Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
DNAH8	1769	broad.mit.edu	37	6	38841074	38841074	+	Silent	SNP	C	C	T			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr6:38841074C>T	ENST00000359357.3	+	50	7145	c.6891C>T	c.(6889-6891)gtC>gtT	p.V2297V	DNAH8_ENST00000441566.1_Silent_p.V2261V|DNAH8_ENST00000449981.2_Silent_p.V2514V					dynein, axonemal, heavy chain 8											NS(7)|breast(9)|central_nervous_system(4)|cervix(1)|endometrium(12)|haematopoietic_and_lymphoid_tissue(3)|kidney(16)|large_intestine(44)|liver(4)|lung(101)|ovary(7)|pancreas(2)|prostate(8)|skin(28)|stomach(4)|upper_aerodigestive_tract(6)|urinary_tract(4)	260						ATGAGAAAGTCTTTGAAGATA	0.368000													5	95					0	0	1	0	0
LPCAT2	54947	broad.mit.edu	37	16	55579653	55579653	+	Missense_Mutation	SNP	C	C	T			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr16:55579653C>T	ENST00000262134.5	+	9	1043	c.859C>T	c.(859-861)Cca>Tca	p.P287S		NM_017839.4	NP_060309.2	Q7L5N7	PCAT2_HUMAN	lysophosphatidylcholine acyltransferase 2	287					cellular membrane organization|platelet activating factor biosynthetic process	endoplasmic reticulum membrane|Golgi membrane|Golgi stack|integral to membrane	1-acylglycerophosphocholine O-acyltransferase activity|1-alkylglycerophosphocholine O-acetyltransferase activity|calcium ion binding			endometrium(2)|kidney(1)|large_intestine(3)|lung(5)|prostate(1)	12						TCAGTTTATGCCAGTTCAAGT	0.289000													4	115					0	0	1	0	0
RPAIN	84268	broad.mit.edu	37	17	5331589	5331589	+	Missense_Mutation	SNP	C	C	A			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr17:5331589C>A	ENST00000405578.4	+	6	699	c.688C>A	c.(688-690)Cca>Aca	p.P230T	RPAIN_ENST00000574003.1_3'UTR|RPAIN_ENST00000536255.2_Intron|RPAIN_ENST00000381208.5_Intron|RPAIN_ENST00000381209.3_Intron|RPAIN_ENST00000327154.6_Intron|CTC-524C5.2_ENST00000575890.1_RNA	NM_001160243.1	NP_001153715.1	Q86UA6	RIP_HUMAN	RPA interacting protein	0					DNA recombination|DNA repair|DNA-dependent DNA replication|protein import into nucleus|response to UV	cytoplasm|nucleolus|PML body	metal ion binding|protein complex binding			breast(1)|kidney(1)|large_intestine(2)|lung(1)|prostate(1)	6						GGTTTTATTCCCACCTTGATA	0.408000													3	16					1	1	1	1	0
CDC27	996	broad.mit.edu	37	17	45219678	45219678	+	Missense_Mutation	SNP	A	A	G			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr17:45219678A>G	ENST00000066544.3	-	11	1388	c.1295T>C	c.(1294-1296)tTg>tCg	p.L432S	CDC27_ENST00000446365.2_Missense_Mutation_p.L371S|CDC27_ENST00000531206.1_Missense_Mutation_p.L438S|CDC27_ENST00000527547.1_Missense_Mutation_p.L432S	NM_001114091.1|NM_001256.3	NP_001107563.1|NP_001247.3	P30260	CDC27_HUMAN	cell division cycle 27	432					anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process|cell proliferation|mitotic cell cycle spindle assembly checkpoint|mitotic metaphase/anaphase transition|negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|protein K11-linked ubiquitination	anaphase-promoting complex|centrosome|cytosol|nucleoplasm|spindle microtubule	protein phosphatase binding	p.L438S(1)|p.L432S(1)		NS(1)|breast(5)|central_nervous_system(3)|cervix(1)|endometrium(2)|kidney(17)|large_intestine(18)|lung(11)|ovary(5)|pancreas(1)|prostate(19)|skin(5)|upper_aerodigestive_tract(2)	90						GGAAGAGTCCAATTTTGTAAT	0.343000													3	27					0	0	1	0	0
