Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ANKRD34C	0	genome.wustl.edu	37	15	79585975	79585975	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	15	79585975	79585975	C	T	SNP	ANKRD34C	ENST00000421388	human	ensembl	69_37n	+1	known	missense	c.349	p.R117C	0.836	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34C	HGNC	ENSG00000235711	52	0	0.00	37	26	41.27	-	-	-
ANKRD34C	0	genome.wustl.edu	37	15	79585975	79585975	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	15	79585975	79585975	C	T	SNP	ANKRD34C	ENST00000421388	human	ensembl	69_37n	+1	known	missense	c.349	p.R117C	0.836	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34C	HGNC	ENSG00000235711	59	0	0.00	37	26	41.27	-	-	-
C12orf40	0	genome.wustl.edu	37	12	40044140	40044140	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	12	40044140	40044140	T	G	SNP	C12orf40	ENST00000324616	human	ensembl	69_37n	+1	known	missense	c.670	p.F224V	0.346	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116	359	0	0.00	146	36	19.78	-	-	-
C12orf40	0	genome.wustl.edu	37	12	40044140	40044140	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	12	40044140	40044140	T	G	SNP	C12orf40	ENST00000324616	human	ensembl	69_37n	+1	known	missense	c.670	p.F224V	0.346	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116	265	0	0.00	146	36	19.78	-	-	-
CACNA1B	0	genome.wustl.edu	37	9	140952286	140952286	+	Silent	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	9	140952286	140952286	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	69_37n	+1	known	silent	c.4074	p.T1358	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	108	0	0.00	113	46	28.57	-	-	-
CACNA1B	0	genome.wustl.edu	37	9	140952286	140952286	+	Silent	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	9	140952286	140952286	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	69_37n	+1	known	silent	c.4074	p.T1358	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_HAND_2,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	158	0	0.00	113	46	28.57	-	-	-
CAT	0	genome.wustl.edu	37	11	34492955	34492955	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	11	34492955	34492955	C	T	SNP	CAT	ENST00000241052	human	ensembl	69_37n	+1	known	missense	c.1559	p.A520V	0.021	NULL	pfam_Catalase_core,pfam_Catalase_immune_responsive,superfamily_Catalase-like_dom,prints_Catalase	-	no_errors	CAT	HGNC	ENSG00000121691	183	0	0.00	145	70	32.56	-	-	-
CAT	0	genome.wustl.edu	37	11	34492955	34492955	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	11	34492955	34492955	C	T	SNP	CAT	ENST00000241052	human	ensembl	69_37n	+1	known	missense	c.1559	p.A520V	0.021	NULL	pfam_Catalase_core,pfam_Catalase_immune_responsive,superfamily_Catalase-like_dom,prints_Catalase	-	no_errors	CAT	HGNC	ENSG00000121691	290	0	0.00	145	70	32.56	-	-	-
CBFB	0	genome.wustl.edu	37	16	67070600	67070601	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	16	67070600	67070601	GA	-	DEL	CBFB	ENST00000290858	human	ensembl	69_37n	+1	known	frame_shift_del	c.224_225	p.E76fs	1.000:1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC	ENSG00000067955	193	0	0.00	97	59	37.82	-	-	-
CBFB	0	genome.wustl.edu	37	16	67070600	67070601	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	16	67070600	67070601	GA	-	DEL	CBFB	ENST00000290858	human	ensembl	69_37n	+1	known	frame_shift_del	c.224_225	p.E76fs	1.000:1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC	ENSG00000067955	258	0	0.00	97	59	37.82	-	-	-
CCDC112	0	genome.wustl.edu	37	5	114620509	114620509	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	5	114620509	114620509	G	A	SNP	CCDC112	ENST00000379611	human	ensembl	69_37n	-1	known	missense	c.214	p.R72C	0.952	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	220	0	0.00	136	57	29.53	-	-	-
CCDC112	0	genome.wustl.edu	37	5	114620509	114620509	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	5	114620509	114620509	G	A	SNP	CCDC112	ENST00000379611	human	ensembl	69_37n	-1	known	missense	c.214	p.R72C	0.952	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	240	0	0.00	136	57	29.53	-	-	-
