.00	16	29	64.44	-	-	-
COL6A3	0	genome.wustl.edu	37	2	238253585	238253585	+	Silent	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	2	238253585	238253585	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	69_37n	-1	known	silent	c.7173	p.Y2391	0.286	NULL	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	70	0	0.00	58	11	15.94	-	-	-
COMMD7	0	genome.wustl.edu	37	20	31294404	31294404	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	20	31294404	31294404	G	A	SNP	COMMD7	ENST00000278980	human	ensembl	69_37n	-1	known	missense	c.317	p.A106V	1.000	pfam_HCaRG	pfam_HCaRG	-	no_errors	COMMD7	HGNC	ENSG00000149600	74	0	0.00	40	33	45.21	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16949330	16949331	+	RNA	INS	-	-	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	16949330	16949331	-	A	INS	CROCCP2	ENST00000421700	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.186:0.186	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	9	0	0.00	10	4	28.57	-	-	-
DENND5B	0	genome.wustl.edu	37	12	31579329	31579329	+	Silent	SNP	T	T	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	31579329	31579329	T	C	SNP	DENND5B	ENST00000306833	human	ensembl	69_37n	-1	known	silent	c.2241	p.G747	0.740	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_LipOase_LH2,pfscan_Run	-	no_errors	DENND5B	HGNC	ENSG00000170456	77	0	0.00	47	16	25.40	-	-	-
DLC1	0	genome.wustl.edu	37	8	12956964	12956964	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	8	12956964	12956964	G	T	SNP	DLC1	ENST00000276297	human	ensembl	69_37n	-1	known	missense	c.2882	p.P961H	0.996	NULL	pfam_START_lipid-bd,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd,pfscan_START_lipid-bd,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	139	0	0.00	96	70	42.17	-	-	-
DMPK	0	genome.wustl.edu	37	19	46282601	46282601	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	19	46282601	46282601	T	G	SNP	DMPK	ENST00000343373	human	ensembl	69_37n	-1	known	missense	c.383	p.E128A	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_cat_dom	-	no_errors	DMPK	HGNC	ENSG00000104936	76	0	0.00	25	21	45.65	-	-	-
DSCAM	0	genome.wustl.edu	37	21	41710185	41710185	+	Silent	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	21	41710185	41710185	G	A	SNP	DSCAM	ENST00000400454	human	ensembl	69_37n	-1	known	silent	c.1626	p.N542	0.092	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	DSCAM	HGNC	ENSG00000171587	100	0	0.00	58	24	29.27	-	-	-
EGFR	0	genome.wustl.edu	37	7	55211097	55211097	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	7	55211097	55211097	G	A	SNP	EGFR	ENST00000275493	human	ensembl	69_37n	+1	known	missense	c.340	p.E114K	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	EGFR	HGNC	ENSG00000146648	51	0	0.00	26	26	50.00	-	-	-
FAM122C	0	genome.wustl.edu	37	X	133979418	133979418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	133979418	133979418	A	-	DEL	FAM122C	ENST00000370784	human	ensembl	69_37n	+1	known	frame_shift_del	c.332	p.G112fs	0.148	NULL	NULL	-	no_errors	FAM122C	HGNC	ENSG00000156500	21	0	0.00	11	5	29.41	-	-	-
FHOD3	0	genome.wustl.edu	37	18	34297797	34297797	+	Missense_Mutation	SNP	T	T	G			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	18	34297797	34297797	T	G	SNP	FHOD3	ENST00000257209	human	ensembl	69_37n	+1	known	missense	c.2011	p.L671V	0.962	NULL	pfam_FH2_actin-bd,superfamily_FH2_actin-bd,superfamily_ARM-type_fold,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	FHOD3	HGNC	ENSG00000134775	92	0	0.00	62	23	27.06	-	-	-
FKBP15	0	genome.wustl.edu	37	9	115931891	115931891	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	9	115931891	115931891	G	-	DEL	FKBP15	ENST00000238256	human	ensembl	69_37n	-1	known	frame_shift_del	c.3098	p.P1033fs	0.148	NULL	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321	76	0	0.00	8	2	20.00	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23685064	23685064	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	15	23685064	23685064	A	G	SNP	GOLGA6L2	ENST00000567107	human	ensembl	69_37n	-1	putative	missense	c.2558	p.V853A	0.000	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	33	0	0.00	28	6	17.65	-	-	-