FFAR2	2867	broad.mit.edu	37	19	35940790	35940790	+	Silent	SNP	G	G	C			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr19:35940790G>C	ENST00000599180.1	+	2	254	c.174G>C	c.(172-174)ctG>ctC	p.L58L	FFAR2_ENST00000601590.1_Intron|FFAR2_ENST00000246549.2_Silent_p.L58L			O15552	FFAR2_HUMAN	free fatty acid receptor 2	58						integral to plasma membrane	G-protein coupled receptor activity|lipid binding			NS(1)|breast(1)|central_nervous_system(1)|endometrium(3)|kidney(1)|large_intestine(7)|lung(6)|skin(1)|urinary_tract(1)	22	all_lung(56;1.89e-08)|Lung NSC(56;2.9e-08)|Esophageal squamous(110;0.162)		LUSC - Lung squamous cell carcinoma(66;0.0724)			ACCTCCTCCTGCTGCTGCTGC	0.647000													3	34					0	0	1	0	0
NBPF10	100132406	broad.mit.edu	37	1	145367739	145367739	+	Silent	SNP	A	A	G	rs146714035	by1000genomes	TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr1:145367739A>G	ENST00000342960.5	+	83	10370	c.10335A>G	c.(10333-10335)aaA>aaG	p.K3445K	NBPF10_ENST00000369338.1_Intron|NBPF10_ENST00000369339.2_Intron	NM_001039703.4	NP_001034792.4	A6NDV3	A6NDV3_HUMAN	neuroblastoma breakpoint family, member 10	3445								p.K3445K(4)		NS(3)|breast(1)|central_nervous_system(3)|endometrium(12)|kidney(23)|lung(15)|ovary(1)|prostate(7)|skin(6)|urinary_tract(2)	73	all_hematologic(923;0.032)			Colorectal(1306;1.36e-07)|KIRC - Kidney renal clear cell carcinoma(1967;0.00258)		ggaaggggaaaaaaagaaggg	0.413000													4	108					0	0	1	0	0
KRT71	112802	broad.mit.edu	37	12	52943841	52943841	+	Missense_Mutation	SNP	G	G	A			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr12:52943841G>A	ENST00000267119.5	-	2	697	c.628C>T	c.(628-630)Cgg>Tgg	p.R210W		NM_033448.2	NP_258259.1	Q3SY84	K2C71_HUMAN	keratin 71	210	Coil 1B.|Rod.			R -> Q (in Ref. 5; AAI03919).			structural molecule activity			breast(1)|cervix(1)|endometrium(2)|kidney(1)|large_intestine(5)|lung(9)|ovary(1)|skin(1)|urinary_tract(1)	22				BRCA - Breast invasive adenocarcinoma(357;0.194)		ACTACGTCCCGCACATTCCTC	0.622000													4	111					0	0	1	0	0
FRG1B	0	broad.mit.edu	37	20	29625947	29625947	+	Missense_Mutation	SNP	T	T	C			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr20:29625947T>C	ENST00000278882.3	+	5	571	c.191T>C	c.(190-192)aTt>aCt	p.I64T	FRG1B_ENST00000439954.2_Missense_Mutation_p.I69T|FRG1B_ENST00000358464.4_Missense_Mutation_p.I64T														p.I64T(4)		endometrium(10)|kidney(21)|lung(3)|pancreas(1)|prostate(9)|urinary_tract(9)	53						TCAGATGCAATTGGACCAAGA	0.343000													4	104					0	0	1	0	0
