Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
C9orf123	0	broad.mit.edu	37	9	7799665	7799665	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr9:7799665C>T	ENST00000358227.4	-	1	402	c.70G>A	c.(70-72)Gcc>Acc	p.A24T	C9orf123_ENST00000484082.1_Intron	NM_033428.1	NP_219500.1	Q96GE9	CI123_HUMAN		24						integral to membrane				lung(1)	1		all_cancers(3;0.0539)|Lung NSC(3;3.36e-05)|all_lung(3;0.000156)|all_epithelial(3;0.0356)		GBM - Glioblastoma multiforme(50;0.0561)		GCAGGTTTGGCGGGCGCGGCG	0.657000													3	28					0	0	1	0	0
EML5	161436	broad.mit.edu	37	14	89206879	89206879	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr14:89206879C>T	ENST00000554922.1	-	5	811	c.563G>A	c.(562-564)cGa>cAa	p.R188Q	EML5_ENST00000380664.5_Missense_Mutation_p.R188Q|EML5_ENST00000352093.5_Missense_Mutation_p.R188Q	NM_183387.2	NP_899243.1	Q05BV3	EMAL5_HUMAN	echinoderm microtubule associated protein like 5	188						cytoplasm|microtubule				breast(1)|endometrium(3)|kidney(4)|large_intestine(17)|lung(14)|ovary(3)|pancreas(1)|prostate(4)|upper_aerodigestive_tract(2)|urinary_tract(1)	50						AAAGACACCTCGTTTTGGGGT	0.368000													5	87					0	0	1	0	0
ALMS1	7840	broad.mit.edu	37	2	73677777	73677777	+	Missense_Mutation	SNP	A	A	G			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr2:73677777A>G	ENST00000264448.6	+	8	4231	c.4120A>G	c.(4120-4122)Act>Gct	p.T1374A	ALMS1_ENST00000409009.1_Missense_Mutation_p.T1332A|ALMS1_ENST00000377715.1_Missense_Mutation_p.T1374A	NM_015120.4	NP_055935.4	Q8TCU4	ALMS1_HUMAN	Alstrom syndrome 1	1374	34 X 47 AA approximate tandem repeat.				G2/M transition of mitotic cell cycle	centrosome|cilium|cytosol|microtubule basal body|spindle pole		p.T1374A(1)		breast(4)|endometrium(14)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(31)|lung(68)|ovary(4)|pancreas(4)|prostate(3)|skin(8)|upper_aerodigestive_tract(1)|urinary_tract(2)	147						TGGCACACCAACTGTAACCTC	0.443000													4	144					0	0	1	0	0
RP11-114H24.7	0	broad.mit.edu	37	15	78211548	78211548	+	RNA	SNP	T	T	C			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr15:78211548T>C	ENST00000565869.1	+	0	111				RP11-114H24.2_ENST00000567226.1_RNA																							CCACCTGGGATTGGAGCTTTC	0.562000													5	94					0	0	1	0	0
SLC35A4	113829	broad.mit.edu	37	5	139947373	139947373	+	Nonsense_Mutation	SNP	G	G	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr5:139947373G>T	ENST00000514199.1	+	2	2305	c.619G>T	c.(619-621)Gag>Tag	p.E207*	SLC35A4_ENST00000323146.3_Nonsense_Mutation_p.E207*|APBB3_ENST00000507279.1_Intron			Q96G79	S35A4_HUMAN	solute carrier family 35, member A4	207	Leu-rich.					Golgi membrane|integral to membrane	sugar:hydrogen symporter activity			endometrium(4)|kidney(2)|large_intestine(3)|lung(4)	13			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			AGTGTACACAGAGCTGCTCAT	0.577000													39	54					6.2361e-21	6.50724e-21	1	1	0
RP11-423O2.5	0	broad.mit.edu	37	1	142803543	142803543	+	RNA	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr1:142803543C>T	ENST00000423385.1	-	0	1422																											TGTTGGAATTCCTGATGAATC	0.269000													5	158					0	0	1	0	0
DEPDC7	91614	broad.mit.edu	37	11	33047366	33047366	+	Missense_Mutation	SNP	C	C	G			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr11:33047366C>G	ENST00000311388.3	+	2	584	c.208C>G	c.(208-210)Cta>Gta	p.L70V	DEPDC7_ENST00000241051.3_Missense_Mutation_p.L79V	NM_139160.2	NP_631899.2	Q96QD5	DEPD7_HUMAN	DEP domain containing 7	79	DEP.				regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol	GTPase activator activity			endometrium(2)|large_intestine(4)|lung(8)|ovary(1)|skin(2)	17						TTTTTCTCACCTAATTCAGAA	0.393000													7	185					0	0	1	0	0
