Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	transcript_error_WU	default_gene_name_WU	gene_name_source_WU	ensembl_gene_id	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumors_var_reads	tumor_vaf	EVS_EA	EVS_AA	EVS_All
ABCB9	0	genome.wustl.edu	37	12	123419951	123419951	+	Silent	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	123419951	123419951	G	A	SNP	ABCB9	ENST00000442028	human	ensembl	69_37n	-1	known	silent	c.1771	p.L591	1.000	pfam_ABC_transporter-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC_transptrTM_dom_typ1,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC_transporter_type1	-	no_errors	ABCB9	HGNC	ENSG00000150967	40	0	0.00	21	4	16.00	-	-	-
ABCG4	0	genome.wustl.edu	37	11	119027390	119027390	+	Splice_Site	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	119027390	119027390	T	A	SNP	ABCG4	ENST00000307417	human	ensembl	69_37n	+1	known	splice_site	c.925+2	e7+2	1.000	-	-	-	no_errors	ABCG4	HGNC	ENSG00000172350	27	0	0.00	21	9	30.00	-	-	-
ACCS	0	genome.wustl.edu	37	11	44102768	44102768	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	44102768	44102768	A	G	SNP	ACCS	ENST00000263776	human	ensembl	69_37n	+1	known	missense	c.1009	p.T337A	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,prints_ACC_synthase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase_major_dom,prints_ACC_synthase	-	no_errors	ACCS	HGNC	ENSG00000110455	43	0	0.00	10	9	47.37	-	-	-
ACVR1C	0	genome.wustl.edu	37	2	158412843	158412843	+	Silent	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	158412843	158412843	T	G	SNP	ACVR1C	ENST00000243349	human	ensembl	69_37n	-1	known	silent	c.306	p.A102	0.457	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	-	no_errors	ACVR1C	HGNC	ENSG00000123612	38	0	0.00	31	19	38.00	-	-	-
ADCY1	0	genome.wustl.edu	37	7	45703971	45703971	+	Silent	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	45703971	45703971	G	A	SNP	ADCY1	ENST00000432715	human	ensembl	69_37n	+1	putative	silent	c.1014	p.T338	0.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742	43	0	0.00	23	4	14.29	-	-	-
ADCY1	0	genome.wustl.edu	37	7	45725735	45725735	+	Missense_Mutation	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	45725735	45725735	T	G	SNP	ADCY1	ENST00000297323	human	ensembl	69_37n	+1	known	missense	c.2248	p.L750V	1.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742	75	0	0.00	43	11	20.37	-	-	-
ADRA1A	0	genome.wustl.edu	37	8	26722177	26722177	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	8	26722177	26722177	C	A	SNP	ADRA1A	ENST00000380586	human	ensembl	69_37n	-1	known	missense	c.310	p.A104S	1.000	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_Adrene_rcpt_A1Cs,prints_7TM_GPCR_Rhodpsn,prints_Adrnrgc_rcpt	-	no_errors	ADRA1A	HGNC	ENSG00000120907	39	0	0.00	6	13	68.42	-	-	-
AGTR1	0	genome.wustl.edu	37	3	148459738	148459738	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	148459738	148459738	G	T	SNP	AGTR1	ENST00000349243	human	ensembl	69_37n	+1	known	missense	c.916	p.G306W	1.000	prints_ATII_AT1_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Brdyknn_rcpt	pfam_7TM_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_supfam,prints_ATII_AT1_rcpt,prints_ATII_rcpt,prints_7TM_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Frt_met_rcpt,prints_Brdyknn_rcpt,prints_P2_purnocptor	-	no_errors	AGTR1	HGNC	ENSG00000144891	22	0	0.00	20	15	42.86	-	-	-
AKAP8L	0	genome.wustl.edu	37	19	15512205	15512205	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	19	15512205	15512205	C	G	SNP	AKAP8L	ENST00000397410	human	ensembl	69_37n	-1	known	missense	c.572	p.R191P	0.992	NULL	pfam_AKAP95	-	no_errors	AKAP8L	HGNC	ENSG00000011243	55	0	0.00	43	22	33.33	-	-	-
ALK	0	genome.wustl.edu	37	2	29420462	29420462	+	Missense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	29420462	29420462	T	A	SNP	ALK	ENST00000389048	human	ensembl	69_37n	-1	known	missense	c.4019	p.E1340V	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_cat_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094	45	0	0.00	39	7	14.89	-	-	-
ALS2CR11	0	genome.wustl.edu	37	2	202357128	202357128	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	202357128	202357128	A	C	SNP	ALS2CR11	ENST00000439140	human	ensembl	69_37n	-1	novel	missense	c.3936	p.N1312K	0.944	NULL	superfamily_C2_Ca/lipid-bd_dom_CaLB	-	no_errors	ALS2CR11	HGNC	ENSG00000155754	19	0	0.00	19	11	36.67	-	-	-
AMPH	0	genome.wustl.edu	37	7	38467842	38467842	+	RNA	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	38467842	38467842	A	G	SNP	AMPH	ENST00000471913	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AMPH	HGNC	ENSG00000078053	58	0	0.00	52	7	11.86	-	-	-
AMPH	0	genome.wustl.edu	37	7	38468463	38468463	+	RNA	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	38468463	38468463	C	T	SNP	AMPH	ENST00000467580	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AMPH	HGNC	ENSG00000078053	38	0	0.00	30	4	11.43	-	-	-
ANKRD36	0	genome.wustl.edu	37	2	97860487	97860487	+	Missense_Mutation	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	97860487	97860487	T	C	SNP	ANKRD36	ENST00000420699	human	ensembl	69_37n	+1	known	missense	c.2474	p.L825S	0.064	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36	HGNC	ENSG00000135976	120	0	0.00	112	13	10.40	-	-	-
ANO4	0	genome.wustl.edu	37	12	101133704	101133704	+	Frame_Shift_Del	DEL	C	C	-			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	101133704	101133704	C	-	DEL	ANO4	ENST00000538618	human	ensembl	69_37n	+1	known	frame_shift_del	c.179	p.L61fs	0.959	NULL	NULL	-	no_errors	ANO4	HGNC	ENSG00000151572	82	0	0.00	31	4	11.43	-	-	-
ANO4	0	genome.wustl.edu	37	12	101133706	101133706	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	101133706	101133706	C	A	SNP	ANO4	ENST00000538618	human	ensembl	69_37n	+1	known	missense	c.181	p.L61I	0.997	NULL	NULL	-	no_errors	ANO4	HGNC	ENSG00000151572	91	0	0.00	33	4	10.81	-	-	-
ARHGAP21	0	genome.wustl.edu	37	10	24874322	24874322	+	Silent	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	24874322	24874322	A	C	SNP	ARHGAP21	ENST00000396432	human	ensembl	69_37n	-1	known	silent	c.4896	p.P1632	0.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	118	0	0.00	115	34	22.67	-	-	-
ARHGAP6	0	genome.wustl.edu	37	X	11162204	11162204	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	11162204	11162204	C	A	SNP	ARHGAP6	ENST00000337414	human	ensembl	69_37n	-1	known	missense	c.2072	p.G691V	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP6	HGNC	ENSG00000047648	49	0	0.00	31	4	11.43	-	-	-
ARHGEF15	0	genome.wustl.edu	37	17	8221893	8221893	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	8221893	8221893	C	T	SNP	ARHGEF15	ENST00000361926	human	ensembl	69_37n	+1	known	silent	c.1785	p.I595	0.933	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	28	0	0.00	7	9	56.25	-	-	-
ARSA	0	genome.wustl.edu	37	22	51065410	51065410	+	Missense_Mutation	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	51065410	51065410	A	T	SNP	ARSA	ENST00000216124	human	ensembl	69_37n	-1	known	missense	c.536	p.V179D	0.998	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSA	HGNC	ENSG00000100299	12	0	0.00	17	7	29.17	-	-	-
