Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
HIC2	23119	broad.mit.edu	37	22	21800664	21800664	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr22:21800664C>T	ENST00000443632.2	+	2	1852	c.1480C>T	c.(1480-1482)Ccc>Tcc	p.P494S	HIC2_ENST00000407464.2_Missense_Mutation_p.P494S|HIC2_ENST00000407598.2_Missense_Mutation_p.P494S			Q96JB3	HIC2_HUMAN	hypermethylated in cancer 2	494					negative regulation of transcription, DNA-dependent|transcription, DNA-dependent	focal adhesion|nucleus	DNA binding|protein C-terminus binding|zinc ion binding			NS(1)|endometrium(4)|large_intestine(1)|lung(7)|ovary(1)|skin(1)|upper_aerodigestive_tract(1)	16	Melanoma(16;0.000465)|Ovarian(15;0.00438)|Colorectal(54;0.0968)	Lung SC(17;0.0262)|all_lung(157;0.205)				CCTGTCAGCACCCAGTGCGGC	0.642000													20	24					0	0	1	0	0
UBBP4	0	broad.mit.edu	37	17	21731144	21731144	+	Missense_Mutation	SNP	T	T	G	rs149119138	by1000genomes	TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr17:21731144T>G	ENST00000584755.1	+	2	843	c.446T>G	c.(445-447)cTg>cGg	p.L149R	UBBP4_ENST00000578713.1_Missense_Mutation_p.L149R|UBBP4_ENST00000584398.1_3'UTR|UBBP4_ENST00000583708.1_3'UTR														p.L149R(18)		endometrium(9)|kidney(4)|lung(4)|prostate(3)|urinary_tract(4)	24						GTCCTGCGTCTGAGAGGTGGT	0.542000													5	95					0	0	1	0	0
MAML3	55534	broad.mit.edu	37	4	140811099	140811099	+	Splice_Site	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr4:140811099C>T	ENST00000398940.1	-	1	107	c.108_splice	c.e1+1	p.Q36_splice	MAML3_ENST00000327122.5_Silent_p.Q341Q|MAML3_ENST00000509479.2_Silent_p.Q497Q			Q96JK9	MAML3_HUMAN	mastermind-like 3 (Drosophila)	497					Notch signaling pathway|positive regulation of transcription from RNA polymerase II promoter|transcription, DNA-dependent	nuclear speck	transcription coactivator activity	p.Q497Q(2)		breast(1)|endometrium(7)|kidney(2)|large_intestine(1)|lung(9)|ovary(1)|prostate(2)|urinary_tract(2)	25	all_hematologic(180;0.162)					gctgctgctgctgctgctgct	0.542000													3	45					0	0	1	0	0
LIPJ	142910	broad.mit.edu	37	10	90365406	90365406	+	Missense_Mutation	SNP	A	A	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr10:90365406A>T	ENST00000371939.3	+	10	1126	c.812A>T	c.(811-813)cAt>cTt	p.H271L		NM_001010939.2	NP_001010939.2	Q5W064	LIPJ_HUMAN	lipase, family member J	271					lipid catabolic process		hydrolase activity			large_intestine(4)|lung(4)|ovary(1)	9		all_cancers(4;2.79e-10)|Prostate(4;1.68e-15)|all_epithelial(4;1.43e-09)|Colorectal(252;0.0381)|Breast(4;0.141)|Melanoma(5;0.2)|all_hematologic(4;0.222)		Colorectal(12;1.02e-05)|COAD - Colon adenocarcinoma(12;1.54e-05)		AATTCTACTCATTTGAAAGCT	0.338000													4	80					0	0	1	0	0
KCNT2	343450	broad.mit.edu	37	1	196254823	196254823	+	Silent	SNP	C	C	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr1:196254823C>A	ENST00000367433.5	-	22	2690	c.2589G>T	c.(2587-2589)gtG>gtT	p.V863V	KCNT2_ENST00000451324.2_3'UTR|KCNT2_ENST00000294725.8_Silent_p.V887V|KCNT2_ENST00000498426.1_5'UTR|KCNT2_ENST00000367431.4_Silent_p.V813V			Q6UVM3	KCNT2_HUMAN	potassium channel, subfamily T, member 2	887						voltage-gated potassium channel complex	ATP binding|calcium-activated potassium channel activity|voltage-gated potassium channel activity			NS(1)|breast(4)|endometrium(5)|haematopoietic_and_lymphoid_tissue(4)|kidney(3)|large_intestine(16)|lung(43)|ovary(5)|pancreas(1)|prostate(1)|skin(11)|stomach(2)|upper_aerodigestive_tract(1)	97						TGATGCTAAACACCCTCCCAG	0.353000													4	43					0.150653	0.150653	1	1	0
