Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
FBXO8	26269	broad.mit.edu	37	4	175183979	175183979	+	Missense_Mutation	SNP	T	T	C			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr4:175183979T>C	ENST00000393674.2	-	2	1127	c.265A>G	c.(265-267)Act>Gct	p.T89A	FBXO8_ENST00000503293.1_Intron	NM_012180.2	NP_036312.2	Q9NRD0	FBX8_HUMAN	F-box protein 8	89	F-box.				regulation of ARF protein signal transduction|ubiquitin-dependent protein catabolic process	cytoplasm|ubiquitin ligase complex	ARF guanyl-nucleotide exchange factor activity			breast(3)|endometrium(1)|kidney(1)|large_intestine(5)|lung(2)|prostate(1)|urinary_tract(1)	14		Prostate(90;0.00201)|Melanoma(52;0.012)|Renal(120;0.0183)|all_neural(102;0.0887)|all_hematologic(60;0.107)		all cancers(43;7.29e-18)|Epithelial(43;1.85e-15)|OV - Ovarian serous cystadenocarcinoma(60;5.62e-09)|GBM - Glioblastoma multiforme(59;0.00115)|STAD - Stomach adenocarcinoma(60;0.00299)|LUSC - Lung squamous cell carcinoma(193;0.1)		CAAAGGTCAGTTGCATTCAGG	0.423000													9	50					0	0	1	0	0
PRTG	283659	broad.mit.edu	37	15	55965852	55965852	+	Silent	SNP	A	A	G			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr15:55965852A>G	ENST00000389286.4	-	10	1616	c.1569T>C	c.(1567-1569)atT>atC	p.I523I		NM_173814.4	NP_776175.2	Q2VWP7	PRTG_HUMAN	protogenin	523	Fibronectin type-III 2.				multicellular organismal development	integral to membrane				breast(1)|endometrium(6)|kidney(4)|large_intestine(7)|liver(1)|lung(18)|ovary(1)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)	41				all cancers(107;0.00891)|GBM - Glioblastoma multiforme(80;0.135)		TTGTCAAACTAATTTCAGGAG	0.443000													8	55					0	0	1	0	0
SLC36A2	153201	broad.mit.edu	37	5	150722489	150722489	+	Missense_Mutation	SNP	T	T	A			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr5:150722489T>A	ENST00000335244.4	-	4	529	c.400A>T	c.(400-402)Aac>Tac	p.N134Y	SLC36A2_ENST00000521967.1_Missense_Mutation_p.N134Y	NM_181776.2	NP_861441.2	Q495M3	S36A2_HUMAN	solute carrier family 36 (proton/amino acid symporter), member 2	134					cellular nitrogen compound metabolic process	cytoplasm|integral to membrane|plasma membrane	glycine transmembrane transporter activity			breast(1)|central_nervous_system(1)|cervix(1)|endometrium(2)|kidney(14)|large_intestine(3)|lung(8)|ovary(1)|prostate(1)|upper_aerodigestive_tract(1)	33		Medulloblastoma(196;0.109)|all_hematologic(541;0.243)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)			GCGTTGGGGTTGGCTTCTAGT	0.517000													5	68					0	0	1	0	0
HAO2	51179	broad.mit.edu	37	1	119934877	119934877	+	Missense_Mutation	SNP	G	G	A			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr1:119934877G>A	ENST00000361035.4	+	7	1238	c.955G>A	c.(955-957)Ggc>Agc	p.G319S	HAO2_ENST00000325945.3_Missense_Mutation_p.G306S	NM_001005783.1	NP_001005783.1	Q9NYQ3	HAOX2_HUMAN	hydroxyacid oxidase 2 (long chain)	306	FMN hydroxy acid dehydrogenase.				fatty acid alpha-oxidation	peroxisome	(S)-2-hydroxy-acid oxidase activity			breast(1)|endometrium(6)|kidney(2)|large_intestine(5)|lung(10)|ovary(2)|skin(2)|upper_aerodigestive_tract(2)	30	all_neural(166;0.187)	all_lung(203;1.06e-06)|Lung NSC(69;7.5e-06)|all_epithelial(167;0.000284)		Lung(183;0.0155)|LUSC - Lung squamous cell carcinoma(189;0.0856)		AATCCTATGGGGCCTTGCCTG	0.498000													3	25					0	0	1	0	0