DBH	0	genome.wustl.edu	37	9	136508616	136508616	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	9	136508616	136508616	G	A	SNP	DBH	ENST00000393056	human	ensembl	69_37n	+1	known	missense	c.826	p.V276I	0.017	pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	DBH	HGNC	ENSG00000123454	29	0	0.00	28	6	17.65	-	-	-
DBH	0	genome.wustl.edu	37	9	136508616	136508616	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	9	136508616	136508616	G	A	SNP	DBH	ENST00000393056	human	ensembl	69_37n	+1	known	missense	c.826	p.V276I	0.017	pfam_Cu2_ascorb_mOase_N,superfamily_PHM/PNGase_F_dom	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	DBH	HGNC	ENSG00000123454	46	0	0.00	28	6	17.65	-	-	-
EPHA5	0	genome.wustl.edu	37	4	66201815	66201815	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	4	66201815	66201815	C	T	SNP	EPHA5	ENST00000273854	human	ensembl	69_37n	-1	known	missense	c.2687	p.R896H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	233	1	0.43	231	60	20.62	-	-	-
EPHA5	0	genome.wustl.edu	37	4	66201815	66201815	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	4	66201815	66201815	C	T	SNP	EPHA5	ENST00000273854	human	ensembl	69_37n	-1	known	missense	c.2687	p.R896H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_cat_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	281	0	0.00	231	60	20.62	-	-	-
GABRB2	0	genome.wustl.edu	37	5	160753392	160753392	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	5	160753392	160753392	C	A	SNP	GABRB2	ENST00000274547	human	ensembl	69_37n	-1	known	missense	c.1174	p.D392Y	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,prints_GABAAa_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB2	HGNC	ENSG00000145864	390	0	0.00	230	94	29.01	-	-	-
GABRB2	0	genome.wustl.edu	37	5	160753392	160753392	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	5	160753392	160753392	C	A	SNP	GABRB2	ENST00000274547	human	ensembl	69_37n	-1	known	missense	c.1174	p.D392Y	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,prints_GABAAa_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB2	HGNC	ENSG00000145864	324	0	0.00	230	94	29.01	-	-	-
KCNQ3	0	genome.wustl.edu	37	8	133141532	133141532	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	8	133141532	133141532	T	C	SNP	KCNQ3	ENST00000388996	human	ensembl	69_37n	-1	known	missense	c.2596	p.T866A	1.000	pfam_Ankyrin-G_BS	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	43	0	0.00	84	23	20.35	-	-	-
KCNQ3	0	genome.wustl.edu	37	8	133141532	133141532	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	8	133141532	133141532	T	C	SNP	KCNQ3	ENST00000388996	human	ensembl	69_37n	-1	known	missense	c.2596	p.T866A	1.000	pfam_Ankyrin-G_BS	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_Ion_trans_2,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	76	0	0.00	84	23	20.35	-	-	-
MAPKBP1	0	genome.wustl.edu	37	15	42115928	42115928	+	Silent	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	15	42115928	42115928	C	T	SNP	MAPKBP1	ENST00000456763	human	ensembl	69_37n	+1	known	silent	c.3900	p.I1300	0.995	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	139	0	0.00	119	28	19.05	-	-	-
MST1P9	0	genome.wustl.edu	37	1	17085795	17085795	+	Silent	SNP	G	G	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	1	17085795	17085795	G	T	SNP	MST1P9	ENST00000334998	human	ensembl	69_37n	-1	known	silent	c.1026	p.I342	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1_S6,pfam_PAN-1_domain,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1_S6,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1_S6	-	no_errors	MST1P9	HGNC	ENSG00000186715	25	0	0.00	25	6	19.35	-	-	-
MTMR12	0	genome.wustl.edu	37	5	32233993	32233993	+	Silent	SNP	G	G	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	5	32233993	32233993	G	C	SNP	MTMR12	ENST00000382142	human	ensembl	69_37n	-1	known	silent	c.1560	p.T520	0.995	NULL	pfam_Myotubularin_assoc	-	no_errors	MTMR12	HGNC	ENSG00000150712	202	0	0.00	285	77	21.21	-	-	-
