Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABP1	0	genome.wustl.edu	37	7	150557703	150557703	+	Silent	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	7	150557703	150557703	C	T	SNP	ABP1	ENST00000416793	human	ensembl	69_37n	+1	known	silent	c.2028	p.N676	0.986	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	ABP1	HGNC	ENSG00000002726	85	0	0.00	40	11	21.57	-	-	-
AMN1	0	genome.wustl.edu	37	12	31862323	31862323	+	Nonsense_Mutation	SNP	A	A	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	12	31862323	31862323	A	T	SNP	AMN1	ENST00000281471	human	ensembl	69_37n	-1	known	nonsense	c.75	p.Y25*	0.761	NULL	smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	AMN1	HGNC	ENSG00000151743	68	0	0.00	15	10	40.00	-	-	-
APC	0	genome.wustl.edu	37	5	112175450	112175450	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	5	112175450	112175450	T	A	SNP	APC	ENST00000257430	human	ensembl	69_37n	+1	known	missense	c.4159	p.C1387S	1.000	pfam_APC_Cys-rich_rpt	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	50	0	0.00	11	8	42.11	-	-	-
BIRC3	0	genome.wustl.edu	37	11	102195805	102195805	+	Missense_Mutation	SNP	C	C	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	11	102195805	102195805	C	G	SNP	BIRC3	ENST00000263464	human	ensembl	69_37n	+1	known	missense	c.565	p.L189V	0.777	pfam_BIR,smart_BIR,pfscan_BIR	pfam_BIR,pfam_CARD,superfamily_DEATH-like,smart_BIR,smart_CARD,smart_Znf_RING,pfscan_CARD,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC3	HGNC	ENSG00000023445	35	0	0.00	21	9	30.00	-	-	-
C19orf77	0	genome.wustl.edu	37	19	3478950	3478950	+	RNA	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	19	3478950	3478950	G	A	SNP	C19orf77	ENST00000586804	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C19orf77	HGNC	ENSG00000095932	92	0	0.00	29	20	40.82	-	-	-
CADM2	0	genome.wustl.edu	37	3	86010721	86010721	+	Silent	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	3	86010721	86010721	G	A	SNP	CADM2	ENST00000405615	human	ensembl	69_37n	+1	known	silent	c.873	p.T291	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Neurexin-like,pfscan_Ig-like	-	no_errors	CADM2	HGNC	ENSG00000175161	93	0	0.00	38	29	43.28	-	-	-
CBFB	0	genome.wustl.edu	37	16	67070577	67070578	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	67070577	67070578	-	T	INS	CBFB	ENST00000290858	human	ensembl	69_37n	+1	known	frame_shift_ins	c.201_202	p.P69fs	1.000:1.000	pfam_CBF_beta,superfamily_CBF_beta	pfam_CBF_beta,superfamily_CBF_beta	-	no_errors	CBFB	HGNC	ENSG00000067955	96	0	0.00	8	21	72.41	-	-	-
CCBE1	0	genome.wustl.edu	37	18	57115243	57115243	+	Missense_Mutation	SNP	A	A	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	18	57115243	57115243	A	T	SNP	CCBE1	ENST00000398179	human	ensembl	69_37n	-1	known	missense	c.74	p.L25Q	1.000	NULL	pfam_Collagen	-	no_errors	CCBE1	HGNC	ENSG00000183287	84	0	0.00	39	35	47.30	-	-	-
CLTC	0	genome.wustl.edu	37	17	57762432	57762432	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	17	57762432	57762432	A	G	SNP	CLTC	ENST00000269122	human	ensembl	69_37n	+1	known	missense	c.4450	p.I1484V	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTC	HGNC	ENSG00000141367	56	0	0.00	53	23	30.26	-	-	-
DOCK7	0	genome.wustl.edu	37	1	63090858	63090858	+	RNA	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	1	63090858	63090858	C	T	SNP	DOCK7	ENST00000464312	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DOCK7	HGNC	ENSG00000116641	34	0	0.00	16	4	19.05	-	-	-
EPHA4	0	genome.wustl.edu	37	2	222284646	222284646	+	RNA	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	2	222284646	222284646	C	T	SNP	EPHA4	ENST00000469354	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	EPHA4	HGNC	ENSG00000116106	35	0	0.00	14	3	17.65	-	-	-
FAM217A	0	genome.wustl.edu	37	6	4069855	4069857	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	6	4069855	4069857	TCT	-	DEL	FAM217A	ENST00000274673	human	ensembl	69_37n	-1	known	in_frame_del	c.602_600	p.D201in_frame_del	1.000:1.000:0.998	NULL	NULL	-	no_errors	FAM217A	HGNC	ENSG00000145975	42	0	0.00	20	6	23.08	-	-	-
FASTKD5	0	genome.wustl.edu	37	20	3129595	3129595	+	Missense_Mutation	SNP	T	T	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	20	3129595	3129595	T	G	SNP	FASTKD5	ENST00000380266	human	ensembl	69_37n	-1	known	missense	c.122	p.Q41P	0.001	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251	144	0	0.00	66	87	56.86	-	-	-
