Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCD4	0	genome.wustl.edu	37	14	74758989	74758989	+	Splice_Site	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	14	74758989	74758989	C	T	SNP	ABCD4	ENST00000356924	human	ensembl	69_37n	-1	known	splice_site	c.1118+1	e11+1	1.000	-	-	-	no_errors	ABCD4	HGNC	ENSG00000119688	63	0	0.00	29	10	25.64	-	-	-
APOBEC3D	0	genome.wustl.edu	37	22	39418878	39418878	+	Silent	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	22	39418878	39418878	C	T	SNP	APOBEC3D	ENST00000216099	human	ensembl	69_37n	+1	known	silent	c.69	p.N23	0.000	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3D	HGNC	ENSG00000243811	176	0	0.00	77	43	35.83	-	-	-
ATCAY	0	genome.wustl.edu	37	19	3907867	3907867	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	19	3907867	3907867	G	A	SNP	ATCAY	ENST00000301260	human	ensembl	69_37n	+1	known	missense	c.494	p.R165H	1.000	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	ATCAY	HGNC	ENSG00000167654	42	0	0.00	20	11	35.48	-	-	-
BSN	0	genome.wustl.edu	37	3	49689363	49689363	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	3	49689363	49689363	C	T	SNP	BSN	ENST00000296452	human	ensembl	69_37n	+1	known	missense	c.2374	p.R792C	0.379	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	53	0	0.00	14	7	33.33	-	-	-
CCDC144A	0	genome.wustl.edu	37	17	16638041	16638041	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	17	16638041	16638041	A	T	SNP	CCDC144A	ENST00000360524	human	ensembl	69_37n	+1	known	missense	c.2456	p.H819L	0.170	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	57	0	0.00	35	11	23.91	-	-	-
CLCN7	0	genome.wustl.edu	37	16	1497552	1497552	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	16	1497552	1497552	G	T	SNP	CLCN7	ENST00000565596	human	ensembl	69_37n	-1	putative	missense	c.209	p.P70Q	0.007	NULL	pfam_Cysta_beta_synth_core,smart_Cysta_beta_synth_core	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	CLCN7	HGNC	ENSG00000103249	15	0	0.00	9	4	30.77	-	-	-
COL1A2	0	genome.wustl.edu	37	7	94041434	94041434	+	Splice_Site	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	7	94041434	94041434	G	A	SNP	COL1A2	ENST00000297268	human	ensembl	69_37n	+1	known	splice_site	c.1404+1	e24+1	1.000	-	-	-	no_errors	COL1A2	HGNC	ENSG00000164692	210	0	0.00	136	22	13.92	-	-	-
CSTF1	0	genome.wustl.edu	37	20	54974292	54974292	+	Silent	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	20	54974292	54974292	C	T	SNP	CSTF1	ENST00000217109	human	ensembl	69_37n	+1	known	silent	c.915	p.D305	0.159	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CSTF1	HGNC	ENSG00000101138	182	1	0.55	134	37	21.64	-	-	-
DMD	0	genome.wustl.edu	37	X	31792301	31792301	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	X	31792301	31792301	G	A	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	nonsense	c.7318	p.Q2440*	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	69	0	0.00	58	9	13.43	-	-	-
DNAJC13	0	genome.wustl.edu	37	3	132213003	132213004	+	In_Frame_Ins	INS	-	-	CTT			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	3	132213003	132213004	-	CTT	INS	DNAJC13	ENST00000260818	human	ensembl	69_37n	+1	known	in_frame_ins	c.3841_3842	p.D1281in_frame_insAY	1.000:1.000	superfamily_ARM-type_fold	pfam_DnaJ_N,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_N,pfscan_DnaJ_N	-	no_errors	DNAJC13	HGNC	ENSG00000138246	90	0	0.00	61	28	31.46	-	-	-
ENAH	0	genome.wustl.edu	37	1	225702347	225702347	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	1	225702347	225702347	G	A	SNP	ENAH	ENST00000366844	human	ensembl	69_37n	-1	known	missense	c.1169	p.T390I	1.000	NULL	pfam_EVH1,pfam_VASP_tetra,smart_EVH1,pfscan_EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380	35	0	0.00	25	25	50.00	-	-	-
ERBB2	0	genome.wustl.edu	37	17	37880261	37880261	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	17	37880261	37880261	G	T	SNP	ERBB2	ENST00000269571	human	ensembl	69_37n	+1	known	missense	c.2305	p.D769Y	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	151	1	0.66	69	71	50.71	-	-	-
FAM63A	0	genome.wustl.edu	37	1	150969810	150969810	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	1	150969810	150969810	C	T	SNP	FAM63A	ENST00000361738	human	ensembl	69_37n	-1	known	missense	c.1507	p.E503K	0.966	NULL	pfam_DUF544	-	no_errors	FAM63A	HGNC	ENSG00000143409	56	0	0.00	12	57	82.61	-	-	-
