Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
DLEC1	9940	broad.mit.edu	37	3	38104135	38104135	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr3:38104135G>A	ENST00000308059.6	+	5	958	c.937G>A	c.(937-939)Gac>Aac	p.D313N	DLEC1_ENST00000452631.2_Missense_Mutation_p.D313N|DLEC1_ENST00000346219.3_Missense_Mutation_p.D313N			Q9Y238	DLEC1_HUMAN	deleted in lung and esophageal cancer 1	313					negative regulation of cell proliferation	cytoplasm				NS(1)|breast(3)|central_nervous_system(3)|endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(9)|lung(14)|ovary(3)|pancreas(3)|prostate(1)|skin(5)|upper_aerodigestive_tract(2)	51				KIRC - Kidney renal clear cell carcinoma(284;0.0664)|Kidney(284;0.0827)		GAGAGAGCTAGACAGACTTCT	0.428000													3	33					0	0	1	0	0
OR10G8	219869	broad.mit.edu	37	11	123900690	123900690	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr11:123900690C>T	ENST00000431524.1	+	1	394	c.361C>T	c.(361-363)Cgc>Tgc	p.R121C		NM_001004464.1	NP_001004464.1	Q8NGN5	O10G8_HUMAN	olfactory receptor, family 10, subfamily G, member 8	121					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			breast(1)|endometrium(7)|large_intestine(2)|lung(21)|ovary(1)|prostate(5)|skin(1)|stomach(3)|upper_aerodigestive_tract(1)|urinary_tract(2)	44		Breast(109;0.00867)|Medulloblastoma(222;0.0523)|Lung NSC(97;0.118)|all_lung(97;0.126)|all_neural(223;0.22)		BRCA - Breast invasive adenocarcinoma(274;4.88e-06)|OV - Ovarian serous cystadenocarcinoma(99;0.0521)		GTCCTGTGATCGCTACCTGGC	0.562000													5	106					0	0	1	0	0
NPIPA5	100288332	broad.mit.edu	37	16	15457701	15457701	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr16:15457701G>A	ENST00000360151.4	-	8	867	c.868C>T	c.(868-870)Ctc>Ttc	p.L290F		NM_001277325.1	NP_001264254.1			nuclear pore complex interacting protein family, member A5									p.L290F(2)									AGGGGAGTGAGCAGACACTCG	0.562000													5	177					0	0	1	0	0
KMT2C	58508	broad.mit.edu	37	7	151933008	151933008	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr7:151933008G>A	ENST00000355193.2	-	16	2881	c.2663C>T	c.(2662-2664)tCt>tTt	p.S888F	KMT2C_ENST00000262189.6_Missense_Mutation_p.S888F					lysine (K)-specific methyltransferase 2C																		TGGAAATCCAGACCCACGGCC	0.453000													6	51					0	0	1	0	0
UNC5B	219699	broad.mit.edu	37	10	73050842	73050842	+	Missense_Mutation	SNP	G	G	A	rs140003194		TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr10:73050842G>A	ENST00000335350.6	+	9	1686	c.1270G>A	c.(1270-1272)Gtc>Atc	p.V424I	UNC5B_ENST00000373192.4_Missense_Mutation_p.V413I	NM_170744.4	NP_734465.2	Q8IZJ1	UNC5B_HUMAN	unc-5 homolog B (C. elegans)	424					apoptosis|axon guidance|regulation of apoptosis	integral to membrane		p.V424I(1)		breast(2)|central_nervous_system(1)|endometrium(5)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(8)|lung(17)|ovary(4)|prostate(4)|skin(4)	49						TTTCCACCCCGTCAACTTTAA	0.602000													5	226					0	0	1	0	0
GLYATL1	92292	broad.mit.edu	37	11	58722339	58722339	+	Missense_Mutation	SNP	G	G	A	rs145603117		TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr11:58722339G>A	ENST00000300079.5	+	5	426	c.376G>A	c.(376-378)Gta>Ata	p.V126I	GLYATL1_ENST00000317391.4_Missense_Mutation_p.V95I|RP11-142C4.6_ENST00000533954.1_RNA	NM_001220496.1|NM_080661.3	NP_001207425.1|NP_542392.2	Q969I3	GLYL1_HUMAN	glycine-N-acyltransferase-like 1	95						mitochondrion	glycine N-acyltransferase activity			NS(1)|endometrium(1)|kidney(2)|large_intestine(5)|lung(19)|ovary(1)|skin(4)|urinary_tract(1)	34					Glycine(DB00145)	TTGTGAGATCGTAAACTGGAA	0.393000													3	26					0	0	1	0	0
