Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
MYH3	4621	broad.mit.edu	37	17	10537355	10537355	+	Missense_Mutation	SNP	G	G	C			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr17:10537355G>C	ENST00000583535.1	-	32	4588	c.4501C>G	c.(4501-4503)Cgg>Ggg	p.R1501G	MYH3_ENST00000226209.7_Missense_Mutation_p.R1501G	NM_002470.3	NP_002461.2	P11055	MYH3_HUMAN	myosin, heavy chain 3, skeletal muscle, embryonic	1501					muscle filament sliding|muscle organ development	cytosol|myofibril|myosin filament	actin binding|ATP binding|calmodulin binding|microfilament motor activity			breast(2)|central_nervous_system(2)|cervix(1)|endometrium(8)|kidney(5)|large_intestine(18)|lung(30)|ovary(4)|pancreas(1)|prostate(4)|skin(2)|upper_aerodigestive_tract(5)|urinary_tract(1)	83						TTATTTTCCCGTTTCACAGTT	0.493000													10	89					0	0	1	0	0
AMER2	219287	broad.mit.edu	37	13	25744194	25744194	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr13:25744194C>T	ENST00000357816.2	-	3	1682	c.1207G>A	c.(1207-1209)Gag>Aag	p.E403K	AMER2_ENST00000515384.1_Missense_Mutation_p.E522K|AMER2_ENST00000381853.3_Missense_Mutation_p.E403K					APC membrane recruitment protein 2									p.E522*(1)|p.E403*(1)									CAGTAGCCCTCGTCGCTGTTG	0.662000													7	59					0	0	1	0	0
CRIPAK	285464	broad.mit.edu	37	4	1389240	1389240	+	Missense_Mutation	SNP	G	G	A	rs71299249		TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr4:1389240G>A	ENST00000324803.4	+	1	3901	c.941G>A	c.(940-942)cGt>cAt	p.R314H		NM_175918.3	NP_787114.2	Q8N1N5	CRPAK_HUMAN	cysteine-rich PAK1 inhibitor	314					ER-nucleus signaling pathway|negative regulation of protein kinase activity|regulation of cytoskeleton organization|response to estrogen stimulus	endoplasmic reticulum|nucleus|plasma membrane	protein binding			NS(3)|breast(1)|central_nervous_system(1)|endometrium(1)|kidney(2)|large_intestine(2)|lung(11)|ovary(1)|pancreas(2)|prostate(6)|skin(4)|urinary_tract(1)	35			OV - Ovarian serous cystadenocarcinoma(23;0.0106)			GCCTGCTCACGTGCCCATATG	0.662000													12	182					0	0	1	0	0
ZNF471	57573	broad.mit.edu	37	19	57037154	57037154	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr19:57037154G>A	ENST00000308031.5	+	5	1851	c.1718G>A	c.(1717-1719)tGt>tAt	p.C573Y	ZNF471_ENST00000593197.1_3'UTR|ZNF471_ENST00000591537.1_3'UTR	NM_020813.2	NP_065864.2	Q9BX82	ZN471_HUMAN	zinc finger protein 471	573					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|zinc ion binding			endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(12)|liver(2)|lung(8)|ovary(1)|skin(4)|upper_aerodigestive_tract(2)|urinary_tract(2)	36		Colorectal(82;5.46e-05)|Ovarian(87;0.0822)|Renal(1328;0.157)		GBM - Glioblastoma multiforme(193;0.0307)		CCCTATAAATGTACTGAATGT	0.423000													8	39					0	0	1	0	0
PKHD1L1	93035	broad.mit.edu	37	8	110457177	110457177	+	Silent	SNP	C	C	T			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr8:110457177C>T	ENST00000378402.5	+	38	5183	c.5079C>T	c.(5077-5079)gtC>gtT	p.V1693V		NM_177531.4	NP_803875.2	Q86WI1	PKHL1_HUMAN	polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1	1693	IPT/TIG 9.				immune response	cytosol|extracellular space|integral to membrane	receptor activity			NS(4)|breast(13)|central_nervous_system(6)|cervix(1)|endometrium(19)|kidney(17)|large_intestine(34)|lung(122)|ovary(11)|pancreas(3)|prostate(9)|skin(3)|stomach(4)|upper_aerodigestive_tract(13)|urinary_tract(4)	263			OV - Ovarian serous cystadenocarcinoma(57;9.88e-13)			GTGTAAAAGTCCTTATGGGTC	0.443000										HNSCC(38;0.096)			47	60					0	0	1	0	0
