Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCC9	0	genome.wustl.edu	37	12	21962817	21962817	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	21962817	21962817	C	T	SNP	ABCC9	ENST00000261200	human	ensembl	69_37n	-1	known	silent	c.4284	p.K1428	1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCC9	HGNC	ENSG00000069431	58	0	0.00	18	10	35.71	-	-	-
ADAM6	0	genome.wustl.edu	37	14	106437799	106437799	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	14	106437799	106437799	G	A	SNP	ADAM6	ENST00000452053	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.923	-	-	-	no_errors	ADAM6	HGNC	ENSG00000233988	34	0	0.00	20	14	41.18	-	-	-
ADAMTS17	0	genome.wustl.edu	37	15	100672300	100672300	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	100672300	100672300	C	T	SNP	ADAMTS17	ENST00000268070	human	ensembl	69_37n	-1	known	missense	c.1633	p.D545N	1.000	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS17	HGNC	ENSG00000140470	39	0	0.00	19	15	44.12	-	-	-
AP4E1	0	genome.wustl.edu	37	15	51289803	51289803	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	51289803	51289803	C	T	SNP	AP4E1	ENST00000261842	human	ensembl	69_37n	+1	known	missense	c.2627	p.S876L	0.382	pfam_Coatomer_bsu_C,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014	46	0	0.00	29	9	23.68	-	-	-
APC2	0	genome.wustl.edu	37	19	1468432	1468432	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	1468432	1468432	C	A	SNP	APC2	ENST00000233607	human	ensembl	69_37n	+1	known	nonsense	c.5132	p.S1711*	0.998	NULL	pfam_APC_basic_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266	10	0	0.00	2	6	75.00	-	-	-
ARID4A	0	genome.wustl.edu	37	14	58785449	58785449	+	Missense_Mutation	SNP	A	A	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	14	58785449	58785449	A	T	SNP	ARID4A	ENST00000355431	human	ensembl	69_37n	+1	known	missense	c.375	p.L125F	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,smart_Chromo_domain/shadow,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4A	HGNC	ENSG00000032219	48	0	0.00	23	23	50.00	-	-	-
ASCC2	0	genome.wustl.edu	37	22	30198146	30198146	+	Missense_Mutation	SNP	C	C	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	22	30198146	30198146	C	A	SNP	ASCC2	ENST00000307790	human	ensembl	69_37n	-1	known	missense	c.1405	p.D469Y	1.000	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325	49	0	0.00	10	16	61.54	-	-	-
ASCC3	0	genome.wustl.edu	37	6	100988257	100988257	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	100988257	100988257	C	T	SNP	ASCC3	ENST00000369162	human	ensembl	69_37n	-1	known	missense	c.5557	p.E1853K	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	24	0	0.00	19	8	29.63	-	-	-
ASIC2	0	genome.wustl.edu	37	17	31415884	31415884	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	31415884	31415884	C	T	SNP	ASIC2	ENST00000225823	human	ensembl	69_37n	-1	known	silent	c.984	p.Q328	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC2	HGNC	ENSG00000108684	40	0	0.00	18	8	30.77	-	-	-
ASPSCR1	0	genome.wustl.edu	37	17	79973183	79973183	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	79973183	79973183	G	A	SNP	ASPSCR1	ENST00000306729	human	ensembl	69_37n	+1	known	missense	c.1586	p.G529D	0.001	NULL	pfam_TUG,pfam_UBX,pfscan_UBX	-	no_errors	ASPSCR1	HGNC	ENSG00000169696	38	0	0.00	17	9	34.62	-	-	-
BAI2	0	genome.wustl.edu	37	1	32196739	32196739	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	32196739	32196739	C	T	SNP	BAI2	ENST00000373658	human	ensembl	69_37n	-1	known	missense	c.4042	p.E1348K	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	48	0	0.00	23	16	41.03	-	-	-
BIK	0	genome.wustl.edu	37	22	43524602	43524602	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	22	43524602	43524602	T	-	DEL	BIK	ENST00000216115	human	ensembl	69_37n	+1	known	frame_shift_del	c.361	p.F121fs	0.000	pfam_Bcl2-int_killer	pfam_Bcl2-int_killer	-	no_errors	BIK	HGNC	ENSG00000100290	41	0	0.00	15	16	51.61	-	-	-
BTBD3	0	genome.wustl.edu	37	20	11903405	11903405	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	11903405	11903405	G	A	SNP	BTBD3	ENST00000378226	human	ensembl	69_37n	+1	known	silent	c.660	p.L220	1.000	superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD3	HGNC	ENSG00000132640	47	0	0.00	20	17	45.95	-	-	-
BTN3A1	0	genome.wustl.edu	37	6	26406396	26406396	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	26406396	26406396	C	T	SNP	BTN3A1	ENST00000289361	human	ensembl	69_37n	+1	known	silent	c.345	p.N115	0.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like,prints_Butyrophylin	-	no_errors	BTN3A1	HGNC	ENSG00000026950	19	0	0.00	10	6	37.50	-	-	-
C15orf52	0	genome.wustl.edu	37	15	40632136	40632136	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	40632136	40632136	C	G	SNP	C15orf52	ENST00000559313	human	ensembl	69_37n	-1	known	missense	c.225	p.K75N	1.000	NULL	NULL	-	no_errors	C15orf52	HGNC	ENSG00000188549	30	0	0.00	13	7	35.00	-	-	-
CARD16	0	genome.wustl.edu	37	11	104915369	104915369	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	104915369	104915369	C	G	SNP	CARD16	ENST00000375706	human	ensembl	69_37n	-1	known	missense	c.24	p.E8D	0.003	pfam_CARD,superfamily_DEATH-like,smart_CARD,pfscan_CARD	pfam_CARD,superfamily_DEATH-like,smart_CARD,pfscan_CARD	-	no_errors	CARD16	HGNC	ENSG00000204397	56	0	0.00	6	11	64.71	-	-	-
CDC42SE1	0	genome.wustl.edu	37	1	151027748	151027748	+	RNA	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	151027748	151027748	C	T	SNP	CDC42SE1	ENST00000483763	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDC42SE1	HGNC	ENSG00000197622	18	0	0.00	18	13	41.94	-	-	-
CDH1	0	genome.wustl.edu	37	16	68842676	68842677	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	68842676	68842677	-	T	INS	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	frame_shift_ins	c.612_613	p.I205fs	0.552:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH1	HGNC	ENSG00000039068	16	0	0.00	2	10	83.33	-	-	-
CHERP	0	genome.wustl.edu	37	19	16631645	16631645	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	16631645	16631645	C	G	SNP	CHERP	ENST00000546361	human	ensembl	69_37n	-1	known	missense	c.2193	p.K731N	1.000	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872	51	0	0.00	31	18	36.73	-	-	-
CLDN19	0	genome.wustl.edu	37	1	43203908	43203908	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	43203908	43203908	G	C	SNP	CLDN19	ENST00000296387	human	ensembl	69_37n	-1	known	silent	c.465	p.V155	0.999	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	-	no_errors	CLDN19	HGNC	ENSG00000164007	27	0	0.00	18	9	33.33	-	-	-
CNOT2	0	genome.wustl.edu	37	12	70729251	70729251	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	70729251	70729251	C	T	SNP	CNOT2	ENST00000229195	human	ensembl	69_37n	+1	known	missense	c.683	p.S228L	1.000	NULL	pfam_NOT	-	no_errors	CNOT2	HGNC	ENSG00000111596	57	0	0.00	19	25	56.82	-	-	-
