Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADAMTS19	0	genome.wustl.edu	37	5	129030517	129030517	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	5	129030517	129030517	C	T	SNP	ADAMTS19	ENST00000274487	human	ensembl	69_37n	+1	known	nonsense	c.2905	p.R969*	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	60	0	0.00	59	23	28.05	-	-	-
ADRA1A	0	genome.wustl.edu	37	8	26722154	26722154	+	Silent	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	8	26722154	26722154	G	A	SNP	ADRA1A	ENST00000380586	human	ensembl	69_37n	-1	known	silent	c.333	p.T111	0.521	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Adrene_rcpt_A1Cs,prints_7TM_GPCR_Rhodpsn,prints_Adrnrgc_rcpt	-	no_errors	ADRA1A	HGNC	ENSG00000120907	38	0	0.00	7	26	78.79	-	-	-
AKAP8L	0	genome.wustl.edu	37	19	15512077	15512077	+	Frame_Shift_Del	DEL	G	G	-			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	19	15512077	15512077	G	-	DEL	AKAP8L	ENST00000397410	human	ensembl	69_37n	-1	known	frame_shift_del	c.700	p.Q234fs	1.000	NULL	pfam_AKAP95	-	no_errors	AKAP8L	HGNC	ENSG00000011243	28	0	0.00	17	3	15.00	-	-	-
AQP7	0	genome.wustl.edu	37	9	33395134	33395135	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	9	33395134	33395135	-	CC	INS	AQP7	ENST00000297988	human	ensembl	69_37n	-1	known	frame_shift_ins	c.86_85	p.L29fs	0.007:0.000	NULL	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_3,tigrfam_Aquaporin	-	no_errors	AQP7	HGNC	ENSG00000165269	89	0	0.00	66	11	14.29	-	-	-
ATP10B	0	genome.wustl.edu	37	5	160033805	160033805	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	5	160033805	160033805	G	A	SNP	ATP10B	ENST00000327245	human	ensembl	69_37n	-1	known	nonsense	c.3127	p.R1043*	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	pfam_ATPase_P-typ_ATPase-assoc-dom,pfam_Dehalogen-like_hydro,superfamily_HAD-like_dom,superfamily_ATPase_cation_domN,prints_ATPase_P-typ_ion-transptr,tigrfam_ATPase_P-typ_Plipid-transl,tigrfam_ATPase_P-typ_ion-transptr	-	no_errors	ATP10B	HGNC	ENSG00000118322	56	0	0.00	42	15	25.86	-	-	-
BOC	0	genome.wustl.edu	37	3	112969456	112969456	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	3	112969456	112969456	G	A	SNP	BOC	ENST00000273395	human	ensembl	69_37n	+1	known	missense	c.152	p.G51D	0.997	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like	-	no_errors	BOC	HGNC	ENSG00000144857	53	0	0.00	67	16	19.28	-	-	-
C1orf35	0	genome.wustl.edu	37	1	228289842	228289843	+	Frame_Shift_Ins	INS	-	-	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	228289842	228289843	-	C	INS	C1orf35	ENST00000272139	human	ensembl	69_37n	-1	known	frame_shift_ins	c.472_471	p.P157fs	0.000:0.000	NULL	pfam_Kinase_phosphorylation_domain	-	no_errors	C1orf35	HGNC	ENSG00000143793	8	0	0.00	4	2	33.33	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16946535	16946535	+	Splice_Site	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	16946535	16946535	T	C	SNP	CROCCP2	ENST00000540383	human	ensembl	69_37n	-1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	16	0	0.00	10	5	33.33	-	-	-
CTTNBP2	0	genome.wustl.edu	37	7	117375356	117375356	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	7	117375356	117375356	G	A	SNP	CTTNBP2	ENST00000160373	human	ensembl	69_37n	-1	known	missense	c.3655	p.R1219C	1.000	NULL	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063	38	0	0.00	49	22	30.99	-	-	-
CYB5R1	0	genome.wustl.edu	37	1	202936357	202936357	+	RNA	SNP	A	A	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	202936357	202936357	A	C	SNP	CYB5R1	ENST00000473599	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYB5R1	HGNC	ENSG00000159348	13	0	0.00	5	6	54.55	-	-	-