CADM1	23705	broad.mit.edu	37	11	115080343	115080343	+	Silent	SNP	G	G	T			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr11:115080343G>T	ENST00000537058.1	-	8	1049	c.1029C>A	c.(1027-1029)acC>acA	p.T343T	CADM1_ENST00000331581.6_Silent_p.T343T|CADM1_ENST00000536727.1_Intron|CADM1_ENST00000537140.1_Intron|CADM1_ENST00000542447.2_Intron|CADM1_ENST00000452722.2_Silent_p.T343T			Q9BY67	CADM1_HUMAN	cell adhesion molecule 1	343				PPTTIPPPTTTTTTTTTTTTTILTIIT -> TTATTEPAVH GLTQLPNSAEELDSEDLS (in Ref. 3; BAC11657).	adherens junction organization|apoptosis|cell differentiation|cell junction assembly|cell recognition|detection of stimulus|heterophilic cell-cell adhesion|homophilic cell adhesion|multicellular organismal development|positive regulation of cytokine secretion|spermatogenesis|susceptibility to natural killer cell mediated cytotoxicity	basolateral plasma membrane|cell-cell junction|integral to membrane	PDZ domain binding|protein C-terminus binding|protein homodimerization activity|receptor binding	p.T343T(5)		cervix(1)|endometrium(4)|kidney(4)|large_intestine(11)|lung(9)|ovary(2)|skin(1)	32	all_hematologic(175;0.0628)	all_cancers(61;2.98e-14)|all_epithelial(67;2.64e-08)|all_hematologic(158;0.000154)|Melanoma(852;0.000952)|Acute lymphoblastic leukemia(157;0.00101)|Breast(348;0.0102)|Medulloblastoma(222;0.0429)|Prostate(24;0.145)|all_neural(223;0.237)		BRCA - Breast invasive adenocarcinoma(274;5.01e-06)|Epithelial(105;0.000305)|all cancers(92;0.00303)		tggtggtggtggttgttgtgg	0.433000													5	36					1.23904e-05	1.34678e-05	1	1	0
METTL21C	196541	broad.mit.edu	37	13	103343216	103343216	+	Missense_Mutation	SNP	C	C	T			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr13:103343216C>T	ENST00000267273.6	-	2	234	c.229G>A	c.(229-231)Gag>Aag	p.E77K		NM_001010977.1	NP_001010977.1	Q5VZV1	MT21C_HUMAN	methyltransferase like 21C	77							methyltransferase activity			breast(1)|large_intestine(3)|lung(2)|skin(1)	7						ATGACAATCTCCTTTCCTGCA	0.453000													7	41					0	0	1	0	0
SREBF2	6721	broad.mit.edu	37	22	42273265	42273265	+	Silent	SNP	G	G	A	rs143287516		TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr22:42273265G>A	ENST00000361204.4	+	8	1585	c.1419G>A	c.(1417-1419)gcG>gcA	p.A473A		NM_004599.2	NP_004590.2	Q12772	SRBP2_HUMAN	sterol regulatory element binding transcription factor 2	473	Interaction with LMNA (By similarity).				cholesterol metabolic process	ER to Golgi transport vesicle membrane|Golgi membrane|nucleus|SREBP-SCAP-Insig complex	protein C-terminus binding			NS(2)|breast(6)|central_nervous_system(1)|endometrium(4)|kidney(2)|large_intestine(5)|lung(9)|ovary(1)|pancreas(1)|prostate(2)|skin(2)|upper_aerodigestive_tract(2)|urinary_tract(1)	38						CTCCTGTGGCGCTGGGCATGG	0.512000													6	67					0	0	1	0	0
TRBV7-1	0	broad.mit.edu	37	7	142032456	142032456	+	RNA	SNP	C	C	T			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr7:142032456C>T	ENST00000547918.2	+	0	309																											CTGAGGGATCCATCTCCACTC	0.567000													13	9					0	0	1	0	0
