Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
AADAC	0	genome.wustl.edu	37	3	151535239	151535239	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	3	151535239	151535239	C	A	SNP	AADAC	ENST00000232892	human	ensembl	69_37n	+1	known	nonsense	c.224	p.S75*	0.994	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pfam_CarbesteraseB,pirsf_Arylacetamide_deacetylase	-	no_errors	AADAC	HGNC	ENSG00000114771	162	0	0.00	143	68	32.23	-	-	-
ADAM21	0	genome.wustl.edu	37	14	70924450	70924450	+	Silent	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	14	70924450	70924450	C	T	SNP	ADAM21	ENST00000267499	human	ensembl	69_37n	+1	known	silent	c.234	p.V78	0.170	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC	ENSG00000139985	127	1	0.78	118	21	15.11	-	-	-
AKR7L	0	genome.wustl.edu	37	1	19595111	19595111	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	1	19595111	19595111	C	T	SNP	AKR7L	ENST00000420396	human	ensembl	69_37n	-1	known	missense	c.255	p.M85I	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	-	no_errors	AKR7L	HGNC	ENSG00000211454	49	0	0.00	33	41	55.41	-	-	-
AQP3	0	genome.wustl.edu	37	9	33443389	33443389	+	Silent	SNP	C	C	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	9	33443389	33443389	C	G	SNP	AQP3	ENST00000297991	human	ensembl	69_37n	-1	known	silent	c.303	p.L101	0.991	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_Aquaporin	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_Aquaporin	-	no_errors	AQP3	HGNC	ENSG00000165272	105	0	0.00	117	47	28.66	-	-	-
ASB15	0	genome.wustl.edu	37	7	123269363	123269363	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	123269363	123269363	G	A	SNP	ASB15	ENST00000275699	human	ensembl	69_37n	+1	known	missense	c.1315	p.G439S	1.000	pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB15	HGNC	ENSG00000146809	185	0	0.00	216	28	11.48	-	-	-
ATP11A	0	genome.wustl.edu	37	13	113474225	113474225	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	13	113474225	113474225	G	A	SNP	ATP11A	ENST00000375630	human	ensembl	69_37n	+1	known	missense	c.686	p.R229H	1.000	pfam_ATPase_P-typ_ATPase-assoc-dom,tigrfam_ATPase_P-typ_Plipid-transl	pfam_ATPase_P-typ_ATPase-assoc-dom,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP11A	HGNC	ENSG00000068650	92	0	0.00	56	72	56.25	-	-	-
CRLF3	0	genome.wustl.edu	37	17	29123274	29123274	+	Silent	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	17	29123274	29123274	G	A	SNP	CRLF3	ENST00000324238	human	ensembl	69_37n	-1	known	silent	c.507	p.D169	1.000	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CRLF3	HGNC	ENSG00000176390	167	0	0.00	79	105	57.07	-	-	-
CXorf57	0	genome.wustl.edu	37	X	105905447	105905447	+	Silent	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	X	105905447	105905447	G	A	SNP	CXorf57	ENST00000372548	human	ensembl	69_37n	+1	known	silent	c.2181	p.A727	0.707	NULL	superfamily_NA-bd_OB-fold-like	-	no_errors	CXorf57	HGNC	ENSG00000147231	128	0	0.00	111	53	32.32	-	-	-
DGKB	0	genome.wustl.edu	37	7	14797340	14797340	+	Silent	SNP	T	T	C			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	14797340	14797340	T	C	SNP	DGKB	ENST00000258767	human	ensembl	69_37n	-1	known	silent	c.87	p.L29	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_Ca-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_HAND_2,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	144	0	0.00	99	34	25.56	-	-	-
ERCC6L	0	genome.wustl.edu	37	X	71425081	71425081	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	X	71425081	71425081	G	T	SNP	ERCC6L	ENST00000334463	human	ensembl	69_37n	-1	known	missense	c.3536	p.P1179H	0.007	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_TPR-contain_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6L	HGNC	ENSG00000186871	228	0	0.00	195	93	32.29	-	-	-
FAT2	0	genome.wustl.edu	37	5	150946518	150946518	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	5	150946518	150946518	C	A	SNP	FAT2	ENST00000261800	human	ensembl	69_37n	-1	known	missense	c.1975	p.V659L	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	167	0	0.00	208	89	29.77	-	-	-
HIST1H2AE	0	genome.wustl.edu	37	6	26217379	26217379	+	Silent	SNP	G	G	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	6	26217379	26217379	G	T	SNP	HIST1H2AE	ENST00000303910	human	ensembl	69_37n	+1	known	silent	c.177	p.L59	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AE	HGNC	ENSG00000168274	61	0	0.00	88	15	14.56	-	-	-
HOOK2	0	genome.wustl.edu	37	19	12876942	12876942	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	12876942	12876942	G	A	SNP	HOOK2	ENST00000397668	human	ensembl	69_37n	-1	known	missense	c.1486	p.R496C	0.642	pfam_HOOK	pfam_HOOK,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066	13	0	0.00	17	5	22.73	-	-	-