NID1	4811	broad.mit.edu	37	1	236154305	236154305	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr1:236154305C>T	ENST00000264187.6	-	14	2891	c.2809G>A	c.(2809-2811)Gtg>Atg	p.V937M	NID1_ENST00000366595.3_Missense_Mutation_p.V804M	NM_002508.2	NP_002499.2	P14543	NID1_HUMAN	nidogen 1	937					cell-matrix adhesion	basement membrane	calcium ion binding	p.V937M(1)		breast(4)|endometrium(9)|kidney(1)|large_intestine(23)|lung(20)|pancreas(1)|prostate(4)|skin(3)|urinary_tract(1)	66	Ovarian(103;0.0544)|Breast(184;0.23)	all_cancers(173;0.00491)|Prostate(94;0.184)|Acute lymphoblastic leukemia(190;0.229)	OV - Ovarian serous cystadenocarcinoma(106;0.00162)		Becaplermin(DB00102)|Urokinase(DB00013)	AAGGGGATCACGGCGGTAGGC	0.597000													19	19					0	0	1	0	0
TPPP3	51673	broad.mit.edu	37	16	67424181	67424181	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr16:67424181C>T	ENST00000564104.1	-	3	1268	c.427G>A	c.(427-429)Ggc>Agc	p.G143S	TPPP3_ENST00000290942.5_Missense_Mutation_p.G143S|TPPP3_ENST00000562206.1_Missense_Mutation_p.G143S|TPPP3_ENST00000393957.2_Missense_Mutation_p.G143S			Q9BW30	TPPP3_HUMAN	tubulin polymerization-promoting protein family member 3	143					microtubule bundle formation	cytoplasm|microtubule	calcium ion binding|tubulin binding			central_nervous_system(1)|endometrium(2)|large_intestine(1)|lung(2)|prostate(1)	7		Ovarian(137;0.0563)		OV - Ovarian serous cystadenocarcinoma(108;0.0336)|Epithelial(162;0.0781)		TTGCCCTTGCCGCTCTCATCG	0.577000													4	107					0	0	1	0	0
KRTAP1-5	83895	broad.mit.edu	37	17	39183145	39183145	+	Missense_Mutation	SNP	A	A	G			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr17:39183145A>G	ENST00000361883.5	-	1	309	c.263T>C	c.(262-264)aTc>aCc	p.I88T		NM_031957.1	NP_114163.1	Q9BYS1	KRA15_HUMAN	keratin associated protein 1-5	88	15 X 5 AA repeats of C-C-[QEPVRC]- [TPIVLE]-[SRHVP].					keratin filament		p.I88T(11)		central_nervous_system(1)|endometrium(2)|kidney(1)|lung(9)|pancreas(1)|prostate(1)|upper_aerodigestive_tract(2)	17		Breast(137;0.00043)	STAD - Stomach adenocarcinoma(17;0.000371)			GCAGGAGCTGATCTGGCAGCA	0.632000													4	44					0	0	1	0	0
PPP3R2	5535	broad.mit.edu	37	9	104357180	104357180	+	Silent	SNP	C	C	T			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr9:104357180C>T	ENST00000374806.1	-	1	103	c.33G>A	c.(31-33)ccG>ccA	p.P11P	GRIN3A_ENST00000361820.3_Intron	NM_147180.2	NP_671709.1	Q96LZ3	CANB2_HUMAN	protein phosphatase 3, regulatory subunit B, beta	8							calcium ion binding			breast(1)|endometrium(2)|large_intestine(2)|lung(12)|ovary(1)|prostate(1)|skin(2)|upper_aerodigestive_tract(1)	22		Acute lymphoblastic leukemia(62;0.0527)			Cyclosporine(DB00091)	ACATCTCCGCCGGGTAACTGG	0.582000													37	46					0	0	1	0	0
DDX18	8886	broad.mit.edu	37	2	118582524	118582524	+	Silent	SNP	T	T	C			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr2:118582524T>C	ENST00000263239.2	+	9	1343	c.1215T>C	c.(1213-1215)gtT>gtC	p.V405V		NM_006773.3	NP_006764.3	Q9NVP1	DDX18_HUMAN	DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	405	Helicase C-terminal.						ATP binding|ATP-dependent RNA helicase activity|RNA binding			breast(2)|endometrium(2)|kidney(4)|large_intestine(3)|lung(9)|ovary(1)|prostate(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	25						AGGGATATGTTGTTTGTCCTT	0.363000													6	62					0	0	1	0	0
