Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
GABRA6	2559	broad.mit.edu	37	5	161116048	161116048	+	Missense_Mutation	SNP	A	A	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr5:161116048A>T	ENST00000523217.1	+	4	531	c.289A>T	c.(289-291)Atg>Ttg	p.M97L	GABRA6_ENST00000274545.5_Missense_Mutation_p.M107L|RP11-348M17.2_ENST00000521984.1_RNA	NM_000811.2	NP_000802.2	Q16445	GBRA6_HUMAN	gamma-aminobutyric acid (GABA) A receptor, alpha 6	107					gamma-aminobutyric acid signaling pathway	cell junction|chloride channel complex|integral to plasma membrane|postsynaptic membrane	benzodiazepine receptor activity|chloride channel activity			breast(1)|central_nervous_system(2)|endometrium(6)|large_intestine(9)|liver(2)|lung(22)|ovary(7)|skin(6)|urinary_tract(2)	57	Renal(175;0.00259)	Medulloblastoma(196;0.0208)|all_neural(177;0.0672)	Kidney(164;7.83e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)		Alprazolam(DB00404)|Ethchlorvynol(DB00189)|Flunitrazepam(DB01544)|Flurazepam(DB00690)|Lorazepam(DB00186)|Meprobamate(DB00371)|Midazolam(DB00683)	GAATAATTTGATGGTCAGTAA	0.413000										TCGA Ovarian(5;0.080)			4	102					0	0	1	0	0
EPAS1	2034	broad.mit.edu	37	2	46607403	46607403	+	Missense_Mutation	SNP	C	C	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr2:46607403C>T	ENST00000263734.3	+	12	2102	c.1592C>T	c.(1591-1593)cCc>cTc	p.P531L		NM_001430.4	NP_001421.2	Q99814	EPAS1_HUMAN	endothelial PAS domain protein 1	531	NTAD.				angiogenesis|myoblast cell fate commitment|positive regulation of transcription from RNA polymerase II promoter|response to hypoxia	transcription factor complex	histone acetyltransferase binding|protein heterodimerization activity|sequence-specific enhancer binding RNA polymerase II transcription factor activity|signal transducer activity|transcription coactivator activity|transcription factor binding			NS(1)|breast(2)|central_nervous_system(1)|cervix(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(7)|liver(2)|lung(11)|ovary(2)|prostate(1)|skin(3)|upper_aerodigestive_tract(1)|urinary_tract(1)	39		all_hematologic(82;0.152)|Acute lymphoblastic leukemia(82;0.18)	LUSC - Lung squamous cell carcinoma(58;0.151)			ACACTGGCACCCTATATCCCC	0.592000													42	76					0	0	1	0	0
PPP2R2C	5522	broad.mit.edu	37	4	6380190	6380190	+	Missense_Mutation	SNP	T	T	C			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr4:6380190T>C	ENST00000335585.5	-	3	301	c.278A>G	c.(277-279)aAc>aGc	p.N93S	PPP2R2C_ENST00000507294.1_Missense_Mutation_p.N86S|PPP2R2C_ENST00000382599.4_Missense_Mutation_p.N93S|PPP2R2C_ENST00000314348.8_Intron|PPP2R2C_ENST00000515571.1_Missense_Mutation_p.N76S|PPP2R2C_ENST00000506140.1_Missense_Mutation_p.N86S	NM_181876.2	NP_870991.1	Q9Y2T4	2ABG_HUMAN	protein phosphatase 2, regulatory subunit B, gamma	93					signal transduction	protein phosphatase type 2A complex	protein phosphatase type 2A regulator activity			central_nervous_system(2)|endometrium(2)|kidney(2)|large_intestine(7)|lung(7)|ovary(2)|prostate(2)|skin(3)|urinary_tract(1)	28						CTTGATCTTGTTGATCTTCTC	0.602000													4	59					0	0	1	0	0
