Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCA10	0	genome.wustl.edu	37	17	67212357	67212357	+	Splice_Site	SNP	C	C	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	17	67212357	67212357	C	A	SNP	ABCA10	ENST00000269081	human	ensembl	69_37n	-1	known	splice_site	c.672+1	e5+1	1.000	-	-	-	no_errors	ABCA10	HGNC	ENSG00000154263	31	0	0.00	38	8	17.39	-	-	-
ARID1A	0	genome.wustl.edu	37	1	27106363	27106363	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	1	27106363	27106363	T	C	SNP	ARID1A	ENST00000324856	human	ensembl	69_37n	+1	known	missense	c.5974	p.S1992P	1.000	pfam_DUF3518	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	60	0	0.00	30	33	51.56	-	-	-
BACH2	0	genome.wustl.edu	37	6	90660252	90660252	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	90660252	90660252	A	T	SNP	BACH2	ENST00000257749	human	ensembl	69_37n	-1	known	missense	c.1573	p.S525T	1.000	NULL	pfam_BTB_POZ,pfam_bZIP_1,pfam_bZIP_2,superfamily_BTB/POZ_fold,superfamily_Euk_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH2	HGNC	ENSG00000112182	35	0	0.00	22	15	40.54	-	-	-
BTBD16	0	genome.wustl.edu	37	10	124097568	124097569	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	10	124097568	124097569	-	T	INS	BTBD16	ENST00000368994	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1492_1493	p.S499fs	0.980:0.847	NULL	superfamily_BTB/POZ_fold	-	no_errors	BTBD16	HGNC	ENSG00000138152	138	0	0.00	71	27	27.55	-	-	-
CCBL2	0	genome.wustl.edu	37	1	89434456	89434456	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	1	89434456	89434456	T	C	SNP	CCBL2	ENST00000260508	human	ensembl	69_37n	-1	known	missense	c.200	p.N67S	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	CCBL2	HGNC	ENSG00000137944	40	0	0.00	25	12	32.43	-	-	-
CEACAM20	0	genome.wustl.edu	37	19	45024705	45024705	+	RNA	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	19	45024705	45024705	G	A	SNP	CEACAM20	ENST00000316962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CEACAM20	HGNC	ENSG00000176395	40	0	0.00	36	11	23.40	-	-	-
CENPK	0	genome.wustl.edu	37	5	64824380	64824380	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	5	64824380	64824380	T	A	SNP	CENPK	ENST00000242872	human	ensembl	69_37n	-1	known	missense	c.496	p.M166L	0.126	pfam_Centromere_CenpK	pfam_Centromere_CenpK,superfamily_Prefoldin	-	no_errors	CENPK	HGNC	ENSG00000123219	37	0	0.00	31	15	32.61	-	-	-
COL4A5	0	genome.wustl.edu	37	X	107834827	107834828	+	Frame_Shift_Ins	INS	-	-	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	X	107834827	107834828	-	A	INS	COL4A5	ENST00000328300	human	ensembl	69_37n	+1	known	frame_shift_ins	c.1376_1377	p.G460fs	0.981:0.853	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	47	0	0.00	26	19	42.22	-	-	-
DIAPH1	0	genome.wustl.edu	37	5	140960365	140960365	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	5	140960365	140960365	A	C	SNP	DIAPH1	ENST00000253811	human	ensembl	69_37n	-1	known	missense	c.770	p.I257S	1.000	pfam_Drf_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_actin-bd,pfam_Drf_FH3,pfam_Drf_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_FH2_actin-bd,superfamily_tRNA-bd_arm,smart_Actin-bd_FH2/DRF_autoreg	-	no_errors	DIAPH1	HGNC	ENSG00000131504	35	0	0.00	14	12	46.15	-	-	-
DNA2	0	genome.wustl.edu	37	10	70182350	70182350	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	10	70182350	70182350	A	C	SNP	DNA2	ENST00000399180	human	ensembl	69_37n	-1	known	missense	c.2672	p.M891R	1.000	NULL	pfam_DNA_replication_fac_Dna2	-	no_errors	DNA2	HGNC	ENSG00000138346	63	0	0.00	45	26	36.62	-	-	-