COL4A3BP	0	genome.wustl.edu	37	5	74801856	74801857	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	74801856	74801857	-	T	INS	COL4A3BP	ENST00000380494	human	ensembl	69_37n	-1	known	frame_shift_ins	c.566_565	p.T189fs	1.000:1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_START_lipid-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_START_lipid-bd,pfscan_Pleckstrin_homology,pfscan_START_lipid-bd	-	no_errors	COL4A3BP	HGNC	ENSG00000113163	26	0	0.00	18	13	41.94	-	-	-
COL4A6	0	genome.wustl.edu	37	X	107403829	107403829	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	107403829	107403829	C	T	SNP	COL4A6	ENST00000372216	human	ensembl	69_37n	-1	known	missense	c.4392	p.M1464I	0.019	superfamily_C-type_lectin_fold	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC	ENSG00000197565	30	0	0.00	14	7	33.33	-	-	-
COX7B2	0	genome.wustl.edu	37	4	46737164	46737164	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	4	46737164	46737164	G	A	SNP	COX7B2	ENST00000302930	human	ensembl	69_37n	-1	known	nonsense	c.46	p.Q16*	0.002	pfam_Cyt_c_oxidase_suVIIB	pfam_Cyt_c_oxidase_suVIIB,superfamily_Cyt_c_oxidase_suVIIB_dom	-	no_errors	COX7B2	HGNC	ENSG00000170516	52	0	0.00	18	16	47.06	-	-	-
CRNN	0	genome.wustl.edu	37	1	152383157	152383157	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	152383157	152383157	C	T	SNP	CRNN	ENST00000271835	human	ensembl	69_37n	-1	known	missense	c.401	p.G134E	0.000	NULL	pfam_S100_Ca-bd_sub,smart_EF_hand_Ca-bd,pfscan_EF_HAND_2	-	no_errors	CRNN	HGNC	ENSG00000143536	44	0	0.00	33	8	19.51	-	-	-
CRYGD	0	genome.wustl.edu	37	2	208986425	208986425	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	208986425	208986425	G	A	SNP	CRYGD	ENST00000264376	human	ensembl	69_37n	-1	known	missense	c.497	p.S166F	0.994	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,prints_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	-	no_errors	CRYGD	HGNC	ENSG00000118231	14	0	0.00	11	4	26.67	-	-	-
CSMD3	0	genome.wustl.edu	37	8	113516056	113516056	+	Silent	SNP	T	T	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	113516056	113516056	T	A	SNP	CSMD3	ENST00000297405	human	ensembl	69_37n	-1	known	silent	c.5046	p.G1682	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	46	0	0.00	10	9	47.37	-	-	-
CSMD3	0	genome.wustl.edu	37	8	113585757	113585757	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	113585757	113585757	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	69_37n	-1	known	missense	c.4015	p.D1339N	1.000	pfam_CUB,superfamily_CUB,smart_CUB,pfscan_CUB	pfam_CUB,pfam_Sushi_SCR_CCP,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_Sushi_SCR_CCP,pfscan_CUB,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	19	0	0.00	11	5	31.25	-	-	-
CUL4A	0	genome.wustl.edu	37	13	113899465	113899465	+	Splice_Site	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	13	113899465	113899465	G	A	SNP	CUL4A	ENST00000375440	human	ensembl	69_37n	+1	known	splice_site	c.1445-1	e14-1	1.000	-	-	-	no_errors	CUL4A	HGNC	ENSG00000139842	42	0	0.00	20	13	39.39	-	-	-
DARS	0	genome.wustl.edu	37	2	136680409	136680409	+	Silent	SNP	T	T	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	136680409	136680409	T	C	SNP	DARS	ENST00000264161	human	ensembl	69_37n	-1	known	silent	c.756	p.L252	0.991	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asp-tRNA-synth_arc/euk	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA-helicase,superfamily_NA-bd_OB-fold-like,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Asp-tRNA-synth_arc/euk	-	no_errors	DARS	HGNC	ENSG00000115866	54	0	0.00	28	11	28.21	-	-	-
DCDC1	0	genome.wustl.edu	37	11	31312200	31312200	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	31312200	31312200	C	G	SNP	DCDC1	ENST00000452803	human	ensembl	69_37n	-1	known	missense	c.954	p.M318I	0.976	superfamily_Doublecortin_dom	superfamily_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	DCDC1	HGNC	ENSG00000188682	51	0	0.00	17	6	26.09	-	-	-
DDX5	0	genome.wustl.edu	37	17	62503388	62503388	+	RNA	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	62503388	62503388	C	G	SNP	DDX5	ENST00000583699	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DDX5	HGNC	ENSG00000108654	52	0	0.00	18	19	51.35	-	-	-
DENND2C	0	genome.wustl.edu	37	1	115168209	115168209	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	115168209	115168209	C	G	SNP	DENND2C	ENST00000393274	human	ensembl	69_37n	-1	known	missense	c.397	p.D133H	0.644	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2C	HGNC	ENSG00000175984	54	0	0.00	31	16	34.04	-	-	-
DGKH	0	genome.wustl.edu	37	13	42752318	42752318	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	13	42752318	42752318	C	T	SNP	DGKH	ENST00000337343	human	ensembl	69_37n	+1	known	silent	c.1500	p.L500	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780	40	0	0.00	15	7	31.82	-	-	-
DNAJA3	0	genome.wustl.edu	37	16	4504878	4504878	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	4504878	4504878	G	A	SNP	DNAJA3	ENST00000262375	human	ensembl	69_37n	+1	known	missense	c.1406	p.G469E	1.000	NULL	pfam_DnaJ_N,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_N,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_N,pfscan_DnaJ_N,pfscan_HSP_DnaJ_Cys-rich_dom,prints_Hsp_DnaJ	-	no_errors	DNAJA3	HGNC	ENSG00000103423	26	0	0.00	17	12	41.38	-	-	-
DZIP1L	0	genome.wustl.edu	37	3	137800589	137800589	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	137800589	137800589	G	C	SNP	DZIP1L	ENST00000327532	human	ensembl	69_37n	-1	known	silent	c.1221	p.L407	0.159	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163	35	0	0.00	8	10	55.56	-	-	-
EIF3D	0	genome.wustl.edu	37	22	36912354	36912354	+	RNA	SNP	C	C	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	22	36912354	36912354	C	A	SNP	EIF3D	ENST00000462794	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EIF3D	HGNC	ENSG00000100353	14	0	0.00	9	10	52.63	-	-	-
EP400	0	genome.wustl.edu	37	12	132504703	132504703	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	132504703	132504703	C	T	SNP	EP400	ENST00000333577	human	ensembl	69_37n	+1	known	nonsense	c.4495	p.Q1499*	0.917	NULL	pfam_SNF2_N,pfam_HSA,pfam_Helicase_C,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	19	0	0.00	13	11	45.83	-	-	-
EXOC1	0	genome.wustl.edu	37	4	56765964	56765964	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	4	56765964	56765964	G	A	SNP	EXOC1	ENST00000346134	human	ensembl	69_37n	+1	known	missense	c.2251	p.E751K	1.000	pfam_Exocyst_Exoc1	pfam_Exocyst_Exoc1	-	no_errors	EXOC1	HGNC	ENSG00000090989	19	0	0.00	16	15	48.39	-	-	-
F13A1	0	genome.wustl.edu	37	6	6152107	6152107	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	6152107	6152107	G	A	SNP	F13A1	ENST00000264870	human	ensembl	69_37n	-1	known	nonsense	c.1984	p.R662*	0.000	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	F13A1	HGNC	ENSG00000124491	15	0	0.00	7	9	56.25	-	-	-
F8	0	genome.wustl.edu	37	X	154158487	154158487	+	Missense_Mutation	SNP	A	A	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	154158487	154158487	A	C	SNP	F8	ENST00000360256	human	ensembl	69_37n	-1	known	missense	c.3578	p.L1193R	0.000	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	51	0	0.00	16	14	46.67	-	-	-