BAGE2	85319	broad.mit.edu	37	21	11058353	11058353	+	RNA	SNP	T	T	C	rs79433933	by1000genomes	TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr21:11058353T>C	ENST00000470054.1	-	0	324									B melanoma antigen family, member 2															Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		GAAATCTCTTTATAAAACCTT	0.343000													6	103					0	0	1	0	0
RP11-156P1.3	0	broad.mit.edu	37	17	45128742	45128742	+	RNA	SNP	T	T	G	rs34655963	by1000genomes	TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr17:45128742T>G	ENST00000575173.1	-	0	418																											TAATGATTTTTATTATACTTT	0.328000													4	93					0	0	1	0	0
FAT4	79633	broad.mit.edu	37	4	126408600	126408600	+	Missense_Mutation	SNP	C	C	G			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr4:126408600C>G	ENST00000394329.3	+	16	12930	c.12917C>G	c.(12916-12918)aCt>aGt	p.T4306S	FAT4_ENST00000335110.5_Missense_Mutation_p.T2547S	NM_024582.4	NP_078858.4	Q6V0I7	FAT4_HUMAN	FAT atypical cadherin 4	4306	Laminin G-like 2.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			NS(6)|autonomic_ganglia(1)|breast(4)|central_nervous_system(3)|cervix(3)|endometrium(27)|haematopoietic_and_lymphoid_tissue(3)|kidney(10)|large_intestine(93)|liver(3)|lung(120)|ovary(9)|pancreas(2)|prostate(21)|skin(31)|stomach(1)|upper_aerodigestive_tract(12)|urinary_tract(6)	355						CACTGGCACACTTTTCTAATT	0.398000													5	62					0	0	1	0	0
TBP	6908	broad.mit.edu	37	6	170871052	170871052	+	Silent	SNP	G	G	A	rs112083427		TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr6:170871052G>A	ENST00000392092.2	+	3	507	c.228G>A	c.(226-228)caG>caA	p.Q76Q	TBP_ENST00000230354.6_Silent_p.Q76Q|TBP_ENST00000540980.1_Silent_p.Q56Q	NM_003194.4	NP_003185.1	P20226	TBP_HUMAN	TATA box binding protein	76	Poly-Gln.				cell death|interspecies interaction between organisms|transcription elongation from RNA polymerase II promoter|transcription from RNA polymerase III promoter|viral reproduction	transcription factor TFIIA complex|transcription factor TFIID complex	repressing transcription factor binding|transcription regulatory region DNA binding	p.Q76Q(4)		breast(2)|central_nervous_system(1)|endometrium(5)|kidney(1)|large_intestine(2)|lung(9)|ovary(1)|prostate(4)|urinary_tract(1)	26		Breast(66;5.08e-05)|Ovarian(120;0.125)|Esophageal squamous(34;0.246)		OV - Ovarian serous cystadenocarcinoma(33;1.07e-22)|BRCA - Breast invasive adenocarcinoma(81;5.01e-06)|GBM - Glioblastoma multiforme(31;0.00591)		agcaacagcagcagcagcagc	0.572000													3	30					0	0	1	0	0
NSUN2	54888	broad.mit.edu	37	5	6600272	6600272	+	Missense_Mutation	SNP	G	G	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr5:6600272G>T	ENST00000264670.6	-	19	2382	c.2071C>A	c.(2071-2073)Ccc>Acc	p.P691T	NSUN2_ENST00000539938.1_Missense_Mutation_p.P455T|NSUN2_ENST00000506139.1_Missense_Mutation_p.P656T	NM_017755.5	NP_060225.4	Q08J23	NSUN2_HUMAN	NOP2/Sun RNA methyltransferase family, member 2	691						cytoplasm|nucleolus	tRNA (cytosine-5-)-methyltransferase activity|tRNA binding			breast(1)|endometrium(6)|kidney(2)|large_intestine(5)|lung(23)|ovary(1)|prostate(2)|upper_aerodigestive_tract(1)	41						TCATTCTTGGGCACAAAAGTT	0.498000													3	41					0.115264	0.115264	1	1	0