GRIPAP1	0	genome.wustl.edu	37	X	48853758	48853758	+	Silent	SNP	T	T	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	48853758	48853758	T	A	SNP	GRIPAP1	ENST00000376441	human	ensembl	69_37n	-1	known	silent	c.210	p.V70	0.863	NULL	superfamily_Prefoldin	-	no_errors	GRIPAP1	HGNC	ENSG00000068400	86	0	0.00	43	15	25.86	-	-	-
GRM5	0	genome.wustl.edu	37	11	88583174	88583174	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	88583174	88583174	C	T	SNP	GRM5	ENST00000305447	human	ensembl	69_37n	-1	known	missense	c.811	p.A271T	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_5,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_1	-	no_errors	GRM5	HGNC	ENSG00000168959	56	0	0.00	30	14	31.82	-	-	-
IL22RA2	0	genome.wustl.edu	37	6	137482869	137482869	+	Silent	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	6	137482869	137482869	G	A	SNP	IL22RA2	ENST00000296980	human	ensembl	69_37n	-1	known	silent	c.18	p.C6	0.643	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3	-	no_errors	IL22RA2	HGNC	ENSG00000164485	40	0	0.00	17	15	46.88	-	-	-
KDM4E	0	genome.wustl.edu	37	11	94759549	94759549	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	94759549	94759549	C	A	SNP	KDM4E	ENST00000450979	human	ensembl	69_37n	+1	known	nonsense	c.828	p.Y276*	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4E	HGNC	ENSG00000235268	55	0	0.00	16	9	36.00	-	-	-
KIF21A	0	genome.wustl.edu	37	12	39734847	39734848	+	Frame_Shift_Ins	INS	-	-	TTAA			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	12	39734847	39734848	-	TTAA	INS	KIF21A	ENST00000395670	human	ensembl	69_37n	-1	known	frame_shift_ins	c.1971_1970	p.K657fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIF21A	HGNC	ENSG00000139116	138	0	0.00	100	16	13.79	-	-	-
MSGN1	0	genome.wustl.edu	37	2	17997955	17997955	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	2	17997955	17997955	C	T	SNP	MSGN1	ENST00000281047	human	ensembl	69_37n	+1	known	missense	c.170	p.S57F	0.700	NULL	pfam_HLH_DNA-bd,superfamily_HLH_DNA-bd,smart_HLH_DNA-bd,pfscan_HLH_DNA-bd	-	no_errors	MSGN1	HGNC	ENSG00000151379	22	0	0.00	6	5	45.45	-	-	-
OR5I1	0	genome.wustl.edu	37	11	55703086	55703086	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	55703086	55703086	G	C	SNP	OR5I1	ENST00000301532	human	ensembl	69_37n	-1	known	missense	c.791	p.P264R	0.944	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825	61	0	0.00	27	18	40.00	-	-	-
OTUB1	0	genome.wustl.edu	37	11	63753882	63753882	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	11	63753882	63753882	G	C	SNP	OTUB1	ENST00000422031	human	ensembl	69_37n	+1	known	missense	c.65	p.R22P	0.359	NULL	pfam_Peptidase_C65_otubain,pfam_OTU,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	-	no_errors	OTUB1	HGNC	ENSG00000167770	17	0	0.00	12	4	25.00	-	-	-
PCDHA2	0	genome.wustl.edu	37	5	140174848	140174848	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	5	140174848	140174848	C	T	SNP	PCDHA2	ENST00000526136	human	ensembl	69_37n	+1	known	missense	c.299	p.A100V	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	66	0	0.00	24	7	22.58	-	-	-
PER1	0	genome.wustl.edu	37	17	8051116	8051116	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	17	8051116	8051116	G	A	SNP	PER1	ENST00000317276	human	ensembl	69_37n	-1	known	missense	c.1264	p.H422Y	1.000	pfam_PAS_fold_3	pfam_Period_circadian-like_C,pfam_PAS_fold_3,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094	41	0	0.00	5	6	54.55	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178927430	178927430	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	178927430	178927430	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1193	p.R398H	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	105	0	0.00	72	19	20.88	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	31	0	0.00	16	19	54.29	-	-	-