FAM115A	0	genome.wustl.edu	37	7	143573620	143573620	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	143573620	143573620	C	T	SNP	FAM115A	ENST00000479870	human	ensembl	69_37n	-1	known	missense	c.82	p.E28K	1.000	NULL	NULL	-	no_errors	FAM115A	HGNC	ENSG00000198420	34	0	0.00	17	10	37.04	-	-	-
FAM153B	0	genome.wustl.edu	37	5	175536140	175536140	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	175536140	175536140	C	T	SNP	FAM153B	ENST00000253490	human	ensembl	69_37n	+1	known	nonsense	c.964	p.Q322*	0.000	prints_FAM153	prints_FAM153	-	no_errors	FAM153B	HGNC	ENSG00000182230	16	0	0.00	15	9	37.50	-	-	-
FAM210B	0	genome.wustl.edu	37	20	54941259	54941259	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	54941259	54941259	C	T	SNP	FAM210B	ENST00000371384	human	ensembl	69_37n	+1	known	silent	c.495	p.I165	1.000	pfam_DUF1279	pfam_DUF1279	-	no_errors	FAM210B	HGNC	ENSG00000124098	34	0	0.00	21	10	32.26	-	-	-
FCHSD1	0	genome.wustl.edu	37	5	141019951	141019951	+	RNA	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	141019951	141019951	C	T	SNP	FCHSD1	ENST00000523856	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FCHSD1	HGNC	ENSG00000197948	26	0	0.00	13	10	43.48	-	-	-
FGF8	0	genome.wustl.edu	37	10	103534571	103534571	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	10	103534571	103534571	G	C	SNP	FGF8	ENST00000320185	human	ensembl	69_37n	-1	known	silent	c.255	p.L85	0.998	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF	pfam_IL1_HBGF,superfamily_Cytokine_IL1-like,smart_IL1_HBGF,prints_IL1_HBGF	-	no_errors	FGF8	HGNC	ENSG00000107831	40	0	0.00	23	15	39.47	-	-	-
FLG	0	genome.wustl.edu	37	1	152282080	152282080	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	152282080	152282080	C	T	SNP	FLG	ENST00000368799	human	ensembl	69_37n	-1	known	missense	c.5282	p.R1761H	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	118	1	0.84	145	49	25.26	-	-	-
FNDC5	0	genome.wustl.edu	37	1	33328660	33328660	+	RNA	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	33328660	33328660	C	T	SNP	FNDC5	ENST00000481487	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FNDC5	HGNC	ENSG00000160097	14	0	0.00	9	7	43.75	-	-	-
FSIP2	0	genome.wustl.edu	37	2	186653387	186653387	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	186653387	186653387	G	A	SNP	FSIP2	ENST00000343098	human	ensembl	69_37n	+1	known	silent	c.1791	p.L597	0.773	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	35	0	0.00	5	11	68.75	-	-	-
GAL3ST3	0	genome.wustl.edu	37	11	65810977	65810977	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	65810977	65810977	C	T	SNP	GAL3ST3	ENST00000312006	human	ensembl	69_37n	-1	known	silent	c.297	p.P99	0.840	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229	46	0	0.00	11	22	66.67	-	-	-
GDPD4	0	genome.wustl.edu	37	11	76928297	76928297	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	76928297	76928297	C	T	SNP	GDPD4	ENST00000376217	human	ensembl	69_37n	-1	known	missense	c.1557	p.M519I	0.000	NULL	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD4	HGNC	ENSG00000178795	51	0	0.00	57	26	31.33	-	-	-
GPAM	0	genome.wustl.edu	37	10	113915732	113915732	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	10	113915732	113915732	G	C	SNP	GPAM	ENST00000348367	human	ensembl	69_37n	-1	known	missense	c.2201	p.S734C	0.998	NULL	pfam_Acyltransferase,smart_Acyltransferase	-	no_errors	GPAM	HGNC	ENSG00000119927	71	0	0.00	19	22	53.66	-	-	-
GPR34	0	genome.wustl.edu	37	X	41555198	41555198	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	41555198	41555198	C	G	SNP	GPR34	ENST00000378138	human	ensembl	69_37n	+1	known	missense	c.312	p.I104M	0.994	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	GPR34	HGNC	ENSG00000171659	32	0	0.00	20	17	45.95	-	-	-
GPR34	0	genome.wustl.edu	37	X	41555705	41555705	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	41555705	41555705	C	T	SNP	GPR34	ENST00000378138	human	ensembl	69_37n	+1	known	silent	c.819	p.I273	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_P2_purnocptor	-	no_errors	GPR34	HGNC	ENSG00000171659	38	0	0.00	18	7	28.00	-	-	-
HLA-DQB2	0	genome.wustl.edu	37	6	32725653	32725653	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	32725653	32725653	C	T	SNP	HLA-DQB2	ENST00000435145	human	ensembl	69_37n	-1	known	silent	c.654	p.Q218	0.998	NULL	pfam_MHC_II_b_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like	-	no_errors	HLA-DQB2	HGNC	ENSG00000232629	36	0	0.00	35	5	12.50	-	-	-
HPS3	0	genome.wustl.edu	37	3	148871409	148871409	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	148871409	148871409	G	A	SNP	HPS3	ENST00000296051	human	ensembl	69_37n	+1	known	silent	c.1374	p.E458	0.990	pirsf_BLOC-2_complex_Hps3_subunit	pirsf_BLOC-2_complex_Hps3_subunit	-	no_errors	HPS3	HGNC	ENSG00000163755	38	0	0.00	19	17	47.22	-	-	-
HRNR	0	genome.wustl.edu	37	1	152189237	152189237	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	152189237	152189237	C	G	SNP	HRNR	ENST00000368801	human	ensembl	69_37n	-1	known	missense	c.4868	p.S1623T	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_HAND_2	-	no_errors	HRNR	HGNC	ENSG00000197915	8	0	0.00	5	5	50.00	-	-	-
HTR5A	0	genome.wustl.edu	37	7	154863224	154863224	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	154863224	154863224	C	T	SNP	HTR5A	ENST00000287907	human	ensembl	69_37n	+1	known	silent	c.615	p.T205	0.931	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_5HT5A_rcpt,prints_5HT_rcpt	-	no_errors	HTR5A	HGNC	ENSG00000157219	33	0	0.00	20	9	31.03	-	-	-
IFIT3	0	genome.wustl.edu	37	10	91098974	91098974	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	10	91098974	91098974	G	C	SNP	IFIT3	ENST00000371811	human	ensembl	69_37n	+1	known	missense	c.562	p.E188Q	0.000	pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT3	HGNC	ENSG00000119917	16	0	0.00	12	6	33.33	-	-	-
IGFBP1	0	genome.wustl.edu	37	7	45928353	45928353	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	45928353	45928353	C	T	SNP	IGFBP1	ENST00000275525	human	ensembl	69_37n	+1	known	silent	c.102	p.S34	0.000	pfam_IGFBP-like,smart_IGFBP-like	pfam_Thyroglobulin_1,pfam_IGFBP-like,superfamily_Thyroglobulin_1,superfamily_Growth_fac_rcpt,smart_IGFBP-like,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1,prints_IGFBP_1-6_chordata,prints_IGFBP1	-	no_errors	IGFBP1	HGNC	ENSG00000146678	26	0	0.00	9	7	43.75	-	-	-
IGHV4-28	0	genome.wustl.edu	37	14	106780570	106780570	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	14	106780570	106780570	G	A	SNP	IGHV4-28	ENST00000390612	human	ensembl	69_37n	-1	known	silent	c.294	p.F98	0.000	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV4-28	HGNC	ENSG00000211952	134	0	0.00	77	45	36.89	-	-	-
ITGAM	0	genome.wustl.edu	37	16	31336677	31336679	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	31336677	31336679	CTT	-	DEL	ITGAM	ENST00000544665	human	ensembl	69_37n	+1	known	in_frame_del	c.2460_2462	p.F823in_frame_del	0.333:0.341:0.383	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896	47	0	0.00	24	31	56.36	-	-	-
