Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAM29	0	genome.wustl.edu	37	4	175897708	175897708	+	Silent	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	4	175897708	175897708	G	A	SNP	ADAM29	ENST00000359240	human	ensembl	69_37n	+1	known	silent	c.1032	p.E344	0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM29	HGNC	ENSG00000168594	38	0	0.00	31	60	65.93	-	-	-
ALDOC	0	genome.wustl.edu	37	17	26901258	26901258	+	Missense_Mutation	SNP	A	A	G			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	17	26901258	26901258	A	G	SNP	ALDOC	ENST00000226253	human	ensembl	69_37n	-1	known	missense	c.626	p.V209A	1.000	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOC	HGNC	ENSG00000109107	27	0	0.00	42	19	31.15	-	-	-
CASP4	0	genome.wustl.edu	37	11	104825700	104825700	+	Missense_Mutation	SNP	C	C	G			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	11	104825700	104825700	C	G	SNP	CASP4	ENST00000444739	human	ensembl	69_37n	-1	known	missense	c.36	p.K12N	0.009	pfam_CARD,superfamily_DEATH-like,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_cat,pfam_CARD,superfamily_DEATH-like,smart_CARD,smart_Pept_C14_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14_p45_core	-	no_errors	CASP4	HGNC	ENSG00000196954	56	0	0.00	40	31	43.66	-	-	-
CNTRL	0	genome.wustl.edu	37	9	123930557	123930557	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	9	123930557	123930557	G	A	SNP	CNTRL	ENST00000238341	human	ensembl	69_37n	+1	known	missense	c.6028	p.E2010K	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397	68	0	0.00	36	62	63.27	-	-	-
CRIM1	0	genome.wustl.edu	37	2	36583699	36583699	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	2	36583699	36583699	G	C	SNP	CRIM1	ENST00000428774	human	ensembl	69_37n	+1	putative	missense	c.86	p.C29S	1.000	NULL	NULL	-	no_start_codon:no_stop_codon:bad_bp_length_for_coding_region	CRIM1	HGNC	ENSG00000150938	12	0	0.00	5	4	44.44	-	-	-
DCAF7	0	genome.wustl.edu	37	17	61662631	61662631	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	17	61662631	61662631	G	A	SNP	DCAF7	ENST00000310827	human	ensembl	69_37n	+1	known	missense	c.797	p.R266Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF7	HGNC	ENSG00000136485	61	0	0.00	76	27	26.21	-	-	-
DHX37	0	genome.wustl.edu	37	12	125448967	125448967	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	12	125448967	125448967	C	T	SNP	DHX37	ENST00000308736	human	ensembl	69_37n	-1	known	missense	c.2018	p.G673E	1.000	pfam_Helicase_C,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	41	0	0.00	22	17	43.59	-	-	-
FAM174A	0	genome.wustl.edu	37	5	99871633	99871633	+	Silent	SNP	C	C	G			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	5	99871633	99871633	C	G	SNP	FAM174A	ENST00000312637	human	ensembl	69_37n	+1	known	silent	c.399	p.G133	1.000	pfam_DUF1180	pfam_DUF1180	-	no_errors	FAM174A	HGNC	ENSG00000174132	14	0	0.00	9	12	57.14	-	-	-
GATA3	0	genome.wustl.edu	37	10	8115711	8115711	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	10	8115711	8115711	C	-	DEL	GATA3	ENST00000379328	human	ensembl	69_37n	+1	known	frame_shift_del	c.1060	p.L355fs	1.000	smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	34	0	0.00	26	13	32.50	-	-	-
IFT74	0	genome.wustl.edu	37	9	26988692	26988692	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	9	26988692	26988692	C	T	SNP	IFT74	ENST00000380062	human	ensembl	69_37n	+1	known	missense	c.491	p.T164I	1.000	NULL	NULL	-	no_errors	IFT74	HGNC	ENSG00000096872	17	0	0.00	24	18	42.86	-	-	-
IREB2	0	genome.wustl.edu	37	15	78775776	78775776	+	Silent	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	15	78775776	78775776	G	A	SNP	IREB2	ENST00000258886	human	ensembl	69_37n	+1	known	silent	c.1413	p.K471	1.000	pfam_Acoase/IPM_deHydtase_lsu_aba,superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	87	0	0.00	59	34	36.17	-	-	-
KALRN	0	genome.wustl.edu	37	3	124438238	124438238	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	3	124438238	124438238	G	A	SNP	KALRN	ENST00000360013	human	ensembl	69_37n	+1	known	missense	c.8882	p.R2961H	1.000	superfamily_Kinase-like_dom	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	19	0	0.00	5	7	58.33	-	-	-