HRSP12	0	genome.wustl.edu	37	8	99118536	99118536	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	8	99118536	99118536	C	T	SNP	HRSP12	ENST00000254878	human	ensembl	69_37n	-1	known	missense	c.190	p.E64K	1.000	pfam_YjgF/Yer057p/UK114,superfamily_Endoribo_LPSP/chorism_mut-like,tigrfam_YjgF-like	pfam_YjgF/Yer057p/UK114,superfamily_Endoribo_LPSP/chorism_mut-like,tigrfam_YjgF-like	-	no_errors	HRSP12	HGNC	ENSG00000132541	143	0	0.00	80	108	57.14	-	-	-
KRI1	0	genome.wustl.edu	37	19	10670170	10670170	+	Silent	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	10670170	10670170	C	T	SNP	KRI1	ENST00000312962	human	ensembl	69_37n	-1	known	silent	c.1077	p.L359	0.997	NULL	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	110	0	0.00	189	27	12.50	-	-	-
LAMA2	0	genome.wustl.edu	37	6	129609065	129609065	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	6	129609065	129609065	C	A	SNP	LAMA2	ENST00000421865	human	ensembl	69_37n	+1	known	missense	c.2611	p.L871I	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	191	0	0.00	241	29	10.74	-	-	-
LAMB4	0	genome.wustl.edu	37	7	107710329	107710329	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	107710329	107710329	A	C	SNP	LAMB4	ENST00000205386	human	ensembl	69_37n	-1	known	missense	c.2126	p.L709R	1.000	pfscan_Laminin_IV	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	67	0	0.00	68	31	31.00	-	-	-
MUC2	0	genome.wustl.edu	37	11	1101591	1101591	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	11	1101591	1101591	C	T	SNP	MUC2	ENST00000441003	human	ensembl	69_37n	+1	known	missense	c.7604	p.S2535F	0.011	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	95	0	0.00	66	86	56.58	-	-	-
NEK3	0	genome.wustl.edu	37	13	52707946	52707946	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	13	52707946	52707946	C	T	SNP	NEK3	ENST00000452082	human	ensembl	69_37n	-1	known	missense	c.1327	p.E443K	0.685	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK3	HGNC	ENSG00000136098	73	0	0.00	68	10	12.82	-	-	-
PCDH7	0	genome.wustl.edu	37	4	30921826	30921826	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	30921826	30921826	C	T	SNP	PCDH7	ENST00000543491	human	ensembl	69_37n	+1	known	nonsense	c.3226	p.Q1076*	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851	93	0	0.00	110	20	15.38	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	3	178952085	178952085	A	G	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.3140	p.H1047R	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	94	0	0.00	97	50	34.01	-	-	-
PIWIL1	0	genome.wustl.edu	37	12	130834441	130834441	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	12	130834441	130834441	G	A	SNP	PIWIL1	ENST00000245255	human	ensembl	69_37n	+1	known	missense	c.973	p.D325N	1.000	pfam_PAZ,superfamily_PAZ,smart_PAZ,pfscan_PAZ	pfam_Piwi,pfam_PAZ,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	80	0	0.00	140	55	28.21	-	-	-
POTED	0	genome.wustl.edu	37	21	15011930	15011930	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	21	15011930	15011930	G	C	SNP	POTED	ENST00000299443	human	ensembl	69_37n	+1	known	missense	c.1504	p.E502Q	0.018	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	POTED	HGNC	ENSG00000166351	212	0	0.00	190	125	39.68	-	-	-
POU6F2	0	genome.wustl.edu	37	7	39500226	39500226	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	7	39500226	39500226	C	T	SNP	POU6F2	ENST00000403058	human	ensembl	69_37n	+1	known	missense	c.1483	p.R495C	1.000	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeodomain,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536	51	0	0.00	60	27	31.03	-	-	-
PRR5-ARHGAP8	0	genome.wustl.edu	37	22	45204250	45204250	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	22	45204250	45204250	C	T	SNP	PRR5-ARHGAP8	ENST00000515632	human	ensembl	69_37n	+1	putative	missense	c.392	p.T131M	0.996	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_RhoGAP_dom,pfam_CRAL-TRIO_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_RhoGAP_dom,pfscan_CRAL-TRIO_dom,pfscan_RhoGAP_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PRR5-ARHGAP8	HGNC	ENSG00000248405	88	0	0.00	131	15	10.27	-	-	-
PSMG2	0	genome.wustl.edu	37	18	12706699	12706699	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	18	12706699	12706699	G	A	SNP	PSMG2	ENST00000317615	human	ensembl	69_37n	+1	known	missense	c.208	p.E70K	1.000	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	pfam_Proteasome_assmbl_chaperone_2,pirsf_Proteasome_assmbl_chp_2_euk	-	no_errors	PSMG2	HGNC	ENSG00000128789	191	0	0.00	226	46	16.91	-	-	-