JRK	0	genome.wustl.edu	37	8	143762039	143762039	+	RNA	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	143762039	143762039	G	C	SNP	JRK	ENST00000585503	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	JRK	HGNC	ENSG00000234616	42	0	0.00	13	15	53.57	-	-	-
KANK1	0	genome.wustl.edu	37	9	711674	711674	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	9	711674	711674	C	T	SNP	KANK1	ENST00000382297	human	ensembl	69_37n	+1	known	missense	c.908	p.S303L	1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	34	0	0.00	15	8	34.78	-	-	-
KCNF1	0	genome.wustl.edu	37	2	11052864	11052864	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	11052864	11052864	C	T	SNP	KCNF1	ENST00000295082	human	ensembl	69_37n	+1	known	silent	c.312	p.I104	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv6	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Ion_trans_2,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNF1	HGNC	ENSG00000162975	47	0	0.00	27	9	25.00	-	-	-
KCNH8	0	genome.wustl.edu	37	3	19432101	19432101	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	19432101	19432101	G	A	SNP	KCNH8	ENST00000328405	human	ensembl	69_37n	+1	known	missense	c.940	p.D314N	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_Ion_trans_2,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960	32	0	0.00	6	8	57.14	-	-	-
KDM2A	0	genome.wustl.edu	37	11	66985342	66985342	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	66985342	66985342	C	T	SNP	KDM2A	ENST00000529006	human	ensembl	69_37n	+1	known	silent	c.828	p.F276	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_Znf_CXXC,pfam_F-box_dom_cyclin-like,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2A	HGNC	ENSG00000173120	44	0	0.00	57	12	17.39	-	-	-
KIAA0100	0	genome.wustl.edu	37	17	26962559	26962559	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	26962559	26962559	G	C	SNP	KIAA0100	ENST00000005905	human	ensembl	69_37n	-1	known	silent	c.2046	p.V682	0.064	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202	63	0	0.00	23	11	32.35	-	-	-
KIAA0195	0	genome.wustl.edu	37	17	73489891	73489891	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	73489891	73489891	C	T	SNP	KIAA0195	ENST00000314256	human	ensembl	69_37n	+1	known	silent	c.2301	p.I767	0.044	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	30	0	0.00	9	9	50.00	-	-	-
KIAA1919	0	genome.wustl.edu	37	6	111583513	111583513	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	111583513	111583513	G	A	SNP	KIAA1919	ENST00000368847	human	ensembl	69_37n	+1	known	silent	c.81	p.V27	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	69	0	0.00	34	27	44.26	-	-	-
KIF24	0	genome.wustl.edu	37	9	34256034	34256034	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	9	34256034	34256034	G	A	SNP	KIF24	ENST00000379166	human	ensembl	69_37n	-1	known	missense	c.3571	p.P1191S	0.139	NULL	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638	37	0	0.00	18	13	41.94	-	-	-
KPNA1	0	genome.wustl.edu	37	3	122146503	122146503	+	Silent	SNP	A	A	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	122146503	122146503	A	G	SNP	KPNA1	ENST00000344337	human	ensembl	69_37n	-1	known	silent	c.1311	p.S437	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA1	HGNC	ENSG00000114030	37	0	0.00	15	10	40.00	-	-	-
LAMA3	0	genome.wustl.edu	37	18	21355771	21355771	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	18	21355771	21355771	C	T	SNP	LAMA3	ENST00000313654	human	ensembl	69_37n	+1	known	missense	c.1289	p.P430L	0.985	pfam_EGF_laminin,smart_EGF-like,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl,superfamily_Growth_fac_rcpt,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EGF-like,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747	48	0	0.00	9	20	68.97	-	-	-
LARP1	0	genome.wustl.edu	37	5	154173389	154173390	+	Frame_Shift_Ins	INS	-	-	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	154173389	154173390	-	C	INS	LARP1	ENST00000336314	human	ensembl	69_37n	+1	known	frame_shift_ins	c.667_668	p.T226fs	0.998:0.999	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506	25	0	0.00	25	16	39.02	-	-	-
LOR	0	genome.wustl.edu	37	1	153233506	153233506	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	153233506	153233506	C	T	SNP	LOR	ENST00000368742	human	ensembl	69_37n	+1	known	silent	c.81	p.G27	0.000	NULL	NULL	-	no_errors	LOR	HGNC	ENSG00000203782	11	0	0.00	10	7	41.18	-	-	-
LOXHD1	0	genome.wustl.edu	37	18	44065084	44065084	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	18	44065084	44065084	C	T	SNP	LOXHD1	ENST00000536736	human	ensembl	69_37n	-1	known	missense	c.5894	p.G1965E	0.973	pfam_LipOase_LH2,superfamily_Lipase_LipOase,pfscan_LipOase_LH2	pfam_LipOase_LH2,superfamily_Lipase_LipOase,smart_LipOase_LH2,pfscan_LipOase_LH2	-	no_errors	LOXHD1	HGNC	ENSG00000167210	29	0	0.00	14	11	44.00	-	-	-
LRPAP1	0	genome.wustl.edu	37	4	3526751	3526751	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	4	3526751	3526751	C	T	SNP	LRPAP1	ENST00000500728	human	ensembl	69_37n	-1	known	missense	c.232	p.E78K	1.000	pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	pfam_Alpha_2_MRAP_C,pfam_MG_RAP_rcpt_1,superfamily_MG_RAP_rcpt_1	-	no_errors	LRPAP1	HGNC	ENSG00000163956	20	0	0.00	16	7	30.43	-	-	-
LRRN2	0	genome.wustl.edu	37	1	204587686	204587686	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	204587686	204587686	C	T	SNP	LRRN2	ENST00000367175	human	ensembl	69_37n	-1	known	missense	c.1435	p.E479K	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LRRN2	HGNC	ENSG00000170382	32	0	0.00	42	13	23.64	-	-	-
MADD	0	genome.wustl.edu	37	11	47330180	47330180	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	47330180	47330180	G	C	SNP	MADD	ENST00000311027	human	ensembl	69_37n	+1	known	missense	c.3798	p.K1266N	0.084	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	36	0	0.00	13	12	48.00	-	-	-
MAPKAPK5	0	genome.wustl.edu	37	12	112323732	112323732	+	Silent	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	112323732	112323732	C	G	SNP	MAPKAPK5	ENST00000202788	human	ensembl	69_37n	+1	known	silent	c.861	p.V287	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	MAPKAPK5	HGNC	ENSG00000089022	72	0	0.00	29	22	43.14	-	-	-
MASP1	0	genome.wustl.edu	37	3	186968079	186968079	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	186968079	186968079	C	T	SNP	MASP1	ENST00000296280	human	ensembl	69_37n	-1	known	silent	c.1050	p.L350	1.000	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Peptidase_S1_S6,pfam_CUB,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd,superfamily_Pept_cys/ser_Trypsin-like,superfamily_CUB,superfamily_Complement_control_module,smart_CUB,smart_EGF-like_Ca-bd,smart_Sushi_SCR_CCP,smart_Peptidase_S1_S6,prints_Peptidase_S1A,pfscan_CUB,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1_S6	-	no_errors	MASP1	HGNC	ENSG00000127241	23	0	0.00	10	9	47.37	-	-	-
MED13L	0	genome.wustl.edu	37	12	116429416	116429416	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	116429416	116429416	G	C	SNP	MED13L	ENST00000281928	human	ensembl	69_37n	-1	known	missense	c.3343	p.L1115V	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	26	0	0.00	13	7	35.00	-	-	-