DMD	0	genome.wustl.edu	37	X	32366618	32366618	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	X	32366618	32366618	G	T	SNP	DMD	ENST00000357033	human	ensembl	69_37n	-1	known	missense	c.5353	p.Q1785K	1.000	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	111	0	0.00	133	22	14.19	-	-	-
FAM70A	0	genome.wustl.edu	37	X	119421019	119421019	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	X	119421019	119421019	T	C	SNP	FAM70A	ENST00000309720	human	ensembl	69_37n	-1	known	missense	c.413	p.E138G	1.000	NULL	NULL	-	no_errors	FAM70A	HGNC	ENSG00000125355	82	0	0.00	53	23	30.26	-	-	-
FAM75D1	0	genome.wustl.edu	37	9	84607812	84607812	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	9	84607812	84607812	G	T	SNP	FAM75D1	ENST00000344803	human	ensembl	69_37n	+1	known	missense	c.2427	p.M809I	0.000	NULL	NULL	-	no_errors	FAM75D1	HGNC	ENSG00000214929	37	0	0.00	98	13	11.71	-	-	-
FARS2	0	genome.wustl.edu	37	6	5545516	5545516	+	Silent	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	6	5545516	5545516	C	T	SNP	FARS2	ENST00000274680	human	ensembl	69_37n	+1	known	silent	c.1008	p.D336	0.986	pfam_Phenylalanyl-tRNA_Synthase,pfscan_aa-tRNA-synth_II,tigrfam_Phe-tRNA-synth_IIc_mito	pfam_Phenylalanyl-tRNA_Synthase,pfam_PheS_beta_Fdx_antiC-bd,superfamily_PheS_beta_Fdx_antiC-bd,smart_PheS_beta_Fdx_antiC-bd,pfscan_aa-tRNA-synth_II,tigrfam_Phe-tRNA-synth_IIc_mito	-	no_errors	FARS2	HGNC	ENSG00000145982	63	0	0.00	57	25	30.49	-	-	-
FBN2	0	genome.wustl.edu	37	5	127685051	127685051	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	5	127685051	127685051	G	C	SNP	FBN2	ENST00000262464	human	ensembl	69_37n	-1	known	missense	c.2977	p.R993G	1.000	pirsf_Fibrillin,pfam_EGF-like_Ca-bd,superfamily_TB_dom,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom	pirsf_Fibrillin,pfam_EGF-like_Ca-bd,pfam_EGF-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EGF-like,smart_EGF-like_Ca-bd,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	29	0	0.00	42	11	20.75	-	-	-
GNL3L	0	genome.wustl.edu	37	X	54569444	54569444	+	Silent	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	X	54569444	54569444	G	A	SNP	GNL3L	ENST00000336470	human	ensembl	69_37n	+1	known	silent	c.363	p.R121	0.997	NULL	pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,prints_GTP_binding_domain	-	no_errors	GNL3L	HGNC	ENSG00000130119	56	0	0.00	77	40	34.19	-	-	-
GRASP	0	genome.wustl.edu	37	12	52407973	52407973	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	12	52407973	52407973	C	T	SNP	GRASP	ENST00000293662	human	ensembl	69_37n	+1	known	missense	c.670	p.R224W	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRASP	HGNC	ENSG00000161835	64	0	0.00	65	29	30.85	-	-	-
GRIN2C	0	genome.wustl.edu	37	17	72846369	72846369	+	Silent	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	17	72846369	72846369	G	A	SNP	GRIN2C	ENST00000293190	human	ensembl	69_37n	-1	known	silent	c.1467	p.G489	0.856	pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,pfam_NMDAR2_C,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2C	HGNC	ENSG00000161509	24	0	0.00	13	6	31.58	-	-	-
H2BFM	0	genome.wustl.edu	37	X	103294608	103294608	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	X	103294608	103294608	T	C	SNP	H2BFM	ENST00000243297	human	ensembl	69_37n	+1	known	missense	c.374	p.I125T	0.000	NULL	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	H2BFM	HGNC	ENSG00000101812	14	0	0.00	14	9	39.13	-	-	-
HS3ST4	0	genome.wustl.edu	37	16	26147331	26147331	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	16	26147331	26147331	A	C	SNP	HS3ST4	ENST00000331351	human	ensembl	69_37n	+1	known	missense	c.1133	p.K378T	1.000	pfam_Sulfotransferase_dom	pfam_Sulfotransferase_dom	-	no_errors	HS3ST4	HGNC	ENSG00000182601	29	0	0.00	50	11	18.03	-	-	-