LGR6	0	genome.wustl.edu	37	1	202249911	202249911	+	Missense_Mutation	SNP	A	A	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	1	202249911	202249911	A	T	SNP	LGR6	ENST00000367278	human	ensembl	69_37n	+1	known	missense	c.647	p.H216L	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_7TM_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067	65	0	0.00	65	143	68.75	-	-	-
LINS	0	genome.wustl.edu	37	15	101115307	101115307	+	Silent	SNP	A	A	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	15	101115307	101115307	A	T	SNP	LINS	ENST00000314742	human	ensembl	69_37n	-1	known	silent	c.516	p.A172	0.601	NULL	NULL	-	no_errors	LINS	HGNC	ENSG00000140471	53	0	0.00	33	23	41.07	-	-	-
MLL3	0	genome.wustl.edu	37	7	151843775	151843776	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	7	151843775	151843776	TT	-	DEL	MLL3	ENST00000355193	human	ensembl	69_37n	-1	known	frame_shift_del	c.14111_14110	p.K4704fs	0.004:0.003	pfam_FYrich_C,smart_FYrich_C	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_superfamily,smart_Znf_PHD,smart_Znf_RING,smart_HMG_superfamily,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	MLL3	HGNC	ENSG00000055609	41	0	0.00	27	23	46.00	-	-	-
MPHOSPH8	0	genome.wustl.edu	37	13	20237220	20237220	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	13	20237220	20237220	C	T	SNP	MPHOSPH8	ENST00000414242	human	ensembl	69_37n	+1	known	missense	c.1973	p.A658V	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Chromo_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Chromo_domain/shadow	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199	94	0	0.00	55	11	15.94	-	-	-
MUC16	0	genome.wustl.edu	37	19	9085003	9085003	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	19	9085003	9085003	G	A	SNP	MUC16	ENST00000397910	human	ensembl	69_37n	-1	known	missense	c.6812	p.T2271I	0.026	NULL	pfam_SEA,smart_SEA,pfscan_SEA	-	no_errors	MUC16	HGNC	ENSG00000181143	51	0	0.00	44	21	32.31	-	-	-
NEK8	0	genome.wustl.edu	37	17	27064381	27064381	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	17	27064381	27064381	C	T	SNP	NEK8	ENST00000268766	human	ensembl	69_37n	+1	known	missense	c.676	p.R226W	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Reg_csome_cond/b-lactamase_inh,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_cat_dom,prints_Reg_chr_condens,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK8	HGNC	ENSG00000160602	42	0	0.00	44	12	21.43	-	-	-
NOVA1	0	genome.wustl.edu	37	14	26939694	26939694	+	Silent	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	14	26939694	26939694	C	T	SNP	NOVA1	ENST00000344429	human	ensembl	69_37n	-1	known	silent	c.522	p.K174	0.001	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910	137	0	0.00	139	43	23.63	-	-	-
OR8S1	0	genome.wustl.edu	37	12	48919779	48919779	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	12	48919779	48919779	G	A	SNP	OR8S1	ENST00000310194	human	ensembl	69_37n	+1	known	missense	c.365	p.R122H	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR8S1	HGNC	ENSG00000197376	91	0	0.00	94	33	25.98	-	-	-
PCDHGB7	0	genome.wustl.edu	37	5	140798223	140798223	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	5	140798223	140798223	C	A	SNP	PCDHGB7	ENST00000398594	human	ensembl	69_37n	+1	known	missense	c.797	p.A266D	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122	29	0	0.00	19	4	17.39	-	-	-
PLK2	0	genome.wustl.edu	37	5	57750566	57750568	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	5	57750566	57750568	GAT	-	DEL	PLK2	ENST00000274289	human	ensembl	69_37n	-1	known	in_frame_del	c.1902_1900	p.I634in_frame_del	1.000:1.000:1.000	pfam_POLO_box_duplicated_dom,pfscan_POLO_box_duplicated_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	PLK2	HGNC	ENSG00000145632	91	0	0.00	150	31	17.03	-	-	-