MED14	0	genome.wustl.edu	37	X	40514245	40514245	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	40514245	40514245	G	A	SNP	MED14	ENST00000324817	human	ensembl	69_37n	-1	known	missense	c.4040	p.P1347L	0.995	NULL	pfam_Mediator_Med14	-	no_errors	MED14	HGNC	ENSG00000180182	64	0	0.00	32	27	45.76	-	-	-
MEX3C	0	genome.wustl.edu	37	18	48703857	48703857	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	18	48703857	48703857	T	-	DEL	MEX3C	ENST00000406189	human	ensembl	69_37n	-1	known	frame_shift_del	c.844	p.R282fs	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3C	HGNC	ENSG00000176624	48	0	0.00	15	2	11.76	-	-	-
MRPS25	0	genome.wustl.edu	37	3	15084312	15084312	+	RNA	SNP	T	T	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	15084312	15084312	T	C	SNP	MRPS25	ENST00000496484	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MRPS25	HGNC	ENSG00000131368	59	0	0.00	36	27	42.86	-	-	-
MTERFD1	0	genome.wustl.edu	37	8	97263176	97263176	+	Missense_Mutation	SNP	T	T	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	97263176	97263176	T	G	SNP	MTERFD1	ENST00000287025	human	ensembl	69_37n	-1	known	missense	c.635	p.N212T	1.000	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD1	HGNC	ENSG00000156469	51	0	0.00	21	19	47.50	-	-	-
NAA25	0	genome.wustl.edu	37	12	112516491	112516491	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	112516491	112516491	C	T	SNP	NAA25	ENST00000261745	human	ensembl	69_37n	-1	known	missense	c.532	p.E178K	1.000	NULL	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300	85	0	0.00	39	29	42.65	-	-	-
NEDD1	0	genome.wustl.edu	37	12	97303610	97303610	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	97303610	97303610	G	A	SNP	NEDD1	ENST00000557644	human	ensembl	69_37n	+1	known	missense	c.94	p.V32M	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NEDD1	HGNC	ENSG00000139350	22	0	0.00	7	6	46.15	-	-	-
NES	0	genome.wustl.edu	37	1	156641423	156641423	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	156641423	156641423	C	T	SNP	NES	ENST00000368223	human	ensembl	69_37n	-1	known	missense	c.2557	p.E853K	0.428	NULL	pfam_F	-	no_errors	NES	HGNC	ENSG00000132688	28	0	0.00	39	12	23.53	-	-	-
NT5C2	0	genome.wustl.edu	37	10	104853661	104853661	+	RNA	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	10	104853661	104853661	G	C	SNP	NT5C2	ENST00000469228	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	NT5C2	HGNC	ENSG00000076685	21	0	0.00	3	3	50.00	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228552692	228552692	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	228552692	228552692	G	A	SNP	OBSCN	ENST00000441106	human	ensembl	69_37n	+1	known	missense	c.2701	p.E901K	0.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ig_I-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Immunoglobulin,pfam_DH-domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub2,smart_Ig_sub,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	OBSCN	HGNC	ENSG00000154358	88	0	0.00	69	28	28.87	-	-	-
OCSTAMP	0	genome.wustl.edu	37	20	45174689	45174689	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	45174689	45174689	G	A	SNP	OCSTAMP	ENST00000279028	human	ensembl	69_37n	-1	known	silent	c.324	p.L108	0.871	NULL	pfam_DC_STAMP-like	-	no_errors	OCSTAMP	HGNC	ENSG00000149635	30	0	0.00	7	5	41.67	-	-	-
OGG1	0	genome.wustl.edu	37	3	9791867	9791867	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	9791867	9791867	G	A	SNP	OGG1	ENST00000436092	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	OGG1	HGNC	ENSG00000114026	16	0	0.00	2	6	75.00	-	-	-
ONECUT3	0	genome.wustl.edu	37	19	1775382	1775382	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	1775382	1775382	G	A	SNP	ONECUT3	ENST00000382349	human	ensembl	69_37n	+1	known	missense	c.1423	p.E475K	1.000	superfamily_Homeodomain-like,smart_Homeodomain	pfam_Hmoeo_CUT,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Hmoeo_CUT	-	no_errors	ONECUT3	HGNC	ENSG00000205922	11	0	0.00	6	4	40.00	-	-	-
OR10J3	0	genome.wustl.edu	37	1	159283943	159283943	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	159283943	159283943	G	A	SNP	OR10J3	ENST00000332217	human	ensembl	69_37n	-1	known	silent	c.507	p.F169	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266	10	0	0.00	26	7	21.21	-	-	-
OR2AK2	0	genome.wustl.edu	37	1	248128807	248128807	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	248128807	248128807	C	T	SNP	OR2AK2	ENST00000366480	human	ensembl	69_37n	+1	known	silent	c.174	p.I58	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR2AK2	HGNC	ENSG00000187080	27	0	0.00	44	17	27.87	-	-	-
OR4M1	0	genome.wustl.edu	37	14	20249178	20249178	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	14	20249178	20249178	G	A	SNP	OR4M1	ENST00000315957	human	ensembl	69_37n	+1	known	missense	c.697	p.E233K	1.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4M1	HGNC	ENSG00000176299	75	0	0.00	28	17	37.78	-	-	-
OR5M11	0	genome.wustl.edu	37	11	56309909	56309909	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	56309909	56309909	G	C	SNP	OR5M11	ENST00000528616	human	ensembl	69_37n	-1	known	silent	c.825	p.V275	0.981	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR5M11	HGNC	ENSG00000255223	18	0	0.00	7	10	58.82	-	-	-
PCDHB7	0	genome.wustl.edu	37	5	140554697	140554697	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	140554697	140554697	G	T	SNP	PCDHB7	ENST00000231137	human	ensembl	69_37n	+1	known	nonsense	c.2281	p.E761*	0.999	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	197	0	0.00	164	32	16.33	-	-	-
PCLO	0	genome.wustl.edu	37	7	82467655	82467655	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	82467655	82467655	G	A	SNP	PCLO	ENST00000333891	human	ensembl	69_37n	-1	known	nonsense	c.14101	p.Q4701*	1.000	superfamily_C2_Ca/lipid-bd_dom_CaLB	pfam_Znf_piccolo,pfam_C2_Ca-dep,pfam_PDZ,superfamily_C2_Ca/lipid-bd_dom_CaLB,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_Ca-dep,pfscan_C2_membr_targeting,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	62	0	0.00	29	11	27.50	-	-	-
PDE4DIP	0	genome.wustl.edu	37	1	144879078	144879078	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	144879078	144879078	C	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	69_37n	-1	known	missense	c.4372	p.E1458Q	0.977	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	68	0	0.00	60	8	11.76	-	-	-
PEX6	0	genome.wustl.edu	37	6	42934590	42934590	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	42934590	42934590	C	T	SNP	PEX6	ENST00000304611	human	ensembl	69_37n	-1	known	missense	c.1891	p.V631M	1.000	NULL	pfam_ATPase_AAA_core,smart_AAA+_ATPase	-	no_errors	PEX6	HGNC	ENSG00000124587	27	0	0.00	17	10	37.04	-	-	-
PGBD2	0	genome.wustl.edu	37	1	249212291	249212291	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	249212291	249212291	G	A	SNP	PGBD2	ENST00000329291	human	ensembl	69_37n	+1	known	missense	c.1508	p.R503K	0.889	NULL	NULL	-	no_errors	PGBD2	HGNC	ENSG00000185220	30	0	0.00	34	21	38.18	-	-	-