HRAS	3265	broad.mit.edu	37	11	533875	533875	+	Missense_Mutation	SNP	G	G	T	rs28933406		TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr11:533875G>T	ENST00000417302.1	-	3	368	c.181C>A	c.(181-183)Cag>Aag	p.Q61K	HRAS_ENST00000397594.1_Missense_Mutation_p.Q61K|HRAS_ENST00000451590.1_Missense_Mutation_p.Q61K|HRAS_ENST00000311189.7_Missense_Mutation_p.Q61K|HRAS_ENST00000468682.2_5'UTR|HRAS_ENST00000397596.2_Missense_Mutation_p.Q61K	NM_176795.3	NP_789765.1	P01112	RASH_HUMAN	Harvey rat sarcoma viral oncogene homolog	61			Q -> K (in follicular thyroid carcinoma samples; somatic mutation; increases transformation of cultured cell lines; dbSNP:rs28933406).|Q -> L (in melanoma; strongly reduced GTP hydrolysis in the presence of RAF1; increases transformation of cultured cell lines).		activation of MAPKK activity|axon guidance|blood coagulation|cell cycle arrest|cellular senescence|epidermal growth factor receptor signaling pathway|insulin receptor signaling pathway|leukocyte migration|mitotic cell cycle G1/S transition checkpoint|negative regulation of cell proliferation|nerve growth factor receptor signaling pathway|organ morphogenesis|positive regulation of DNA replication|positive regulation of epithelial cell proliferation|Ras protein signal transduction|synaptic transmission	cytosol|Golgi membrane|plasma membrane	GTP binding|GTPase activity|protein C-terminus binding	p.Q61K(61)|p.Q61R(1)|p.Q61E(1)		adrenal_gland(1)|bone(3)|breast(7)|cervix(23)|endometrium(4)|haematopoietic_and_lymphoid_tissue(12)|kidney(1)|large_intestine(2)|liver(1)|lung(16)|oesophagus(2)|penis(2)|pituitary(10)|prostate(31)|salivary_gland(24)|skin(184)|soft_tissue(38)|stomach(14)|testis(5)|thymus(1)|thyroid(173)|upper_aerodigestive_tract(122)|urinary_tract(225)	901		all_cancers(49;4.37e-09)|all_epithelial(84;2.09e-06)|Breast(177;0.000162)|Ovarian(85;0.000953)|Medulloblastoma(188;0.0109)|all_neural(188;0.0299)|Lung NSC(207;0.0538)|all_lung(207;0.0713)		all cancers(45;7.63e-28)|Epithelial(43;7.29e-27)|OV - Ovarian serous cystadenocarcinoma(40;7.15e-21)|BRCA - Breast invasive adenocarcinoma(625;3.56e-05)|Lung(200;0.0375)|LUSC - Lung squamous cell carcinoma(625;0.0703)	Sulindac(DB00605)	TACTCCTCCTGGCCGGCGGTA	0.597000		6	Mis		"""infrequent sarcomas, rare other types"""	"""rhadomyosarcoma, ganglioneuroblastoma, bladder"""			Costello syndrome	HNSCC(11;0.0054)			26	56					2.24059e-21	2.76779e-21	1	1	0
PDE4DIP	9659	broad.mit.edu	37	1	144856986	144856986	+	Missense_Mutation	SNP	C	C	A			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr1:144856986C>A	ENST00000369359.4	-	43	6945	c.6907G>T	c.