Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ADNP2	0	genome.wustl.edu	37	18	77895478	77895478	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	18	77895478	77895478	G	C	SNP	ADNP2	ENST00000262198	human	ensembl	69_37n	+1	known	missense	c.2182	p.E728Q	0.819	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeodomain,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544	66	0	0.00	27	4	12.90	-	-	-
ATM	0	genome.wustl.edu	37	11	108114711	108114711	+	Silent	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	108114711	108114711	G	C	SNP	ATM	ENST00000278616	human	ensembl	69_37n	+1	known	silent	c.528	p.L176	0.996	NULL	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	41	0	0.00	32	5	13.51	-	-	-
C11orf24	0	genome.wustl.edu	37	11	68029901	68029901	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	68029901	68029901	G	C	SNP	C11orf24	ENST00000304271	human	ensembl	69_37n	-1	known	missense	c.562	p.L188V	0.000	NULL	NULL	-	no_errors	C11orf24	HGNC	ENSG00000171067	92	0	0.00	80	10	10.87	-	-	-
C11orf24	0	genome.wustl.edu	37	11	68029945	68029945	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	68029945	68029945	G	A	SNP	C11orf24	ENST00000304271	human	ensembl	69_37n	-1	known	missense	c.518	p.S173F	0.000	NULL	NULL	-	no_errors	C11orf24	HGNC	ENSG00000171067	89	0	0.00	77	11	12.50	-	-	-
C12orf23	0	genome.wustl.edu	37	12	107360901	107360901	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	12	107360901	107360901	C	T	SNP	C12orf23	ENST00000280756	human	ensembl	69_37n	+1	known	nonsense	c.7	p.Q3*	1.000	NULL	NULL	-	no_errors	C12orf23	HGNC	ENSG00000151135	61	0	0.00	44	15	25.42	-	-	-
CCDC125	0	genome.wustl.edu	37	5	68606974	68606974	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	5	68606974	68606974	C	G	SNP	CCDC125	ENST00000396496	human	ensembl	69_37n	-1	known	missense	c.424	p.E142Q	1.000	NULL	NULL	-	no_errors	CCDC125	HGNC	ENSG00000183323	66	0	0.00	55	9	14.06	-	-	-
CCDC86	0	genome.wustl.edu	37	11	60609811	60609811	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	60609811	60609811	C	T	SNP	CCDC86	ENST00000535217	human	ensembl	69_37n	+1	known	missense	c.194	p.S65F	0.001	NULL	NULL	-	no_start_codon:no_stop_codon:bad_bp_length_for_coding_region	CCDC86	HGNC	ENSG00000110104	66	0	0.00	42	9	17.65	-	-	-
CDH1	0	genome.wustl.edu	37	16	68857527	68857530	+	Splice_Site	DEL	TAAG	TAAG	-			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	TAAG	TAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	68857527	68857530	TAAG	-	DEL	CDH1	ENST00000261769	human	ensembl	69_37n	+1	known	splice_site_del	c.2164+4_2164+1	e14-1	0.843:0.380:0.737:1.000	-	-	-	no_errors	CDH1	HGNC	ENSG00000039068	35	0	0.00	21	6	22.22	-	-	-
CDO1	0	genome.wustl.edu	37	5	115151972	115151972	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	5	115151972	115151972	C	G	SNP	CDO1	ENST00000250535	human	ensembl	69_37n	-1	known	missense	c.123	p.E41D	1.000	pfam_Cys_dOase_I,superfamily_RmlC_Cupin	pfam_Cys_dOase_I,pfam_Cysteamine_dioxygenase,superfamily_RmlC_Cupin	-	no_errors	CDO1	HGNC	ENSG00000129596	39	0	0.00	26	4	13.33	-	-	-
CECR2	0	genome.wustl.edu	37	22	18022655	18022655	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	22	18022655	18022655	G	A	SNP	CECR2	ENST00000400573	human	ensembl	69_37n	+1	novel	silent	c.2757	p.P919	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	42	0	0.00	31	6	16.22	-	-	-
CELF4	0	genome.wustl.edu	37	18	34839144	34839144	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	18	34839144	34839144	C	A	SNP	CELF4	ENST00000361795	human	ensembl	69_37n	-1	known	missense	c.1333	p.G445C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489	30	0	0.00	16	5	23.81	-	-	-
CEP350	0	genome.wustl.edu	37	1	179991935	179991935	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	179991935	179991935	C	T	SNP	CEP350	ENST00000367607	human	ensembl	69_37n	+1	known	missense	c.3338	p.S1113F	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	59	0	0.00	24	8	25.00	-	-	-
COPB1	0	genome.wustl.edu	37	11	14507916	14507916	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	14507916	14507916	G	C	SNP	COPB1	ENST00000249923	human	ensembl	69_37n	-1	known	missense	c.834	p.I278M	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Coatomer_bsu	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Coatomer_bsu	-	no_errors	COPB1	HGNC	ENSG00000129083	39	0	0.00	46	6	11.54	-	-	-