ASTN1	0	genome.wustl.edu	37	1	176852105	176852105	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	176852105	176852105	G	T	SNP	ASTN1	ENST00000367654	human	ensembl	69_37n	-1	known	missense	c.3276	p.D1092E	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	superfamily_Fibronectin_type3,smart_EGF-like,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	62	0	0.00	33	7	17.50	-	-	-
ATP6V0B	0	genome.wustl.edu	37	1	44440642	44440642	+	RNA	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	44440642	44440642	A	G	SNP	ATP6V0B	ENST00000472277	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.363	-	-	-	no_errors	ATP6V0B	HGNC	ENSG00000117410	8	0	0.00	2	4	66.67	-	-	-
ATXN7L1	0	genome.wustl.edu	37	7	105254755	105254755	+	Nonsense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	105254755	105254755	T	A	SNP	ATXN7L1	ENST00000419735	human	ensembl	69_37n	-1	known	nonsense	c.2026	p.K676*	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	39	0	0.00	32	4	11.11	-	-	-
BRSK1	0	genome.wustl.edu	37	19	55820028	55820028	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	19	55820028	55820028	G	C	SNP	BRSK1	ENST00000590333	human	ensembl	69_37n	+1	known	missense	c.2159	p.R720P	0.997	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_cat_dom	-	no_errors	BRSK1	HGNC	ENSG00000160469	82	0	0.00	39	6	13.33	-	-	-
C10orf112	0	genome.wustl.edu	37	10	19678226	19678226	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	19678226	19678226	C	T	SNP	C10orf112	ENST00000454679	human	ensembl	69_37n	+1	known	missense	c.2690	p.A897V	0.000	superfamily_ConA-like_lec_gl	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	32	0	0.00	36	10	21.74	-	-	-
C12orf69	0	genome.wustl.edu	37	12	14959605	14959606	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	14959605	14959606	TT	-	DEL	C12orf69	ENST00000316048	human	ensembl	69_37n	-1	known	frame_shift_del	c.10_9	p.S4fs	0.998:0.961	NULL	NULL	-	no_errors	C12orf69	HGNC	ENSG00000179256	21	0	0.00	39	8	17.02	-	-	-
C1orf127	0	genome.wustl.edu	37	1	11014110	11014110	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	11014110	11014110	G	A	SNP	C1orf127	ENST00000520253	human	ensembl	69_37n	-1	putative	missense	c.998	p.S333F	0.000	NULL	superfamily_DNA-bd_dom_put	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	C1orf127	HGNC	ENSG00000175262	49	0	0.00	18	13	41.94	-	-	-
C2orf27A	0	genome.wustl.edu	37	2	132494182	132494182	+	RNA	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	132494182	132494182	G	C	SNP	C2orf27A	ENST00000466372	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	C2orf27A	HGNC	ENSG00000197927	61	0	0.00	54	6	10.00	-	-	-
C7	0	genome.wustl.edu	37	5	40981594	40981594	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	40981594	40981594	G	T	SNP	C7	ENST00000313164	human	ensembl	69_37n	+1	known	missense	c.2451	p.E817D	0.997	smart_FacI_MAC	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Complement_control_module,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C7	HGNC	ENSG00000112936	41	0	0.00	33	8	19.51	-	-	-
C7orf73	0	genome.wustl.edu	37	7	135377238	135377238	+	RNA	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	135377238	135377238	T	G	SNP	C7orf73	ENST00000422968	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C7orf73	HGNC	ENSG00000243317	13	0	0.00	10	4	28.57	-	-	-
C8orf76	0	genome.wustl.edu	37	8	124232476	124232476	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	8	124232476	124232476	A	G	SNP	C8orf76	ENST00000276704	human	ensembl	69_37n	-1	known	missense	c.1010	p.V337A	0.922	NULL	NULL	-	no_errors	C8orf76	HGNC	ENSG00000189376	33	0	0.00	62	9	12.68	-	-	-
C9orf171	0	genome.wustl.edu	37	9	135374986	135374986	+	Nonsense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	135374986	135374986	C	T	SNP	C9orf171	ENST00000393215	human	ensembl	69_37n	+1	putative	nonsense	c.523	p.R175*	1.000	NULL	NULL	-	no_errors	C9orf171	HGNC	ENSG00000188523	37	0	0.00	9	11	55.00	-	-	-
CD53	0	genome.wustl.edu	37	1	111440293	111440293	+	RNA	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	111440293	111440293	C	G	SNP	CD53	ENST00000464329	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD53	HGNC	ENSG00000143119	15	0	0.00	11	5	31.25	-	-	-
CD7	0	genome.wustl.edu	37	17	80274097	80274097	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	80274097	80274097	C	A	SNP	CD7	ENST00000312648	human	ensembl	69_37n	-1	known	missense	c.586	p.V196L	0.124	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	CD7	HGNC	ENSG00000173762	41	0	0.00	41	11	21.15	-	-	-
CENPE	0	genome.wustl.edu	37	4	104079587	104079587	+	Missense_Mutation	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	4	104079587	104079587	T	G	SNP	CENPE	ENST00000265148	human	ensembl	69_37n	-1	known	missense	c.2903	p.N968T	0.997	NULL	pfam_Kinesin_motor_dom,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	16	0	0.00	19	5	20.83	-	-	-
CENPI	0	genome.wustl.edu	37	X	100387395	100387395	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	100387395	100387395	C	A	SNP	CENPI	ENST00000372927	human	ensembl	69_37n	+1	known	missense	c.1420	p.L474I	0.995	pfam_Centromere_CenpI	pfam_Centromere_CenpI	-	no_errors	CENPI	HGNC	ENSG00000102384	32	0	0.00	45	8	15.09	-	-	-
CLEC3B	0	genome.wustl.edu	37	3	45072372	45072372	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	45072372	45072372	G	T	SNP	CLEC3B	ENST00000296130	human	ensembl	69_37n	+1	known	missense	c.163	p.A55S	1.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_Pancreatis_ac	-	no_errors	CLEC3B	HGNC	ENSG00000163815	47	0	0.00	10	7	41.18	-	-	-
COL6A2	0	genome.wustl.edu	37	21	47545705	47545705	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	21	47545705	47545705	G	A	SNP	COL6A2	ENST00000300527	human	ensembl	69_37n	+1	known	missense	c.1976	p.R659H	0.995	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173	104	0	0.00	111	19	14.62	-	-	-
CXADR	0	genome.wustl.edu	37	21	18933747	18933747	+	Silent	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	21	18933747	18933747	A	G	SNP	CXADR	ENST00000284878	human	ensembl	69_37n	+1	known	silent	c.786	p.K262	0.993	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	CXADR	HGNC	ENSG00000154639	36	0	0.00	21	15	41.67	-	-	-
CYP51A1	0	genome.wustl.edu	37	7	91743114	91743114	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	91743114	91743114	A	C	SNP	CYP51A1	ENST00000003100	human	ensembl	69_37n	-1	known	missense	c.1395	p.I465M	0.801	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP51A1	HGNC	ENSG00000001630	25	0	0.00	21	7	25.00	-	-	-
DAAM1	0	genome.wustl.edu	37	14	59835650	59835650	+	RNA	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	14	59835650	59835650	G	A	SNP	DAAM1	ENST00000553966	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DAAM1	HGNC	ENSG00000100592	52	0	0.00	40	9	18.37	-	-	-
DCHS1	0	genome.wustl.edu	37	11	6652952	6652952	+	Silent	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	6652952	6652952	G	C	SNP	DCHS1	ENST00000299441	human	ensembl	69_37n	-1	known	silent	c.3570	p.P1190	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	28	0	0.00	7	15	68.18	-	-	-