ANKRD36	375248	broad.mit.edu	37	2	97869931	97869931	+	Missense_Mutation	SNP	A	A	T	rs76309140		TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr2:97869931A>T	ENST00000420699.2	+	50	3236	c.2992A>T	c.(2992-2994)Aca>Tca	p.T998S	ANKRD36_ENST00000461153.2_Missense_Mutation_p.T998S	NM_001164315.1	NP_001157787.1	A6QL64	AN36A_HUMAN	ankyrin repeat domain 36	998								p.T998S(13)		endometrium(9)|kidney(5)|liver(1)|lung(3)|ovary(2)|prostate(2)|upper_aerodigestive_tract(1)	23						CATTCAGGCTACAAGTGATGA	0.289000													4	31					0	0	1	0	0
PRB3	5544	broad.mit.edu	37	12	11420458	11420458	+	RNA	SNP	C	C	T	rs28435564		TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr12:11420458C>T	ENST00000381842.3	-	0	642				PRB3_ENST00000440870.3_RNA|PRB3_ENST00000538488.1_RNA|PRB3_ENST00000279573.6_RNA	NM_006249.4	NP_006240.4	Q04118	PRB3_HUMAN	proline-rich protein BstNI subfamily 3							extracellular region	Gram-negative bacterial cell surface binding			breast(2)|endometrium(1)|kidney(2)|large_intestine(1)|lung(13)|ovary(1)|skin(5)	25			OV - Ovarian serous cystadenocarcinoma(49;0.201)			CTTTCCTGGACGAGGTGGGGG	0.612000													5	10					0	0	1	0	0
PKHD1	5314	broad.mit.edu	37	6	51771115	51771115	+	Missense_Mutation	SNP	C	C	A			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr6:51771115C>A	ENST00000371117.3	-	41	6981	c.6706G>T	c.(6706-6708)Gtg>Ttg	p.V2236L	PKHD1_ENST00000340994.4_Missense_Mutation_p.V2236L	NM_138694.3	NP_619639.3	P08F94	PKHD1_HUMAN	polycystic kidney and hepatic disease 1 (autosomal recessive)	2236					cell-cell adhesion|cilium assembly|homeostatic process|kidney development|negative regulation of cellular component movement	anchored to external side of plasma membrane|apical plasma membrane|integral to membrane|microtubule basal body	protein binding|receptor activity			NS(1)|autonomic_ganglia(1)|breast(8)|central_nervous_system(5)|cervix(1)|endometrium(16)|haematopoietic_and_lymphoid_tissue(4)|kidney(11)|large_intestine(59)|lung(139)|ovary(16)|prostate(8)|skin(20)|soft_tissue(1)|stomach(2)|upper_aerodigestive_tract(7)|urinary_tract(5)	304	Lung NSC(77;0.0605)					GAGTTCCTCACTGTGCAGCCC	0.438000													3	59					0.115264	0.115264	1	1	0
NLRP8	126205	broad.mit.edu	37	19	56466123	56466123	+	Silent	SNP	C	C	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr19:56466123C>T	ENST00000291971.3	+	3	770	c.699C>T	c.(697-699)taC>taT	p.Y233Y	NLRP8_ENST00000590542.1_Silent_p.Y233Y	NM_176811.2	NP_789781.2	Q86W28	NALP8_HUMAN	NLR family, pyrin domain containing 8	233	NACHT.					cytoplasm	ATP binding	p.Y233Y(1)		breast(4)|central_nervous_system(2)|haematopoietic_and_lymphoid_tissue(2)|kidney(1)|large_intestine(14)|ovary(5)|skin(2)|stomach(3)|upper_aerodigestive_tract(2)	35		Colorectal(82;0.000147)|Ovarian(87;0.17)		GBM - Glioblastoma multiforme(193;0.0695)		ACAAGTTCTACGCCCACAAGC	0.527000													13	65					0	0	1	0	0
KCNJ12	3768	broad.mit.edu	37	17	21318660	21318660	+	Silent	SNP	C	C	T	rs148939916	byFrequency	TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr17:21318660C>T	ENST00000583088.1	+	3	901	c.6C>T	c.(4-6)acC>acT	p.T2T	KCNJ12_ENST00000331718.5_Silent_p.T2T	NM_021012.4	NP_066292.2			potassium inwardly-rectifying channel, subfamily J, member 12											NS(1)|breast(4)|endometrium(4)|kidney(1)|large_intestine(5)|lung(39)|ovary(5)|skin(8)|stomach(3)	70				Colorectal(15;0.0183)|COAD - Colon adenocarcinoma(3;0.0732)		CCGGGATGACCGCGGCCAGCC	0.697000										Prostate(3;0.18)			4	26					0	0	1	0	0