IL17RE	0	genome.wustl.edu	37	3	9956194	9956194	+	Silent	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	3	9956194	9956194	T	C	SNP	IL17RE	ENST00000454190	human	ensembl	69_37n	+1	known	silent	c.1332	p.D444	0.000	NULL	NULL	-	no_errors	IL17RE	HGNC	ENSG00000163701	28	0	0.00	20	36	63.16	-	-	-
ITGA3	0	genome.wustl.edu	37	17	48166523	48166523	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	17	48166523	48166523	A	G	SNP	ITGA3	ENST00000007722	human	ensembl	69_37n	+1	novel	missense	c.3095	p.H1032R	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA3	HGNC	ENSG00000005884	43	0	0.00	72	16	18.18	-	-	-
KY	0	genome.wustl.edu	37	3	134323234	134323234	+	Silent	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	3	134323234	134323234	C	T	SNP	KY	ENST00000423778	human	ensembl	69_37n	-1	known	silent	c.1173	p.G391	1.000	NULL	pfam_Transglutaminase-like,smart_Transglutaminase-like	-	no_errors	KY	HGNC	ENSG00000174611	27	0	0.00	8	17	68.00	-	-	-
LCN8	0	genome.wustl.edu	37	9	139650268	139650269	+	RNA	INS	-	-	CA			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	9	139650268	139650269	-	CA	INS	LCN8	ENST00000482893	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.005:0.005	-	-	-	no_errors	LCN8	HGNC	ENSG00000204001	11	0	0.00	2	2	50.00	-	-	-
MAST1	0	genome.wustl.edu	37	19	12962989	12962989	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	19	12962989	12962989	G	A	SNP	MAST1	ENST00000251472	human	ensembl	69_37n	+1	known	missense	c.937	p.G313S	1.000	pfam_MA_Ser/Thr_Kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_cat_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	27	0	0.00	22	10	31.25	-	-	-
MOCS1	0	genome.wustl.edu	37	6	39874865	39874865	+	Silent	SNP	T	T	G			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	6	39874865	39874865	T	G	SNP	MOCS1	ENST00000340692	human	ensembl	69_37n	-1	known	silent	c.1179	p.P393	1.000	NULL	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615	12	0	0.00	17	8	32.00	-	-	-
MRPS27	0	genome.wustl.edu	37	5	71616019	71616019	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	5	71616019	71616019	C	T	SNP	MRPS27	ENST00000513900	human	ensembl	69_37n	-1	known	missense	c.30	p.M10I	0.000	pfam_Ribosomal_S27_mit	pfam_Ribosomal_S27_mit	-	no_errors	MRPS27	HGNC	ENSG00000113048	46	0	0.00	32	11	25.58	-	-	-
NCF2	0	genome.wustl.edu	37	1	183556058	183556058	+	Nonsense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	183556058	183556058	G	A	SNP	NCF2	ENST00000367535	human	ensembl	69_37n	-1	known	nonsense	c.229	p.R77*	0.946	pfam_TPR-1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_SH3_domain,pfam_SH3_2,pfam_TPR-1,pfam_OPR_PB1,superfamily_SH3_domain,smart_TPR_repeat,smart_SH3_domain,smart_OPR_PB1,pfscan_SH3_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_p67phox,prints_SH3_domain	-	no_errors	NCF2	HGNC	ENSG00000116701	49	0	0.00	73	31	29.52	-	-	-
OR52K1	0	genome.wustl.edu	37	11	4510284	4510284	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	11	4510284	4510284	C	T	SNP	OR52K1	ENST00000307632	human	ensembl	69_37n	+1	known	nonsense	c.154	p.Q52*	0.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR52K1	HGNC	ENSG00000196778	111	0	0.00	131	44	25.14	-	-	-
PCDHB8	0	genome.wustl.edu	37	5	140558070	140558070	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	5	140558070	140558070	C	A	SNP	PCDHB8	ENST00000239444	human	ensembl	69_37n	+1	known	missense	c.455	p.A152E	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322	68	0	0.00	41	20	32.79	-	-	-
PDE12	0	genome.wustl.edu	37	3	57542637	57542637	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	3	57542637	57542637	C	-	DEL	PDE12	ENST00000311180	human	ensembl	69_37n	+1	known	frame_shift_del	c.531	p.P178fs	1.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	PDE12	HGNC	ENSG00000174840	26	0	0.00	25	9	26.47	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178916924	178916924	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	3	178916924	178916924	C	T	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.311	p.P104L	1.000	pfam_PI3K_adapt-bd_dom,smart_PI3K_adapt-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	27	0	0.00	19	31	62.00	-	-	-