NBPF1	55672	broad.mit.edu	37	1	16918653	16918653	+	Splice_Site	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr1:16918653C>T	ENST00000430580.2	-	6	853		c.e6+1			NM_017940.3	NP_060410.2	Q3BBV0	NBPF1_HUMAN	neuroblastoma breakpoint family, member 1							cytoplasm									UCEC - Uterine corpus endometrioid carcinoma (279;0.00459)|BRCA - Breast invasive adenocarcinoma(304;7.52e-06)|COAD - Colon adenocarcinoma(227;1.05e-05)|Kidney(64;0.00016)|KIRC - Kidney renal clear cell carcinoma(64;0.00258)|STAD - Stomach adenocarcinoma(196;0.00644)|READ - Rectum adenocarcinoma(331;0.0649)|Lung(427;0.179)		TCTTAACTTACTGTTGTGAAA	0.418000													6	39					0	0	1	0	0
PLXNA3	55558	broad.mit.edu	37	X	153695647	153695647	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chrX:153695647C>T	ENST00000369682.3	+	19	3449	c.3274C>T	c.(3274-3276)Cgg>Tgg	p.R1092W		NM_017514.3	NP_059984.2	P51805	PLXA3_HUMAN	plexin A3	1092	IPT/TIG 3.				axon guidance	integral to membrane|intracellular|plasma membrane	transmembrane receptor activity			breast(2)|central_nervous_system(2)|cervix(2)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(2)|lung(26)|ovary(2)|prostate(1)|upper_aerodigestive_tract(4)|urinary_tract(1)	48	all_cancers(53;5.05e-16)|all_epithelial(53;1.87e-10)|all_lung(58;1.84e-07)|Lung NSC(58;5.84e-07)|all_hematologic(71;2.45e-06)|Acute lymphoblastic leukemia(192;6.56e-05)|Breast(217;0.176)					GCCCCAGCCTCGGGCGCAAGG	0.617000													33	41					0	0	1	0	0
NXF3	56000	broad.mit.edu	37	X	102339403	102339403	+	Missense_Mutation	SNP	G	G	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chrX:102339403G>A	ENST00000395065.3	-	3	319	c.218C>T	c.(217-219)cCc>cTc	p.P73L	NXF3_ENST00000425644.1_5'UTR|NXF3_ENST00000425463.2_5'UTR	NM_022052.1	NP_071335.1	Q9H4D5	NXF3_HUMAN	nuclear RNA export factor 3	73						cytoplasm|nuclear RNA export factor complex	nucleocytoplasmic transporter activity|nucleotide binding|protein binding			NS(1)|central_nervous_system(1)|cervix(1)|kidney(1)|large_intestine(2)|lung(15)|ovary(1)|prostate(1)|skin(2)|upper_aerodigestive_tract(1)	26						CCGATTATAGGGTGAAATAGT	0.438000													12	98					0	0	1	0	0
ZNF184	7738	broad.mit.edu	37	6	27419847	27419847	+	Silent	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr6:27419847C>T	ENST00000211936.6	-	6	1775	c.1491G>A	c.(1489-1491)acG>acA	p.T497T	ZNF184_ENST00000377419.1_Silent_p.T497T	NM_007149.2	NP_009080.2	Q99676	ZN184_HUMAN	zinc finger protein 184	497					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			breast(1)|cervix(1)|endometrium(4)|kidney(9)|large_intestine(13)|lung(14)|ovary(1)|skin(1)|upper_aerodigestive_tract(3)|urinary_tract(1)	48						GCTTTTCTCTCGTGTGAATTC	0.393000													4	66					0	0	1	0	0