DDX53	0	genome.wustl.edu	37	X	23018405	23018405	+	Silent	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	23018405	23018405	G	C	SNP	DDX53	ENST00000327968	human	ensembl	69_37n	+1	known	silent	c.231	p.S77	0.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_KH_dom_type_1,smart_KH_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_KH_dom_type_1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX53	HGNC	ENSG00000184735	51	0	0.00	14	15	51.72	-	-	-
DNAJC7	0	genome.wustl.edu	37	17	40148414	40148414	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	40148414	40148414	A	G	SNP	DNAJC7	ENST00000457167	human	ensembl	69_37n	-1	known	missense	c.320	p.L107P	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR-1,pfam_TPR_2,pfam_DnaJ_N,superfamily_DnaJ_N,smart_TPR_repeat,smart_DnaJ_N,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_DnaJ_N,prints_Hsp_DnaJ	-	no_errors	DNAJC7	HGNC	ENSG00000168259	51	0	0.00	16	19	54.29	-	-	-
DUSP16	0	genome.wustl.edu	37	12	12673999	12673999	+	Missense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	12673999	12673999	T	A	SNP	DUSP16	ENST00000228862	human	ensembl	69_37n	-1	known	missense	c.34	p.T12S	1.000	superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-specificity_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP16	HGNC	ENSG00000111266	82	0	0.00	111	37	25.00	-	-	-
EIF2D	0	genome.wustl.edu	37	1	206769147	206769147	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	206769147	206769147	G	A	SNP	EIF2D	ENST00000271764	human	ensembl	69_37n	-1	known	missense	c.1429	p.P477S	0.987	superfamily_TIF_SUI1	pfam_TIF_SUI1,superfamily_TIF_SUI1,superfamily_SWIB_MDM2_domain,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,pfscan_TIF_SUI1	-	no_errors	EIF2D	HGNC	ENSG00000143486	53	0	0.00	37	15	28.85	-	-	-
EIF4A2	0	genome.wustl.edu	37	3	186504432	186504432	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	186504432	186504432	G	C	SNP	EIF4A2	ENST00000440191	human	ensembl	69_37n	+1	known	missense	c.772	p.E258Q	1.000	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A2	HGNC	ENSG00000156976	48	0	0.00	61	7	10.29	-	-	-
EPB41L4A	0	genome.wustl.edu	37	5	111481600	111481600	+	RNA	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	111481600	111481600	A	T	SNP	EPB41L4A	ENST00000507810	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	EPB41L4A	HGNC	ENSG00000129595	62	0	0.00	32	5	13.51	-	-	-
EYS	0	genome.wustl.edu	37	6	64436412	64436412	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	64436412	64436412	C	G	SNP	EYS	ENST00000370616	human	ensembl	69_37n	-1	known	missense	c.8296	p.G2766R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_dom,superfamily_ConA-like_lec_gl,smart_EGF-like,smart_EGF-like_Ca-bd,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	36	0	0.00	27	5	15.62	-	-	-
FAM20C	0	genome.wustl.edu	37	7	195732	195735	+	Frame_Shift_Del	DEL	GGTA	GGTA	-			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	GGTA	GGTA					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	195732	195735	GGTA	-	DEL	FAM20C	ENST00000313766	human	ensembl	69_37n	+1	known	frame_shift_del	c.784	p.A262fs	1.000	NULL	pfam_DUF1193	-	no_errors	FAM20C	HGNC	ENSG00000177706	43	0	0.00	30	4	11.43	-	-	-
FAM3A	0	genome.wustl.edu	37	X	153736153	153736153	+	Missense_Mutation	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	153736153	153736153	A	T	SNP	FAM3A	ENST00000359889	human	ensembl	69_37n	-1	known	missense	c.374	p.M125K	1.000	NULL	NULL	-	no_errors	FAM3A	HGNC	ENSG00000071889	57	0	0.00	36	6	14.29	-	-	-
FAM86HP	0	genome.wustl.edu	37	3	129822633	129822633	+	RNA	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	129822633	129822633	C	A	SNP	FAM86HP	ENST00000506448	human	ensembl	69_37n	-1	putative	rna	NULL	NULL	0.045	-	-	-	no_errors	FAM86HP	HGNC	ENSG00000253540	160	1	0.62	56	46	44.66	-	-	-
FCHSD1	0	genome.wustl.edu	37	5	141025453	141025453	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	141025453	141025453	G	A	SNP	FCHSD1	ENST00000435817	human	ensembl	69_37n	-1	known	missense	c.1196	p.A399V	0.997	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH,superfamily_SH3_domain,smart_FCH,smart_SH3_domain,pfscan_FCH,pfscan_SH3_domain	-	no_errors	FCHSD1	HGNC	ENSG00000197948	65	0	0.00	14	20	58.82	-	-	-
GALNS	0	genome.wustl.edu	37	16	88904078	88904080	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	88904078	88904080	TTG	-	DEL	GALNS	ENST00000268695	human	ensembl	69_37n	-1	known	in_frame_del	c.518_516	p.N172in_frame_del	0.581:0.999:1.000	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	GALNS	HGNC	ENSG00000141012	83	0	0.00	41	5	10.64	-	-	-
GAS2L3	0	genome.wustl.edu	37	12	100994202	100994202	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	100994202	100994202	C	T	SNP	GAS2L3	ENST00000266754	human	ensembl	69_37n	+1	known	silent	c.61	p.L21	1.000	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2L3	HGNC	ENSG00000139354	35	0	0.00	13	10	43.48	-	-	-
GOLGA6L2	0	genome.wustl.edu	37	15	23692290	23692290	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	15	23692290	23692290	C	T	SNP	GOLGA6L2	ENST00000566571	human	ensembl	69_37n	-1	known	missense	c.39	p.M13I	0.099	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	67	0	0.00	12	4	25.00	-	-	-
GPR133	0	genome.wustl.edu	37	12	131590371	131590371	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	131590371	131590371	G	T	SNP	GPR133	ENST00000261654	human	ensembl	69_37n	+1	known	missense	c.1848	p.Q616H	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR133	HGNC	ENSG00000111452	61	0	0.00	7	17	70.83	-	-	-
GRIK3	0	genome.wustl.edu	37	1	37356521	37356521	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	37356521	37356521	C	A	SNP	GRIK3	ENST00000373091	human	ensembl	69_37n	-1	known	missense	c.292	p.A98S	1.000	pfam_ANF_lig-bd_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	95	0	0.00	53	9	14.52	-	-	-
GSDMA	0	genome.wustl.edu	37	17	38132225	38132225	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	38132225	38132225	A	C	SNP	GSDMA	ENST00000301659	human	ensembl	69_37n	+1	known	missense	c.1070	p.K357T	1.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMA	HGNC	ENSG00000167914	43	0	0.00	14	4	22.22	-	-	-
GSPT1	0	genome.wustl.edu	37	16	11979099	11979099	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	11979099	11979099	A	C	SNP	GSPT1	ENST00000434724	human	ensembl	69_37n	-1	known	missense	c.1286	p.L429W	1.000	NULL	pfam_ProtSyn_GTP-bd,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_elong_init/rib_B-barrel,prints_ProtSyn_GTP-bd	-	no_errors	GSPT1	HGNC	ENSG00000103342	36	0	0.00	37	8	17.78	-	-	-
H19	0	genome.wustl.edu	37	11	2018168	2018168	+	RNA	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	2018168	2018168	C	T	SNP	H19	ENST00000411754	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	H19	HGNC	ENSG00000130600	56	0	0.00	43	5	10.42	-	-	-