(6907-6909)Gct>Tct	p.A2303S	PDE4DIP_ENST00000530740.1_Missense_Mutation_p.A2252S|PDE4DIP_ENST00000369354.3_Missense_Mutation_p.A2167S|PDE4DIP_ENST00000369356.4_Missense_Mutation_p.A2167S|PDE4DIP_ENST00000524974.1_5'UTR|PDE4DIP_ENST00000313382.9_Missense_Mutation_p.A2061S			Q5VU43	MYOME_HUMAN	phosphodiesterase 4D interacting protein	2167					cellular protein complex assembly	centrosome|Golgi apparatus|myofibril|nucleus	enzyme binding			NS(1)|breast(3)|central_nervous_system(2)|cervix(2)|endometrium(15)|haematopoietic_and_lymphoid_tissue(2)|kidney(9)|large_intestine(12)|lung(106)|ovary(8)|prostate(7)|skin(3)|upper_aerodigestive_tract(4)|urinary_tract(2)	176				Colorectal(2;0.0829)|COAD - Colon adenocarcinoma(2;0.126)		CCATCAGTAGCATCACCCTCT	0.473000			T	PDGFRB	MPD								6	71					6.40141e-05	7.46831e-05	1	1	0
RP11-423O2.5	0	broad.mit.edu	37	1	142803493	142803493	+	RNA	SNP	T	T	C	rs80149641	by1000genomes	TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr1:142803493T>C	ENST00000423385.1	-	0	1472																											TGTACATTTATTATTGATTTA	0.323000													7	43					0	0	1	0	0
USP32P2	0	broad.mit.edu	37	17	18420772	18420772	+	RNA	SNP	G	G	A	rs28569074	by1000genomes	TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr17:18420772G>A	ENST00000425211.1	-	0	1705																											AATTGAAATCGCTTAAGGTGA	0.343000													3	26					0	0	1	0	0
PANK4	55229	broad.mit.edu	37	1	2440495	2440495	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr1:2440495delG	ENST00000378466.3	-	19	2125	c.2113delC	c.(2113-2115)tgfs	p.L705fs	PANK4_ENST00000435556.3_Frame_Shift_Del_p.L666fs	NM_018216.1	NP_060686.1	Q9NVE7	PANK4_HUMAN	pantothenate kinase 4	705					coenzyme A biosynthetic process	cytoplasm	ATP binding|pantothenate kinase activity			breast(2)|cervix(2)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(2)|lung(4)|ovary(2)|prostate(1)|skin(1)|upper_aerodigestive_tract(4)	23	all_cancers(77;0.000158)|all_epithelial(69;8.01e-05)|all_lung(157;0.0212)|Lung NSC(156;0.0376)|Ovarian(185;0.0634)	all_epithelial(116;3.18e-20)|all_lung(118;1.67e-08)|Lung NSC(185;2.69e-06)|Breast(487;0.00147)|Renal(390;0.00183)|Hepatocellular(190;0.00826)|Myeloproliferative disorder(586;0.0122)|Ovarian(437;0.0308)|Lung SC(97;0.0847)|Medulloblastoma(700;0.123)		Epithelial(90;1.54e-37)|OV - Ovarian serous cystadenocarcinoma(86;6.95e-23)|GBM - Glioblastoma multiforme(42;2.81e-08)|Colorectal(212;4.25e-05)|COAD - Colon adenocarcinoma(227;0.000196)|Kidney(185;0.000342)|BRCA - Breast invasive adenocarcinoma(365;0.00445)|KIRC - Kidney renal clear cell carcinoma(229;0.00549)|STAD - Stomach adenocarcinoma(132;0.00644)|Lung(427;0.201)		CCCTTATCCAGGCGGCTTTGG	0.642													2	4	---	---	---	---					
PLEKHG5	57449	broad.mit.edu	37	1	6531115	6531115	+	Frame_Shift_Del	DEL	C	C	-			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr1:6531115delC	ENST00000377748.1	-	14	2055	c.1558delG	c.