PITPNM1	0	genome.wustl.edu	37	11	67269467	67269467	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	67269467	67269467	C	T	SNP	PITPNM1	ENST00000356404	human	ensembl	69_37n	-1	known	missense	c.506	p.R169Q	1.000	pfam_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	35	0	0.00	19	13	40.62	-	-	-
PLIN2	0	genome.wustl.edu	37	9	19108734	19108734	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	9	19108734	19108734	G	A	SNP	PLIN2	ENST00000464326	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.917	-	-	-	no_errors	PLIN2	HGNC	ENSG00000147872	23	0	0.00	16	7	30.43	-	-	-
PLOD3	0	genome.wustl.edu	37	7	100860012	100860012	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	100860012	100860012	G	A	SNP	PLOD3	ENST00000223127	human	ensembl	69_37n	-1	known	silent	c.165	p.F55	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397	26	0	0.00	17	14	45.16	-	-	-
PODN	0	genome.wustl.edu	37	1	53535792	53535792	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	53535792	53535792	G	A	SNP	PODN	ENST00000312553	human	ensembl	69_37n	+1	known	missense	c.409	p.E137K	0.995	smart_LRR-contain_N	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348	48	0	0.00	29	11	27.50	-	-	-
PRIC285	0	genome.wustl.edu	37	20	62202785	62202785	+	RNA	SNP	A	A	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	62202785	62202785	A	G	SNP	PRIC285	ENST00000479540	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.741	-	-	-	no_errors	RP4-697K14.7	Clone_based_vega_gene	ENSG00000130589	28	0	0.00	26	16	38.10	-	-	-
PRKCE	0	genome.wustl.edu	37	2	45879318	45879318	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	45879318	45879318	C	T	SNP	PRKCE	ENST00000306156	human	ensembl	69_37n	+1	known	missense	c.79	p.H27Y	1.000	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_C2_Ca-dep,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	PRKCE	HGNC	ENSG00000171132	27	0	0.00	2	11	84.62	-	-	-
PRSS12	0	genome.wustl.edu	37	4	119273484	119273484	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	4	119273484	119273484	C	T	SNP	PRSS12	ENST00000296498	human	ensembl	69_37n	-1	known	missense	c.392	p.R131Q	0.224	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Srcr_rcpt,pfam_Peptidase_S1_S6,pfam_Kringle,superfamily_Pept_cys/ser_Trypsin-like,superfamily_Srcr_rcpt-rel,superfamily_Kringle-like,smart_Kringle,smart_Srcr_rcpt-rel,smart_Peptidase_S1_S6,pfscan_Kringle,pfscan_Srcr_rcpt,pfscan_Peptidase_S1_S6,prints_Srcr_rcpt,prints_Peptidase_S1A	-	no_errors	PRSS12	HGNC	ENSG00000164099	15	0	0.00	8	5	38.46	-	-	-
RALGAPA2	0	genome.wustl.edu	37	20	20599982	20599982	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	20599982	20599982	C	T	SNP	RALGAPA2	ENST00000202677	human	ensembl	69_37n	-1	known	missense	c.1478	p.R493K	1.000	NULL	pfam_Rap_GAP,superfamily_ARM-type_fold,pfscan_Rap_GAP	-	no_errors	RALGAPA2	HGNC	ENSG00000188559	51	0	0.00	16	11	40.74	-	-	-
REV3L	0	genome.wustl.edu	37	6	111697741	111697741	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	111697741	111697741	G	T	SNP	REV3L	ENST00000358835	human	ensembl	69_37n	-1	known	missense	c.1817	p.T606K	0.006	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	40	0	0.00	21	3	12.50	-	-	-
RFXAP	0	genome.wustl.edu	37	13	37393936	37393936	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	13	37393936	37393936	G	A	SNP	RFXAP	ENST00000255476	human	ensembl	69_37n	+1	known	missense	c.442	p.E148K	1.000	NULL	NULL	-	no_errors	RFXAP	HGNC	ENSG00000133111	14	0	0.00	4	12	75.00	-	-	-
RGL4	0	genome.wustl.edu	37	22	24038606	24038606	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	22	24038606	24038606	G	A	SNP	RGL4	ENST00000441897	human	ensembl	69_37n	+1	known	missense	c.1178	p.R393K	0.002	smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	-	no_errors	RGL4	HGNC	ENSG00000159496	40	0	0.00	21	18	46.15	-	-	-
RPS6KC1	0	genome.wustl.edu	37	1	213446633	213446633	+	RNA	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	213446633	213446633	C	T	SNP	RPS6KC1	ENST00000490299	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPS6KC1	HGNC	ENSG00000136643	39	0	0.00	66	15	18.52	-	-	-
RPTOR	0	genome.wustl.edu	37	17	78936301	78936301	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	17	78936301	78936301	G	A	SNP	RPTOR	ENST00000306801	human	ensembl	69_37n	+1	known	missense	c.3733	p.E1245K	0.999	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_HEAT,pfam_WD40_repeat,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Raptor	-	no_errors	RPTOR	HGNC	ENSG00000141564	53	0	0.00	26	13	33.33	-	-	-
RREB1	0	genome.wustl.edu	37	6	7189489	7189489	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	7189489	7189489	C	T	SNP	RREB1	ENST00000379938	human	ensembl	69_37n	+1	known	missense	c.359	p.S120F	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	29	0	0.00	12	6	33.33	-	-	-
SCAF4	0	genome.wustl.edu	37	21	33103985	33103985	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	21	33103985	33103985	G	-	DEL	SCAF4	ENST00000286835	human	ensembl	69_37n	-1	known	frame_shift_del	c.21	p.F7fs	1.000	superfamily_ENTH_VHS,smart_RNA_polymerase_II_lsu_CTD	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_RNA_polymerase_II_lsu_CTD,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	19	0	0.00	4	2	33.33	-	-	-
SCAP	0	genome.wustl.edu	37	3	47484391	47484391	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	47484391	47484391	G	A	SNP	SCAP	ENST00000265565	human	ensembl	69_37n	-1	known	silent	c.93	p.L31	1.000	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	58	0	0.00	30	15	33.33	-	-	-
SELE	0	genome.wustl.edu	37	1	169696916	169696916	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	169696916	169696916	G	A	SNP	SELE	ENST00000333360	human	ensembl	69_37n	-1	known	nonsense	c.1432	p.Q478*	0.975	pfam_Sushi_SCR_CCP,superfamily_Complement_control_module,smart_Sushi_SCR_CCP,smart_EGF-like,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_C-type_lectin,pfam_EGF-like_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_C-type_lectin,smart_EGF-like,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELE	HGNC	ENSG00000007908	27	0	0.00	28	8	22.22	-	-	-
SEPT7	0	genome.wustl.edu	37	7	35942763	35942763	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	35942763	35942763	C	T	SNP	SEPT7	ENST00000399034	human	ensembl	69_37n	+1	known	silent	c.1215	p.F405	1.000	pirsf_Septin	pfam_Cell_div_GTP-bd,pirsf_Septin,prints_Septin7	-	no_errors	SEPT7	HGNC	ENSG00000122545	32	0	0.00	15	11	42.31	-	-	-
SLC20A2	0	genome.wustl.edu	37	8	42294814	42294814	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	42294814	42294814	C	T	SNP	SLC20A2	ENST00000342228	human	ensembl	69_37n	-1	known	missense	c.1216	p.D406N	0.046	pfam_Phos_transporter	pfam_Phos_transporter	-	no_errors	SLC20A2	HGNC	ENSG00000168575	88	0	0.00	77	9	10.47	-	-	-