CROCC	0	genome.wustl.edu	37	1	17275597	17275597	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	17275597	17275597	C	T	SNP	CROCC	ENST00000488646	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CROCC	HGNC	ENSG00000058453	29	0	0.00	27	4	12.90	-	-	-
CROCCP2	0	genome.wustl.edu	37	1	16955075	16955075	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	16955075	16955075	C	T	SNP	CROCCP2	ENST00000412962	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	144	0	0.00	123	14	10.22	-	-	-
DLG2	0	genome.wustl.edu	37	11	83877976	83877976	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	83877976	83877976	C	T	SNP	DLG2	ENST00000524941	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DLG2	HGNC	ENSG00000150672	72	0	0.00	48	13	21.31	-	-	-
DNASE2B	0	genome.wustl.edu	37	1	84867704	84867704	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	84867704	84867704	C	A	SNP	DNASE2B	ENST00000370665	human	ensembl	69_37n	+1	known	missense	c.246	p.D82E	0.437	pfam_DNase_II	pfam_DNase_II	-	no_errors	DNASE2B	HGNC	ENSG00000137976	35	0	0.00	38	8	17.39	-	-	-
DOCK1	0	genome.wustl.edu	37	10	129178358	129178358	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	10	129178358	129178358	G	C	SNP	DOCK1	ENST00000280333	human	ensembl	69_37n	+1	known	missense	c.3625	p.E1209Q	1.000	superfamily_ARM-type_fold	pfam_DOCK,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	31	0	0.00	14	4	22.22	-	-	-
DOCK5	0	genome.wustl.edu	37	8	25198459	25198459	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	8	25198459	25198459	C	A	SNP	DOCK5	ENST00000276440	human	ensembl	69_37n	+1	known	missense	c.2394	p.F798L	1.000	superfamily_ARM-type_fold	pfam_DOCK,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459	65	0	0.00	52	7	11.86	-	-	-
EIF2C2	0	genome.wustl.edu	37	8	141551357	141551357	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	8	141551357	141551357	C	T	SNP	EIF2C2	ENST00000220592	human	ensembl	69_37n	-1	known	missense	c.1940	p.R647H	0.998	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	EIF2C2	HGNC	ENSG00000123908	44	0	0.00	38	8	17.39	-	-	-
EIF4ENIF1	0	genome.wustl.edu	37	22	31858942	31858942	+	Nonsense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	22	31858942	31858942	G	A	SNP	EIF4ENIF1	ENST00000330125	human	ensembl	69_37n	-1	known	nonsense	c.763	p.R255*	1.000	pfam_eIF4E_transporter	pfam_eIF4E_transporter	-	no_errors	EIF4ENIF1	HGNC	ENSG00000184708	63	0	0.00	53	13	19.40	-	-	-
ENSG00000229702	0	genome.wustl.edu	37	X	129629119	129629119	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	X	129629119	129629119	C	T	SNP	ENSG00000229702	ENST00000458525	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-274L7.1	Clone_based_vega_gene	ENSG00000229702	40	0	0.00	42	6	12.50	-	-	-
ENSG00000248710	0	genome.wustl.edu	37	3	159997088	159997088	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	159997088	159997088	C	T	SNP	ENSG00000248710	ENST00000483754	human	ensembl	69_37n	-1	known	missense	c.2242	p.D748N	1.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RP11-432B6.3	Clone_based_vega_gene	ENSG00000248710	38	0	0.00	22	8	26.67	-	-	-
FAM127A	0	genome.wustl.edu	37	X	134166665	134166665	+	Silent	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	X	134166665	134166665	C	T	SNP	FAM127A	ENST00000257013	human	ensembl	69_37n	+1	novel	silent	c.252	p.I84	0.980	NULL	NULL	-	no_errors	FAM127A	HGNC	ENSG00000134590	121	0	0.00	68	8	10.53	-	-	-
FAM47C	0	genome.wustl.edu	37	X	37026995	37026995	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	X	37026995	37026995	C	T	SNP	FAM47C	ENST00000358047	human	ensembl	69_37n	+1	known	missense	c.512	p.T171I	0.000	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173	72	0	0.00	52	20	27.78	-	-	-
FAT2	0	genome.wustl.edu	37	5	150911490	150911490	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	5	150911490	150911490	C	T	SNP	FAT2	ENST00000261800	human	ensembl	69_37n	-1	known	missense	c.9469	p.E3157K	0.972	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd,smart_EGF-like,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	59	0	0.00	44	18	29.03	-	-	-