TPTE	7179	broad.mit.edu	37	21	10934987	10934987	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr21:10934987C>T	ENST00000298232.7	-	14	1119	c.752G>A	c.(751-753)cGg>cAg	p.R251Q	TPTE_ENST00000342420.5_Missense_Mutation_p.R231Q|TPTE_ENST00000361285.4_Missense_Mutation_p.R269Q|TPTE_ENST00000415664.2_5'UTR	NM_199259.2	NP_954868.1	P56180	TPTE_HUMAN	transmembrane phosphatase with tensin homology	269	Phosphatase tensin-type.				signal transduction	integral to membrane	ion channel activity|protein tyrosine phosphatase activity|protein tyrosine/serine/threonine phosphatase activity			NS(1)|breast(1)|central_nervous_system(2)|cervix(2)|endometrium(11)|haematopoietic_and_lymphoid_tissue(2)|kidney(3)|large_intestine(19)|lung(76)|ovary(2)|prostate(2)|skin(8)|urinary_tract(1)	130			Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		ATCTAGAAACCGCACAACTTC	0.338000													6	194					0	0	1	0	0
CLTCL1	8218	broad.mit.edu	37	22	19226895	19226895	+	Missense_Mutation	SNP	A	A	G			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr22:19226895A>G	ENST00000263200.10	-	5	770	c.698T>C	c.(697-699)gTt>gCt	p.V233A	CLTCL1_ENST00000427926.1_Missense_Mutation_p.V233A|CLTCL1_ENST00000353891.5_Missense_Mutation_p.V233A	NM_007098.3	NP_009029.3	P53675	CLH2_HUMAN	clathrin, heavy chain-like 1	233	Globular terminal domain.				anatomical structure morphogenesis|intracellular protein transport|mitosis|positive regulation of glucose import|receptor-mediated endocytosis	clathrin coat of coated pit|clathrin coat of trans-Golgi network vesicle|spindle|trans-Golgi network	protein binding|signal transducer activity|structural molecule activity			breast(2)|central_nervous_system(3)|cervix(2)|endometrium(9)|kidney(3)|large_intestine(11)|lung(9)|ovary(5)|prostate(2)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	49	Colorectal(54;0.0993)					AGGCTGTCCAACTTCAATGAT	0.488000			T	?	ALCL								4	93					0	0	1	0	0
PLIN4	729359	broad.mit.edu	37	19	4511859	4511859	+	Missense_Mutation	SNP	T	T	C			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr19:4511859T>C	ENST00000301286.3	-	3	2070	c.2071A>G	c.(2071-2073)Atg>Gtg	p.M691V		NM_001080400.1	NP_001073869.1	Q96Q06	PLIN4_HUMAN	perilipin 4	691	27 X 33 AA approximate tandem repeat.					lipid particle|plasma membrane				NS(2)|breast(4)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(7)|lung(14)|ovary(1)|skin(2)|soft_tissue(1)|stomach(2)	41						ACTGCCCCCATGAGCCCAGTA	0.592000													6	521					0	0	1	0	0
PPL	5493	broad.mit.edu	37	16	4933851	4933851	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr16:4933851G>A	ENST00000345988.2	-	22	4894	c.4805C>T	c.(4804-4806)gCg>gTg	p.A1602V	PPL_ENST00000590782.2_Missense_Mutation_p.A1600V	NM_002705.4	NP_002696.3	O60437	PEPL_HUMAN	periplakin	1602					keratinization	cytoskeleton|desmosome|mitochondrion|nucleus	protein binding|structural constituent of cytoskeleton			breast(6)|central_nervous_system(1)|endometrium(11)|kidney(5)|large_intestine(12)|lung(12)|ovary(4)|prostate(5)|skin(3)|stomach(1)|urinary_tract(2)	62						CCCAGAGTCCGCCACGGTCAT	0.577000													4	146					0	0	1	0	0