PKHD1L1	0	genome.wustl.edu	37	8	110527447	110527447	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	8	110527447	110527447	T	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	69_37n	+1	known	missense	c.11602	p.Y3868H	1.000	NULL	pfam_IPT_TIG_rcpt,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT_TIG_rcpt,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	83	0	0.00	371	179	32.55	-	-	-
PLA2G4D	0	genome.wustl.edu	37	15	42374005	42374005	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	15	42374005	42374005	C	T	SNP	PLA2G4D	ENST00000290472	human	ensembl	69_37n	-1	known	missense	c.811	p.A271T	0.260	smart_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_Ca-dep,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,smart_LysoPLipase_cat_dom,pfscan_C2_membr_targeting,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4D	HGNC	ENSG00000159337	53	0	0.00	26	15	36.59	-	-	-
PRRX1	0	genome.wustl.edu	37	1	170695530	170695530	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	170695530	170695530	C	T	SNP	PRRX1	ENST00000239461	human	ensembl	69_37n	+1	known	missense	c.587	p.A196V	1.000	NULL	pfam_Homeodomain,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_OAR_dom,pfscan_Homeodomain	-	no_errors	PRRX1	HGNC	ENSG00000116132	28	0	0.00	21	8	27.59	-	-	-
PTPRD	0	genome.wustl.edu	37	9	8504378	8504378	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	9	8504378	8504378	A	G	SNP	PTPRD	ENST00000356435	human	ensembl	69_37n	-1	known	missense	c.1705	p.S569P	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	145	0	0.00	28	37	56.92	-	-	-
PTPRZ1	0	genome.wustl.edu	37	7	121695126	121695126	+	Silent	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	7	121695126	121695126	C	T	SNP	PTPRZ1	ENST00000393386	human	ensembl	69_37n	+1	known	silent	c.6513	p.I2171	0.999	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-specificity_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	37	0	0.00	41	12	22.64	-	-	-
QSOX1	0	genome.wustl.edu	37	1	180135688	180135688	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	180135688	180135688	T	A	SNP	QSOX1	ENST00000367602	human	ensembl	69_37n	+1	known	missense	c.328	p.C110S	0.986	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Evr1_Alr,pfam_Thioredoxin_domain,superfamily_Evr1_Alr,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX1	HGNC	ENSG00000116260	49	0	0.00	51	11	17.74	-	-	-
RHPN2	0	genome.wustl.edu	37	19	33490500	33490500	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	19	33490500	33490500	C	T	SNP	RHPN2	ENST00000254260	human	ensembl	69_37n	-1	known	missense	c.1217	p.R406Q	0.000	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,superfamily_HR1_rho-bd,superfamily_PDZ,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom	-	no_errors	RHPN2	HGNC	ENSG00000131941	63	0	0.00	43	5	10.42	-	-	-
RPGR	0	genome.wustl.edu	37	X	38146589	38146589	+	Missense_Mutation	SNP	T	T	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	X	38146589	38146589	T	C	SNP	RPGR	ENST00000339363	human	ensembl	69_37n	-1	known	missense	c.2278	p.K760E	0.000	superfamily_Reg_csome_cond/b-lactamase_inh	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	14	0	0.00	2	7	77.78	-	-	-
RYR3	0	genome.wustl.edu	37	15	33872233	33872233	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	15	33872233	33872233	C	A	SNP	RYR3	ENST00000389232	human	ensembl	69_37n	+1	known	missense	c.1325	p.T442N	1.000	pfam_Ca-rel_channel	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	45	0	0.00	22	19	46.34	-	-	-