DNAH9	0	genome.wustl.edu	37	17	11572851	11572851	+	Silent	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	17	11572851	11572851	C	T	SNP	DNAH9	ENST00000262442	human	ensembl	69_37n	+1	known	silent	c.3093	p.Y1031	0.854	NULL	pfam_Dynein_heavy,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	52	0	0.00	8	15	65.22	-	-	-
DYM	0	genome.wustl.edu	37	18	46808427	46808427	+	Silent	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	18	46808427	46808427	C	T	SNP	DYM	ENST00000269445	human	ensembl	69_37n	-1	known	silent	c.1065	p.L355	0.996	pfam_Dymeclin,superfamily_ARM-type_fold	pfam_Dymeclin,superfamily_ARM-type_fold	-	no_errors	DYM	HGNC	ENSG00000141627	60	0	0.00	42	28	40.00	-	-	-
EBF3	0	genome.wustl.edu	37	10	131640515	131640515	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	10	131640515	131640515	A	T	SNP	EBF3	ENST00000355311	human	ensembl	69_37n	-1	known	missense	c.1237	p.Y413N	1.000	NULL	pfam_IPT_TIG_rcpt,superfamily_Ig_E-set,smart_IPT_TIG_rcpt	-	no_errors	EBF3	HGNC	ENSG00000108001	26	0	0.00	17	7	29.17	-	-	-
EML6	0	genome.wustl.edu	37	2	55144045	55144045	+	Silent	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	2	55144045	55144045	C	T	SNP	EML6	ENST00000356458	human	ensembl	69_37n	+1	novel	silent	c.3648	p.F1216	0.996	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML6	HGNC	ENSG00000214595	53	0	0.00	33	16	32.65	-	-	-
FRK	0	genome.wustl.edu	37	6	116381284	116381284	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	116381284	116381284	C	G	SNP	FRK	ENST00000368626	human	ensembl	69_37n	-1	known	missense	c.191	p.R64P	0.001	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,prints_SH3_domain,pfscan_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom	-	no_errors	FRK	HGNC	ENSG00000111816	39	0	0.00	25	18	41.86	-	-	-
GOLGA6L6	0	genome.wustl.edu	37	15	20739675	20739675	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	15	20739675	20739675	C	T	SNP	GOLGA6L6	ENST00000427390	human	ensembl	69_37n	-1	known	missense	c.2075	p.R692Q	0.716	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405	41	0	0.00	25	4	13.79	-	-	-
GOLGA6L6	0	genome.wustl.edu	37	15	20740459	20740461	+	In_Frame_Del	DEL	TCG	TCG	-			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	TCG	TCG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	15	20740459	20740461	TCG	-	DEL	GOLGA6L6	ENST00000427390	human	ensembl	69_37n	-1	known	in_frame_del	c.1291_1289	p.AK430in_frame_delE	0.966:0.963:0.960	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405	9	0	0.00	9	4	30.77	-	-	-
GPR110	0	genome.wustl.edu	37	6	46975029	46975029	+	Silent	SNP	T	T	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	46975029	46975029	T	C	SNP	GPR110	ENST00000371253	human	ensembl	69_37n	-1	known	silent	c.2493	p.G831	0.002	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_SEA,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_Ig-hepta_rcpt	-	no_errors	GPR110	HGNC	ENSG00000153292	38	0	0.00	23	11	31.43	-	-	-
GPR111	0	genome.wustl.edu	37	6	47646834	47646834	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	47646834	47646834	C	G	SNP	GPR111	ENST00000296862	human	ensembl	69_37n	+1	known	missense	c.435	p.D145E	0.740	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR111	HGNC	ENSG00000164393	67	0	0.00	45	24	34.78	-	-	-
GREB1L	0	genome.wustl.edu	37	18	19031101	19031101	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	18	19031101	19031101	C	T	SNP	GREB1L	ENST00000424526	human	ensembl	69_37n	+1	known	missense	c.1838	p.T613I	1.000	NULL	NULL	-	no_errors	GREB1L	HGNC	ENSG00000141449	39	0	0.00	22	7	24.14	-	-	-
GRIN3A	0	genome.wustl.edu	37	9	104433299	104433299	+	Silent	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	9	104433299	104433299	G	A	SNP	GRIN3A	ENST00000361820	human	ensembl	69_37n	-1	known	silent	c.1395	p.I465	1.000	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	41	0	0.00	39	16	29.09	-	-	-