HERC2	0	genome.wustl.edu	37	15	28386674	28386674	+	Silent	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	15	28386674	28386674	G	T	SNP	HERC2	ENST00000261609	human	ensembl	69_37n	-1	known	silent	c.11919	p.V3973	0.101	pfam_Reg_chr_condens,superfamily_Reg_csome_cond/b-lactamase_inh,smart_Beta-propeller_rpt_TECPR,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Reg_csome_cond/b-lactamase_inh,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5,superfamily_UBA-like,superfamily_CUB,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	77	0	0.00	22	13	37.14	-	-	-
HIVEP2	0	genome.wustl.edu	37	6	143092672	143092672	+	Silent	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	143092672	143092672	C	G	SNP	HIVEP2	ENST00000012134	human	ensembl	69_37n	-1	known	silent	c.3204	p.T1068	0.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	49	0	0.00	19	18	47.37	-	-	-
ICAM2	0	genome.wustl.edu	37	17	62083991	62083991	+	Nonsense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	62083991	62083991	C	A	SNP	ICAM2	ENST00000412356	human	ensembl	69_37n	-1	known	nonsense	c.61	p.G21*	0.999	pfam_ICAM_N	pfam_ICAM_N,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM2	HGNC	ENSG00000108622	32	0	0.00	6	14	70.00	-	-	-
IGLV11-55	0	genome.wustl.edu	37	22	22556320	22556320	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	22556320	22556320	G	T	SNP	IGLV11-55	ENST00000390286	human	ensembl	69_37n	+1	known	missense	c.134	p.S45I	0.650	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGLV11-55	HGNC	ENSG00000211641	27	0	0.00	12	18	60.00	-	-	-
IGSF10	0	genome.wustl.edu	37	3	151164277	151164277	+	Silent	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	151164277	151164277	A	C	SNP	IGSF10	ENST00000282466	human	ensembl	69_37n	-1	known	silent	c.3492	p.R1164	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like	-	no_errors	IGSF10	HGNC	ENSG00000152580	123	0	0.00	82	63	43.15	-	-	-
INMT	0	genome.wustl.edu	37	7	30795547	30795547	+	RNA	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	30795547	30795547	A	G	SNP	INMT	ENST00000484180	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	INMT	HGNC	ENSG00000241644	9	0	0.00	7	5	41.67	-	-	-
IQGAP3	0	genome.wustl.edu	37	1	156536205	156536205	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	156536205	156536205	C	T	SNP	IQGAP3	ENST00000361170	human	ensembl	69_37n	-1	known	missense	c.259	p.D87N	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_WW_Rsp5_WWP,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP	-	no_errors	IQGAP3	HGNC	ENSG00000183856	25	0	0.00	18	12	40.00	-	-	-
KCNJ3	0	genome.wustl.edu	37	2	155711382	155711382	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	155711382	155711382	C	A	SNP	KCNJ3	ENST00000295101	human	ensembl	69_37n	+1	known	missense	c.1063	p.P355T	1.000	pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir_Cr2,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.1,prints_K_chnl_inward-rec_Kir_Cr2	-	no_errors	KCNJ3	HGNC	ENSG00000162989	69	0	0.00	52	8	13.33	-	-	-
KIAA0430	0	genome.wustl.edu	37	16	15696471	15696472	+	Frame_Shift_Ins	INS	-	-	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	15696471	15696472	-	G	INS	KIAA0430	ENST00000344181	human	ensembl	69_37n	-1	known	frame_shift_ins	c.3348_3347	p.P1117fs	0.008:0.011	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	14	0	0.00	13	5	27.78	-	-	-
LGALS3BP	0	genome.wustl.edu	37	17	76972047	76972047	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	76972047	76972047	C	G	SNP	LGALS3BP	ENST00000262776	human	ensembl	69_37n	-1	known	missense	c.244	p.G82R	1.000	pfam_Srcr_rcpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_Srcr_rcpt	pfam_Srcr_rcpt,pfam_BACK,superfamily_Srcr_rcpt-rel,superfamily_BTB/POZ_fold,smart_Srcr_rcpt-rel,smart_BACK,prints_Srcr_rcpt,pfscan_BTB/POZ-like,pfscan_Srcr_rcpt	-	no_errors	LGALS3BP	HGNC	ENSG00000108679	37	0	0.00	39	10	20.41	-	-	-
LGR5	0	genome.wustl.edu	37	12	71965338	71965338	+	Missense_Mutation	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	71965338	71965338	T	C	SNP	LGR5	ENST00000266674	human	ensembl	69_37n	+1	known	missense	c.1115	p.V372A	0.977	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_7TM_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pfscan_GPCR_Rhodpsn_supfam,prints_Gphrmn_rcpt,prints_7TM_GPCR_Rhodpsn	-	no_errors	LGR5	HGNC	ENSG00000139292	37	0	0.00	30	14	31.11	-	-	-
LINC00087	0	genome.wustl.edu	37	X	134232581	134232581	+	RNA	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	134232581	134232581	G	T	SNP	LINC00087	ENST00000433425	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.219	-	-	-	no_errors	LINC00087	HGNC	ENSG00000196972	70	0	0.00	13	5	27.78	-	-	-
LINGO2	0	genome.wustl.edu	37	9	27949115	27949115	+	Missense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	27949115	27949115	T	A	SNP	LINGO2	ENST00000308675	human	ensembl	69_37n	-1	known	missense	c.1555	p.T519S	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like	-	no_errors	LINGO2	HGNC	ENSG00000174482	74	0	0.00	19	9	32.14	-	-	-
LPIN3	0	genome.wustl.edu	37	20	39977740	39977740	+	Nonsense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	20	39977740	39977740	T	A	SNP	LPIN3	ENST00000373257	human	ensembl	69_37n	+1	known	nonsense	c.566	p.L189*	0.000	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793	59	0	0.00	32	9	21.95	-	-	-
LRP1	0	genome.wustl.edu	37	12	57590002	57590002	+	Missense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	57590002	57590002	T	A	SNP	LRP1	ENST00000243077	human	ensembl	69_37n	+1	known	missense	c.8834	p.L2945H	1.000	superfamily_Growth_fac_rcpt,smart_EGF-like_Ca-bd,smart_EGF-like	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd,smart_EGF-like,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	96	0	0.00	63	24	27.59	-	-	-
LRP1B	0	genome.wustl.edu	37	2	141032147	141032147	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	141032147	141032147	C	A	SNP	LRP1B	ENST00000389484	human	ensembl	69_37n	-1	known	missense	c.12988	p.V4330L	1.000	smart_EGF-like,pfscan_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_dom,superfamily_Growth_fac_rcpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like,smart_EGF-like_Ca-bd,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	59	0	0.00	45	9	16.67	-	-	-
LY75	0	genome.wustl.edu	37	2	160714973	160714973	+	Silent	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	160714973	160714973	T	A	SNP	LY75	ENST00000554112	human	ensembl	69_37n	-1	known	silent	c.2283	p.P761	0.123	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219	37	0	0.00	21	13	38.24	-	-	-
LYZL1	0	genome.wustl.edu	37	10	29578111	29578111	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	29578111	29578111	C	T	SNP	LYZL1	ENST00000375500	human	ensembl	69_37n	+1	known	missense	c.65	p.S22L	0.001	NULL	pfam_Glyco_hydro_22,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22,prints_Glyco_hydro_22_lys	-	no_errors	LYZL1	HGNC	ENSG00000120563	56	0	0.00	40	5	11.11	-	-	-
MACF1	0	genome.wustl.edu	37	1	39793021	39793021	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	39793021	39793021	A	C	SNP	MACF1	ENST00000317713	human	ensembl	69_37n	+1	known	missense	c.4625	p.Q1542P	1.000	NULL	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_Ca-bd,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_HAND_2	-	no_errors	MACF1	HGNC	ENSG00000127603	32	0	0.00	28	10	26.32	-	-	-