SECISBP2	0	genome.wustl.edu	37	9	91934622	91934622	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	9	91934622	91934622	A	G	SNP	SECISBP2	ENST00000375807	human	ensembl	69_37n	+1	known	missense	c.92	p.N31S	0.008	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC	ENSG00000187742	87	0	0.00	109	37	25.34	-	-	-
SLC7A9	0	genome.wustl.edu	37	19	33355671	33355671	+	Silent	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	19	33355671	33355671	G	A	SNP	SLC7A9	ENST00000023064	human	ensembl	69_37n	-1	known	silent	c.99	p.I33	0.991	pirsf_AA/rel_permease1	pfam_AA-permease_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A9	HGNC	ENSG00000021488	60	0	0.00	27	17	38.64	-	-	-
SPTA1	0	genome.wustl.edu	37	1	158627369	158627369	+	Missense_Mutation	SNP	G	G	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	158627369	158627369	G	T	SNP	SPTA1	ENST00000368148	human	ensembl	69_37n	-1	known	missense	c.2703	p.F901L	1.000	pfam_Spectrin_repeat	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_HAND_2,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	80	0	0.00	74	19	20.43	-	-	-
STX10	0	genome.wustl.edu	37	19	13255448	13255448	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	19	13255448	13255448	G	C	SNP	STX10	ENST00000587230	human	ensembl	69_37n	-1	known	missense	c.616	p.Q206E	0.993	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin-6_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX10	HGNC	ENSG00000104915	43	0	0.00	40	11	21.15	-	-	-
TRIM49	0	genome.wustl.edu	37	11	89531780	89531780	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	11	89531780	89531780	G	C	SNP	TRIM49	ENST00000329758	human	ensembl	69_37n	-1	known	missense	c.877	p.H293D	0.033	superfamily_ConA-like_lec_gl,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49	HGNC	ENSG00000168930	23	0	0.00	8	4	33.33	-	-	-
TRIP6	0	genome.wustl.edu	37	7	100470878	100470878	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	7	100470878	100470878	G	A	SNP	TRIP6	ENST00000200457	human	ensembl	69_37n	+1	known	missense	c.1384	p.A462T	1.000	pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	TRIP6	HGNC	ENSG00000087077	34	0	0.00	20	6	23.08	-	-	-
TRPC4	0	genome.wustl.edu	37	13	38213437	38213437	+	Splice_Site	SNP	C	C	G			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	13	38213437	38213437	C	G	SNP	TRPC4	ENST00000379681	human	ensembl	69_37n	-1	known	splice_site	c.2095-1	e8-1	1.000	-	-	-	no_errors	TRPC4	HGNC	ENSG00000133107	72	0	0.00	54	71	56.80	-	-	-
TUBGCP3	0	genome.wustl.edu	37	13	113140381	113140381	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	13	113140381	113140381	C	T	SNP	TUBGCP3	ENST00000261965	human	ensembl	69_37n	-1	known	missense	c.2650	p.E884K	1.000	NULL	pfam_Spc97_Spc98	-	no_errors	TUBGCP3	HGNC	ENSG00000126216	43	0	0.00	28	9	24.32	-	-	-
UNC5B	0	genome.wustl.edu	37	10	73044530	73044530	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	10	73044530	73044530	C	A	SNP	UNC5B	ENST00000335350	human	ensembl	69_37n	+1	known	missense	c.358	p.L120I	1.000	smart_Ig_sub	pfam_ZU5,pfam_Ig_I-set,pfam_Death,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like	-	no_errors	UNC5B	HGNC	ENSG00000107731	40	0	0.00	19	14	42.42	-	-	-
USP1	0	genome.wustl.edu	37	1	62910497	62910497	+	Nonsense_Mutation	SNP	C	C	T			TCGA-E9-A1RE-01A-11D-A159-09	TCGA-E9-A1RE-10A-01D-A159-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	4a9c0873-f496-48a4-853c-2b41b2dbaa9e	56e80c27-e4b1-4c17-a104-61ae05c5ce82	1	62910497	62910497	C	T	SNP	USP1	ENST00000339950	human	ensembl	69_37n	+1	known	nonsense	c.646	p.Q216*	1.000	pfam_Peptidase_C19,pfscan_Peptidase_C19	pfam_Peptidase_C19,pfscan_Peptidase_C19	-	no_errors	USP1	HGNC	ENSG00000162607	25	0	0.00	21	7	25.00	-	-	-