HERC6	0	genome.wustl.edu	37	4	89363548	89363548	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	4	89363548	89363548	A	G	SNP	HERC6	ENST00000264346	human	ensembl	69_37n	+1	known	missense	c.3005	p.E1002G	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Reg_chr_condens,superfamily_HECT,superfamily_Reg_csome_cond/b-lactamase_inh,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC6	HGNC	ENSG00000138642	38	0	0.00	29	21	42.00	-	-	-
HIVEP1	0	genome.wustl.edu	37	6	12131113	12131113	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	12131113	12131113	G	A	SNP	HIVEP1	ENST00000379388	human	ensembl	69_37n	+1	known	missense	c.6323	p.R2108Q	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951	83	0	0.00	74	19	20.43	-	-	-
HOOK3	0	genome.wustl.edu	37	8	42798513	42798513	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	8	42798513	42798513	C	A	SNP	HOOK3	ENST00000307602	human	ensembl	69_37n	+1	known	missense	c.325	p.H109N	1.000	pfam_HOOK	pfam_HOOK,superfamily_t-SNARE	-	no_errors	HOOK3	HGNC	ENSG00000168172	69	0	0.00	92	24	20.69	-	-	-
HSPA8	0	genome.wustl.edu	37	11	122930239	122930241	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	11	122930239	122930241	GAA	-	DEL	HSPA8	ENST00000534624	human	ensembl	69_37n	-1	known	in_frame_del	c.1062_1060	p.F354in_frame_del	1.000:1.000:1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA8	HGNC	ENSG00000109971	29	0	0.00	12	10	45.45	-	-	-
ITPR1	0	genome.wustl.edu	37	3	4730264	4730264	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	3	4730264	4730264	C	A	SNP	ITPR1	ENST00000302640	human	ensembl	69_37n	+1	known	missense	c.3743	p.A1248D	0.992	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995	44	0	0.00	37	29	43.94	-	-	-
LRRTM3	0	genome.wustl.edu	37	10	68686978	68686978	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	10	68686978	68686978	G	A	SNP	LRRTM3	ENST00000361320	human	ensembl	69_37n	+1	known	missense	c.304	p.E102K	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM3	HGNC	ENSG00000198739	28	0	0.00	24	8	25.00	-	-	-
MAP2K4	0	genome.wustl.edu	37	17	12032459	12032459	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	17	12032459	12032459	G	T	SNP	MAP2K4	ENST00000415385	human	ensembl	69_37n	+1	known	nonsense	c.928	p.E310*	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559	38	0	0.00	9	10	52.63	-	-	-
MIER1	0	genome.wustl.edu	37	1	67424667	67424668	+	Splice_Site	INS	-	-	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	1	67424667	67424668	-	T	INS	MIER1	ENST00000401041	human	ensembl	69_37n	+1	known	splice_site_ins	c.634+1_634+1	e6+1	1.000:1.000	-	-	-	no_errors	MIER1	HGNC	ENSG00000198160	56	0	0.00	36	13	26.53	-	-	-
MORN1	0	genome.wustl.edu	37	1	2304001	2304001	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	1	2304001	2304001	G	C	SNP	MORN1	ENST00000378531	human	ensembl	69_37n	-1	known	missense	c.664	p.P222A	0.839	NULL	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151	30	0	0.00	20	8	28.57	-	-	-
MUC20	0	genome.wustl.edu	37	3	195452668	195452668	+	Silent	SNP	C	C	G			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	3	195452668	195452668	C	G	SNP	MUC20	ENST00000447234	human	ensembl	69_37n	+1	known	silent	c.1194	p.P398	0.004	NULL	NULL	-	no_errors	MUC20	HGNC	ENSG00000176945	28	0	0.00	20	6	23.08	-	-	-
NOS2	0	genome.wustl.edu	37	17	26116644	26116644	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	17	26116644	26116644	C	T	SNP	NOS2	ENST00000313735	human	ensembl	69_37n	-1	known	missense	c.181	p.V61M	0.000	pirsf_NOS_met	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_met,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171	44	0	0.00	52	40	43.48	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228480325	228480325	+	Missense_Mutation	SNP	T	T	C			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	1	228480325	228480325	T	C	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	missense	c.10705	p.W3569R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	52	0	0.00	53	12	18.46	-	-	-