CD300LG	146894	broad.mit.edu	37	17	41926251	41926251	+	Silent	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr17:41926251C>T	ENST00000317310.4	+	2	410	c.369C>T	c.(367-369)ttC>ttT	p.F123F	CD300LG_ENST00000539718.1_Silent_p.F123F|CD300LG_ENST00000293396.8_Silent_p.F123F|CD300LG_ENST00000588884.1_Silent_p.F123F|CD300LG_ENST00000377203.4_Silent_p.F123F|CD300LG_ENST00000586233.1_Silent_p.F123F	NM_145273.3	NP_660316.2	Q6UXG3	CLM9_HUMAN	CD300 molecule-like family member g	123						apical plasma membrane|basolateral plasma membrane|integral to membrane|multivesicular body membrane	receptor activity			central_nervous_system(1)|endometrium(2)|kidney(5)|large_intestine(2)|lung(5)|skin(4)	19		Breast(137;0.0199)		BRCA - Breast invasive adenocarcinoma(366;0.115)		TCTCTCTGTTCGTCTTTCCAG	0.557000													20	28					0	0	1	0	0
TIMELESS	8914	broad.mit.edu	37	12	56811930	56811930	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr12:56811930C>T	ENST00000229201.4	-	27	3593	c.3439G>A	c.(3439-3441)Gca>Aca	p.A1147T	TIMELESS_ENST00000554616.1_Missense_Mutation_p.A645T|TIMELESS_ENST00000553532.1_Missense_Mutation_p.A1148T	NM_003920.3	NP_003911.2	Q9UNS1	TIM_HUMAN	timeless circadian clock	1148					cell division|circadian rhythm|detection of abiotic stimulus|mitosis|morphogenesis of an epithelium|negative regulation of transcription, DNA-dependent|regulation of S phase|response to DNA damage stimulus|transcription, DNA-dependent	nuclear chromatin				NS(1)|breast(2)|cervix(3)|endometrium(3)|kidney(3)|large_intestine(8)|lung(14)|ovary(7)|pancreas(2)|prostate(3)|skin(1)|stomach(1)|urinary_tract(1)	49						TCTGGGGATGCCAGGCCCGCT	0.542000													5	435					0	0	1	0	0
EPAS1	2034	broad.mit.edu	37	2	46607406	46607406	+	Missense_Mutation	SNP	A	A	G			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr2:46607406A>G	ENST00000263734.3	+	12	2105	c.1595A>G	c.(1594-1596)tAt>tGt	p.Y532C		NM_001430.4	NP_001421.2	Q99814	EPAS1_HUMAN	endothelial PAS domain protein 1	532	NTAD.				angiogenesis|myoblast cell fate commitment|positive regulation of transcription from RNA polymerase II promoter|response to hypoxia	transcription factor complex	histone acetyltransferase binding|protein heterodimerization activity|sequence-specific enhancer binding RNA polymerase II transcription factor activity|signal transducer activity|transcription coactivator activity|transcription factor binding			NS(1)|breast(2)|central_nervous_system(1)|cervix(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(7)|liver(2)|lung(11)|ovary(2)|prostate(1)|skin(3)|upper_aerodigestive_tract(1)|urinary_tract(1)	39		all_hematologic(82;0.152)|Acute lymphoblastic leukemia(82;0.18)	LUSC - Lung squamous cell carcinoma(58;0.151)			CTGGCACCCTATATCCCCATG	0.587000													68	65					0	0	1	0	0
IL16	3603	broad.mit.edu	37	15	81591746	81591746	+	Silent	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr15:81591746C>T	ENST00000394660.2	+	14	2439	c.2079C>T	c.(2077-2079)caC>caT	p.H693H	IL16_ENST00000394652.2_5'UTR|IL16_ENST00000560230.1_Intron|IL16_ENST00000302987.4_Silent_p.H693H	NM_001172128.1|NM_172217.3	NP_001165599.1|NP_757366.2	Q14005	IL16_HUMAN	interleukin 16	693					immune response|interspecies interaction between organisms|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|extracellular space|nucleus|plasma membrane	cytokine activity			NS(1)|autonomic_ganglia(1)|breast(3)|central_nervous_system(1)|cervix(1)|endometrium(5)|kidney(5)|large_intestine(12)|lung(20)|ovary(3)|skin(3)|stomach(1)|urinary_tract(1)	57						CGATAAAACACCCACTGCTTA	0.438000													100	165					0	0	1	0	0