WDR62	284403	broad.mit.edu	37	19	36579971	36579971	+	Silent	SNP	G	G	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr19:36579971G>T	ENST00000401500.2	+	14	1835	c.1800G>T	c.(1798-1800)ggG>ggT	p.G600G	WDR62_ENST00000270301.7_Silent_p.G600G	NM_001083961.1|NM_173636.4	NP_001077430.1|NP_775907.4	O43379	WDR62_HUMAN	WD repeat domain 62	600					cerebral cortex development	nucleus				cervix(1)|endometrium(8)|kidney(2)|large_intestine(8)|lung(15)|prostate(4)|stomach(2)|urinary_tract(3)	43	Esophageal squamous(110;0.162)		LUSC - Lung squamous cell carcinoma(66;0.06)			TCAGCTGTGGGGCTGACAAGA	0.627000													6	10					0.00116845	0.00121925	1	1	0
PAPSS1	9061	broad.mit.edu	37	4	108535505	108535505	+	Missense_Mutation	SNP	C	C	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr4:108535505C>T	ENST00000265174.4	-	12	2047	c.1775G>A	c.(1774-1776)cGc>cAc	p.R592H		NM_005443.4	NP_005434.4	O43252	PAPS1_HUMAN	3'-phosphoadenosine 5'-phosphosulfate synthase 1	592					3'-phosphoadenosine 5'-phosphosulfate biosynthetic process|skeletal system development|sulfate assimilation|xenobiotic metabolic process	cytosol	adenylylsulfate kinase activity|ATP binding|sulfate adenylyltransferase (ATP) activity			NS(1)|endometrium(2)|kidney(5)|large_intestine(2)|lung(5)|ovary(1)	16		Hepatocellular(203;0.217)		OV - Ovarian serous cystadenocarcinoma(123;5.49e-05)		AGCAAGTTTGCGCATTCGTGT	0.383000													3	71					0	0	1	0	0
CD200R1L	344807	broad.mit.edu	37	3	112546338	112546338	+	Silent	SNP	A	A	G			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr3:112546338A>G	ENST00000488794.1	-	5	832	c.243T>C	c.(241-243)tcT>tcC	p.S81S	CD200R1L_ENST00000398214.1_Silent_p.S102S|CD200R1L_ENST00000448932.1_Silent_p.S81S			Q6Q8B3	MO2R2_HUMAN	CD200 receptor 1-like	102	Ig-like V-type.					integral to membrane	receptor activity			breast(2)|central_nervous_system(1)|endometrium(1)|large_intestine(4)|lung(6)|ovary(1)|prostate(2)|urinary_tract(2)	19						GATCAGGTCTAGAGACCCAGG	0.468000													4	126					0	0	1	0	0
AC024560.3	0	broad.mit.edu	37	3	197348674	197348674	+	RNA	SNP	A	A	G	rs144273946	by1000genomes	TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr3:197348674A>G	ENST00000418868.1	-	0	585					NR_003266.2																						GGCTCTGTCCACCAAATGCAC	0.478000													6	93					0	0	1	0	0
PARP1	142	broad.mit.edu	37	1	226570832	226570832	+	Missense_Mutation	SNP	C	C	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr1:226570832C>T	ENST00000366794.5	-	8	1207	c.1064G>A	c.(1063-1065)cGt>cAt	p.R355H		NM_001618.3	NP_001609.2	P09874	PARP1_HUMAN	poly (ADP-ribose) polymerase 1	355					cellular response to insulin stimulus|protein ADP-ribosylation|regulation of transcription, DNA-dependent|transcription from RNA polymerase II promoter	nuclear envelope|nucleolus|transcription factor complex	DNA binding|identical protein binding|NAD+ ADP-ribosyltransferase activity|protein N-terminus binding|transcription factor binding|zinc ion binding			breast(2)|endometrium(4)|kidney(4)|large_intestine(8)|lung(15)|ovary(3)|prostate(2)|skin(4)|upper_aerodigestive_tract(2)	44	Breast(184;0.133)			GBM - Glioblastoma multiforme(131;0.0531)		GGGGAATATACGGTCCTGTTT	0.498000								Poly(ADP-ribose) polymerase (PARP) enzymes that bind to DNA					4	266					0	0	1	0	0