FOXF1	0	genome.wustl.edu	37	16	86544800	86544800	+	Frame_Shift_Del	DEL	C	C	-			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	86544800	86544800	C	-	DEL	FOXF1	ENST00000262426	human	ensembl	69_37n	+1	known	frame_shift_del	c.625	p.S210fs	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXF1	HGNC	ENSG00000103241	13	0	0.00	4	2	33.33	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23685316	23685317	+	Frame_Shift_Ins	INS	-	-	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	15	23685316	23685317	-	T	INS	GOLGA6L2	ENST00000567107	human	ensembl	69_37n	-1	putative	frame_shift_ins	c.2306_2305	p.A769fs	0.005:0.010	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	23	0	0.00	8	3	27.27	-	-	-
GRIA4	0	genome.wustl.edu	37	11	105842661	105842661	+	Missense_Mutation	SNP	T	T	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	11	105842661	105842661	T	A	SNP	GRIA4	ENST00000282499	human	ensembl	69_37n	+1	known	missense	c.2315	p.V772D	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA4	HGNC	ENSG00000152578	56	0	0.00	20	10	33.33	-	-	-
HNRNPK	0	genome.wustl.edu	37	9	86595498	86595498	+	RNA	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	9	86595498	86595498	G	A	SNP	HNRNPK	ENST00000472778	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	HNRNPK	HGNC	ENSG00000165119	52	0	0.00	19	4	17.39	-	-	-
IGHV3-9	0	genome.wustl.edu	37	14	106552589	106552589	+	Missense_Mutation	SNP	A	A	C			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	14	106552589	106552589	A	C	SNP	IGHV3-9	ENST00000390600	human	ensembl	69_37n	-1	known	missense	c.50	p.V17G	0.880	NULL	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_stop_codon	IGHV3-9	HGNC	ENSG00000211940	63	0	0.00	41	5	10.87	-	-	-
IL33	0	genome.wustl.edu	37	9	6241782	6241782	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	9	6241782	6241782	G	C	SNP	IL33	ENST00000381434	human	ensembl	69_37n	+1	known	missense	c.88	p.G30R	0.048	NULL	NULL	-	no_errors	IL33	HGNC	ENSG00000137033	38	0	0.00	16	5	23.81	-	-	-
ITGAM	0	genome.wustl.edu	37	16	31277441	31277441	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	31277441	31277441	C	T	SNP	ITGAM	ENST00000544665	human	ensembl	69_37n	+1	known	missense	c.400	p.P134S	0.016	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896	84	0	0.00	82	12	12.77	-	-	-
MCM9	0	genome.wustl.edu	37	6	119136278	119136278	+	Silent	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	6	119136278	119136278	G	A	SNP	MCM9	ENST00000316316	human	ensembl	69_37n	-1	known	silent	c.3141	p.S1047	0.002	NULL	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold-like,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM9	HGNC	ENSG00000111877	64	0	0.00	36	10	21.74	-	-	-
NDNF	0	genome.wustl.edu	37	4	121961158	121961158	+	Silent	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	4	121961158	121961158	C	T	SNP	NDNF	ENST00000379692	human	ensembl	69_37n	-1	known	silent	c.240	p.T80	0.013	NULL	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	NDNF	HGNC	ENSG00000173376	64	0	0.00	36	10	21.74	-	-	-
OR52E8	0	genome.wustl.edu	37	11	5878438	5878438	+	Silent	SNP	C	C	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	11	5878438	5878438	C	A	SNP	OR52E8	ENST00000537935	human	ensembl	69_37n	-1	known	silent	c.495	p.L165	0.000	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269	54	0	0.00	19	23	54.76	-	-	-
PGF	0	genome.wustl.edu	37	14	75409429	75409429	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	14	75409429	75409429	C	T	SNP	PGF	ENST00000405431	human	ensembl	69_37n	-1	known	missense	c.646	p.D216N	0.000	NULL	pfam_PD_growth_factor,smart_PD_growth_factor,pfscan_PD_growth_factor	-	no_errors	PGF	HGNC	ENSG00000119630	42	0	0.00	10	9	47.37	-	-	-
PRKCA	0	genome.wustl.edu	37	17	64800107	64800107	+	Silent	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	17	64800107	64800107	G	A	SNP	PRKCA	ENST00000413366	human	ensembl	69_37n	+1	known	silent	c.1971	p.S657	0.667	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_Ca-dep,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_Ca-dep,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_membr_targeting,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_cat_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCA	HGNC	ENSG00000154229	66	0	0.00	69	8	10.39	-	-	-
PSORS1C1	0	genome.wustl.edu	37	6	31083664	31083664	+	RNA	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	6	31083664	31083664	G	A	SNP	PSORS1C1	ENST00000467107	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PSORS1C1	HGNC	ENSG00000204540	87	0	0.00	40	5	11.11	-	-	-