ZZEF1	23140	broad.mit.edu	37	17	3981268	3981268	+	Silent	SNP	G	G	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr17:3981268G>A	ENST00000381638.2	-	19	3022	c.2898C>T	c.(2896-2898)tcC>tcT	p.S966S	ZZEF1_ENST00000574474.1_5'UTR	NM_015113.3	NP_055928.3	O43149	ZZEF1_HUMAN	zinc finger, ZZ-type with EF-hand domain 1	966							calcium ion binding|zinc ion binding			central_nervous_system(1)|cervix(2)|endometrium(11)|haematopoietic_and_lymphoid_tissue(1)|kidney(9)|large_intestine(17)|lung(19)|ovary(3)|pancreas(1)|prostate(3)|skin(8)|stomach(1)|upper_aerodigestive_tract(5)|urinary_tract(3)	84						TGCCTTGGACGGACCAGAACA	0.547000													3	45					0	0	1	0	0
MUC21	394263	broad.mit.edu	37	6	30954121	30954121	+	Missense_Mutation	SNP	G	G	A	rs137862032		TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr6:30954121G>A	ENST00000376296.3	+	2	410	c.169G>A	c.(169-171)Gtc>Atc	p.V57I	MUC21_ENST00000486149.2_5'UTR	NM_001010909.2	NP_001010909.2	Q5SSG8	MUC21_HUMAN	mucin 21, cell surface associated	57	28 X 15 AA approximate tandem repeats.|Ser-rich.					integral to membrane|plasma membrane				NS(4)|breast(1)|central_nervous_system(2)|endometrium(1)|kidney(1)|large_intestine(7)|lung(11)|ovary(3)|prostate(4)|skin(4)|upper_aerodigestive_tract(3)|urinary_tract(1)	42						CTCCAGTGGGGTCAGCACAGC	0.567000													9	166					0	0	1	0	0
SLC15A2	6565	broad.mit.edu	37	3	121647372	121647372	+	Silent	SNP	T	T	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr3:121647372T>A	ENST00000489711.1	+	15	1699	c.1311T>A	c.(1309-1311)tcT>tcA	p.S437S	SLC15A2_ENST00000465060.1_3'UTR|SLC15A2_ENST00000295605.2_Silent_p.S406S	NM_021082.3	NP_066568.3	Q16348	S15A2_HUMAN	solute carrier family 15 (oligopeptide transporter), member 2	437					protein transport	integral to plasma membrane	peptide:hydrogen symporter activity|protein binding			NS(1)|endometrium(1)|kidney(4)|large_intestine(5)|lung(17)|skin(6)|upper_aerodigestive_tract(2)	36				GBM - Glioblastoma multiforme(114;0.0967)	Cefadroxil(DB01140)	AAAACAATTCTCTGTTGATAG	0.428000													5	89					0	0	1	0	0
SLC13A5	284111	broad.mit.edu	37	17	6589585	6589585	+	Missense_Mutation	SNP	C	C	T			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr17:6589585C>T	ENST00000433363.2	-	12	1881	c.1648G>A	c.(1648-1650)Gcc>Acc	p.A550T	SLC13A5_ENST00000381074.4_Missense_Mutation_p.A507T|SLC13A5_ENST00000573648.1_Missense_Mutation_p.A504T|SLC13A5_ENST00000293800.6_Missense_Mutation_p.A533T	NM_177550.3	NP_808218.1	Q86YT5	S13A5_HUMAN	solute carrier family 13 (sodium-dependent citrate transporter), member 5	550						integral to membrane	citrate transmembrane transporter activity			breast(1)|cervix(1)|endometrium(3)|kidney(1)|large_intestine(2)|lung(9)|prostate(5)|skin(3)|urinary_tract(1)	26						TCAAATATGGCCCGTCCCCAG	0.473000													3	48					0	0	1	0	0
CD180	4064	broad.mit.edu	37	5	66479625	66479625	+	Missense_Mutation	SNP	T	T	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr5:66479625T>A	ENST00000256447.4	-	3	1203	c.1046A>T	c.(1045-1047)cAc>cTc	p.H349L		NM_005582.2	NP_005573.2	Q99467	CD180_HUMAN	CD180 molecule	349					inflammatory response|innate immune response	integral to membrane|plasma membrane	receptor activity			cervix(1)|endometrium(2)|kidney(7)|large_intestine(12)|liver(1)|lung(8)|ovary(1)|stomach(2)	34		Lung NSC(167;4.94e-05)|Prostate(74;0.00601)|Ovarian(174;0.0654)|Breast(144;0.198)|Colorectal(97;0.234)		Lung(70;0.0046)		GATGTAGAGGTGTGTAAGGGA	0.423000													17	144					0	0	1	0	0