FMO4	0	genome.wustl.edu	37	1	171303694	171303694	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	171303694	171303694	G	A	SNP	FMO4	ENST00000367749	human	ensembl	69_37n	+1	known	silent	c.972	p.V324	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_4,prints_Flavin_mOase_1,prints_Flavin_mOase_3	-	no_errors	FMO4	HGNC	ENSG00000076258	61	0	0.00	19	14	42.42	-	-	-
FREM2	0	genome.wustl.edu	37	13	39261869	39261869	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	13	39261869	39261869	G	A	SNP	FREM2	ENST00000280481	human	ensembl	69_37n	+1	known	missense	c.388	p.D130N	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	77	0	0.00	52	7	11.86	-	-	-
GBP6	0	genome.wustl.edu	37	1	89847524	89847524	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	89847524	89847524	G	C	SNP	GBP6	ENST00000370456	human	ensembl	69_37n	+1	known	missense	c.1143	p.K381N	0.384	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	-	no_errors	GBP6	HGNC	ENSG00000183347	37	0	0.00	41	9	18.00	-	-	-
GDAP1L1	0	genome.wustl.edu	37	20	42876092	42876092	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	20	42876092	42876092	G	T	SNP	GDAP1L1	ENST00000342560	human	ensembl	69_37n	+1	known	missense	c.118	p.A40S	1.000	superfamily_Thioredoxin-like_fold	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GDAP1L1	HGNC	ENSG00000124194	109	1	0.89	103	14	11.97	-	-	-
GPS2	0	genome.wustl.edu	37	17	7218277	7218277	+	Splice_Site	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	17	7218277	7218277	C	G	SNP	GPS2	ENST00000380728	human	ensembl	69_37n	-1	known	splice_site	c.94+1	e1+1	1.000	-	-	-	no_errors	GPS2	HGNC	ENSG00000132522	131	0	0.00	67	30	30.93	-	-	-
GTF3C3	0	genome.wustl.edu	37	2	197654048	197654048	+	Nonsense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	2	197654048	197654048	G	C	SNP	GTF3C3	ENST00000263956	human	ensembl	69_37n	-1	known	nonsense	c.773	p.S258*	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041	41	0	0.00	41	6	12.77	-	-	-
GUCA2B	0	genome.wustl.edu	37	1	42619172	42619172	+	Silent	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	42619172	42619172	C	G	SNP	GUCA2B	ENST00000372581	human	ensembl	69_37n	+1	known	silent	c.51	p.L17	0.331	pfam_Guanylin,pirsf_Guanylin,prints_Guanylin	pfam_Guanylin,superfamily_Guanylin,pirsf_Guanylin,prints_Guanylin	-	no_errors	GUCA2B	HGNC	ENSG00000044012	81	0	0.00	46	17	26.98	-	-	-
HEATR8	0	genome.wustl.edu	37	1	55144987	55144987	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	55144987	55144987	G	A	SNP	HEATR8	ENST00000421030	human	ensembl	69_37n	+1	known	missense	c.2101	p.A701T	0.898	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR8	HGNC	ENSG00000184313	55	0	0.00	39	10	20.41	-	-	-
HMGB1P5	0	genome.wustl.edu	37	3	22423998	22423998	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	22423998	22423998	C	T	SNP	HMGB1P5	ENST00000451497	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967	24	0	0.00	12	3	20.00	-	-	-
HTR1A	0	genome.wustl.edu	37	5	63256619	63256619	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	5	63256619	63256619	C	T	SNP	HTR1A	ENST00000323865	human	ensembl	69_37n	-1	known	missense	c.928	p.E310K	0.998	pfam_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT1A_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt,prints_NPY_rcpt	-	no_errors	HTR1A	HGNC	ENSG00000178394	29	0	0.00	19	6	24.00	-	-	-
HTR1D	0	genome.wustl.edu	37	1	23520084	23520084	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	23520084	23520084	G	A	SNP	HTR1D	ENST00000314113	human	ensembl	69_37n	-1	known	missense	c.629	p.S210L	0.682	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_7TM_GPCR_Rhodpsn,prints_5HT1D_rcpt,prints_5HT_rcpt	-	no_errors	HTR1D	HGNC	ENSG00000179546	55	0	0.00	42	5	10.64	-	-	-
HTR2C	0	genome.wustl.edu	37	X	114082707	114082707	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	X	114082707	114082707	G	A	SNP	HTR2C	ENST00000276198	human	ensembl	69_37n	+1	known	missense	c.491	p.R164H	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_5HT2C_rcpt,prints_7TM_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR2C	HGNC	ENSG00000147246	59	0	0.00	44	8	15.38	-	-	-
IGF1R	0	genome.wustl.edu	37	15	99440122	99440122	+	Missense_Mutation	SNP	A	A	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	15	99440122	99440122	A	T	SNP	IGF1R	ENST00000268035	human	ensembl	69_37n	+1	known	missense	c.1090	p.I364F	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_cat_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_cat_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443	34	0	0.00	38	6	13.64	-	-	-