PTPN22	0	genome.wustl.edu	37	1	114377000	114377000	+	Silent	SNP	T	T	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	114377000	114377000	T	A	SNP	PTPN22	ENST00000359785	human	ensembl	69_37n	-1	known	silent	c.1956	p.T652	0.100	pirsf_Non-rcpt_Tyr_Pase_8/22	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Non-rcpt_Tyr_Pase_8/22,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN22	HGNC	ENSG00000134242	81	0	0.00	67	14	17.28	-	-	-
RBMX	0	genome.wustl.edu	37	X	135960146	135960147	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	135960146	135960147	-	AA	INS	RBMX	ENST00000320676	human	ensembl	69_37n	-1	known	frame_shift_ins	c.316_315	p.P105fs	1.000:1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX	HGNC	ENSG00000147274	67	0	0.00	69	10	12.66	-	-	-
SAGE1	0	genome.wustl.edu	37	X	134992588	134992588	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	X	134992588	134992588	C	T	SNP	SAGE1	ENST00000324447	human	ensembl	69_37n	+1	known	missense	c.1879	p.H627Y	0.018	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433	85	0	0.00	64	9	12.33	-	-	-
SCN2A	0	genome.wustl.edu	37	2	166221684	166221684	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	2	166221684	166221684	G	A	SNP	SCN2A	ENST00000283256	human	ensembl	69_37n	+1	known	missense	c.3431	p.S1144N	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	39	0	0.00	24	10	29.41	-	-	-
SRSF11	0	genome.wustl.edu	37	1	70712533	70712533	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	1	70712533	70712533	G	C	SNP	SRSF11	ENST00000370950	human	ensembl	69_37n	+1	known	missense	c.965	p.R322P	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF11	HGNC	ENSG00000116754	72	0	0.00	47	9	16.07	-	-	-
TNRC6B	0	genome.wustl.edu	37	22	40661738	40661738	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	22	40661738	40661738	A	G	SNP	TNRC6B	ENST00000454349	human	ensembl	69_37n	+1	known	missense	c.1504	p.M502V	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354	34	0	0.00	7	5	41.67	-	-	-
TP53	0	genome.wustl.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	17	7578394	7578394	T	C	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.536	p.H179R	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	61	0	0.00	12	15	55.56	-	-	-
UBAP2	0	genome.wustl.edu	37	9	33923840	33923841	+	In_Frame_Ins	INS	-	-	GGG			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	9	33923840	33923841	-	GGG	INS	UBAP2	ENST00000360802	human	ensembl	69_37n	-1	known	in_frame_ins	c.2749_2748	p.916in_frame_insP	1.000:1.000	NULL	pfam_DUF3697_Uba2,pfam_UBA/transl_elong_EF1B_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP2	HGNC	ENSG00000137073	243	0	0.00	36	5	12.20	-	-	-
USP10	0	genome.wustl.edu	37	16	84778300	84778300	+	Missense_Mutation	SNP	G	G	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	16	84778300	84778300	G	T	SNP	USP10	ENST00000570191	human	ensembl	69_37n	+1	known	missense	c.225	p.L75F	0.138	NULL	pfam_Peptidase_C19,pfam_Ataxin-2_C,pfscan_Peptidase_C19	-	no_errors	USP10	HGNC	ENSG00000103194	67	0	0.00	48	17	26.15	-	-	-
ZNF564	0	genome.wustl.edu	37	19	12639170	12639171	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D8-A1JF-01A-11D-A13L-09	TCGA-D8-A1JF-10A-01D-A17G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	d31358da-639c-4fe5-9f7c-c17c31fd2865	0917f25a-6777-491e-9ecd-64183b063739	19	12639170	12639171	-	T	INS	ZNF564	ENST00000339282	human	ensembl	69_37n	-1	known	frame_shift_ins	c.139_138	p.W46fs	0.833:0.789	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF564	HGNC	ENSG00000249709	77	0	0.00	35	20	36.36	-	-	-