GALC	0	genome.wustl.edu	37	14	88454828	88454828	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	14	88454828	88454828	G	C	SNP	GALC	ENST00000261304	human	ensembl	69_37n	-1	known	missense	c.235	p.R79G	1.000	pfam_Glyco_hydro_59,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_59,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_59	-	no_errors	GALC	HGNC	ENSG00000054983	107	0	0.00	60	23	27.71	-	-	-
GLUL	0	genome.wustl.edu	37	1	182355487	182355487	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	1	182355487	182355487	G	A	SNP	GLUL	ENST00000311223	human	ensembl	69_37n	-1	known	nonsense	c.379	p.Q127*	1.000	pfam_Gln_synth_cat_dom	pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta	-	no_errors	GLUL	HGNC	ENSG00000135821	113	0	0.00	131	25	16.03	-	-	-
HSD17B3	0	genome.wustl.edu	37	9	99064321	99064321	+	Silent	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	9	99064321	99064321	C	T	SNP	HSD17B3	ENST00000375263	human	ensembl	69_37n	-1	known	silent	c.66	p.A22	0.384	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B3	HGNC	ENSG00000130948	136	1	0.72	54	27	33.33	-	-	-
KDELC2	0	genome.wustl.edu	37	11	108361856	108361856	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	11	108361856	108361856	G	T	SNP	KDELC2	ENST00000323468	human	ensembl	69_37n	-1	known	missense	c.241	p.P81T	0.160	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC2	HGNC	ENSG00000178202	71	0	0.00	48	22	31.43	-	-	-
LHX9	0	genome.wustl.edu	37	1	197890707	197890707	+	Silent	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	1	197890707	197890707	C	T	SNP	LHX9	ENST00000367387	human	ensembl	69_37n	+1	known	silent	c.651	p.N217	0.547	NULL	pfam_Znf_LIM,pfam_Homeodomain,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeodomain,pfscan_Znf_LIM,pfscan_Homeodomain	-	no_errors	LHX9	HGNC	ENSG00000143355	35	0	0.00	28	5	15.15	-	-	-
MED13	0	genome.wustl.edu	37	17	60088032	60088032	+	Nonsense_Mutation	SNP	T	T	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	17	60088032	60088032	T	A	SNP	MED13	ENST00000397786	human	ensembl	69_37n	-1	known	nonsense	c.1846	p.K616*	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510	184	0	0.00	189	53	21.81	-	-	-
MELK	0	genome.wustl.edu	37	9	36594707	36594707	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	9	36594707	36594707	A	G	SNP	MELK	ENST00000298048	human	ensembl	69_37n	+1	known	missense	c.344	p.Q115R	1.000	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase-assoc_KA1,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_Kinase-assoc_KA1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MELK	HGNC	ENSG00000165304	148	0	0.00	87	46	34.59	-	-	-
MPI	0	genome.wustl.edu	37	15	75190052	75190052	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	15	75190052	75190052	G	A	SNP	MPI	ENST00000352410	human	ensembl	69_37n	+1	known	missense	c.1253	p.R418H	1.000	superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase	pfam_Man6P_Isoase-1,superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase,prints_Mannose-6-P_Isomerase,tigrfam_Man6P_Isoase-1	-	no_errors	MPI	HGNC	ENSG00000178802	192	0	0.00	65	39	37.50	-	-	-
MYH2	0	genome.wustl.edu	37	17	10432037	10432037	+	Silent	SNP	A	A	G			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	17	10432037	10432037	A	G	SNP	MYH2	ENST00000245503	human	ensembl	69_37n	-1	known	silent	c.3714	p.A1238	0.074	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	115	0	0.00	70	17	19.54	-	-	-
NDUFA7	0	genome.wustl.edu	37	19	8381508	8381508	+	Silent	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	19	8381508	8381508	G	A	SNP	NDUFA7	ENST00000301457	human	ensembl	69_37n	-1	known	silent	c.123	p.L41	0.998	pfam_NADH-UbQ_OxRdtase_B14.5a_su	pfam_NADH-UbQ_OxRdtase_B14.5a_su	-	no_errors	NDUFA7	HGNC	ENSG00000167774	77	0	0.00	45	9	16.67	-	-	-
OR4C13	0	genome.wustl.edu	37	11	49974275	49974275	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	11	49974275	49974275	G	A	SNP	OR4C13	ENST00000555099	human	ensembl	69_37n	+1	known	missense	c.301	p.G101R	0.251	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR4C13	HGNC	ENSG00000258817	146	0	0.00	107	40	27.21	-	-	-