IL18	0	genome.wustl.edu	37	11	112025729	112025729	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	112025729	112025729	C	T	SNP	IL18	ENST00000280357	human	ensembl	69_37n	-1	known	missense	c.48	p.M16I	0.998	pirsf_Interleukin_18	pfam_Interleukin_1,superfamily_Cytokine_IL1-like,pirsf_Interleukin_18,prints_Interleukin_18	-	no_errors	IL18	HGNC	ENSG00000150782	63	0	0.00	60	7	10.45	-	-	-
KCNJ11	0	genome.wustl.edu	37	11	17408790	17408790	+	Silent	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	11	17408790	17408790	G	T	SNP	KCNJ11	ENST00000339994	human	ensembl	69_37n	-1	known	silent	c.849	p.I283	1.000	pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2	pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir_Cr2,prints_K_chnl_inward-rec_Kir6.2	-	no_errors	KCNJ11	HGNC	ENSG00000187486	32	0	0.00	40	5	11.11	-	-	-
KDM5B	0	genome.wustl.edu	37	1	202700129	202700129	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	202700129	202700129	C	T	SNP	KDM5B	ENST00000367265	human	ensembl	69_37n	-1	known	missense	c.4084	p.E1362K	1.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139	50	0	0.00	21	6	22.22	-	-	-
KIAA0430	0	genome.wustl.edu	37	16	15698049	15698049	+	Silent	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	15698049	15698049	C	T	SNP	KIAA0430	ENST00000396368	human	ensembl	69_37n	-1	known	silent	c.4389	p.L1463	1.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	50	0	0.00	47	9	16.07	-	-	-
LCT	0	genome.wustl.edu	37	2	136594528	136594528	+	Missense_Mutation	SNP	A	A	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	2	136594528	136594528	A	G	SNP	LCT	ENST00000264162	human	ensembl	69_37n	-1	known	missense	c.212	p.F71S	0.122	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	49	0	0.00	33	7	17.50	-	-	-
LNX1	0	genome.wustl.edu	37	4	54373554	54373554	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	54373554	54373554	C	G	SNP	LNX1	ENST00000263925	human	ensembl	69_37n	-1	known	missense	c.705	p.K235N	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	LNX1	HGNC	ENSG00000072201	50	0	0.00	27	4	12.90	-	-	-
LRIF1	0	genome.wustl.edu	37	1	111506249	111506249	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	111506249	111506249	G	A	SNP	LRIF1	ENST00000369763	human	ensembl	69_37n	-1	known	missense	c.62	p.S21L	1.000	NULL	NULL	-	no_errors	LRIF1	HGNC	ENSG00000121931	42	0	0.00	30	6	16.67	-	-	-
MAGEE1	0	genome.wustl.edu	37	X	75648839	75648839	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	X	75648839	75648839	G	A	SNP	MAGEE1	ENST00000361470	human	ensembl	69_37n	+1	known	silent	c.516	p.T172	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	26	0	0.00	15	5	25.00	-	-	-
MDN1	0	genome.wustl.edu	37	6	90383950	90383950	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	6	90383950	90383950	G	A	SNP	MDN1	ENST00000369393	human	ensembl	69_37n	-1	known	missense	c.13120	p.R4374W	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	30	0	0.00	8	9	52.94	-	-	-
MEIOB	0	genome.wustl.edu	37	16	1891885	1891885	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	1891885	1891885	G	A	SNP	MEIOB	ENST00000325962	human	ensembl	69_37n	-1	known	missense	c.970	p.L324F	0.990	superfamily_NA-bd_OB-fold-like	superfamily_NA-bd_OB-fold-like	-	no_errors	MEIOB	HGNC	ENSG00000162039	55	0	0.00	50	11	18.03	-	-	-
MFAP3L	0	genome.wustl.edu	37	4	170913069	170913069	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	170913069	170913069	G	A	SNP	MFAP3L	ENST00000361618	human	ensembl	69_37n	-1	known	silent	c.690	p.F230	0.994	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	MFAP3L	HGNC	ENSG00000198948	51	0	0.00	34	13	27.66	-	-	-
MIB1	0	genome.wustl.edu	37	18	19438554	19438554	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	18	19438554	19438554	G	A	SNP	MIB1	ENST00000261537	human	ensembl	69_37n	+1	known	missense	c.2827	p.V943I	1.000	NULL	pfam_Ankyrin_rpt,pfam_Mib_Herc2,pfam_Znf_ZZ,superfamily_Ankyrin_rpt-contain_dom,smart_Znf_ZZ,smart_Ankyrin_rpt,smart_Znf_RING,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_RING,pfscan_Znf_ZZ	-	no_errors	MIB1	HGNC	ENSG00000101752	35	0	0.00	30	4	11.76	-	-	-