MTMR12	0	genome.wustl.edu	37	5	32233993	32233993	+	Silent	SNP	G	G	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	5	32233993	32233993	G	C	SNP	MTMR12	ENST00000382142	human	ensembl	69_37n	-1	known	silent	c.1560	p.T520	0.995	NULL	pfam_Myotubularin_assoc	-	no_errors	MTMR12	HGNC	ENSG00000150712	315	0	0.00	285	77	21.21	-	-	-
MUT	0	genome.wustl.edu	37	6	49416584	49416584	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	6	49416584	49416584	T	C	SNP	MUT	ENST00000274813	human	ensembl	69_37n	-1	known	missense	c.1389	p.I463M	0.991	pfam_MeMalonylCoA_mutase_a/b_cat,superfamily_Cbl-dep_enz_cat,tigrfam_MMCoA_mutase_a_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085	328	0	0.00	209	87	29.29	-	-	-
MUT	0	genome.wustl.edu	37	6	49416584	49416584	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	6	49416584	49416584	T	C	SNP	MUT	ENST00000274813	human	ensembl	69_37n	-1	known	missense	c.1389	p.I463M	0.991	pfam_MeMalonylCoA_mutase_a/b_cat,superfamily_Cbl-dep_enz_cat,tigrfam_MMCoA_mutase_a_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085	440	0	0.00	209	87	29.29	-	-	-
NACAD	0	genome.wustl.edu	37	7	45123859	45123859	+	Silent	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	7	45123859	45123859	G	A	SNP	NACAD	ENST00000490531	human	ensembl	69_37n	-1	known	silent	c.1920	p.S640	0.000	NULL	pfam_Nas_poly-pep-assoc_cplx,pfscan_Nas_poly-pep-assoc_cplx	-	no_errors	NACAD	HGNC	ENSG00000136274	27	0	0.00	51	14	21.54	-	-	-
OPRD1	0	genome.wustl.edu	37	1	29189416	29189416	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	1	29189416	29189416	C	T	SNP	OPRD1	ENST00000234961	human	ensembl	69_37n	+1	known	missense	c.740	p.S247L	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Opioid_rcpt,prints_Neuropept_W_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Delta_opi_rcpt,prints_Opioid_rcpt,prints_Neuropept_W_rcpt,prints_Somatstn_rcpt,prints_P2_purnocptor,prints_NPY_rcpt	-	no_errors	OPRD1	HGNC	ENSG00000116329	35	0	0.00	68	40	37.04	-	-	-
OPRD1	0	genome.wustl.edu	37	1	29189416	29189416	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	1	29189416	29189416	C	T	SNP	OPRD1	ENST00000234961	human	ensembl	69_37n	+1	known	missense	c.740	p.S247L	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_Opioid_rcpt,prints_Neuropept_W_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_Delta_opi_rcpt,prints_Opioid_rcpt,prints_Neuropept_W_rcpt,prints_Somatstn_rcpt,prints_P2_purnocptor,prints_NPY_rcpt	-	no_errors	OPRD1	HGNC	ENSG00000116329	112	0	0.00	68	40	37.04	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	316	1	0.32	180	52	22.41	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	375	0	0.00	180	52	22.41	-	-	-
RLTPR	0	genome.wustl.edu	37	16	67685827	67685827	+	Silent	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	16	67685827	67685827	C	T	SNP	RLTPR	ENST00000334583	human	ensembl	69_37n	+1	known	silent	c.2592	p.D864	0.968	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RLTPR	HGNC	ENSG00000159753	70	0	0.00	93	66	41.51	-	-	-
RLTPR	0	genome.wustl.edu	37	16	67685827	67685827	+	Silent	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	16	67685827	67685827	C	T	SNP	RLTPR	ENST00000334583	human	ensembl	69_37n	+1	known	silent	c.2592	p.D864	0.968	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RLTPR	HGNC	ENSG00000159753	163	0	0.00	93	66	41.51	-	-	-
SYCP1	0	genome.wustl.edu	37	1	115454161	115454161	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	1	115454161	115454161	C	T	SNP	SYCP1	ENST00000369518	human	ensembl	69_37n	+1	known	missense	c.1487	p.S496L	0.953	pfam_SCP-1	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	356	0	0.00	210	82	28.08	-	-	-
SYCP1	0	genome.wustl.edu	37	1	115454161	115454161	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	1	115454161	115454161	C	T	SNP	SYCP1	ENST00000369518	human	ensembl	69_37n	+1	known	missense	c.1487	p.S496L	0.953	pfam_SCP-1	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	370	0	0.00	210	82	28.08	-	-	-