FANCC	2176	broad.mit.edu	37	9	97864024	97864024	+	Nonsense_Mutation	SNP	G	G	A	rs104886457		TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr9:97864024G>A	ENST00000289081.3	-	15	1896	c.1642C>T	c.(1642-1644)Cga>Tga	p.R548*	FANCC_ENST00000375305.1_Nonsense_Mutation_p.R548*	NM_000136.2	NP_000127.2	Q00597	FANCC_HUMAN	Fanconi anemia, complementation group C	548					protein complex assembly	cytosol|nucleoplasm	protein binding			kidney(1)|skin(1)|upper_aerodigestive_tract(1)	3		Acute lymphoblastic leukemia(62;0.138)				AGGAGCTCTCGGGCCAGTTTT	0.547000			"""D, Mis, N, F, S"""			"""AML, leukemia"""		Involved in tolerance or repair of DNA crosslinks	Fanconi Anemia				12	17					0	0	1	0	0
ETV1	2115	broad.mit.edu	37	7	13975516	13975516	+	Missense_Mutation	SNP	T	T	C			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr7:13975516T>C	ENST00000343495.5	-	7	1055	c.317A>G	c.(316-318)tAt>tGt	p.Y106C	ETV1_ENST00000420159.2_Missense_Mutation_p.Y66C|ETV1_ENST00000403527.1_Missense_Mutation_p.Y84C|ETV1_ENST00000399357.3_Intron|ETV1_ENST00000405218.2_Missense_Mutation_p.Y124C|ETV1_ENST00000476720.2_5'UTR|ETV1_ENST00000403685.1_Missense_Mutation_p.Y106C|ETV1_ENST00000242066.5_Missense_Mutation_p.Y106C|ETV1_ENST00000405358.4_Missense_Mutation_p.Y138C|ETV1_ENST00000430479.1_Missense_Mutation_p.Y124C|ETV1_ENST00000405192.2_Missense_Mutation_p.Y124C			P50549	ETV1_HUMAN	ets variant 1	124					transcription from RNA polymerase II promoter	nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity		TMPRSS2/ETV1(34)|ACSL3_ENST00000357430/ETV1(2)|EWSR1/ETV1(7)|KLK2/ETV1(3)|SLC45A3/ETV1(3)|HNRNPA2B1/ETV1(8)	breast(1)|central_nervous_system(1)|endometrium(1)|kidney(1)|large_intestine(9)|lung(15)|ovary(1)|skin(1)|upper_aerodigestive_tract(1)	31						CTTCTGATCATAGGCACTACC	0.443000			T	"""EWSR1, TMPRSS2, SLC45A3, C15orf21, HNRNPA2B1. ACSL3"""	"""Ewing sarcoma, prostate"""								3	43					0	0	1	0	0
SQRDL	58472	broad.mit.edu	37	15	45951173	45951173	+	Missense_Mutation	SNP	T	T	A			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr15:45951173T>A	ENST00000260324.7	+	2	438	c.52T>A	c.(52-54)Tgc>Agc	p.C18S	RP11-96O20.4_ENST00000564080.1_Missense_Mutation_p.C18S|SQRDL_ENST00000568606.1_Missense_Mutation_p.C18S	NM_021199.2	NP_067022.1	Q9Y6N5	SQRD_HUMAN	sulfide quinone reductase-like (yeast)	18							oxidoreductase activity			central_nervous_system(1)|endometrium(1)|kidney(1)|large_intestine(1)|lung(4)|ovary(1)|prostate(2)	11		Lung NSC(122;0.000117)|all_lung(180;0.000737)|Melanoma(134;0.0417)		all cancers(107;5.89e-18)|GBM - Glioblastoma multiforme(94;1.21e-06)|COAD - Colon adenocarcinoma(120;0.17)|Colorectal(133;0.188)		GCTCTTTGCCTGCCTGCTCAG	0.647000													6	4					0	0	1	0	0
SLC30A5	64924	broad.mit.edu	37	5	68412389	68412389	+	Missense_Mutation	SNP	G	G	C			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr5:68412389G>C	ENST00000396591.3	+	10	1851	c.1241G>C	c.(1240-1242)aGt>aCt	p.S414T	CTC-498J12.3_ENST00000504129.1_RNA	NM_022902.4	NP_075053.2	Q8TAD4	ZNT5_HUMAN	solute carrier family 30 (zinc transporter), member 5	414					cellular zinc ion homeostasis|cobalt ion transport|regulation of proton transport|response to zinc ion	apical plasma membrane|Golgi apparatus|integral to plasma membrane|membrane fraction|secretory granule membrane	zinc ion binding|zinc ion transmembrane transporter activity			breast(3)|central_nervous_system(1)|endometrium(1)|kidney(3)|large_intestine(6)|lung(6)|ovary(1)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	25		Lung NSC(167;0.000986)|Prostate(74;0.00809)|Colorectal(97;0.0508)|Ovarian(174;0.16)		OV - Ovarian serous cystadenocarcinoma(47;1.24e-56)|Epithelial(20;1.12e-52)|all cancers(19;2.63e-48)|Lung(70;0.0177)		CTTGAGGAGAGTGACTCTAGG	0.333000													14	45					0	0	1	0	0