PGAP1	0	genome.wustl.edu	37	2	197707454	197707454	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	2	197707454	197707454	A	G	SNP	PGAP1	ENST00000354764	human	ensembl	69_37n	-1	known	missense	c.2621	p.I874T	0.993	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121	60	0	0.00	18	21	53.85	-	-	-
PREX2	0	genome.wustl.edu	37	8	68965476	68965476	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	8	68965476	68965476	G	A	SNP	PREX2	ENST00000288368	human	ensembl	69_37n	+1	known	missense	c.1088	p.R363Q	1.000	smart_Pleckstrin_homology	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	44	0	0.00	40	10	19.61	-	-	-
SDK1	0	genome.wustl.edu	37	7	4249712	4249712	+	Silent	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	7	4249712	4249712	C	T	SNP	SDK1	ENST00000404826	human	ensembl	69_37n	+1	known	silent	c.5457	p.N1819	0.868	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	SDK1	HGNC	ENSG00000146555	25	0	0.00	13	10	43.48	-	-	-
SLC16A14	0	genome.wustl.edu	37	2	230910775	230910775	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	2	230910775	230910775	G	A	SNP	SLC16A14	ENST00000295190	human	ensembl	69_37n	-1	known	missense	c.1067	p.T356M	0.995	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053	29	0	0.00	22	13	37.14	-	-	-
SPPL2C	0	genome.wustl.edu	37	17	43924233	43924233	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	17	43924233	43924233	C	T	SNP	SPPL2C	ENST00000329196	human	ensembl	69_37n	+1	known	missense	c.1961	p.A654V	0.967	NULL	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Peptidase_A22	-	no_errors	SPPL2C	HGNC	ENSG00000185294	16	0	0.00	16	9	36.00	-	-	-
SPTB	0	genome.wustl.edu	37	14	65220359	65220359	+	Silent	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	14	65220359	65220359	G	A	SNP	SPTB	ENST00000389722	human	ensembl	69_37n	-1	known	silent	c.6498	p.P2166	0.000	pirsf_Spectrin_bsu,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	16	0	0.00	13	8	38.10	-	-	-
SYNE1	0	genome.wustl.edu	37	6	152861113	152861113	+	Silent	SNP	G	G	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	6	152861113	152861113	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	69_37n	-1	known	silent	c.111	p.I37	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC_transptrTM_dom_typ1,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	125	0	0.00	76	46	37.70	-	-	-
THPO	0	genome.wustl.edu	37	3	184091243	184091243	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	3	184091243	184091243	C	-	DEL	THPO	ENST00000204615	human	ensembl	69_37n	-1	known	frame_shift_del	c.356	p.R119fs	1.000	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,prints_Thrombopoeitin	pfam_EPO_TPO,superfamily_4_helix_cytokine-like_core,prints_Thrombopoeitin	-	no_errors	THPO	HGNC	ENSG00000090534	33	0	0.00	24	19	41.30	-	-	-
UMPS	0	genome.wustl.edu	37	3	124457125	124457125	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A1IG-01A-11D-A142-09	TCGA-E2-A1IG-10A-01D-A142-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	84da47a3-49e1-4f94-bea9-dd20b6627adb	9859da9f-72c1-4f68-a054-4d103170d785	3	124457125	124457125	C	A	SNP	UMPS	ENST00000479719	human	ensembl	69_37n	+1	known	missense	c.1021	p.P341T	0.008	NULL	pfam_OMPdeCOase_dom,pfam_PRibTrfase,superfamily_RibuloseP-bd_barrel,tigrfam_Or_phspho_trans_clade-1	-	no_errors	UMPS	HGNC	ENSG00000114491	19	0	0.00	9	8	47.06	-	-	-