(1558-1560)agfs	p.E520fs	PLEKHG5_ENST00000377725.1_Frame_Shift_Del_p.E443fs|PLEKHG5_ENST00000377740.3_Frame_Shift_Del_p.E520fs|PLEKHG5_ENST00000377732.1_Frame_Shift_Del_p.E480fs|PLEKHG5_ENST00000377737.2_Frame_Shift_Del_p.E443fs|PLEKHG5_ENST00000377728.3_Frame_Shift_Del_p.E443fs|PLEKHG5_ENST00000537245.1_Frame_Shift_Del_p.E522fs|PLEKHG5_ENST00000535355.1_Frame_Shift_Del_p.E512fs|PLEKHG5_ENST00000400915.3_Frame_Shift_Del_p.E499fs|PLEKHG5_ENST00000340850.5_Frame_Shift_Del_p.E443fs|PLEKHG5_ENST00000400913.1_Frame_Shift_Del_p.E443fs|PLEKHG5_ENST00000544978.1_Frame_Shift_Del_p.E443fs	NM_198681.3	NP_941374.2	O94827	PKHG5_HUMAN	pleckstrin homology domain containing, family G (with RhoGef domain) member 5	499	DH.				apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|positive regulation of I-kappaB kinase/NF-kappaB cascade|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol|perinuclear region of cytoplasm	Rho guanyl-nucleotide exchange factor activity|signal transducer activity			liver(1)	1	Ovarian(185;0.02)|all_lung(157;0.154)	all_cancers(23;1.7e-35)|all_epithelial(116;2.78e-22)|all_lung(118;7.57e-07)|Lung NSC(185;4.26e-06)|Colorectal(325;4.47e-05)|all_hematologic(16;0.00014)|Breast(487;0.000688)|Renal(390;0.0007)|Hepatocellular(190;0.00308)|Myeloproliferative disorder(586;0.0255)|Ovarian(437;0.0448)		Epithelial(90;5.51e-35)|GBM - Glioblastoma multiforme(13;3.57e-27)|Colorectal(212;6.23e-08)|COAD - Colon adenocarcinoma(227;1.33e-05)|Kidney(185;4.89e-05)|KIRC - Kidney renal clear cell carcinoma(229;0.000894)|BRCA - Breast invasive adenocarcinoma(365;0.00107)|STAD - Stomach adenocarcinoma(132;0.00159)|READ - Rectum adenocarcinoma(331;0.0419)		ATGCAGCCCTCCTCCTCCATG	0.701													2	4	---	---	---	---					
RGPD2	729857	broad.mit.edu	37	2	88091594	88091595	+	Splice_Site	INS	-	-	A			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr2:88091594_88091595insA	ENST00000398146.3	-	17	2602		c.e17-2		RGPD2_ENST00000327544.6_Splice_Site|RGPD2_ENST00000420840.2_Splice_Site			Q68DN6	RGPD1_HUMAN	RANBP2-like and GRIP domain containing 2						intracellular transport		binding			breast(1)|pancreas(1)	2						GGGAGAATACtaaaaaaaaaaa	0.312													2	4	---	---	---	---					
KIAA1009	22832	broad.mit.edu	37	6	84871605	84871605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-S7-A7WR-01A-11D-A35I-08	TCGA-S7-A7WR-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	77e0c065-c669-4b66-bae6-bc13980ef055	c9c68651-013c-4a6c-819c-e62f10df5007	g.chr6:84871605delT	ENST00000403245.3	-	20	2650	c.2536delA	c.(2536-2538)ttfs	p.I846fs	KIAA1009_ENST00000257766.4_Frame_Shift_Del_p.I770fs|KIAA1009_ENST00000461137.1_5'UTR	NM_014895.2	NP_055710.2	Q5TB80	QN1_HUMAN	KIAA1009	846					cell division|mitosis	centrosome|nucleus|plasma membrane|spindle	protein binding			breast(2)|central_nervous_system(1)|endometrium(6)|kidney(3)|large_intestine(10)|lung(17)|ovary(1)|prostate(1)|stomach(1)|upper_aerodigestive_tract(1)	43		all_cancers(76;1.5e-06)|Acute lymphoblastic leukemia(125;2.69e-07)|all_hematologic(105;0.000151)|all_epithelial(107;0.00258)		BRCA - Breast invasive adenocarcinoma(397;0.089)		TCTTCTAAAATTTTTATTTCA	0.294													2	4	---	---	---	---					