MICAL3	0	genome.wustl.edu	37	22	18301084	18301084	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	22	18301084	18301084	G	A	SNP	MICAL3	ENST00000441493	human	ensembl	69_37n	-1	known	missense	c.4343	p.S1448L	0.999	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	31	0	0.00	18	4	18.18	-	-	-
MRM1	0	genome.wustl.edu	37	17	34958632	34958632	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	17	34958632	34958632	G	C	SNP	MRM1	ENST00000250156	human	ensembl	69_37n	+1	known	missense	c.393	p.W131C	0.017	tigrfam_rRNA_MeTrfase_TrmH	pfam_SpoU_MeTrfase,pfam_SpoU_subst-bd,smart_SpoU_subst-bd,tigrfam_rRNA_MeTrfase_TrmH	-	no_errors	MRM1	HGNC	ENSG00000129282	47	0	0.00	39	5	11.36	-	-	-
MYH7	0	genome.wustl.edu	37	14	23886162	23886162	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	14	23886162	23886162	C	T	SNP	MYH7	ENST00000355349	human	ensembl	69_37n	-1	known	missense	c.4559	p.G1520E	0.968	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	31	0	0.00	24	5	17.24	-	-	-
MYH7	0	genome.wustl.edu	37	14	23895175	23895175	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	14	23895175	23895175	C	G	SNP	MYH7	ENST00000355349	human	ensembl	69_37n	-1	known	missense	c.2160	p.Q720H	1.000	pfam_Myosin_head_motor_dom,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	51	0	0.00	63	9	12.50	-	-	-
NBPF22P	0	genome.wustl.edu	37	5	85586679	85586679	+	RNA	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	5	85586679	85586679	G	C	SNP	NBPF22P	ENST00000590707	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	NBPF22P	HGNC	ENSG00000205449	62	0	0.00	52	9	14.75	-	-	-
NFIA	0	genome.wustl.edu	37	1	61547540	61547541	+	RNA	INS	-	-	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	61547540	61547541	-	T	INS	NFIA	ENST00000479364	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	NFIA	HGNC	ENSG00000162599	61	0	0.00	42	17	28.81	-	-	-
NKTR	0	genome.wustl.edu	37	3	42680623	42680623	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	42680623	42680623	G	C	SNP	NKTR	ENST00000232978	human	ensembl	69_37n	+1	known	missense	c.3427	p.E1143Q	0.930	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857	40	0	0.00	20	3	13.04	-	-	-
NKX2-3	0	genome.wustl.edu	37	10	101292921	101292921	+	Silent	SNP	T	T	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	10	101292921	101292921	T	A	SNP	NKX2-3	ENST00000344586	human	ensembl	69_37n	+1	known	silent	c.33	p.P11	1.000	NULL	pfam_Homeodomain,superfamily_Homeodomain-like,smart_Homeodomain,pfscan_Homeodomain,prints_Homeobox_metazoa	-	no_errors	NKX2-3	HGNC	ENSG00000119919	82	0	0.00	59	7	10.61	-	-	-
NSFL1C	0	genome.wustl.edu	37	20	1433679	1433679	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	20	1433679	1433679	C	T	SNP	NSFL1C	ENST00000350991	human	ensembl	69_37n	-1	known	missense	c.650	p.R217K	1.000	pfam_SEP_domain,superfamily_SEP_domain,smart_SEP_domain	pfam_SEP_domain,pfam_UBX,superfamily_SEP_domain,superfamily_UBA-like,smart_SEP_domain,smart_UBX,pfscan_UBX	-	no_errors	NSFL1C	HGNC	ENSG00000088833	27	0	0.00	20	5	20.00	-	-	-
NUDT15	0	genome.wustl.edu	37	13	48611981	48611981	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	13	48611981	48611981	G	T	SNP	NUDT15	ENST00000258662	human	ensembl	69_37n	+1	known	missense	c.99	p.K33N	1.000	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT15	HGNC	ENSG00000136159	82	0	0.00	60	8	11.76	-	-	-
NUP188	0	genome.wustl.edu	37	9	131762022	131762022	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	9	131762022	131762022	G	C	SNP	NUP188	ENST00000372577	human	ensembl	69_37n	+1	known	missense	c.3781	p.D1261H	1.000	NULL	pfam_Nucleoporin_Nup188,superfamily_ARM-type_fold	-	no_errors	NUP188	HGNC	ENSG00000095319	68	0	0.00	50	10	16.39	-	-	-
OLFML2B	0	genome.wustl.edu	37	1	161953686	161953686	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	161953686	161953686	C	T	SNP	OLFML2B	ENST00000294794	human	ensembl	69_37n	-1	known	missense	c.2032	p.V678I	1.000	pfam_Olfac-like,superfamily_NA-bd_OB-fold-like,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	90	0	0.00	74	13	14.94	-	-	-
OTOF	0	genome.wustl.edu	37	2	26693475	26693475	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	2	26693475	26693475	C	T	SNP	OTOF	ENST00000272371	human	ensembl	69_37n	-1	known	missense	c.4009	p.D1337N	1.000	NULL	pfam_C2_Ca-dep,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_C2_Ca-dep,pfscan_C2_membr_targeting	-	no_errors	OTOF	HGNC	ENSG00000115155	27	0	0.00	18	4	18.18	-	-	-