CD244	51744	broad.mit.edu	37	1	160801173	160801173	+	Silent	SNP	G	G	A			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr1:160801173G>A	ENST00000368034.4	-	9	1239	c.1062C>T	c.(1060-1062)agC>agT	p.S354S	CD244_ENST00000368033.3_Silent_p.S359S|CD244_ENST00000322302.7_Silent_p.S262S	NM_001166663.1|NM_001166664.1|NM_016382.3	NP_001160135.1|NP_001160136.1|NP_057466.1	Q9BZW8	CD244_HUMAN	CD244 molecule, natural killer cell receptor 2B4	359					blood coagulation|leukocyte migration	integral to membrane|plasma membrane	protein binding|receptor activity			central_nervous_system(1)|large_intestine(3)|lung(12)|ovary(1)|urinary_tract(1)	18	all_cancers(52;2.72e-17)|all_hematologic(112;0.093)		BRCA - Breast invasive adenocarcinoma(70;0.00737)			GCTCTTTGCGGCTCAATCGAG	0.458000													4	110					0	0	1	0	0
RP11-423O2.5	0	broad.mit.edu	37	1	142803543	142803543	+	RNA	SNP	C	C	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr1:142803543C>T	ENST00000423385.1	-	0	1422																											TGTTGGAATTCCTGATGAATC	0.269000													6	139					0	0	1	0	0
ECD	11319	broad.mit.edu	37	10	74899424	74899424	+	Missense_Mutation	SNP	A	A	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr10:74899424A>T	ENST00000372979.4	-	10	1405	c.1199T>A	c.(1198-1200)cTt>cAt	p.L400H	ECD_ENST00000454759.1_Missense_Mutation_p.L357H|ECD_ENST00000430082.1_Missense_Mutation_p.L433H	NM_007265.2	NP_009196.1	O95905	SGT1_HUMAN	ecdysoneless homolog (Drosophila)	400					regulation of glycolysis|regulation of transcription, DNA-dependent|transcription from RNA polymerase II promoter	cytoplasm|nucleus	transcription coactivator activity			breast(1)|endometrium(3)|kidney(1)|large_intestine(4)|lung(5)|pancreas(1)|prostate(1)|skin(1)|stomach(2)|upper_aerodigestive_tract(1)|urinary_tract(1)	21	Prostate(51;0.0119)					TTCTTTCTTAAGGTCTTCTAT	0.348000													17	220					0	0	1	0	0
NDNL2	56160	broad.mit.edu	37	15	29561154	29561154	+	Silent	SNP	C	C	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr15:29561154C>T	ENST00000332303.4	-	1	879	c.756G>A	c.(754-756)ccG>ccA	p.P252P	FAM189A1_ENST00000261275.4_Intron	NM_138704.3	NP_619649.1	Q96MG7	MAGG1_HUMAN	necdin-like 2	252	MAGE.				regulation of growth	cytoplasm|nucleus				breast(3)|large_intestine(2)|lung(3)	8		all_lung(180;4.69e-11)|Breast(32;0.0013)		all cancers(64;8.37e-11)|Epithelial(43;9.29e-10)|BRCA - Breast invasive adenocarcinoma(123;0.00736)|GBM - Glioblastoma multiforme(186;0.018)|Lung(196;0.153)		GGTTGGTTCGCGGGCCCCACT	0.532000													4	150					0	0	1	0	0
INPP5B	3633	broad.mit.edu	37	1	38397417	38397417	+	Silent	SNP	G	G	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr1:38397417G>T	ENST00000373023.2	-	7	793	c.700C>A	c.(700-702)Cgg>Agg	p.R234R	INPP5B_ENST00000373021.1_Silent_p.R234R|INPP5B_ENST00000373027.1_5'UTR|INPP5B_ENST00000373024.3_Intron|INPP5B_ENST00000373026.1_Silent_p.R234R	NM_005540.2	NP_005531.2	P32019	I5P2_HUMAN	inositol polyphosphate-5-phosphatase, 75kDa	234					regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol|integral to membrane|microtubule cytoskeleton	GTPase activator activity|inositol-polyphosphate 5-phosphatase activity|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity|protein binding			breast(1)|endometrium(2)|large_intestine(1)|liver(1)|lung(9)|urinary_tract(1)	15	Acute lymphoblastic leukemia(166;0.074)|all_hematologic(146;0.197)	Myeloproliferative disorder(586;0.0255)				TCCTCATCCCGCCGCCCGTCC	0.692000													3	19					0.004672	0.0051392	1	1	0