MALSU1	0	genome.wustl.edu	37	7	23338986	23338986	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	23338986	23338986	C	T	SNP	MALSU1	ENST00000466681	human	ensembl	69_37n	+1	known	silent	c.15	p.G5	0.000	NULL	pfam_Oligomer_dom,tigrfam_Ribosome-assoc_Iojap-like	-	no_errors	MALSU1	HGNC	ENSG00000156928	15	0	0.00	8	7	46.67	-	-	-
MAP3K5	0	genome.wustl.edu	37	6	137018482	137018482	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	137018482	137018482	G	C	SNP	MAP3K5	ENST00000359015	human	ensembl	69_37n	-1	known	missense	c.850	p.R284G	1.000	NULL	pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	27	0	0.00	16	13	44.83	-	-	-
MAP3K7	0	genome.wustl.edu	37	6	91226129	91226129	+	RNA	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	91226129	91226129	C	G	SNP	MAP3K7	ENST00000479630	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MAP3K7	HGNC	ENSG00000135341	12	0	0.00	4	11	73.33	-	-	-
MCF2	0	genome.wustl.edu	37	X	138680641	138680641	+	Nonsense_Mutation	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	138680641	138680641	A	T	SNP	MCF2	ENST00000370578	human	ensembl	69_37n	-1	known	nonsense	c.2288	p.L763*	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2	HGNC	ENSG00000101977	44	0	0.00	24	5	17.24	-	-	-
METTL2B	0	genome.wustl.edu	37	7	128095923	128095923	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	128095923	128095923	C	T	SNP	METTL2B	ENST00000462662	human	ensembl	69_37n	+1	putative	silent	c.30	p.G10	0.000	NULL	NULL	-	no_start_codon:no_stop_codon:bad_bp_length_for_coding_region	METTL2B	HGNC	ENSG00000165055	86	0	0.00	35	19	35.19	-	-	-
MICAL1	0	genome.wustl.edu	37	6	109767568	109767568	+	Silent	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	109767568	109767568	A	G	SNP	MICAL1	ENST00000368952	human	ensembl	69_37n	-1	known	silent	c.2409	p.T803	0.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICAL1	HGNC	ENSG00000135596	65	0	0.00	70	9	11.39	-	-	-
MIR4277	0	genome.wustl.edu	37	5	1708983	1708983	+	RNA	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	1708983	1708983	G	A	SNP	MIR4277	ENST00000578298	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MIR4277	HGNC	ENSG00000263746	39	0	0.00	39	6	13.04	-	-	-
MPZL1	0	genome.wustl.edu	37	1	167757608	167757608	+	RNA	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	167757608	167757608	T	C	SNP	MPZL1	ENST00000403379	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	MPZL1	HGNC	ENSG00000197965	33	0	0.00	31	4	11.43	-	-	-
MRVI1-AS1	0	genome.wustl.edu	37	11	10615516	10615516	+	RNA	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	10615516	10615516	T	C	SNP	MRVI1-AS1	ENST00000525578	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MRVI1-AS1	HGNC	ENSG00000177112	11	0	0.00	3	7	70.00	-	-	-
MTO1	0	genome.wustl.edu	37	6	74207461	74207461	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	74207461	74207461	A	G	SNP	MTO1	ENST00000415954	human	ensembl	69_37n	+1	known	missense	c.1879	p.T627A	0.921	NULL	pfam_GIDA-rel,pfam_FAD_bind_dom,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_GidA	-	no_errors	MTO1	HGNC	ENSG00000135297	49	0	0.00	41	14	25.45	-	-	-
MUC17	0	genome.wustl.edu	37	7	100680493	100680493	+	Silent	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	100680493	100680493	T	A	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	silent	c.5796	p.P1932	0.000	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	63	0	0.00	45	14	23.73	-	-	-
MUC17	0	genome.wustl.edu	37	7	100681460	100681460	+	Missense_Mutation	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	100681460	100681460	A	T	SNP	MUC17	ENST00000306151	human	ensembl	69_37n	+1	known	missense	c.6763	p.T2255S	0.006	NULL	pfam_SEA,smart_SEA,pfscan_EG-like_dom,pfscan_SEA	-	no_errors	MUC17	HGNC	ENSG00000169876	104	1	0.94	52	10	15.87	-	-	-
MYH2	0	genome.wustl.edu	37	17	10426683	10426683	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	10426683	10426683	G	T	SNP	MYH2	ENST00000245503	human	ensembl	69_37n	-1	known	missense	c.5519	p.A1840D	0.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	56	0	0.00	15	27	64.29	-	-	-
NADSYN1	0	genome.wustl.edu	37	11	71189512	71189512	+	Nonsense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	71189512	71189512	G	A	SNP	NADSYN1	ENST00000527852	human	ensembl	69_37n	+1	known	nonsense	c.164	p.W55*	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	NADSYN1	HGNC	ENSG00000172890	33	0	0.00	20	7	25.93	-	-	-
NR6A1	0	genome.wustl.edu	37	9	127316675	127316675	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	127316675	127316675	C	T	SNP	NR6A1	ENST00000487099	human	ensembl	69_37n	-1	known	missense	c.317	p.R106Q	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR6A1	HGNC	ENSG00000148200	37	0	0.00	10	10	50.00	-	-	-
NUB1	0	genome.wustl.edu	37	7	151049231	151049231	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	151049231	151049231	C	T	SNP	NUB1	ENST00000470316	human	ensembl	69_37n	+1	known	missense	c.397	p.P133S	0.000	NULL	NULL	-	no_errors	NUB1	HGNC	ENSG00000013374	78	0	0.00	45	6	11.76	-	-	-
OBSCN	0	genome.wustl.edu	37	1	228496062	228496062	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	228496062	228496062	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	69_37n	+1	known	silent	c.12717	p.S4239	0.996	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_cat_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_cat_dom,pfscan_Ig-like,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	66	0	0.00	72	9	11.11	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123518527	123518527	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	123518527	123518527	C	T	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	missense	c.6254	p.G2085E	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	86	0	0.00	74	14	15.91	-	-	-
ODZ1	0	genome.wustl.edu	37	X	123839049	123839049	+	Missense_Mutation	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	123839049	123839049	T	G	SNP	ODZ1	ENST00000422452	human	ensembl	69_37n	-1	known	missense	c.829	p.S277R	1.000	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EGF-like,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	ODZ1	HGNC	ENSG00000009694	20	0	0.00	18	6	25.00	-	-	-
OR11H4	0	genome.wustl.edu	37	14	20711290	20711290	+	Missense_Mutation	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	14	20711290	20711290	T	C	SNP	OR11H4	ENST00000315409	human	ensembl	69_37n	+1	known	missense	c.340	p.F114L	1.000	pfam_7TM_GPCR_Rhodpsn,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	OR11H4	HGNC	ENSG00000176198	63	0	0.00	56	7	11.11	-	-	-
P2RY2	0	genome.wustl.edu	37	11	72946005	72946005	+	Silent	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	72946005	72946005	C	G	SNP	P2RY2	ENST00000311131	human	ensembl	69_37n	+1	known	silent	c.801	p.L267	1.000	pfam_7TM_GPCR_Rhodpsn,prints_P2_purnocptor,prints_7TM_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_supfam	pfam_7TM_GPCR_Rhodpsn,prints_P2U_purnocptor,prints_P2_purnocptor,prints_7TM_GPCR_Rhodpsn,prints_P2Y4_purnocptor,pfscan_GPCR_Rhodpsn_supfam	-	no_errors	P2RY2	HGNC	ENSG00000175591	51	0	0.00	24	13	35.14	-	-	-