SLC5A6	0	genome.wustl.edu	37	2	27428898	27428898	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	27428898	27428898	G	T	SNP	SLC5A6	ENST00000310574	human	ensembl	69_37n	-1	known	missense	c.575	p.A192D	0.989	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074	29	0	0.00	33	5	13.16	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49793936	49793936	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49793936	49793936	G	A	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	silent	c.1867	p.L623	0.960	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	17	0	0.00	17	10	37.04	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49796595	49796595	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49796595	49796595	G	C	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	missense	c.1663	p.R555G	0.007	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	37	0	0.00	11	4	26.67	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49796601	49796601	+	Missense_Mutation	SNP	A	A	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49796601	49796601	A	G	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	missense	c.1657	p.F553L	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	38	0	0.00	11	4	26.67	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49812289	49812289	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49812289	49812289	G	A	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	missense	c.1073	p.A358V	0.001	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	24	0	0.00	11	4	25.00	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49812932	49812932	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49812932	49812932	G	A	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	silent	c.852	p.I284	0.597	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	36	0	0.00	17	5	22.73	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49813324	49813324	+	Missense_Mutation	SNP	G	G	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	49813324	49813324	G	T	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	missense	c.673	p.P225T	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	45	0	0.00	27	12	30.77	-	-	-
SLCO1A2	0	genome.wustl.edu	37	12	21445246	21445246	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	12	21445246	21445246	G	A	SNP	SLCO1A2	ENST00000307378	human	ensembl	69_37n	-1	known	nonsense	c.1462	p.Q488*	0.155	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal-type_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1A2	HGNC	ENSG00000084453	35	0	0.00	10	7	41.18	-	-	-
SNAP29	0	genome.wustl.edu	37	22	21237758	21237758	+	Splice_Site	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	22	21237758	21237758	G	A	SNP	SNAP29	ENST00000215730	human	ensembl	69_37n	+1	known	splice_site	c.521-1	e4-1	0.821	-	-	-	no_errors	SNAP29	HGNC	ENSG00000099940	57	0	0.00	40	6	13.04	-	-	-
SPIRE2	0	genome.wustl.edu	37	16	89924757	89924757	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	89924757	89924757	C	T	SNP	SPIRE2	ENST00000378247	human	ensembl	69_37n	+1	known	silent	c.1114	p.L372	1.000	NULL	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE2	HGNC	ENSG00000204991	60	0	0.00	14	22	61.11	-	-	-
SQRDL	0	genome.wustl.edu	37	15	45965918	45965918	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	45965918	45965918	C	G	SNP	SQRDL	ENST00000260324	human	ensembl	69_37n	+1	known	missense	c.573	p.I191M	0.999	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	SQRDL	HGNC	ENSG00000137767	51	0	0.00	24	9	27.27	-	-	-
SRP19	0	genome.wustl.edu	37	5	112196928	112196928	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	112196928	112196928	G	A	SNP	SRP19	ENST00000503445	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRP19	HGNC	ENSG00000153037	47	0	0.00	20	13	39.39	-	-	-
SRRM2	0	genome.wustl.edu	37	16	2815000	2815000	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	2815000	2815000	C	T	SNP	SRRM2	ENST00000301740	human	ensembl	69_37n	+1	known	nonsense	c.4471	p.Q1491*	1.000	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	26	0	0.00	31	9	22.50	-	-	-
SRRM2	0	genome.wustl.edu	37	16	2816501	2816501	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	16	2816501	2816501	G	A	SNP	SRRM2	ENST00000301740	human	ensembl	69_37n	+1	known	missense	c.5972	p.R1991Q	0.404	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	17	0	0.00	17	13	43.33	-	-	-
SRXN1	0	genome.wustl.edu	37	20	629441	629441	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	20	629441	629441	C	T	SNP	SRXN1	ENST00000381962	human	ensembl	69_37n	-1	known	missense	c.331	p.E111K	1.000	pfam_ParBc,superfamily_ParBc,smart_ParBc,pirsf_Sulfiredoxin	pfam_ParBc,superfamily_ParBc,smart_ParBc,pirsf_Sulfiredoxin	-	no_errors	SRXN1	HGNC	ENSG00000172070	65	0	0.00	37	22	37.29	-	-	-
SYN2	0	genome.wustl.edu	37	3	12226464	12226464	+	RNA	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	12226464	12226464	G	C	SNP	SYN2	ENST00000425297	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SYN2	HGNC	ENSG00000157152	8	0	0.00	7	5	41.67	-	-	-
SYN2	0	genome.wustl.edu	37	3	12226682	12226682	+	RNA	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	3	12226682	12226682	G	C	SNP	SYN2	ENST00000425297	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.161	-	-	-	no_errors	SYN2	HGNC	ENSG00000157152	15	0	0.00	14	9	39.13	-	-	-
SYT12	0	genome.wustl.edu	37	11	66811263	66811263	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	11	66811263	66811263	C	T	SNP	SYT12	ENST00000393946	human	ensembl	69_37n	+1	known	missense	c.776	p.S259F	0.973	superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep	pfam_C2_Ca-dep,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	SYT12	HGNC	ENSG00000173227	20	0	0.00	21	7	25.00	-	-	-
TAB3	0	genome.wustl.edu	37	X	30873431	30873431	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	30873431	30873431	C	T	SNP	TAB3	ENST00000288422	human	ensembl	69_37n	-1	known	silent	c.351	p.L117	0.996	NULL	pfam_CUE,pfam_Znf_RanBP2,superfamily_UBA-like,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB3	HGNC	ENSG00000157625	45	0	0.00	32	10	23.81	-	-	-
TBCB	0	genome.wustl.edu	37	19	36611614	36611614	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	36611614	36611614	C	T	SNP	TBCB	ENST00000221855	human	ensembl	69_37n	+1	known	silent	c.261	p.V87	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	TBCB	HGNC	ENSG00000105254	23	0	0.00	11	7	38.89	-	-	-
TNFAIP8	0	genome.wustl.edu	37	5	118728890	118728890	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	118728890	118728890	G	C	SNP	TNFAIP8	ENST00000504771	human	ensembl	69_37n	+1	known	missense	c.411	p.E137D	0.988	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8	HGNC	ENSG00000145779	67	0	0.00	34	28	45.16	-	-	-
TNPO1	0	genome.wustl.edu	37	5	72112537	72112537	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	72112537	72112537	G	A	SNP	TNPO1	ENST00000515483	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TNPO1	HGNC	ENSG00000083312	39	0	0.00	29	11	27.50	-	-	-
TRPM3	0	genome.wustl.edu	37	9	73233936	73233936	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	9	73233936	73233936	C	T	SNP	TRPM3	ENST00000396280	human	ensembl	69_37n	-1	known	missense	c.1714	p.D572N	1.000	NULL	pfam_Ion_trans_dom	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	TRPM3	HGNC	ENSG00000083067	36	0	0.00	15	9	37.50	-	-	-