TAOK1	57551	broad.mit.edu	37	17	27834971	27834971	+	Missense_Mutation	SNP	G	G	T			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr17:27834971G>T	ENST00000261716.3	+	14	1915	c.1396G>T	c.(1396-1398)Ggc>Tgc	p.G466C	TAOK1_ENST00000536202.1_Missense_Mutation_p.G466C	NM_020791.2	NP_065842.1	Q7L7X3	TAOK1_HUMAN	TAO kinase 1	466					mitotic prometaphase	cytosol|intracellular membrane-bounded organelle	ATP binding|protein serine/threonine kinase activity			NS(1)|breast(1)|central_nervous_system(1)|cervix(1)|endometrium(1)|large_intestine(4)|lung(14)|prostate(2)|skin(2)|upper_aerodigestive_tract(1)	28			Colorectal(6;0.198)			ACAAATGTCTGGCTATAAGCG	0.393000													3	33					6.4e-05	7.41053e-05	1	1	0
RP11-343N15.1	0	broad.mit.edu	37	1	121137791	121137793	+	RNA	DEL	CCA	CCA	-	rs28552466	by1000genomes	TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr1:121137791_121137793delCCA	ENST00000437515.1	-	0	329																											ATTTCGCCCTCCACCGCCGCCGC	0.631													5	4	---	---	---	---					
SPEG	10290	broad.mit.edu	37	2	220348147	220348147	+	Frame_Shift_Del	DEL	A	A	-			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr2:220348147delA	ENST00000312358.7	+	30	6094	c.5962delA	c.(5962-5964)gcfs	p.S1988fs	AC053503.11_ENST00000429882.1_RNA|SPEG_ENST00000485813.1_3'UTR	NM_005876.4	NP_005867.3	Q15772	SPEG_HUMAN	SPEG complex locus	1988					muscle organ development|negative regulation of cell proliferation	nucleus	ATP binding|protein serine/threonine kinase activity			breast(2)|central_nervous_system(3)|endometrium(10)|kidney(2)|large_intestine(9)|lung(42)|ovary(5)|pancreas(1)|prostate(8)|skin(1)|stomach(9)|upper_aerodigestive_tract(4)|urinary_tract(4)	100		Renal(207;0.0183)		Epithelial(149;4.5e-10)|all cancers(144;7.93e-08)|Lung(261;0.00639)|LUSC - Lung squamous cell carcinoma(224;0.00829)|READ - Rectum adenocarcinoma(5;0.163)		GGAGGCTCCCAGCCCAGAGGC	0.731													2	4	---	---	---	---					
PVRL1	5818	broad.mit.edu	37	11	119535678	119535680	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr11:119535678_119535680delCCT	ENST00000264025.3	-	6	1861_1863	c.1331_1333delAGG	c.(1330-1335)ggc>g	p.EG444del	PVRL1_ENST00000341398.2_Intron	NM_002855.4	NP_002846.3	Q15223	PVRL1_HUMAN	poliovirus receptor-related 1 (herpesvirus entry mediator C)	444	Poly-Glu.				adherens junction organization|cell junction assembly|entry of virus into host cell|heterophilic cell-cell adhesion|homophilic cell adhesion|immune response	cell-cell adherens junction|extracellular region|integral to membrane	cell adhesion molecule binding|coreceptor activity|protein homodimerization activity	p.E444fs*>73(1)		breast(1)|endometrium(3)|kidney(2)|large_intestine(9)|liver(1)|lung(7)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	27		Breast(348;0.037)|Medulloblastoma(222;0.0425)|all_neural(223;0.112)		BRCA - Breast invasive adenocarcinoma(274;4.29e-05)		CCTCCACCGCcctcctcctcctc	0.660													7	33	---	---	---	---					