DYNC2H1	79659	broad.mit.edu	37	11	103027115	103027115	+	Splice_Site	SNP	A	A	G			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr11:103027115A>G	ENST00000375735.2	+	26	3888		c.e26-1		DYNC2H1_ENST00000334267.7_Intron|DYNC2H1_ENST00000398093.3_Splice_Site	NM_001080463.1|NM_001377.2	NP_001073932.1|NP_001368.2	Q8NCM8	DYHC2_HUMAN	dynein, cytoplasmic 2, heavy chain 1						cell projection organization|Golgi organization|microtubule-based movement|multicellular organismal development	cilium axoneme|dynein complex|Golgi apparatus|microtubule|plasma membrane	ATP binding|ATPase activity|microtubule motor activity			NS(1)|endometrium(4)|kidney(5)|large_intestine(9)|lung(9)|ovary(1)|prostate(2)|upper_aerodigestive_tract(2)	33		Acute lymphoblastic leukemia(157;0.000966)|all_hematologic(158;0.00348)		BRCA - Breast invasive adenocarcinoma(274;0.000177)|Epithelial(105;0.0785)		TGTGTTAAATAGGATTTAAAT	0.279000													6	10					0	0	1	0	0
KIF13B	23303	broad.mit.edu	37	8	28928038	28928038	+	Missense_Mutation	SNP	T	T	G			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr8:28928038T>G	ENST00000524189.1	-	40	5502	c.5464A>C	c.(5464-5466)Aaa>Caa	p.K1822Q	KIF13B_ENST00000404075.3_Missense_Mutation_p.K341Q	NM_015254.3	NP_056069.2	Q9NQT8	KI13B_HUMAN	kinesin family member 13B	1822					microtubule-based movement|protein targeting|signal transduction|T cell activation	cytoplasm|microtubule	ATP binding|microtubule motor activity|protein kinase binding			endometrium(6)|kidney(1)|lung(20)|urinary_tract(1)	28		Ovarian(32;0.000536)		KIRC - Kidney renal clear cell carcinoma(542;0.152)|Kidney(114;0.181)		GCCCAGGATTTCCGGTTCTCA	0.682000													3	14					0	0	1	0	0
AGAP10	728127	broad.mit.edu	37	10	47207828	47207828	+	Missense_Mutation	SNP	C	C	A			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr10:47207828C>A	ENST00000355232.3	-	5	3467	c.455G>T	c.(454-456)aGc>aTc	p.S152I	AGAP10_ENST00000413193.2_Missense_Mutation_p.S223I|AGAP10_ENST00000452145.2_Missense_Mutation_p.S127I|RP11-144G6.12_ENST00000605970.1_RNA					ArfGAP with GTPase domain, ankyrin repeat and PH domain 10									p.S223I(4)		endometrium(5)|kidney(3)|lung(1)|prostate(2)|urinary_tract(1)	12						TGTACAGTTGCTTCTTCTTAT	0.264000													3	34					0.00024832	0.000258667	1	1	0
MST1L	0	broad.mit.edu	37	1	17085006	17085006	+	RNA	SNP	C	C	T	rs147678325	by1000genomes	TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr1:17085006C>T	ENST00000455405.2	-	0	182																											CGGATGGCCCCCAGCCACGCG	0.607000													5	52					0	0	1	0	0
FAM111B	374393	broad.mit.edu	37	11	58877137	58877137	+	Silent	SNP	C	C	T	rs138558402		TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr11:58877137C>T	ENST00000343597.3	+	3	230	c.39C>T	c.(37-39)agC>agT	p.S13S	FAM111B_ENST00000529618.1_Intron|FAM111B_ENST00000411426.1_Intron	NM_198947.3	NP_945185.1	Q6SJ93	F111B_HUMAN	family with sequence similarity 111, member B	13							catalytic activity			endometrium(4)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(13)|liver(1)|lung(12)|ovary(3)|pancreas(1)|skin(1)	40						AGTCATTTAGCGCTATGGAAG	0.368000													3	27					0	0	1	0	0