TLL2	0	genome.wustl.edu	37	10	98129947	98129947	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	10	98129947	98129947	C	T	SNP	TLL2	ENST00000357947	human	ensembl	69_37n	-1	known	missense	c.2788	p.G930S	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pirsf_BMP_1/tolloid-like,pfscan_CUB	pfam_CUB,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd,superfamily_CUB,smart_Peptidase_Metallo,smart_CUB,smart_EGF-like_Ca-bd,smart_EGF-like,pirsf_BMP_1/tolloid-like,pfscan_CUB,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL2	HGNC	ENSG00000095587	51	0	0.00	62	15	19.48	-	-	-
TLL2	0	genome.wustl.edu	37	10	98129947	98129947	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	10	98129947	98129947	C	T	SNP	TLL2	ENST00000357947	human	ensembl	69_37n	-1	known	missense	c.2788	p.G930S	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pirsf_BMP_1/tolloid-like,pfscan_CUB	pfam_CUB,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd,superfamily_CUB,smart_Peptidase_Metallo,smart_CUB,smart_EGF-like_Ca-bd,smart_EGF-like,pirsf_BMP_1/tolloid-like,pfscan_CUB,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL2	HGNC	ENSG00000095587	74	0	0.00	62	15	19.48	-	-	-
TRIM74	0	genome.wustl.edu	37	7	72436307	72436307	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	7	72436307	72436307	C	T	SNP	TRIM74	ENST00000285805	human	ensembl	69_37n	-1	known	missense	c.382	p.V128I	1.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM74	HGNC	ENSG00000155428	10	0	0.00	19	8	29.63	-	-	-
TRMT5	0	genome.wustl.edu	37	14	61444282	61444282	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	14	61444282	61444282	G	A	SNP	TRMT5	ENST00000261249	human	ensembl	69_37n	-1	known	nonsense	c.742	p.R248*	1.000	pfam_tRNA_Trfase_Trm5/Tyw2	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT5	HGNC	ENSG00000126814	301	2	0.66	235	85	26.56	-	-	-
TRMT5	0	genome.wustl.edu	37	14	61444282	61444282	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	14	61444282	61444282	G	A	SNP	TRMT5	ENST00000261249	human	ensembl	69_37n	-1	known	nonsense	c.742	p.R248*	1.000	pfam_tRNA_Trfase_Trm5/Tyw2	pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TRMT5	HGNC	ENSG00000126814	355	0	0.00	235	85	26.56	-	-	-
UBE3D	0	genome.wustl.edu	37	6	83667047	83667047	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	6	83667047	83667047	C	T	SNP	UBE3D	ENST00000369747	human	ensembl	69_37n	-1	known	missense	c.1133	p.R378H	0.000	pfam_UBQ-conj_enz_E2-bd_prot	pfam_UBQ-conj_enz_E2-bd_prot	-	no_errors	UBE3D	HGNC	ENSG00000118420	120	0	0.00	128	36	21.95	-	-	-
UBE3D	0	genome.wustl.edu	37	6	83667047	83667047	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	6	83667047	83667047	C	T	SNP	UBE3D	ENST00000369747	human	ensembl	69_37n	-1	known	missense	c.1133	p.R378H	0.000	pfam_UBQ-conj_enz_E2-bd_prot	pfam_UBQ-conj_enz_E2-bd_prot	-	no_errors	UBE3D	HGNC	ENSG00000118420	206	1	0.48	128	36	21.95	-	-	-
ZNF41	0	genome.wustl.edu	37	X	47326822	47326822	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-10A-01D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	66529b84-d110-45b3-acb9-fe08f97a7cce	X	47326822	47326822	C	A	SNP	ZNF41	ENST00000397050	human	ensembl	69_37n	-1	known	missense	c.49	p.A17S	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF41	HGNC	ENSG00000147124	40	0	0.00	65	18	21.69	-	-	-
ZNF41	0	genome.wustl.edu	37	X	47326822	47326822	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A153-01A-12D-A12B-09	TCGA-E2-A153-11A-31D-A12B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5087c0d3-3b55-4713-a448-4869ffccdde5	527161e1-3015-4b27-9f4b-53d6d2a05079	X	47326822	47326822	C	A	SNP	ZNF41	ENST00000397050	human	ensembl	69_37n	-1	known	missense	c.49	p.A17S	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF41	HGNC	ENSG00000147124	83	0	0.00	65	18	21.69	-	-	-