FAHD2A	51011	broad.mit.edu	37	2	96072903	96072903	+	Missense_Mutation	SNP	C	C	A			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr2:96072903C>A	ENST00000233379.4	+	3	613	c.460C>A	c.(460-462)Cag>Aag	p.Q154K	FAHD2A_ENST00000447036.1_Missense_Mutation_p.Q154K	NM_016044.2	NP_057128.2	Q96GK7	FAH2A_HUMAN	fumarylacetoacetate hydrolase domain containing 2A	154							hydrolase activity|metal ion binding			breast(1)|cervix(1)|endometrium(1)|kidney(1)|lung(3)|ovary(1)	8						ACCACAGAGCCAGGTCAGTGT	0.582000													4	64					1.23904e-05	1.39392e-05	1	1	0
BAGE2	85319	broad.mit.edu	37	21	11098863	11098863	+	RNA	SNP	A	A	G	rs75318310	by1000genomes	TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr21:11098863A>G	ENST00000470054.1	-	0	62									B melanoma antigen family, member 2															Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		ccagcctccaactcccccttc	0.627000													4	28					0	0	1	0	0
HSD17B7P2	0	broad.mit.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G	rs2257765		TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr10:38654432A>G	ENST00000494540.1	+	0	599					NR_003086.1																						TCATCTCGCAATGCAAGGAAA	0.453000													3	57					0	0	1	0	0
TTN	7273	broad.mit.edu	37	2	179397305	179397305	+	Missense_Mutation	SNP	C	C	G			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr2:179397305C>G	ENST00000589042.1	-	358	104261	c.104037G>C	c.(104035-104037)gaG>gaC	p.E34679D	TTN_ENST00000342992.6_Missense_Mutation_p.E32111D|TTN-AS1_ENST00000592689.1_RNA|TTN-AS1_ENST00000442329.2_RNA|TTN-AS1_ENST00000592600.1_RNA|TTN-AS1_ENST00000591332.1_RNA|TTN-AS1_ENST00000586452.1_RNA|TTN_ENST00000591111.1_Missense_Mutation_p.E33038D|TTN-AS1_ENST00000588716.1_RNA|TTN-AS1_ENST00000590807.1_RNA|TTN-AS1_ENST00000586831.1_RNA|TTN-AS1_ENST00000419746.1_RNA|TTN-AS1_ENST00000588804.1_RNA|TTN-AS1_ENST00000592182.1_RNA|TTN-AS1_ENST00000585487.1_RNA|TTN-AS1_ENST00000431259.2_RNA|TTN-AS1_ENST00000592750.1_RNA|TTN-AS1_ENST00000592630.1_RNA|TTN-AS1_ENST00000450692.2_RNA|TTN_ENST00000359218.5_Missense_Mutation_p.E25739D|TTN_ENST00000342175.6_Missense_Mutation_p.E25806D|TTN-AS1_ENST00000585358.1_RNA|TTN_ENST00000460472.2_Missense_Mutation_p.E25614D|TTN-AS1_ENST00000589391.1_RNA|TTN-AS1_ENST00000589842.1_RNA|TTN-AS1_ENST00000586707.1_RNA|TTN-AS1_ENST00000590040.1_RNA|TTN-AS1_ENST00000589434.1_RNA|TTN-AS1_ENST00000591867.1_RNA|TTN-AS1_ENST00000585451.1_RNA|TTN-AS1_ENST00000588257.1_RNA|TTN-AS1_ENST00000592836.1_RNA|TTN-AS1_ENST00000456053.1_RNA|TTN-AS1_ENST00000591466.1_RNA|TTN-AS1_ENST00000588244.1_RNA	NM_001267550.1	NP_001254479.1	Q8WZ42	TITIN_HUMAN	titin	33038							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			NS(24)|autonomic_ganglia(1)|breast(64)|central_nervous_system(14)|cervix(14)|endometrium(96)|haematopoietic_and_lymphoid_tissue(16)|kidney(91)|large_intestine(303)|liver(1)|lung(595)|ovary(58)|pancreas(17)|prostate(38)|skin(60)|stomach(29)|upper_aerodigestive_tract(1)|urinary_tract(26)	1448			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			GACGCAGCCTCTCTTCCTCTG	0.458000													5	139					0	0	1	0	0