CD200R1L	344807	broad.mit.edu	37	3	112546360	112546360	+	Missense_Mutation	SNP	A	A	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr3:112546360A>T	ENST00000488794.1	-	5	810	c.221T>A	c.(220-222)gTt>gAt	p.V74D	CD200R1L_ENST00000398214.1_Missense_Mutation_p.V95D|CD200R1L_ENST00000448932.1_Missense_Mutation_p.V74D			Q6Q8B3	MO2R2_HUMAN	CD200 receptor 1-like	95	Ig-like V-type.					integral to membrane	receptor activity			breast(2)|central_nervous_system(1)|endometrium(1)|large_intestine(4)|lung(6)|ovary(1)|prostate(2)|urinary_tract(2)	19						TATTCTCTCAACAGTACAGTT	0.448000													4	121					0	0	1	0	0
AGXT2	64902	broad.mit.edu	37	5	35035400	35035400	+	Missense_Mutation	SNP	C	C	T			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr5:35035400C>T	ENST00000231420.6	-	5	708	c.508G>A	c.(508-510)Ggc>Agc	p.G170S		NM_031900.3	NP_114106.1	Q9BYV1	AGT2_HUMAN	alanine--glyoxylate aminotransferase 2	170					glyoxylate metabolic process|pyrimidine base metabolic process|pyrimidine nucleoside catabolic process	mitochondrial matrix	(R)-3-amino-2-methylpropionate-pyruvate transaminase activity|alanine-glyoxylate transaminase activity|pyridoxal phosphate binding			NS(1)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(8)|lung(18)|ovary(3)|prostate(1)|skin(2)|upper_aerodigestive_tract(2)	41	all_lung(31;4.52e-05)		COAD - Colon adenocarcinoma(61;0.174)|Colorectal(62;0.229)	GBM - Glioblastoma multiforme(108;0.181)	Glycine(DB00145)|L-Alanine(DB00160)|Pyridoxal Phosphate(DB00114)|Pyruvic acid(DB00119)	GCTTCTGAGCCACTGTTCACC	0.433000													29	56					0	0	1	0	0
WDR11	55717	broad.mit.edu	37	10	122662677	122662677	+	Missense_Mutation	SNP	C	C	G			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr10:122662677C>G	ENST00000263461.6	+	23	3110	c.2864C>G	c.(2863-2865)cCt>cGt	p.P955R	WDR11_ENST00000604509.1_3'UTR	NM_018117.11	NP_060587.8	Q9BZH6	WDR11_HUMAN	WD repeat domain 11	955						integral to membrane				breast(1)|central_nervous_system(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(11)|lung(9)|prostate(2)|skin(2)|stomach(5)	38						GAAGCTGCTCCTCGAGACAAA	0.498000													13	35					0	0	1	0	0
MTMR10	54893	broad.mit.edu	37	15	31251152	31251152	+	Silent	SNP	G	G	C			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr15:31251152G>C	ENST00000435680.1	-	9	946	c.849C>G	c.(847-849)ctC>ctG	p.L283L	MTMR10_ENST00000563714.1_Silent_p.L201L|MTMR10_ENST00000314404.8_Silent_p.L35L|MTMR10_ENST00000425768.1_3'UTR	NM_017762.2	NP_060232.2	Q9NXD2	MTMRA_HUMAN	myotubularin related protein 10	283	Myotubularin phosphatase.						phosphatase activity			autonomic_ganglia(1)|breast(1)|endometrium(1)|kidney(2)|large_intestine(2)|ovary(1)|upper_aerodigestive_tract(1)	9		all_lung(180;2.81e-11)		all cancers(64;7.26e-15)|Epithelial(43;7.2e-11)|GBM - Glioblastoma multiforme(186;0.000158)|BRCA - Breast invasive adenocarcinoma(123;0.00426)|Lung(196;0.174)		TCCAGCACCAGAGCTAGGGGA	0.478000													29	57					0	0	1	0	0