PDXDC2P	0	genome.wustl.edu	37	16	70065818	70065818	+	RNA	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	70065818	70065818	T	G	SNP	PDXDC2P	ENST00000529089	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PDXDC2P	HGNC	ENSG00000196696	100	0	0.00	50	7	12.28	-	-	-
PDXDC2P	0	genome.wustl.edu	37	16	70065819	70065819	+	RNA	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	70065819	70065819	C	A	SNP	PDXDC2P	ENST00000529089	human	ensembl	69_37n	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PDXDC2P	HGNC	ENSG00000196696	100	0	0.00	49	6	10.71	-	-	-
PEAR1	0	genome.wustl.edu	37	1	156883526	156883526	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	156883526	156883526	A	G	SNP	PEAR1	ENST00000292357	human	ensembl	69_37n	+1	known	missense	c.2687	p.N896S	0.004	NULL	pfam_EGF_laminin,superfamily_Growth_fac_rcpt,smart_EGF-like,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	PEAR1	HGNC	ENSG00000187800	42	0	0.00	43	10	18.87	-	-	-
PIK3R5	0	genome.wustl.edu	37	17	8794119	8794119	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	8794119	8794119	A	G	SNP	PIK3R5	ENST00000447110	human	ensembl	69_37n	-1	known	missense	c.593	p.L198P	1.000	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506	59	0	0.00	22	14	38.89	-	-	-
PIWIL3	0	genome.wustl.edu	37	22	25131764	25131764	+	Silent	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	25131764	25131764	G	A	SNP	PIWIL3	ENST00000332271	human	ensembl	69_37n	-1	known	silent	c.1545	p.S515	0.000	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ,superfamily_RNaseH-like_dom,superfamily_PAZ,smart_PAZ,smart_Piwi,pfscan_PAZ,pfscan_Piwi	-	no_errors	PIWIL3	HGNC	ENSG00000184571	70	0	0.00	47	47	50.00	-	-	-
PKD1L1	0	genome.wustl.edu	37	7	47835657	47835657	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	47835657	47835657	C	A	SNP	PKD1L1	ENST00000289672	human	ensembl	69_37n	-1	known	missense	c.8285	p.W2762L	0.061	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_LipOase_LH2,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_LipOase_LH2,pfscan_PKD_dom,pfscan_LipOase_LH2,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	52	0	0.00	43	5	10.42	-	-	-
PLEKHB2	0	genome.wustl.edu	37	2	131890565	131890565	+	Splice_Site	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	131890565	131890565	G	T	SNP	PLEKHB2	ENST00000303908	human	ensembl	69_37n	+1	known	splice_site	c.423+1	e5+1	1.000	-	-	-	no_errors	PLEKHB2	HGNC	ENSG00000115762	48	0	0.00	35	4	10.26	-	-	-
PNPLA1	0	genome.wustl.edu	37	6	36259244	36259244	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	36259244	36259244	G	C	SNP	PNPLA1	ENST00000457797	human	ensembl	69_37n	+1	known	missense	c.353	p.G118A	0.985	superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA1	HGNC	ENSG00000180316	48	0	0.00	44	13	22.81	-	-	-
PNPLA4	0	genome.wustl.edu	37	X	7890132	7890132	+	Missense_Mutation	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	7890132	7890132	T	C	SNP	PNPLA4	ENST00000381042	human	ensembl	69_37n	-1	known	missense	c.188	p.N63S	0.001	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA4	HGNC	ENSG00000006757	59	0	0.00	26	7	21.21	-	-	-
PNPLA7	0	genome.wustl.edu	37	9	140417223	140417223	+	Silent	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	140417223	140417223	T	A	SNP	PNPLA7	ENST00000406427	human	ensembl	69_37n	-1	known	silent	c.834	p.G278	0.992	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653	14	0	0.00	7	10	58.82	-	-	-
POLE	0	genome.wustl.edu	37	12	133240731	133240731	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	133240731	133240731	C	T	SNP	POLE	ENST00000455752	human	ensembl	69_37n	-1	known	silent	c.2598	p.R866	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	38	0	0.00	6	15	71.43	-	-	-
PPFIA1	0	genome.wustl.edu	37	11	70229211	70229211	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	70229211	70229211	A	G	SNP	PPFIA1	ENST00000528853	human	ensembl	69_37n	+1	putative	missense	c.221	p.Y74C	1.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	PPFIA1	HGNC	ENSG00000131626	26	0	0.00	33	4	10.81	-	-	-
PSD	0	genome.wustl.edu	37	10	104163668	104163668	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	104163668	104163668	C	A	SNP	PSD	ENST00000020673	human	ensembl	69_37n	-1	known	missense	c.2775	p.Q925H	0.000	NULL	pfam_Sec7,pfam_Pleckstrin_homology,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915	83	0	0.00	45	8	15.09	-	-	-
PSD2	0	genome.wustl.edu	37	5	139193041	139193041	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	139193041	139193041	C	T	SNP	PSD2	ENST00000274710	human	ensembl	69_37n	+1	known	silent	c.519	p.C173	0.704	NULL	pfam_Sec7,pfam_Pleckstrin_homology,superfamily_Sec7,smart_Sec7,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_Pleckstrin_homology,pfscan_Sec7	-	no_errors	PSD2	HGNC	ENSG00000146005	43	0	0.00	35	6	14.63	-	-	-
QSOX2	0	genome.wustl.edu	37	9	139100961	139100961	+	Silent	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	139100961	139100961	C	A	SNP	QSOX2	ENST00000358701	human	ensembl	69_37n	-1	known	silent	c.1710	p.T570	0.000	NULL	pfam_Evr1_Alr,pfam_Thioredoxin_domain,superfamily_Evr1_Alr,superfamily_Thioredoxin-like_fold	-	no_errors	QSOX2	HGNC	ENSG00000165661	67	0	0.00	15	28	65.12	-	-	-
RAD51AP2	0	genome.wustl.edu	37	2	17698740	17698740	+	Nonsense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	17698740	17698740	T	A	SNP	RAD51AP2	ENST00000399080	human	ensembl	69_37n	-1	known	nonsense	c.943	p.K315*	0.946	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842	81	0	0.00	98	12	10.91	-	-	-
RDH11	0	genome.wustl.edu	37	14	68162412	68162412	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	14	68162412	68162412	C	G	SNP	RDH11	ENST00000381346	human	ensembl	69_37n	-1	known	missense	c.9	p.E3D	0.000	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH11	HGNC	ENSG00000072042	26	0	0.00	13	5	27.78	-	-	-
RIF1	0	genome.wustl.edu	37	2	152266473	152266473	+	Missense_Mutation	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	152266473	152266473	T	C	SNP	RIF1	ENST00000414861	human	ensembl	69_37n	+1	novel	missense	c.4	p.W2R	0.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region	RIF1	HGNC	ENSG00000080345	41	0	0.00	52	6	10.34	-	-	-
RNFT2	0	genome.wustl.edu	37	12	117289613	117289613	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	117289613	117289613	G	C	SNP	RNFT2	ENST00000319176	human	ensembl	69_37n	+1	putative	missense	c.830	p.G277A	0.000	NULL	NULL	-	no_errors	RNFT2	HGNC	ENSG00000135119	88	0	0.00	46	8	14.81	-	-	-
SEMA3D	0	genome.wustl.edu	37	7	84644491	84644491	+	Silent	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	84644491	84644491	G	C	SNP	SEMA3D	ENST00000284136	human	ensembl	69_37n	-1	known	silent	c.1587	p.L529	1.000	superfamily_Semaphorin/CD100_Ag,pfscan_Semaphorin/CD100_Ag	pfam_Semaphorin/CD100_Ag,pfam_Ig_V-set,superfamily_Semaphorin/CD100_Ag,superfamily_Plexin-like_fold,smart_Semaphorin/CD100_Ag,smart_Plexin-like,smart_Ig_sub,pfscan_Semaphorin/CD100_Ag,pfscan_Ig-like	-	no_errors	SEMA3D	HGNC	ENSG00000153993	42	0	0.00	30	7	18.92	-	-	-