ZNF608	57507	broad.mit.edu	37	5	123982608	123982608	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr5:123982608G>A	ENST00000306315.5	-	4	3904	c.3469C>T	c.(3469-3471)Ccc>Tcc	p.P1157S	ZNF608_ENST00000504926.1_Missense_Mutation_p.P730S	NM_020747.2	NP_065798.2	Q9ULD9	ZN608_HUMAN	zinc finger protein 608	1157						intracellular	zinc ion binding			breast(4)|endometrium(4)|haematopoietic_and_lymphoid_tissue(2)|kidney(6)|large_intestine(8)|lung(12)|ovary(3)|skin(6)|urinary_tract(1)	46		all_cancers(142;0.186)|Prostate(80;0.081)	KIRC - Kidney renal clear cell carcinoma(527;0.159)|Kidney(363;0.221)	OV - Ovarian serous cystadenocarcinoma(64;0.00126)|Epithelial(69;0.00238)|all cancers(49;0.00783)		GGAGTAGAGGGAGCTTTTGAG	0.463000													22	69					0	0	1	0	0
SLFNL1	200172	broad.mit.edu	37	1	41483806	41483808	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr1:41483806_41483808delTCC	ENST00000359345.1	-	2	3032_3034	c.456_458delGGA	c.(454-459)gac>ga	p.ED152del	SLFNL1_ENST00000372613.2_In_Frame_Del_p.ED152del|SLFNL1_ENST00000397197.2_In_Frame_Del_p.ED152del|SLFNL1_ENST00000372611.1_Intron|SLFNL1_ENST00000302946.8_In_Frame_Del_p.ED152del|SLFNL1_ENST00000439569.2_In_Frame_Del_p.ED152del	NM_144990.3	NP_659427.3	Q499Z3	SLNL1_HUMAN	schlafen-like 1	152							ATP binding			endometrium(3)|large_intestine(3)|lung(2)|prostate(1)|skin(1)	10	Ovarian(52;0.00769)|all_hematologic(146;0.0977)|Breast(333;0.1)|Acute lymphoblastic leukemia(166;0.155)	Myeloproliferative disorder(586;0.0393)				CAGGCCACTGtcctcctcctcct	0.626													2	4	---	---	---	---					
AAK1	22848	broad.mit.edu	37	2	69741805	69741807	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr2:69741805_69741807delTGT	ENST00000409085.4	-	13	1948_1950	c.1572_1574delACA	c.(1570-1575)cag>ca	p.QQ524del	AAK1_ENST00000406297.3_In_Frame_Del_p.QQ524del|AAK1_ENST00000409068.1_In_Frame_Del_p.QQ524del	NM_014911.3	NP_055726.3	Q2M2I8	AAK1_HUMAN	AP2 associated kinase 1	524	Gln-rich.					coated pit|mitochondrion|plasma membrane	ATP binding|protein serine/threonine kinase activity			NS(1)|breast(1)|endometrium(2)|kidney(2)|large_intestine(4)|lung(6)|prostate(1)	17						CATTAGCTGCTGTTGAGAGCCTC	0.502													12	8	---	---	---	---					
NPIPA8	101059953	broad.mit.edu	37	16	18441114	18441116	+	Splice_Site	DEL	CAC	CAC	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr16:18441114_18441116delCAC	ENST00000339303.5	-	1	15		c.e1+1							nuclear pore complex interacting protein family, member A8																		CGGCCATACTCACCACTGGGACT	0.709													4	2	---	---	---	---					
ZNF720	124411	broad.mit.edu	37	16	31766972	31766972	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr16:31766972delG	ENST00000399681.3	+	6	1839	c.1360delG	c.(1360-1362)gcfs	p.G454fs	ZNF720_ENST00000531864.2_Intron|ZNF720_ENST00000539915.1_Intron|ZNF720_ENST00000316491.9_Intron|ZNF720_ENST00000534369.1_Intron			Q7Z2F6	ZN720_HUMAN	zinc finger protein 720	0					regulation of transcription, DNA-dependent	intracellular	nucleic acid binding			endometrium(1)|kidney(1)|lung(1)|stomach(1)	4						TAAAGAATGTGGCAAATTATT	0.338													2	4	---	---	---	---					