RARG	5916	broad.mit.edu	37	12	53609167	53609167	+	Missense_Mutation	SNP	C	C	T			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr12:53609167C>T	ENST00000425354.2	-	5	872	c.385G>A	c.(385-387)Gac>Aac	p.D129N	RARG_ENST00000394426.1_Missense_Mutation_p.D129N|RARG_ENST00000338561.5_Missense_Mutation_p.D118N|RARG_ENST00000327550.3_Missense_Mutation_p.D57N|RARG_ENST00000543726.1_Missense_Mutation_p.D107N|RARG_ENST00000543762.1_5'UTR	NM_000966.5	NP_000957.1	P13631	RARG_HUMAN	retinoic acid receptor, gamma	129					canonical Wnt receptor signaling pathway|embryonic eye morphogenesis|embryonic hindlimb morphogenesis|negative regulation of cell proliferation|negative regulation of transcription from RNA polymerase II promoter|positive regulation of apoptosis|positive regulation of transcription from RNA polymerase II promoter|regulation of cell size|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor|response to retinoic acid	integral to membrane|transcription factor complex	retinoic acid receptor activity|retinoid X receptor binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|steroid hormone receptor activity|zinc ion binding			breast(3)|endometrium(3)|kidney(1)|large_intestine(6)|lung(3)|ovary(1)|prostate(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	20					Acitretin(DB00459)|Adapalene(DB00210)|Alitretinoin(DB00523)|Etretinate(DB00926)|Tazarotene(DB00799)|Tretinoin(DB00755)	CAGTTTTTGTCGCGGTGACAC	0.537000													4	199					0	0	1	0	0
HERC2P2	0	broad.mit.edu	37	15	23299146	23299147	+	RNA	INS	-	-	A			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr15:23299146_23299147insA	ENST00000560464.1	-	0	4510																											TACATTCAAAGAAAAAAAAAAA	0.317													3	3	---	---	---	---					
SLC43A2	124935	broad.mit.edu	37	17	1531078	1531078	+	Frame_Shift_Del	DEL	G	G	-			TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr17:1531078delG	ENST00000571650.1	-	2	397	c.91delC	c.(91-93)tgfs	p.L31fs	SLC43A2_ENST00000382147.4_Frame_Shift_Del_p.L31fs|SLC43A2_ENST00000301335.4_Frame_Shift_Del_p.L31fs			Q8N370	LAT4_HUMAN	solute carrier family 43 (amino acid system L transporter), member 2	31					cellular nitrogen compound metabolic process|ion transport	integral to membrane|plasma membrane				endometrium(4)|large_intestine(4)|liver(1)|lung(2)|upper_aerodigestive_tract(1)	12				UCEC - Uterine corpus endometrioid carcinoma (25;0.0883)		CCCCAGCCCAGGAGGACTGCC	0.672													2	4	---	---	---	---					
WDR81	124997	broad.mit.edu	37	17	1631341	1631343	+	In_Frame_Del	DEL	GAG	GAG	-	rs66598941		TCGA-RW-A68D-01A-11D-A35D-08	TCGA-RW-A68D-10A-01D-A35B-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	f81b6d24-ffdc-4d48-bce5-bca9de8c1939	8ee15795-2e6c-4e56-a9e5-5e280ac8c57c	g.chr17:1631341_1631343delGAG	ENST00000409644.1	+	1	3088_3090	c.3088_3090delGAG	c.(3088-3090)del	p.E1033del	WDR81_ENST00000446363.1_Intron|RP11-961A15.1_ENST00000576540.1_RNA|WDR81_ENST00000437219.2_Intron|WDR81_ENST00000419248.1_Intron|WDR81_ENST00000309182.5_5'UTR	NM_001163809.1	NP_001157281.1	B3KXU1	B3KXU1_HUMAN	WD repeat domain 81	305										cervix(1)|endometrium(1)|kidney(3)|lung(6)|ovary(2)|prostate(2)|skin(1)	16				UCEC - Uterine corpus endometrioid carcinoma (25;0.0822)		AGGGGCTGCTGAGGAGGAGGAGA	0.695													6	4	---	---	---	---					