RAPGEF6	0	genome.wustl.edu	37	5	130834231	130834231	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	5	130834231	130834231	C	G	SNP	RAPGEF6	ENST00000509018	human	ensembl	69_37n	-1	known	missense	c.1324	p.D442H	1.000	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_PDZ,pfam_Ras-assoc,pfam_cNMP-bd_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF6	HGNC	ENSG00000158987	159	0	0.00	77	184	70.50	-	-	-
TBP	0	genome.wustl.edu	37	6	170871055	170871055	+	Silent	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	6	170871055	170871055	G	A	SNP	TBP	ENST00000230354	human	ensembl	69_37n	+1	known	silent	c.231	p.Q77	0.993	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	26	0	0.00	26	7	20.59	-	-	-
TEP1	0	genome.wustl.edu	37	14	20863645	20863645	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	14	20863645	20863645	T	G	SNP	TEP1	ENST00000262715	human	ensembl	69_37n	-1	known	missense	c.1892	p.Q631P	0.774	pfam_TROVE,pfscan_TROVE	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566	167	0	0.00	126	75	37.13	-	-	-
TET2	0	genome.wustl.edu	37	4	106190828	106190828	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	106190828	106190828	C	T	SNP	TET2	ENST00000380013	human	ensembl	69_37n	+1	known	missense	c.4106	p.S1369L	1.000	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769	116	0	0.00	51	61	54.46	-	-	-
UBC	0	genome.wustl.edu	37	12	125396964	125396964	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	12	125396964	125396964	G	A	SNP	UBC	ENST00000339647	human	ensembl	69_37n	-1	known	missense	c.1354	p.R452C	1.000	pfam_Ubiquitin,smart_Ubiquitin,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin,pfam_SUMO,smart_Ubiquitin,pfscan_Ubiquitin_supergroup,prints_Ubiquitin_subgr	-	no_errors	UBC	HGNC	ENSG00000150991	85	0	0.00	111	47	29.75	-	-	-
USP8	0	genome.wustl.edu	37	15	50782646	50782646	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	15	50782646	50782646	C	G	SNP	USP8	ENST00000307179	human	ensembl	69_37n	+1	known	missense	c.2158	p.P720A	1.000	NULL	pfam_Peptidase_C19,pfam_DUF1873,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_WW_Rsp5_WWP,pfscan_Rhodanese-like_dom,pfscan_Peptidase_C19	-	no_errors	USP8	HGNC	ENSG00000138592	157	0	0.00	93	87	48.33	-	-	-
VPS13A	0	genome.wustl.edu	37	9	79931137	79931137	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	9	79931137	79931137	A	G	SNP	VPS13A	ENST00000360280	human	ensembl	69_37n	+1	known	missense	c.4678	p.N1560D	1.000	NULL	pfam_VPSAP,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969	52	0	0.00	79	22	21.78	-	-	-
WDFY3	0	genome.wustl.edu	37	4	85657344	85657347	+	Frame_Shift_Del	DEL	ATTA	ATTA	-			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	ATTA	ATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	4	85657344	85657347	ATTA	-	DEL	WDFY3	ENST00000295888	human	ensembl	69_37n	-1	known	frame_shift_del	c.6894_6891	p.K2299fs	0.710:0.668:0.549:0.236	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	471	0	0.00	343	158	31.04	-	-	-
ZBTB3	0	genome.wustl.edu	37	11	62520584	62520584	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	11	62520584	62520584	C	T	SNP	ZBTB3	ENST00000394807	human	ensembl	69_37n	-1	known	missense	c.703	p.D235N	0.983	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB3	HGNC	ENSG00000185670	100	0	0.00	126	56	30.77	-	-	-
ZNF525	0	genome.wustl.edu	37	19	53884186	53884186	+	Silent	SNP	A	A	G			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	53884186	53884186	A	G	SNP	ZNF525	ENST00000474037	human	ensembl	69_37n	+1	putative	silent	c.354	p.K118	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF525	HGNC	ENSG00000203326	91	0	0.00	242	46	15.97	-	-	-
ZNF563	0	genome.wustl.edu	37	19	12432110	12432110	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	12432110	12432110	T	C	SNP	ZNF563	ENST00000293725	human	ensembl	69_37n	-1	known	missense	c.167	p.Y56C	0.371	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF563	HGNC	ENSG00000188868	213	0	0.00	183	108	37.11	-	-	-
ZNF571	0	genome.wustl.edu	37	19	38055672	38055672	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	38055672	38055672	G	T	SNP	ZNF571	ENST00000328550	human	ensembl	69_37n	-1	known	missense	c.1658	p.T553N	0.994	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF571	HGNC	ENSG00000180479	124	0	0.00	137	89	39.38	-	-	-
ZNF85	0	genome.wustl.edu	37	19	21131813	21131813	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A10B-01A-11D-A10M-09	TCGA-E2-A10B-10A-01D-A10M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	9d712002-74cb-459a-b350-e9a4b49aac13	814d30f1-0842-4ace-86c2-fb1c50013484	19	21131813	21131813	G	C	SNP	ZNF85	ENST00000328178	human	ensembl	69_37n	+1	known	missense	c.493	p.E165Q	0.033	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	49	0	0.00	49	44	47.31	-	-	-