SERPINH1	0	genome.wustl.edu	37	11	75280169	75280169	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	75280169	75280169	G	A	SNP	SERPINH1	ENST00000358171	human	ensembl	69_37n	+1	known	missense	c.907	p.A303T	1.000	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	pfam_Sepin_dom,superfamily_Sepin_dom,smart_Sepin_dom	-	no_errors	SERPINH1	HGNC	ENSG00000149257	46	0	0.00	29	4	12.12	-	-	-
SESTD1	0	genome.wustl.edu	37	2	180014054	180014054	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	180014054	180014054	C	T	SNP	SESTD1	ENST00000428443	human	ensembl	69_37n	-1	known	missense	c.551	p.S184N	1.000	NULL	superfamily_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	SESTD1	HGNC	ENSG00000187231	79	0	0.00	76	34	30.91	-	-	-
SHBG	0	genome.wustl.edu	37	17	7534956	7534956	+	Missense_Mutation	SNP	A	A	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	7534956	7534956	A	T	SNP	SHBG	ENST00000380450	human	ensembl	69_37n	+1	known	missense	c.605	p.K202I	0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	SHBG	HGNC	ENSG00000129214	41	0	0.00	28	7	19.44	-	-	-
SLC13A1	0	genome.wustl.edu	37	7	122787318	122787318	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	122787318	122787318	G	A	SNP	SLC13A1	ENST00000194130	human	ensembl	69_37n	-1	known	missense	c.707	p.T236I	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A1	HGNC	ENSG00000081800	116	0	0.00	41	16	28.07	-	-	-
SLC26A9	0	genome.wustl.edu	37	1	205895727	205895727	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	205895727	205895727	A	G	SNP	SLC26A9	ENST00000340781	human	ensembl	69_37n	-1	known	missense	c.1325	p.L442P	1.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502	83	0	0.00	38	26	40.62	-	-	-
SLC28A2	0	genome.wustl.edu	37	15	45564673	45564673	+	RNA	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	15	45564673	45564673	T	C	SNP	SLC28A2	ENST00000560767	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	SLC28A2	HGNC	ENSG00000137860	17	0	0.00	16	7	30.43	-	-	-
SLC41A1	0	genome.wustl.edu	37	1	205760830	205760830	+	Missense_Mutation	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	205760830	205760830	T	G	SNP	SLC41A1	ENST00000367137	human	ensembl	69_37n	-1	known	missense	c.1373	p.Y458S	1.000	pfam_MgtE_Mg_transptr_membr	pfam_MgtE_Mg_transptr_membr	-	no_errors	SLC41A1	HGNC	ENSG00000133065	113	1	0.88	56	29	34.12	-	-	-
SLC4A3	0	genome.wustl.edu	37	2	220495072	220495072	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	220495072	220495072	A	G	SNP	SLC4A3	ENST00000273063	human	ensembl	69_37n	+1	known	missense	c.890	p.K297R	1.000	NULL	pfam_HCO3_transpt_C,pfam_HCO3_transpt_cyt,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923	22	0	0.00	9	3	25.00	-	-	-
SLC5A5	0	genome.wustl.edu	37	19	17983256	17983256	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	19	17983256	17983256	G	C	SNP	SLC5A5	ENST00000222248	human	ensembl	69_37n	+1	known	missense	c.128	p.S43T	0.964	pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A5	HGNC	ENSG00000105641	101	0	0.00	77	9	10.47	-	-	-
SNRNP200	0	genome.wustl.edu	37	2	96952447	96952447	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	96952447	96952447	C	T	SNP	SNRNP200	ENST00000323853	human	ensembl	69_37n	-1	known	missense	c.3808	p.V1270M	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028	49	0	0.00	21	11	34.38	-	-	-
SNX8	0	genome.wustl.edu	37	7	2294716	2294716	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	2294716	2294716	G	A	SNP	SNX8	ENST00000222990	human	ensembl	69_37n	-1	known	missense	c.1373	p.P458L	0.126	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX8	HGNC	ENSG00000106266	133	0	0.00	53	7	11.67	-	-	-
SPON1	0	genome.wustl.edu	37	11	14280846	14280846	+	RNA	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	11	14280846	14280846	T	A	SNP	SPON1	ENST00000310358	human	ensembl	69_37n	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SPON1	HGNC	ENSG00000152268	50	0	0.00	23	9	28.12	-	-	-
SPRED1	0	genome.wustl.edu	37	15	38632020	38632020	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	15	38632020	38632020	G	C	SNP	SPRED1	ENST00000299084	human	ensembl	69_37n	+1	known	missense	c.506	p.R169T	1.000	NULL	pfam_Sprouty,pfam_EVH1,smart_EVH1,pfscan_EVH1	-	no_errors	SPRED1	HGNC	ENSG00000166068	55	0	0.00	18	7	28.00	-	-	-
TBX22	0	genome.wustl.edu	37	X	79279600	79279600	+	Nonsense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	X	79279600	79279600	T	A	SNP	TBX22	ENST00000373294	human	ensembl	69_37n	+1	known	nonsense	c.395	p.L132*	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,prints_TF_T-box,pfscan_TF_T-box	-	no_errors	TBX22	HGNC	ENSG00000122145	106	0	0.00	56	10	15.15	-	-	-
TCF20	0	genome.wustl.edu	37	22	42609249	42609249	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	42609249	42609249	G	C	SNP	TCF20	ENST00000359486	human	ensembl	69_37n	-1	known	missense	c.2063	p.A688G	0.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	50	0	0.00	53	11	17.19	-	-	-
TCP11L2	0	genome.wustl.edu	37	12	106734742	106734742	+	Silent	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	106734742	106734742	T	A	SNP	TCP11L2	ENST00000299045	human	ensembl	69_37n	+1	known	silent	c.1281	p.I427	0.978	pfam_Tcp11	pfam_Tcp11	-	no_errors	TCP11L2	HGNC	ENSG00000166046	39	0	0.00	29	20	40.82	-	-	-
THNSL1	0	genome.wustl.edu	37	10	25314083	25314083	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	25314083	25314083	C	T	SNP	THNSL1	ENST00000376356	human	ensembl	69_37n	+1	known	missense	c.1931	p.A644V	1.000	pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,tigrfam_Thr_synthase	pfam_Shikimate_kinase,pfam_PyrdxlP-dep_enz_bsu,superfamily_PyrdxlP-dep_enz_bsu,prints_Shikimate_kinase,tigrfam_Thr_synthase	-	no_errors	THNSL1	HGNC	ENSG00000185875	46	0	0.00	30	24	44.44	-	-	-
THSD7A	0	genome.wustl.edu	37	7	11486990	11486990	+	Silent	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	7	11486990	11486990	T	G	SNP	THSD7A	ENST00000423059	human	ensembl	69_37n	-1	known	silent	c.2667	p.A889	0.804	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108	55	0	0.00	25	8	24.24	-	-	-
THSD7B	0	genome.wustl.edu	37	2	137988746	137988746	+	Missense_Mutation	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	137988746	137988746	A	G	SNP	THSD7B	ENST00000272643	human	ensembl	69_37n	+1	known	missense	c.1856	p.N619S	0.989	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	50	0	0.00	40	5	11.11	-	-	-
TJP3	0	genome.wustl.edu	37	19	3735625	3735625	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	19	3735625	3735625	G	A	SNP	TJP3	ENST00000262968	human	ensembl	69_37n	+1	known	missense	c.1147	p.E383K	0.901	NULL	pfam_PDZ,pfam_SH3_2,pfam_Guanylate_kin,superfamily_PDZ,superfamily_SH3_domain,smart_PDZ,smart_SH3_domain,smart_Guanylate_kin/L-typ_Ca_channel,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin,prints_ZonOcculS3,prints_ZonOcculdens	-	no_errors	TJP3	HGNC	ENSG00000105289	51	0	0.00	22	13	37.14	-	-	-
TMEM38B	0	genome.wustl.edu	37	9	108536283	108536283	+	Silent	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	108536283	108536283	C	T	SNP	TMEM38B	ENST00000374692	human	ensembl	69_37n	+1	known	silent	c.798	p.G266	0.020	NULL	pfam_TRIC_channel	-	no_errors	TMEM38B	HGNC	ENSG00000095209	50	0	0.00	15	20	57.14	-	-	-