PI15	0	genome.wustl.edu	37	8	75761435	75761435	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	8	75761435	75761435	G	C	SNP	PI15	ENST00000260113	human	ensembl	69_37n	+1	known	missense	c.724	p.D242H	1.000	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI15	HGNC	ENSG00000137558	188	0	0.00	88	81	47.93	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178927980	178927980	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	3	178927980	178927980	T	C	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1258	p.C420R	1.000	pfam_PI3K_C2_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_C2_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	114	0	0.00	54	56	50.91	-	-	-
PLXNA1	0	genome.wustl.edu	37	3	126736504	126736504	+	Silent	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	3	126736504	126736504	C	T	SNP	PLXNA1	ENST00000393409	human	ensembl	69_37n	+1	known	silent	c.3513	p.L1171	1.000	pfam_IPT_TIG_rcpt,superfamily_Ig_E-set,smart_IPT_TIG_rcpt	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semaphorin/CD100_Ag,pfam_IPT_TIG_rcpt,pfam_Plexin_repeat,superfamily_Semaphorin/CD100_Ag,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_IPT_TIG_rcpt,pfscan_Semaphorin/CD100_Ag	-	no_errors	PLXNA1	HGNC	ENSG00000114554	84	0	0.00	21	12	36.36	-	-	-
RBL1	0	genome.wustl.edu	37	20	35627233	35627233	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	20	35627233	35627233	C	A	SNP	RBL1	ENST00000373664	human	ensembl	69_37n	-1	known	missense	c.3136	p.V1046F	0.999	pfam_Rb_C	pfam_RB_A,pfam_RB_B,pfam_DUF3452_retinoblatoma-assoc,pfam_Rb_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RBL1	HGNC	ENSG00000080839	343	1	0.29	250	79	24.01	-	-	-
RNF41	0	genome.wustl.edu	37	12	56607765	56607765	+	Nonsense_Mutation	SNP	C	C	A			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	12	56607765	56607765	C	A	SNP	RNF41	ENST00000345093	human	ensembl	69_37n	-1	known	nonsense	c.67	p.G23*	1.000	pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,smart_Znf_RING,pfscan_Znf_RING	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852	189	0	0.00	97	47	32.64	-	-	-
SLC2A3	0	genome.wustl.edu	37	12	8086481	8086481	+	Silent	SNP	T	T	G			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	12	8086481	8086481	T	G	SNP	SLC2A3	ENST00000075120	human	ensembl	69_37n	-1	known	silent	c.33	p.I11	0.988	superfamily_MFS_dom_general_subst_transpt,prints_Glc_transpt_3,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804	227	0	0.00	142	51	26.42	-	-	-
SPTAN1	0	genome.wustl.edu	37	9	131371190	131371190	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	9	131371190	131371190	A	C	SNP	SPTAN1	ENST00000358161	human	ensembl	69_37n	+1	known	missense	c.4529	p.Q1510P	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF-hand,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_Ca-bd,prints_Spectrin_alpha_SH3,prints_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694	85	0	0.00	48	8	14.29	-	-	-
TRIM36	0	genome.wustl.edu	37	5	114482989	114482989	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	5	114482989	114482989	C	T	SNP	TRIM36	ENST00000282369	human	ensembl	69_37n	-1	known	missense	c.401	p.R134Q	1.000	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM36	HGNC	ENSG00000152503	173	0	0.00	127	62	32.80	-	-	-
WIPI1	0	genome.wustl.edu	37	17	66424974	66424974	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	17	66424974	66424974	G	-	DEL	WIPI1	ENST00000262139	human	ensembl	69_37n	-1	known	frame_shift_del	c.1069	p.H357fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WIPI1	HGNC	ENSG00000070540	144	0	0.00	129	51	27.87	-	-	-
ZNF439	0	genome.wustl.edu	37	19	11979122	11979122	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A1R5-01A-11D-A14K-09	TCGA-E9-A1R5-10A-01D-A14K-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	a04ba6e9-2bc4-4cab-96d8-0820e0390d84	bda47415-2577-4d09-874a-2a85e999c9cd	19	11979122	11979122	A	T	SNP	ZNF439	ENST00000304030	human	ensembl	69_37n	+1	known	missense	c.1238	p.K413M	0.208	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF439	HGNC	ENSG00000171291	115	1	0.86	65	32	32.99	-	-	-