PI4K2B	0	genome.wustl.edu	37	4	25278651	25278651	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	25278651	25278651	C	T	SNP	PI4K2B	ENST00000264864	human	ensembl	69_37n	+1	known	nonsense	c.1288	p.Q430*	1.000	pfam_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom	-	no_errors	PI4K2B	HGNC	ENSG00000038210	48	0	0.00	27	9	25.00	-	-	-
PIGQ	0	genome.wustl.edu	37	16	628900	628900	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	628900	628900	C	T	SNP	PIGQ	ENST00000420990	human	ensembl	69_37n	+1	known	missense	c.217	p.H73Y	1.000	pfam_GlcNAc_Gpi1	pfam_GlcNAc_Gpi1	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PIGQ	HGNC	ENSG00000007541	87	0	0.00	52	7	11.67	-	-	-
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	69_37n	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_Ca/lipid-bd_dom_CaLB,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	46	0	0.00	42	13	23.64	-	-	-
PKMYT1	0	genome.wustl.edu	37	16	3019901	3019901	+	RNA	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	3019901	3019901	G	A	SNP	PKMYT1	ENST00000571102	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PKMYT1	HGNC	ENSG00000127564	11	0	0.00	8	4	33.33	-	-	-
PLEKHG2	0	genome.wustl.edu	37	19	39914915	39914915	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	39914915	39914915	G	A	SNP	PLEKHG2	ENST00000409794	human	ensembl	69_37n	+1	known	missense	c.3142	p.E1048K	0.382	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG2	HGNC	ENSG00000090924	65	0	0.00	35	4	10.26	-	-	-
PLEKHH1	0	genome.wustl.edu	37	14	68029173	68029173	+	Silent	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	14	68029173	68029173	C	T	SNP	PLEKHH1	ENST00000329153	human	ensembl	69_37n	+1	known	silent	c.825	p.F275	0.014	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690	48	0	0.00	39	8	17.02	-	-	-
PNKP	0	genome.wustl.edu	37	19	50367447	50367447	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	50367447	50367447	C	T	SNP	PNKP	ENST00000322344	human	ensembl	69_37n	-1	known	missense	c.625	p.E209K	0.001	pfam_PNK3P,superfamily_HAD-like_dom,tigrfam_PNK_3Pase_met,tigrfam_Polynucleotide_phosphatase,tigrfam_HAD-SF_hydro_IIIA	pfam_PNK3P,superfamily_HAD-like_dom,superfamily_SMAD_FHA_domain,tigrfam_PNK_3Pase_met,tigrfam_Polynucleotide_phosphatase,tigrfam_HAD-SF_hydro_IIIA	-	no_errors	PNKP	HGNC	ENSG00000039650	42	0	0.00	27	11	28.95	-	-	-
POLR3C	0	genome.wustl.edu	37	1	145601595	145601595	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	145601595	145601595	G	T	SNP	POLR3C	ENST00000334163	human	ensembl	69_37n	-1	known	missense	c.811	p.L271I	1.000	pfam_RNA_pol_III_Rpc82_C	pfam_RNA_pol_III_Rpc82_C,pfam_RNA_pol_III_RPC82-rel_HTH	-	no_errors	POLR3C	HGNC	ENSG00000186141	29	0	0.00	26	4	13.33	-	-	-
POU4F2	0	genome.wustl.edu	37	4	147561653	147561653	+	Missense_Mutation	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	147561653	147561653	C	G	SNP	POU4F2	ENST00000281321	human	ensembl	69_37n	+1	known	missense	c.923	p.S308C	0.996	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeodomain,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeodomain,pfscan_Homeodomain,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615	58	0	0.00	41	5	10.87	-	-	-
PPFIA3	0	genome.wustl.edu	37	19	49644726	49644726	+	Silent	SNP	C	C	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	49644726	49644726	C	A	SNP	PPFIA3	ENST00000334186	human	ensembl	69_37n	+1	known	silent	c.2418	p.A806	0.999	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA3	HGNC	ENSG00000177380	31	0	0.00	18	4	18.18	-	-	-
PTPRH	0	genome.wustl.edu	37	19	55718603	55718603	+	RNA	SNP	C	C	G			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	55718603	55718603	C	G	SNP	PTPRH	ENST00000586852	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTPRH	HGNC	ENSG00000080031	82	0	0.00	50	16	24.24	-	-	-
RHOQ	0	genome.wustl.edu	37	2	46803734	46803734	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	2	46803734	46803734	G	T	SNP	RHOQ	ENST00000238738	human	ensembl	69_37n	+1	known	missense	c.401	p.R134I	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOQ	HGNC	ENSG00000119729	24	0	0.00	14	3	17.65	-	-	-
RND3	0	genome.wustl.edu	37	2	151326603	151326603	+	Silent	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	2	151326603	151326603	C	T	SNP	RND3	ENST00000263895	human	ensembl	69_37n	-1	known	silent	c.633	p.Q211	0.999	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RND3	HGNC	ENSG00000115963	37	0	0.00	29	6	17.14	-	-	-