TNRC6A	0	genome.wustl.edu	37	16	24801526	24801526	+	Silent	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	24801526	24801526	A	C	SNP	TNRC6A	ENST00000395799	human	ensembl	69_37n	+1	known	silent	c.1563	p.T521	0.272	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905	41	0	0.00	12	13	52.00	-	-	-
TOP3B	0	genome.wustl.edu	37	22	22313983	22313983	+	Missense_Mutation	SNP	G	G	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	22313983	22313983	G	T	SNP	TOP3B	ENST00000357179	human	ensembl	69_37n	-1	known	missense	c.1780	p.H594N	1.000	superfamily_Topo_IA_core_domain	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	42	0	0.00	36	4	10.00	-	-	-
TP53	0	genome.wustl.edu	37	17	7578403	7578403	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	7578403	7578403	C	T	SNP	TP53	ENST00000269305	human	ensembl	69_37n	-1	known	missense	c.527	p.C176Y	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	27	0	0.00	7	14	66.67	-	-	-
TRAJ50	0	genome.wustl.edu	37	14	22957621	22957621	+	Missense_Mutation	SNP	A	A	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	14	22957621	22957621	A	C	SNP	TRAJ50	ENST00000390487	human	ensembl	69_37n	+1	known	missense	c.41	p.Q14P	0.153	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon	TRAJ50	HGNC	ENSG00000211839	66	0	0.00	29	13	30.95	-	-	-
TRIM2	0	genome.wustl.edu	37	4	154178697	154178697	+	RNA	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	4	154178697	154178697	A	G	SNP	TRIM2	ENST00000502281	human	ensembl	69_37n	+1	putative	rna	NULL	NULL	0.156	-	-	-	no_errors	TRIM2	HGNC	ENSG00000109654	75	0	0.00	29	6	17.14	-	-	-
TRIM41	0	genome.wustl.edu	37	5	180657808	180657808	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	5	180657808	180657808	C	G	SNP	TRIM41	ENST00000315073	human	ensembl	69_37n	+1	known	missense	c.878	p.A293G	1.000	pfam_DUF3631	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,pfam_DUF3631,superfamily_ConA-like_lec_gl,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM41	HGNC	ENSG00000146063	84	0	0.00	20	27	56.25	-	-	-
TYMP	0	genome.wustl.edu	37	22	50967689	50967689	+	Missense_Mutation	SNP	G	G	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	22	50967689	50967689	G	C	SNP	TYMP	ENST00000252029	human	ensembl	69_37n	-1	known	missense	c.293	p.S98W	0.966	pfam_Glycosyl_Trfase_fam3_N_dom,superfamily_Glycosyl_Trfase_fam3_N_dom,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	pfam_Glycosyl_Trfase_fam3,pfam_Glycosyl_Trfase_fam3_N_dom,pfam_PYNP_C,superfamily_Glycosyl_Trfase_fam3,superfamily_PYNP_C,superfamily_Glycosyl_Trfase_fam3_N_dom,smart_PYNP_C,pirsf_Pyrmidine_PPase,tigrfam_Pyrmidine_PPas_bac/euk	-	no_errors	TYMP	HGNC	ENSG00000025708	60	0	0.00	74	16	17.78	-	-	-
UGT1A7	0	genome.wustl.edu	37	2	234590970	234590970	+	Missense_Mutation	SNP	T	T	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	234590970	234590970	T	G	SNP	UGT1A7	ENST00000373426	human	ensembl	69_37n	+1	known	missense	c.387	p.N129K	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A7	HGNC	ENSG00000244122	56	0	0.00	42	5	10.64	-	-	-
UGT1A7	0	genome.wustl.edu	37	2	234590974	234590974	+	Silent	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	234590974	234590974	C	A	SNP	UGT1A7	ENST00000373426	human	ensembl	69_37n	+1	known	silent	c.391	p.R131	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A7	HGNC	ENSG00000244122	56	0	0.00	40	5	11.11	-	-	-
UGT1A7	0	genome.wustl.edu	37	2	234590975	234590975	+	Missense_Mutation	SNP	G	G	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	2	234590975	234590975	G	A	SNP	UGT1A7	ENST00000373426	human	ensembl	69_37n	+1	known	missense	c.392	p.R131Q	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A7	HGNC	ENSG00000244122	56	0	0.00	40	5	11.11	-	-	-
VPS39	0	genome.wustl.edu	37	15	42459590	42459590	+	Splice_Site	SNP	A	A	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	15	42459590	42459590	A	G	SNP	VPS39	ENST00000348544	human	ensembl	69_37n	-1	known	splice_site	c.1410+2	e14+2	1.000	-	-	-	no_errors	VPS39	HGNC	ENSG00000166887	55	0	0	11	11	50	-	-	-
WDR66	0	genome.wustl.edu	37	12	122437845	122437845	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	12	122437845	122437845	C	T	SNP	WDR66	ENST00000288912	human	ensembl	69_37n	+1	known	missense	c.3230	p.T1077I	0.124	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023	29	0	0.00	15	8	34.78	-	-	-
XYLB	0	genome.wustl.edu	37	3	38390113	38390113	+	Missense_Mutation	SNP	C	C	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	3	38390113	38390113	C	A	SNP	XYLB	ENST00000207870	human	ensembl	69_37n	+1	known	missense	c.130	p.P44T	1.000	pfam_Carb_kinase_FGGY_N	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N	-	no_errors	XYLB	HGNC	ENSG00000093217	127	0	0.00	63	20	24.10	-	-	-
ZFYVE27	0	genome.wustl.edu	37	10	99509969	99509969	+	RNA	SNP	T	T	C			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	10	99509969	99509969	T	C	SNP	ZFYVE27	ENST00000481956	human	ensembl	69_37n	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZFYVE27	HGNC	ENSG00000155256	47	0	0.00	32	4	11.11	-	-	-
ZMPSTE24	0	genome.wustl.edu	37	1	40723983	40723983	+	Missense_Mutation	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	1	40723983	40723983	C	G	SNP	ZMPSTE24	ENST00000372759	human	ensembl	69_37n	+1	known	missense	c.40	p.P14A	1.000	NULL	pfam_Peptidase_M48	-	no_errors	ZMPSTE24	HGNC	ENSG00000084073	33	0	0.00	38	10	20.83	-	-	-
ZNF169	0	genome.wustl.edu	37	9	97062923	97062923	+	Silent	SNP	C	C	G			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	9	97062923	97062923	C	G	SNP	ZNF169	ENST00000395395	human	ensembl	69_37n	+1	known	silent	c.1083	p.L361	0.042	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787	51	0	0.00	23	7	23.33	-	-	-
ZNF311	0	genome.wustl.edu	37	6	28963898	28963898	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	6	28963898	28963898	C	T	SNP	ZNF311	ENST00000377179	human	ensembl	69_37n	-1	known	missense	c.881	p.R294Q	0.864	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF311	HGNC	ENSG00000197935	90	0	0.00	65	15	18.75	-	-	-
ZNF597	0	genome.wustl.edu	37	16	3486435	3486435	+	Missense_Mutation	SNP	T	T	A			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	16	3486435	3486435	T	A	SNP	ZNF597	ENST00000301744	human	ensembl	69_37n	-1	known	missense	c.1264	p.N422Y	0.010	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF597	HGNC	ENSG00000167981	62	0	0.00	56	9	13.85	-	-	-
ZNF93	0	genome.wustl.edu	37	19	20044531	20044531	+	Missense_Mutation	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	19	20044531	20044531	C	T	SNP	ZNF93	ENST00000343769	human	ensembl	69_37n	+1	known	missense	c.767	p.P256L	0.945	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF93	HGNC	ENSG00000184635	52	0	0.00	16	15	48.39	-	-	-
ZZEF1	0	genome.wustl.edu	37	17	4046260	4046260	+	RNA	SNP	C	C	T			TCGA-GI-A2C9-01A-11D-A21Q-09	TCGA-GI-A2C9-11A-22D-A21Q-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5dbf3203-ce73-41e4-bf9a-32fc856f73f5	e0d54a00-8d0b-4a09-bf35-75183818d3ed	17	4046260	4046260	C	T	SNP	ZZEF1	ENST00000574474	human	ensembl	69_37n	-1	known	rna	NULL	NULL	0.826	-	-	-	no_errors	ZZEF1	HGNC	ENSG00000074755	10	0	0.00	1	5	83.33	-	-	-