ZXDC	79364	broad.mit.edu	37	3	126178522	126178522	+	Frame_Shift_Del	DEL	T	T	-			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr3:126178522delT	ENST00000389709.3	-	7	2239	c.2186delA	c.(2185-2187)agfs	p.K729fs		NM_025112.4	NP_079388.3	Q2QGD7	ZXDC_HUMAN	ZXD family zinc finger C	729					positive regulation of transcription, DNA-dependent	nucleus	C2H2 zinc finger domain binding|identical protein binding|LRR domain binding|nucleic acid binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(2)|lung(9)|ovary(1)	17				GBM - Glioblastoma multiforme(114;0.155)		TCCTCTCTGCTTTTTTTCCTT	0.522													7	356	---	---	---	---					
TRGC1	0	broad.mit.edu	37	7	38301855	38301856	+	RNA	DEL	GT	GT	-			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr7:38301855_38301856delGT	ENST00000443402.2	-	0	330					NM_001003799.1|NM_001003806.1	NP_001003799.1|NP_001003806.1																					TCAATTGTTCGTGTGTGTGTGT	0.356													7	142	---	---	---	---					
STAG3L2	0	broad.mit.edu	37	7	74300804	74300804	+	RNA	DEL	A	A	-			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr7:74300804delA	ENST00000423186.1	-	0	499							P0CL84	ST3L2_HUMAN								nucleus	binding			breast(1)|central_nervous_system(1)|large_intestine(1)|lung(1)|pancreas(1)	5						CTTCATACTTAAAAAAAAAAA	0.458													3	5	---	---	---	---					
RP11-946L20.4	0	broad.mit.edu	37	8	112239267	112239267	+	RNA	DEL	A	A	-			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr8:112239267delA	ENST00000522778.1	-	0	122																											AAGCCTAATGAATATTGTCCG	0.398													2	4	---	---	---	---					
MEDAG	84935	broad.mit.edu	37	13	31480851	31480852	+	Frame_Shift_Ins	INS	-	-	G			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr13:31480851_31480852insG	ENST00000380482.4	+	1	524_525	c.199_200insG	c.(199-201)gggfs	p.G67fs	TEX26-AS1_ENST00000592950.1_RNA|TEX26-AS1_ENST00000593246.1_RNA|TEX26-AS1_ENST00000585870.1_RNA|TEX26-AS1_ENST00000588726.1_RNA|TEX26-AS1_ENST00000590344.1_RNA	NM_032849.3	NP_116238.2			mesenteric estrogen-dependent adipogenesis																		ggcggcggcgcgggggggcTTC	0.738													2	4	---	---	---	---					
RP13-329D4.3	0	broad.mit.edu	37	20	26113543	26113543	+	RNA	DEL	A	A	-			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr20:26113543delA	ENST00000416563.1	-	0	250																											TCTTTGCCTTAACAACATTAT	0.363													2	4	---	---	---	---					
COL18A1	80781	broad.mit.edu	37	21	46906873	46906874	+	Frame_Shift_Ins	INS	-	-	G			TCGA-QT-A7U0-01A-11D-A35D-08	TCGA-QT-A7U0-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	7599c42d-e42b-4a22-bf08-ed78437a1652	f19ac3ac-2b5b-474c-8259-dd93c42aef05	g.chr21:46906873_46906874insG	ENST00000359759.4	+	15	3066_3067	c.3045_3046insG	c.(3043-3048)ccggccfs	p.A1016fs	COL18A1_ENST00000400337.2_Frame_Shift_Ins_p.A601fs|COL18A1_ENST00000355480.5_Frame_Shift_Ins_p.A781fs			P39060	COIA1_HUMAN	collagen, type XVIII, alpha 1	1016	Triple-helical region 3 (COL3).				cell adhesion|negative regulation of cell proliferation|organ morphogenesis|visual perception	collagen|extracellular space	extracellular matrix structural constituent|metal ion binding|protein binding			breast(1)|central_nervous_system(2)|endometrium(4)|kidney(2)|large_intestine(4)|lung(8)|ovary(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	25				Colorectal(79;0.0157)|READ - Rectum adenocarcinoma(84;0.0929)		CTGGGCCCCCTGGGCCCCCAGG	0.728													2	4	---	---	---	---					