POU3F4	0	genome.wustl.edu	37	X	82764246	82764246	+	Missense_Mutation	SNP	C	C	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	X	82764246	82764246	C	T	SNP	POU3F4	ENST00000373200	human	ensembl	69_37n	+1	known	missense	c.914	p.A305V	1.000	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pirsf_Transcription_factor_POU,pfscan_Homeodomain	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pirsf_Transcription_factor_POU,pfscan_Homeodomain,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767	27	0	0.00	17	8	32.00	-	-	-
PSMD5	0	genome.wustl.edu	37	9	123593673	123593673	+	Missense_Mutation	SNP	T	T	C			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	9	123593673	123593673	T	C	SNP	PSMD5	ENST00000210313	human	ensembl	69_37n	-1	known	missense	c.497	p.N166S	1.000	pfam_26S_Psome_nonATP_su5,superfamily_ARM-type_fold	pfam_26S_Psome_nonATP_su5,superfamily_ARM-type_fold	-	no_errors	PSMD5	HGNC	ENSG00000095261	74	0	0.00	112	55	32.93	-	-	-
RNF148	0	genome.wustl.edu	37	7	122342439	122342439	+	Missense_Mutation	SNP	C	C	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	7	122342439	122342439	C	A	SNP	RNF148	ENST00000434824	human	ensembl	69_37n	-1	known	missense	c.366	p.K122N	0.997	pfam_Protease-assoc_domain	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF148	HGNC	ENSG00000235631	56	0	0.00	50	32	39.02	-	-	-
RYR2	0	genome.wustl.edu	37	1	237608772	237608772	+	Silent	SNP	C	C	G			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	1	237608772	237608772	C	G	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	silent	c.1236	p.R412	0.566	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	113	0	0.00	221	36	14.01	-	-	-
TFF2	0	genome.wustl.edu	37	21	43767728	43767728	+	Silent	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	21	43767728	43767728	G	A	SNP	TFF2	ENST00000291526	human	ensembl	69_37n	-1	known	silent	c.243	p.C81	0.632	pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil	pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,prints_P_trefoil_chordata	-	no_errors	TFF2	HGNC	ENSG00000160181	31	0	0.00	19	12	38.71	-	-	-
TPP2	0	genome.wustl.edu	37	13	103301465	103301465	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	13	103301465	103301465	A	C	SNP	TPP2	ENST00000376065	human	ensembl	69_37n	+1	known	missense	c.2837	p.N946T	0.998	pfam_Peptidase_S8A_TPPII	pfam_Peptidase_S8/S53,pfam_Peptidase_S8A_TPPII,superfamily_Peptidase_S8/S53,prints_Peptidase_S8_subtilisin-rel	-	no_errors	TPP2	HGNC	ENSG00000134900	34	0	0.00	21	11	34.38	-	-	-
TRPM4	0	genome.wustl.edu	37	19	49700060	49700061	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	19	49700060	49700061	-	T	INS	TRPM4	ENST00000252826	human	ensembl	69_37n	+1	known	frame_shift_ins	c.2574_2575	p.Y858fs	0.967:1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529	16	0	0.00	6	3	33.33	-	-	-
VCPIP1	0	genome.wustl.edu	37	8	67578573	67578573	+	Missense_Mutation	SNP	A	A	C			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	8	67578573	67578573	A	C	SNP	VCPIP1	ENST00000310421	human	ensembl	69_37n	-1	known	missense	c.621	p.C207W	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	VCPIP1	HGNC	ENSG00000175073	34	0	0.00	65	15	18.75	-	-	-
WBSCR17	0	genome.wustl.edu	37	7	71142235	71142235	+	Missense_Mutation	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	7	71142235	71142235	G	A	SNP	WBSCR17	ENST00000333538	human	ensembl	69_37n	+1	known	missense	c.1444	p.G482R	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274	61	0	0.00	46	38	45.24	-	-	-
ZNF208	0	genome.wustl.edu	37	19	22156855	22156855	+	Silent	SNP	G	G	A			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	19	22156855	22156855	G	A	SNP	ZNF208	ENST00000397126	human	ensembl	69_37n	-1	known	silent	c.981	p.T327	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	42	0	0.00	46	12	20.69	-	-	-
ZNF609	0	genome.wustl.edu	37	15	64915230	64915230	+	Missense_Mutation	SNP	G	G	C			TCGA-D8-A1JT-01A-31D-A13L-09	TCGA-D8-A1JT-10A-01D-A13O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	3be3972f-4125-44c3-94d6-0ddba2008fcf	6d5d4c16-d571-4ad1-b5d7-e8cbc3736afb	15	64915230	64915230	G	C	SNP	ZNF609	ENST00000326648	human	ensembl	69_37n	+1	known	missense	c.952	p.V318L	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357	47	0	0.00	38	15	28.30	-	-	-