CNOT1	23019	broad.mit.edu	37	16	58589235	58589236	+	Frame_Shift_Del	DEL	AT	AT	-	rs145768046		TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr16:58589235_58589236delAT	ENST00000317147.5	-	21	3142_3143	c.2810_2811delAT	c.(2809-2811)tfs	p.Y937fs	CNOT1_ENST00000569240.1_Frame_Shift_Del_p.Y932fs|CNOT1_ENST00000569732.1_5'UTR|CNOT1_ENST00000441024.2_Frame_Shift_Del_p.Y937fs	NM_001265612.1|NM_016284.4	NP_001252541.1|NP_057368.3	A5YKK6	CNOT1_HUMAN	CCR4-NOT transcription complex, subunit 1	937					nuclear-transcribed mRNA poly(A) tail shortening|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasmic mRNA processing body|cytosol				breast(1)|central_nervous_system(2)|endometrium(9)|haematopoietic_and_lymphoid_tissue(4)|kidney(7)|large_intestine(24)|lung(25)|ovary(4)|prostate(6)|skin(3)|upper_aerodigestive_tract(2)	87				Kidney(780;0.0722)|OV - Ovarian serous cystadenocarcinoma(108;0.173)|Epithelial(162;0.239)		CTTCAAGAACATATCGTAGAGC	0.401													56	79	---	---	---	---					
PLIN5	440503	broad.mit.edu	37	19	4525016	4525016	+	Frame_Shift_Del	DEL	C	C	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chr19:4525016delC	ENST00000381848.3	-	7	873	c.793delG	c.(793-795)aafs	p.E265fs		NM_001013706.2	NP_001013728.2	Q00G26	PLIN5_HUMAN	perilipin 5	265						lipid particle				endometrium(4)|lung(3)|skin(2)|upper_aerodigestive_tract(1)	10						TGGCCCCATTCCCCCCACAGC	0.682													2	4	---	---	---	---					
BCOR	54880	broad.mit.edu	37	X	39933743	39933743	+	Frame_Shift_Del	DEL	T	T	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chrX:39933743delT	ENST00000342274.4	-	4	1218	c.856delA	c.(856-858)gcfs	p.S286fs	BCOR_ENST00000397354.3_Frame_Shift_Del_p.S286fs|BCOR_ENST00000378455.4_Frame_Shift_Del_p.S286fs|BCOR_ENST00000378444.4_Frame_Shift_Del_p.S286fs	NM_001123383.1	NP_001116855.1	Q6W2J9	BCOR_HUMAN	BCL6 corepressor	286					heart development|histone H2A monoubiquitination|negative regulation of bone mineralization|negative regulation of histone H3-K36 methylation|negative regulation of histone H3-K4 methylation|negative regulation of tooth mineralization|negative regulation of transcription from RNA polymerase II promoter|odontogenesis|palate development|specification of axis polarity|transcription, DNA-dependent	nucleus	heat shock protein binding|histone deacetylase binding|transcription corepressor activity|transcription factor binding|transcription regulatory region DNA binding			breast(4)|central_nervous_system(11)|cervix(1)|endometrium(24)|eye(6)|haematopoietic_and_lymphoid_tissue(33)|kidney(2)|large_intestine(11)|lung(22)|ovary(2)|pancreas(1)|prostate(2)|skin(2)|upper_aerodigestive_tract(3)|urinary_tract(2)	126						CACGGGAGGCTTTTGTCTGCG	0.607			"""F, N, S, T"""	RARA	"""retinoblastoma, AML, APL(translocation)"""		oculo-facio-cardio-dental genetic						2	4	---	---	---	---					
UBL4A	8266	broad.mit.edu	37	X	153714628	153714628	+	Frame_Shift_Del	DEL	G	G	-			TCGA-WB-A81I-01A-11D-A35I-08	TCGA-WB-A81I-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	b25e4ee2-290d-4b48-85da-bd902fefb6fd	d97d6679-1c0d-4124-841a-627d4cc62281	g.chrX:153714628delG	ENST00000369660.4	-	2	178	c.93delC	c.(91-93)tcfs	p.S31fs	UBL4A_ENST00000369653.4_Frame_Shift_Del_p.S31fs	NM_014235.3	NP_055050.1	P11441	UBL4A_HUMAN	ubiquitin-like 4A	31	Ubiquitin-like.				protein modification process|tail-anchored membrane protein insertion into ER membrane|transport	BAT3 complex	small conjugating protein ligase activity			endometrium(5)|lung(1)|urinary_tract(1)	7	all_cancers(53;5.05e-16)|all_epithelial(53;1.87e-10)|all_lung(58;1.84e-07)|Lung NSC(58;5.84e-07)|all_hematologic(71;2.45e-06)|Acute lymphoblastic leukemia(192;6.56e-05)|Breast(217;0.176)					TCAGCTTCTCGGAGACCAGCT	0.701													2	4	---	---	---	---					