LRRC37B	114659	broad.mit.edu	37	17	30348408	30348408	+	Silent	SNP	G	G	A			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr17:30348408G>A	ENST00000327564.7	+	1	385	c.324G>A	c.(322-324)tcG>tcA	p.S108S	LRRC37B_ENST00000584368.1_Silent_p.S93S|LRRC37B_ENST00000543378.2_Intron|LRRC37B_ENST00000394713.3_Silent_p.S81S|LRRC37B_ENST00000341671.7_Silent_p.S81S			Q96QE4	LR37B_HUMAN	leucine rich repeat containing 37B	81						integral to membrane		p.S81S(1)		endometrium(3)|haematopoietic_and_lymphoid_tissue(3)|kidney(2)|large_intestine(3)|lung(10)|ovary(1)|prostate(2)|skin(1)|stomach(1)|upper_aerodigestive_tract(3)	29		Myeloproliferative disorder(56;0.0255)|all_hematologic(16;0.111)|Ovarian(249;0.182)|Breast(31;0.244)				CTGCTTCTTCGCAGATGTCAG	0.597000													47	52					0	0	1	0	0
NKD2	85409	broad.mit.edu	37	5	1038447	1038449	+	In_Frame_Del	DEL	CAC	CAC	-	rs3840989		TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr5:1038447_1038449delCAC	ENST00000296849.5	+	10	1544_1546	c.1315_1317delCAC	c.(1315-1317)del	p.H447del	NKD2_ENST00000382730.2_In_Frame_Del_p.AP78del|NKD2_ENST00000274150.4_3'UTR	NM_033120.2	NP_149111.1	Q969F2	NKD2_HUMAN	naked cuticle homolog 2 (Drosophila)	447	His-rich.				exocytosis|Wnt receptor signaling pathway	cytoplasmic membrane-bounded vesicle|plasma membrane	calcium ion binding|ubiquitin protein ligase binding			breast(1)|central_nervous_system(3)|large_intestine(1)|lung(8)|pancreas(1)	14	Lung NSC(6;2.47e-13)|all_lung(6;1.67e-12)|all_epithelial(6;3.28e-09)		Epithelial(17;0.00093)|OV - Ovarian serous cystadenocarcinoma(19;0.00239)|all cancers(22;0.00417)|Lung(60;0.165)			ccaccacgagcaccaccaccacc	0.690													2	4	---	---	---	---					
RRP36	88745	broad.mit.edu	37	6	42989414	42989419	+	In_Frame_Del	DEL	GCCGGG	GCCGGG	-	rs60664426		TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr6:42989414_42989419delGCCGGG	ENST00000244496.5	+	1	32_37	c.22_27delGCCGGG	c.(22-27)del	p.AG14del		NM_033112.2	NP_149103.1	Q96EU6	RRP36_HUMAN	ribosomal RNA processing 36 homolog (S. cerevisiae)	14					ribosomal small subunit biogenesis|rRNA processing	nucleolus		p.A8_G9delAG(2)		NS(1)|breast(1)|central_nervous_system(1)|large_intestine(5)|lung(1)|ovary(1)|prostate(1)	11						TAACTAccgcgccggggccggggccg	0.777													4	4	---	---	---	---					
CPVL	54504	broad.mit.edu	37	7	29070261	29070262	+	Frame_Shift_Ins	INS	-	-	T	rs5883182		TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr7:29070261_29070262insT	ENST00000409850.1	-	16	1897_1898	c.1251_1252insA	c.(1249-1254)aatttgfs	p.NL417fs	CPVL_ENST00000396276.3_Frame_Shift_Ins_p.NL417fs|CPVL_ENST00000265394.5_Frame_Shift_Ins_p.NL417fs			Q9H3G5	CPVL_HUMAN	carboxypeptidase, vitellogenic-like	417					proteolysis		protein binding|serine-type carboxypeptidase activity	p.V418fs*24(1)		NS(1)|breast(2)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(4)|lung(13)|ovary(2)|prostate(1)|skin(1)	28						ATCTTCCAAACTTTTTTTTCTG	0.510													10	296	---	---	---	---					
RP11-863P13.2	0	broad.mit.edu	37	16	88226611	88226611	+	RNA	DEL	G	G	-			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr16:88226611delG	ENST00000568587.1	-	0	91																											tggtggtgatggtggtgatgg	0.522													2	4	---	---	---	---					
LRRN4	164312	broad.mit.edu	37	20	6033401	6033401	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WB-A81A-01A-11D-A35I-08	TCGA-WB-A81A-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	667773ea-563c-4e90-b035-2075043477d7	c9c8d211-4711-4311-991e-c54adfec6f0a	g.chr20:6033401delG	ENST00000378858.4	-	2	269	c.45delC	c.(43-45)ccfs	p.P15fs		NM_152611.4	NP_689824.2	Q8WUT4	LRRN4_HUMAN	leucine rich repeat neuronal 4	15						integral to membrane				breast(1)|endometrium(3)|large_intestine(3)|lung(10)|ovary(2)|prostate(1)|skin(5)|urinary_tract(2)	27						CTGCCCAGCTGGGGCGCAGCA	0.682													2	4	---	---	---	---					