FAM155A	728215	broad.mit.edu	37	13	108518687	108518689	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr13:108518687_108518689delCTG	ENST00000375915.2	-	1	394_396	c.256_258delCAG	c.(256-258)del	p.Q86del		NM_001080396.2	NP_001073865.1	B1AL88	F155A_HUMAN	family with sequence similarity 155, member A	86	Poly-Gln.					integral to membrane	binding			breast(3)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(5)|lung(11)|prostate(2)|skin(2)|upper_aerodigestive_tract(3)|urinary_tract(1)	33						gccgctgcctctgctgctgctgc	0.719													7	42	---	---	---	---					
RRN3P1	0	broad.mit.edu	37	16	21817398	21817399	+	RNA	INS	-	-	A	rs144931984	by1000genomes	TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr16:21817398_21817399insA	ENST00000546471.1	-	0	1607																											TAAATGaaaataaaaaaataaa	0.302													5	5	---	---	---	---					
MINK1	50488	broad.mit.edu	37	17	4793935	4793937	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr17:4793935_4793937delCAG	ENST00000355280.6	+	14	1667_1669	c.1471_1473delCAG	c.(1471-1473)del	p.Q495del	MINK1_ENST00000347992.7_In_Frame_Del_p.Q495del|MINK1_ENST00000453408.3_In_Frame_Del_p.Q495del	NM_001024937.3|NM_015716.4|NM_153827.4	NP_001020108.1|NP_056531.1|NP_722549.2	Q8N4C8	MINK1_HUMAN	misshapen-like kinase 1	495					JNK cascade	cytoplasm	ATP binding|protein binding|protein serine/threonine kinase activity|small GTPase regulator activity			central_nervous_system(2)|large_intestine(1)|lung(1)|skin(1)|stomach(1)	6						gcttcagaaacagcagcagcagc	0.611													2	4	---	---	---	---					
LRRC37A11P	0	broad.mit.edu	37	17	37196001	37196002	+	RNA	DEL	AG	AG	-	rs34712077		TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr17:37196001_37196002delAG	ENST00000425901.2	+	0	2604					NR_033753.2																						GAATACAGACAGAAAAGAATTT	0.327													4	3	---	---	---	---					
KAT2A	2648	broad.mit.edu	37	17	40273004	40273005	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-WB-A81K-01A-11D-A35I-08	TCGA-WB-A81K-10A-01D-A35G-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	6c745e12-f34a-43b4-907f-25f18f3092ff	47fd631e-685a-4b72-8555-f76929369287	g.chr17:40273004_40273005delCT	ENST00000225916.5	-	1	371_372	c.318_319delAG	c.(316-321)ctggfs	p.LG106fs	CTD-2132N18.3_ENST00000592574.1_Intron	NM_021078.2	NP_066564.2	Q92830	KAT2A_HUMAN	K(lysine) acetyltransferase 2A	106					chromatin remodeling|histone deubiquitination|interspecies interaction between organisms|regulation of transcription from RNA polymerase II promoter|transcription from RNA polymerase II promoter	Ada2/Gcn5/Ada3 transcription activator complex|STAGA complex|transcription factor TFTC complex	H3 histone acetyltransferase activity|histone deacetylase binding|protein binding|transcription coactivator activity			central_nervous_system(1)|endometrium(3)|large_intestine(1)|lung(4)|ovary(1)|prostate(3)|skin(2)|upper_aerodigestive_tract(1)|urinary_tract(2)	18						GAGAAGACCCCTAGCTTCTCAA	0.693													2	4	---	---	---	---					