LACE1	246269	broad.mit.edu	37	6	108840904	108840904	+	Missense_Mutation	SNP	G	G	A	rs141756676	byFrequency	TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr6:108840904G>A	ENST00000368977.4	+	12	1394	c.1208G>A	c.(1207-1209)cGt>cAt	p.R403H		NM_145315.3	NP_660358.2	Q8WV93	LACE1_HUMAN	lactation elevated 1	403							ATP binding			NS(1)|breast(1)|central_nervous_system(1)|endometrium(1)|large_intestine(6)|lung(4)|upper_aerodigestive_tract(1)	15		all_cancers(87;1.5e-07)|Acute lymphoblastic leukemia(125;2.66e-08)|all_hematologic(75;1.13e-06)|all_epithelial(87;6.79e-05)|Colorectal(196;0.0294)|all_lung(197;0.0486)|Lung SC(18;0.152)		BRCA - Breast invasive adenocarcinoma(108;0.00179)|Epithelial(106;0.0024)|all cancers(137;0.00379)|OV - Ovarian serous cystadenocarcinoma(136;0.0118)		TTTCAGGTGCGTATAATTTGC	0.353000													20	52					0	0	1	0	0
PRAMEF11	440560	broad.mit.edu	37	1	12885289	12885289	+	Silent	SNP	G	G	T	rs148273194	by1000genomes	TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr1:12885289G>T	ENST00000535591.1	-	4	1017	c.822C>A	c.(820-822)ctC>ctA	p.L274L		NM_001146344.1	NP_001139816.1	O60813	PRA11_HUMAN	PRAME family member 11	274								p.L274L(3)		NS(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|lung(7)|pancreas(2)|skin(4)|urinary_tract(1)	27						GGCACTGGGAGAGATGCTTCA	0.458000													8	381					2.17888e-05	2.35319e-05	1	1	0
CAND2	23066	broad.mit.edu	37	3	12851594	12851594	+	Frame_Shift_Del	DEL	C	C	-			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr3:12851594delC	ENST00000456430.2	+	5	569	c.528delC	c.(526-528)ctfs	p.L177fs	CAND2_ENST00000295989.5_Frame_Shift_Del_p.L84fs|CAND2_ENST00000466558.1_3'UTR	NM_001162499.1	NP_001155971.1	O75155	CAND2_HUMAN	cullin-associated and neddylation-dissociated 2 (putative)	177					positive regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	protein binding			breast(3)|central_nervous_system(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(10)|lung(8)|pancreas(1)|prostate(1)|skin(5)|upper_aerodigestive_tract(1)|urinary_tract(1)	37						ACGCCAGCCTCCTGCACTGTC	0.751													2	4	---	---	---	---					
TMEM184A	202915	broad.mit.edu	37	7	1586653	1586654	+	In_Frame_Ins	INS	-	-	GCC	rs112463195	by1000genomes	TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr7:1586653_1586654insGCC	ENST00000297477.5	-	9	1492_1493	c.1176_1177insGGC	c.(1174-1179)ggccgg>ggGGCccgg	p.392_393GR>GAR		NM_001097620.1	NP_001091089.1	Q6ZMB5	T184A_HUMAN	transmembrane protein 184A	392						integral to membrane				endometrium(1)|large_intestine(1)|lung(6)|upper_aerodigestive_tract(3)|urinary_tract(1)	12		Ovarian(82;0.0253)		UCEC - Uterine corpus endometrioid carcinoma (27;0.0178)|OV - Ovarian serous cystadenocarcinoma(56;5.88e-15)		CTCCCGCCGGAGCCGCCGCTGG	0.708													10	7	---	---	---	---					
RP11-394A14.2	0	broad.mit.edu	37	13	64407210	64407211	+	RNA	INS	-	-	TACTGTCAG			TCGA-QR-A707-01A-11D-A35D-08	TCGA-QR-A707-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	1451182a-ba33-4966-aad0-066d77006065	682d0a33-6110-4bc9-94c6-a233330fbbc9	g.chr13:64407210_64407211insTACTGTCAG	ENST00000607822.1	-	0	2159																											AGACCTTTATATAATTGCCAAA	0.366													9	200	---	---	---	---					