RYR2	0	genome.wustl.edu	37	1	237924277	237924277	+	Nonsense_Mutation	SNP	G	G	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	1	237924277	237924277	G	T	SNP	RYR2	ENST00000360064	human	ensembl	69_37n	+1	known	nonsense	c.11443	p.E3815*	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR,superfamily_ConA-like_lec_gl,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_HAND_2,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	81	0	0.00	83	20	19.42	-	-	-
SECISBP2L	0	genome.wustl.edu	37	15	49292062	49292062	+	Missense_Mutation	SNP	C	C	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	15	49292062	49292062	C	A	SNP	SECISBP2L	ENST00000559471	human	ensembl	69_37n	-1	known	missense	c.2371	p.V791L	1.000	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2L	HGNC	ENSG00000138593	100	0	0.00	48	20	29.41	-	-	-
SLC5A2	0	genome.wustl.edu	37	16	31498700	31498700	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	31498700	31498700	G	A	SNP	SLC5A2	ENST00000330498	human	ensembl	69_37n	+1	known	missense	c.634	p.A212T	0.955	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A2	HGNC	ENSG00000140675	122	0	0.00	49	54	52.43	-	-	-
SPSB3	0	genome.wustl.edu	37	16	1827832	1827832	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	1827832	1827832	G	A	SNP	SPSB3	ENST00000301717	human	ensembl	69_37n	-1	known	missense	c.637	p.R213W	0.239	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032	122	0	0.00	95	17	15.18	-	-	-
SRSF11	0	genome.wustl.edu	37	1	70696867	70696867	+	RNA	DEL	T	T	-			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	1	70696867	70696867	T	-	DEL	SRSF11	ENST00000463116	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SRSF11	HGNC	ENSG00000116754	61	0	0.00	16	2	11.11	-	-	-
SSPO	0	genome.wustl.edu	37	7	149482039	149482039	+	RNA	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	7	149482039	149482039	G	A	SNP	SSPO	ENST00000262089	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	66	0	0.00	23	7	23.33	-	-	-
STAG3L4	0	genome.wustl.edu	37	7	66767682	66767682	+	RNA	SNP	C	C	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	7	66767682	66767682	C	G	SNP	STAG3L4	ENST00000416602	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	119	0	0.00	27	28	50.91	-	-	-
TGM5	0	genome.wustl.edu	37	15	43525787	43525787	+	Frame_Shift_Del	DEL	T	T	-			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	15	43525787	43525787	T	-	DEL	TGM5	ENST00000220420	human	ensembl	69_37n	-1	known	frame_shift_del	c.1974	p.G659fs	1.000	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM5	HGNC	ENSG00000104055	59	0	0.00	18	2	10.00	-	-	-
TLR10	0	genome.wustl.edu	37	4	38775165	38775165	+	Missense_Mutation	SNP	C	C	T			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	4	38775165	38775165	C	T	SNP	TLR10	ENST00000308973	human	ensembl	69_37n	-1	known	missense	c.2047	p.V683I	0.901	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR10	HGNC	ENSG00000174123	91	0	0.00	56	35	38.04	-	-	-
TMEM106A-AS1	0	genome.wustl.edu	37	17	41375597	41375597	+	RNA	SNP	A	A	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	17	41375597	41375597	A	G	SNP	TMEM106A-AS1	ENST00000427995	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM106A-AS1	HGNC	ENSG00000236383	42	0	0.00	35	4	10.26	-	-	-
TRIO	0	genome.wustl.edu	37	5	14358426	14358426	+	Missense_Mutation	SNP	A	A	G			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	5	14358426	14358426	A	G	SNP	TRIO	ENST00000344204	human	ensembl	69_37n	+1	known	missense	c.2186	p.K729R	1.000	smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_cat_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	100	0	0.00	48	19	28.36	-	-	-
ZC3HAV1	0	genome.wustl.edu	37	7	138764884	138764884	+	Missense_Mutation	SNP	G	G	A			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	7	138764884	138764884	G	A	SNP	ZC3HAV1	ENST00000242351	human	ensembl	69_37n	-1	known	missense	c.803	p.A268V	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939	57	0	0.00	18	5	21.74	-	-	-
ZNF469	0	genome.wustl.edu	37	16	88501034	88501034	+	Missense_Mutation	SNP	G	G	C			TCGA-E9-A5UP-01A-11D-A28B-09	TCGA-E9-A5UP-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	0d061284-08ba-40a8-b786-cb5dd38568ae	ea5a960d-e0cb-4371-9ea6-7b93ddfe4275	16	88501034	88501034	G	C	SNP	ZNF469	ENST00000437464	human	ensembl	69_37n	+1	known	missense	c.7072	p.G2358R	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	113	1	0.88	45	6	11.76	-	-	-