RNF167	0	genome.wustl.edu	37	17	4843816	4843816	+	RNA	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	17	4843816	4843816	G	A	SNP	RNF167	ENST00000571365	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.465	-	-	-	no_errors	RNF167	HGNC	ENSG00000108523	72	0	0.00	31	4	11.43	-	-	-
SCNM1	0	genome.wustl.edu	37	1	151139007	151139007	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	151139007	151139007	C	T	SNP	SCNM1	ENST00000368905	human	ensembl	69_37n	+1	known	missense	c.112	p.R38W	0.992	NULL	NULL	-	no_errors	SCNM1	HGNC	ENSG00000163156	56	0	0.00	41	11	21.15	-	-	-
SETX	0	genome.wustl.edu	37	9	135206816	135206816	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	9	135206816	135206816	G	A	SNP	SETX	ENST00000372169	human	ensembl	69_37n	-1	known	silent	c.858	p.F286	1.000	NULL	NULL	-	no_errors	SETX	HGNC	ENSG00000107290	59	0	0.00	51	6	10.53	-	-	-
SF3B3	0	genome.wustl.edu	37	16	70595653	70595653	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	16	70595653	70595653	G	A	SNP	SF3B3	ENST00000302516	human	ensembl	69_37n	+1	known	missense	c.2254	p.E752K	1.000	superfamily_WD40_repeat_dom	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC	ENSG00000189091	73	0	0.00	53	9	14.52	-	-	-
SLC22A2	0	genome.wustl.edu	37	6	160668273	160668273	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	6	160668273	160668273	C	T	SNP	SLC22A2	ENST00000366953	human	ensembl	69_37n	-1	known	missense	c.900	p.M300I	0.230	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499	100	0	0.00	66	8	10.81	-	-	-
SLC24A1	0	genome.wustl.edu	37	15	65918261	65918261	+	Missense_Mutation	SNP	A	A	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	15	65918261	65918261	A	C	SNP	SLC24A1	ENST00000261892	human	ensembl	69_37n	+1	known	missense	c.1843	p.S615R	0.767	tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K-dep_Na/Ca-exchanger-like	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K-dep_Na/Ca-exchanger-like	-	no_errors	SLC24A1	HGNC	ENSG00000074621	59	0	0.00	47	6	11.32	-	-	-
SLC6A16	0	genome.wustl.edu	37	19	49793527	49793527	+	Missense_Mutation	SNP	G	G	C			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	49793527	49793527	G	C	SNP	SLC6A16	ENST00000335875	human	ensembl	69_37n	-1	known	missense	c.2064	p.F688L	0.394	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	35	0	0.00	17	4	19.05	-	-	-
SMG6	0	genome.wustl.edu	37	17	2203078	2203078	+	Silent	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	17	2203078	2203078	C	T	SNP	SMG6	ENST00000263073	human	ensembl	69_37n	-1	known	silent	c.969	p.R323	1.000	NULL	pfam_EST1,smart_PINc_nuc-bd	-	no_errors	SMG6	HGNC	ENSG00000070366	83	0	0.00	69	8	10.39	-	-	-
SNHG14	0	genome.wustl.edu	37	15	25330466	25330466	+	RNA	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	15	25330466	25330466	G	A	SNP	SNHG14	ENST00000546682	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	91	0	0.00	57	11	16.18	-	-	-
SPEN	0	genome.wustl.edu	37	1	16262705	16262705	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	1	16262705	16262705	C	T	SNP	SPEN	ENST00000375759	human	ensembl	69_37n	+1	known	nonsense	c.9970	p.Q3324*	0.998	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC-like,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	53	0	0.00	34	4	10.53	-	-	-
SPTLC3	0	genome.wustl.edu	37	20	13090784	13090784	+	Silent	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	20	13090784	13090784	G	T	SNP	SPTLC3	ENST00000399002	human	ensembl	69_37n	+1	known	silent	c.852	p.L284	1.000	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase_major_dom	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase_major_dom	-	no_errors	SPTLC3	HGNC	ENSG00000172296	21	0	0.00	13	3	18.75	-	-	-
STX19	0	genome.wustl.edu	37	3	93733952	93733952	+	Silent	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	93733952	93733952	G	A	SNP	STX19	ENST00000315099	human	ensembl	69_37n	-1	known	silent	c.162	p.I54	0.998	pfam_Syntaxin_N,superfamily_t-SNARE	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX19	HGNC	ENSG00000178750	58	0	0.00	39	6	13.33	-	-	-