TSHZ3	0	genome.wustl.edu	37	19	31767861	31767861	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	31767861	31767861	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	69_37n	-1	known	silent	c.2838	p.I946	1.000	superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Homeodomain,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	44	0	0.00	19	16	45.71	-	-	-
TTN	0	genome.wustl.edu	37	2	179463375	179463375	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	179463375	179463375	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.49265	p.P16422L	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	58	0	0.00	15	11	42.31	-	-	-
TTN	0	genome.wustl.edu	37	2	179539799	179539799	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	2	179539799	179539799	G	A	SNP	TTN	ENST00000342992	human	ensembl	69_37n	-1	known	missense	c.30676	p.L10226F	0.012	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like	-	no_errors	TTN	HGNC	ENSG00000155657	61	0	0.00	4	5	55.56	-	-	-
UBR1	0	genome.wustl.edu	37	15	43363018	43363018	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	43363018	43363018	C	T	SNP	UBR1	ENST00000290650	human	ensembl	69_37n	-1	known	missense	c.634	p.E212K	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	63	0	0.00	31	19	38.00	-	-	-
UBR1	0	genome.wustl.edu	37	15	43363024	43363024	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	15	43363024	43363024	C	T	SNP	UBR1	ENST00000290650	human	ensembl	69_37n	-1	known	missense	c.628	p.E210K	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	63	0	0.00	31	18	36.73	-	-	-
UBR2	0	genome.wustl.edu	37	6	42620364	42620364	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	42620364	42620364	C	T	SNP	UBR2	ENST00000372899	human	ensembl	69_37n	+1	known	missense	c.2750	p.S917L	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR2	HGNC	ENSG00000024048	24	0	0.00	27	4	12.90	-	-	-
UBR4	0	genome.wustl.edu	37	1	19487465	19487465	+	Silent	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	19487465	19487465	C	T	SNP	UBR4	ENST00000375267	human	ensembl	69_37n	-1	known	silent	c.5352	p.K1784	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	35	0	0.00	3	7	70.00	-	-	-
USP17L2	0	genome.wustl.edu	37	8	11995160	11995160	+	Silent	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	8	11995160	11995160	G	C	SNP	USP17L2	ENST00000333796	human	ensembl	69_37n	-1	known	silent	c.1110	p.L370	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19	-	no_errors	USP17L2	HGNC	ENSG00000223443	57	0	0.00	42	13	23.64	-	-	-
USP45	0	genome.wustl.edu	37	6	99924030	99924030	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	99924030	99924030	C	-	DEL	USP45	ENST00000327681	human	ensembl	69_37n	-1	known	frame_shift_del	c.922	p.E308fs	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfam_Znf_UBP,superfamily_Znf_FYVE_PHD,pfscan_Znf_UBP,pfscan_Peptidase_C19	-	no_errors	USP45	HGNC	ENSG00000123552	49	0	0.00	14	2	12.50	-	-	-
VCAN	0	genome.wustl.edu	37	5	82868278	82868278	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	5	82868278	82868278	C	T	SNP	VCAN	ENST00000265077	human	ensembl	69_37n	+1	known	missense	c.9779	p.S3260F	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EGF-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Complement_control_module,smart_Ig_sub,smart_Link,smart_EGF-like,smart_EGF-like_Ca-bd,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	47	0	0.00	14	9	39.13	-	-	-
VPS45	0	genome.wustl.edu	37	1	150053517	150053517	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	150053517	150053517	G	A	SNP	VPS45	ENST00000369130	human	ensembl	69_37n	+1	known	missense	c.781	p.E261K	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	VPS45	HGNC	ENSG00000136631	34	0	0.00	49	10	16.95	-	-	-
WDFY3-AS2	0	genome.wustl.edu	37	4	85888197	85888197	+	RNA	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	4	85888197	85888197	C	G	SNP	WDFY3-AS2	ENST00000318186	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.701	-	-	-	no_errors	WDFY3-AS2	HGNC	ENSG00000180769	39	0	0.00	17	15	46.88	-	-	-
XIST	0	genome.wustl.edu	37	X	73050952	73050952	+	RNA	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	73050952	73050952	G	C	SNP	XIST	ENST00000429829	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	85	0	0.00	39	25	39.06	-	-	-
YARS	0	genome.wustl.edu	37	1	33248074	33248074	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	1	33248074	33248074	G	A	SNP	YARS	ENST00000373477	human	ensembl	69_37n	-1	known	missense	c.973	p.R325W	1.000	NULL	pfam_aa-tRNA-synth_Ic,pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold-like,pfscan_tRNA-bd_dom,prints_Tyr-tRNA-synth,tigrfam_Tyr-tRNA-synth	-	no_errors	YARS	HGNC	ENSG00000134684	49	0	0.00	37	25	40.32	-	-	-
ZNF160	0	genome.wustl.edu	37	19	53571914	53571914	+	Missense_Mutation	SNP	C	C	T			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	53571914	53571914	C	T	SNP	ZNF160	ENST00000418871	human	ensembl	69_37n	-1	known	missense	c.1873	p.E625K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF160	HGNC	ENSG00000170949	38	0	0.00	20	7	25.93	-	-	-
ZNF208	0	genome.wustl.edu	37	19	22155532	22155532	+	Missense_Mutation	SNP	C	C	G			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	22155532	22155532	C	G	SNP	ZNF208	ENST00000397126	human	ensembl	69_37n	-1	known	missense	c.2304	p.K768N	0.071	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	23	0	0.00	5	8	61.54	-	-	-
ZNF22	0	genome.wustl.edu	37	10	45499206	45499206	+	Silent	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	10	45499206	45499206	G	A	SNP	ZNF22	ENST00000298299	human	ensembl	69_37n	+1	known	silent	c.390	p.Q130	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF22	HGNC	ENSG00000165512	25	0	0.00	17	11	39.29	-	-	-
ZNF292	0	genome.wustl.edu	37	6	87955222	87955222	+	Missense_Mutation	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	6	87955222	87955222	G	A	SNP	ZNF292	ENST00000369577	human	ensembl	69_37n	+1	known	missense	c.880	p.E294K	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	18	0	0.00	3	3	50.00	-	-	-
ZNF471	0	genome.wustl.edu	37	19	57036209	57036209	+	Missense_Mutation	SNP	G	G	C			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	19	57036209	57036209	G	C	SNP	ZNF471	ENST00000308031	human	ensembl	69_37n	+1	known	missense	c.773	p.G258A	0.735	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263	17	0	0.00	10	6	37.50	-	-	-
ZNF630	0	genome.wustl.edu	37	X	47919407	47919407	+	Missense_Mutation	SNP	T	T	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	X	47919407	47919407	T	A	SNP	ZNF630	ENST00000409324	human	ensembl	69_37n	-1	known	missense	c.424	p.I142F	0.008	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF630	HGNC	ENSG00000221994	51	0	0.00	30	21	41.18	-	-	-
ZNF733P	0	genome.wustl.edu	37	7	62752455	62752455	+	RNA	SNP	G	G	A			TCGA-E2-A2P6-01A-11D-A19Y-09	TCGA-E2-A2P6-10B-01D-A19Y-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	b5d4557a-10ec-430e-a01a-c8b79c6fe3ea	bf78c46f-db59-42d8-85a1-56bb2498126e	7	62752455	62752455	G	A	SNP	ZNF733P	ENST00000331425	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	39	0	0.00	20	9	31.03	-	-	-