TBCK	0	genome.wustl.edu	37	4	107092416	107092416	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	107092416	107092416	C	T	SNP	TBCK	ENST00000273980	human	ensembl	69_37n	-1	known	missense	c.2071	p.E691K	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rhodanese-like_dom,superfamily_Kinase-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Rab-GTPase-TBC_dom,smart_Rhodanese-like_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Prot_kinase_cat_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBCK	HGNC	ENSG00000145348	37	0	0.00	35	8	18.60	-	-	-
THAP5	0	genome.wustl.edu	37	7	108210035	108210035	+	RNA	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	7	108210035	108210035	G	A	SNP	THAP5	ENST00000412935	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	THAP5	HGNC	ENSG00000177683	59	0	0.00	29	4	12.12	-	-	-
TP53BP1	0	genome.wustl.edu	37	15	43766949	43766949	+	Missense_Mutation	SNP	C	C	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	15	43766949	43766949	C	A	SNP	TP53BP1	ENST00000382044	human	ensembl	69_37n	-1	known	missense	c.1102	p.V368F	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	25	0	0.00	23	4	14.81	-	-	-
TPTE2P5	0	genome.wustl.edu	37	13	41400715	41400715	+	Splice_Site	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	13	41400715	41400715	C	T	SNP	TPTE2P5	ENST00000458118	human	ensembl	69_37n	-1	known	splice_site	c.NULL	NULL	0.002	-	-	-	no_coding_region:pseudogene	TPTE2P5	HGNC	ENSG00000168852	29	0	0.00	26	7	21.21	-	-	-
TTLL5	0	genome.wustl.edu	37	14	76238123	76238123	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	14	76238123	76238123	C	T	SNP	TTLL5	ENST00000298832	human	ensembl	69_37n	+1	known	nonsense	c.2062	p.Q688*	1.000	NULL	pfam_Tub_tyr_ligase	-	no_errors	TTLL5	HGNC	ENSG00000119685	51	0	0.00	43	6	12.24	-	-	-
UTRN	0	genome.wustl.edu	37	6	145157645	145157645	+	Nonsense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	6	145157645	145157645	C	T	SNP	UTRN	ENST00000367545	human	ensembl	69_37n	+1	known	nonsense	c.10033	p.Q3345*	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_Rsp5_WWP,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_Rsp5_WWP,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_Rsp5_WWP,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	24	0	0.00	14	5	26.32	-	-	-
XIRP1	0	genome.wustl.edu	37	3	39228407	39228407	+	Missense_Mutation	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	3	39228407	39228407	C	T	SNP	XIRP1	ENST00000340369	human	ensembl	69_37n	-1	known	missense	c.2530	p.G844R	1.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP1	HGNC	ENSG00000168334	39	0	0.00	18	6	25.00	-	-	-
XPO5	0	genome.wustl.edu	37	6	43494425	43494425	+	Missense_Mutation	SNP	T	T	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	6	43494425	43494425	T	A	SNP	XPO5	ENST00000265351	human	ensembl	69_37n	-1	known	missense	c.2981	p.D994V	0.995	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	29	0	0.00	35	5	12.50	-	-	-
XYLT2	0	genome.wustl.edu	37	17	48433485	48433485	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	17	48433485	48433485	G	A	SNP	XYLT2	ENST00000017003	human	ensembl	69_37n	+1	known	missense	c.1345	p.E449K	0.999	pfam_Glyco_trans_14	pfam_XylT_met,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532	52	0	0.00	41	7	14.58	-	-	-
ZNF420	0	genome.wustl.edu	37	19	37620968	37620968	+	Missense_Mutation	SNP	G	G	A			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	37620968	37620968	G	A	SNP	ZNF420	ENST00000304239	human	ensembl	69_37n	+1	putative	missense	c.1441	p.D481N	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF420	HGNC	ENSG00000197050	63	0	0.00	68	8	10.53	-	-	-
ZNF529	0	genome.wustl.edu	37	19	37038799	37038799	+	Missense_Mutation	SNP	G	G	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	19	37038799	37038799	G	T	SNP	ZNF529	ENST00000591340	human	ensembl	69_37n	-1	known	missense	c.661	p.H221N	0.983	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF529	HGNC	ENSG00000186020	27	0	0.00	29	5	14.71	-	-	-
ZNF718	0	genome.wustl.edu	37	4	155278	155278	+	RNA	SNP	C	C	T			TCGA-EW-A3E8-01B-11D-A243-09	TCGA-EW-A3E8-10A-01D-A243-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5fa6274a-0c87-4648-8902-6fd01fcc8e23	2032db41-2068-4ac4-935a-36a3a8a6093b	4	155278	155278	C	T	SNP	ZNF718	ENST00000400172	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF718	HGNC	ENSG00000250312	32	0	0.00	14	4	22.22	-	-	-
