Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample
LRRC7	57554	broad.mit.edu	37	1	70484494	70484494	+	Silent	SNP	T	T	C			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr1:70484494T>C	ENST00000310961.5	+	16	1732	c.1314T>C	c.(1312-1314)ggT>ggC	p.G438G	RP11-181B18.1_ENST00000414132.1_RNA|LRRC7_ENST00000415775.2_5'UTR|LRRC7_ENST00000035383.5_Silent_p.G433G			Q96NW7	LRRC7_HUMAN	leucine rich repeat containing 7	433						centrosome|focal adhesion|nucleolus	protein binding			breast(11)|central_nervous_system(3)|cervix(1)|endometrium(9)|haematopoietic_and_lymphoid_tissue(1)|kidney(7)|large_intestine(25)|liver(3)|lung(81)|ovary(9)|pancreas(1)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(4)|urinary_tract(2)	162						AGCCTCGTGGTGATGAAGGTA	0.393													8	27	---	---	---	---
XDH	7498	broad.mit.edu	37	2	31604515	31604515	+	Silent	SNP	C	C	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr2:31604515C>T	ENST00000379416.3	-	12	1164	c.1116G>A	c.(1114-1116)ctG>ctA	p.L372L		NM_000379.3	NP_000370.2	P47989	XDH_HUMAN	xanthine dehydrogenase	372	FAD-binding PCMH-type.				purine nucleotide catabolic process|xanthine catabolic process	cytosol|extracellular region|peroxisome	2 iron, 2 sulfur cluster binding|electron carrier activity|flavin adenine dinucleotide binding|iron ion binding|molybdopterin cofactor binding|protein homodimerization activity|xanthine dehydrogenase activity|xanthine oxidase activity			breast(3)|central_nervous_system(2)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(13)|lung(31)|ovary(1)|pancreas(1)|prostate(3)|skin(9)|urinary_tract(1)	74	Acute lymphoblastic leukemia(172;0.155)				Allopurinol(DB00437)|Carvedilol(DB01136)|Daunorubicin(DB00694)|Deferoxamine(DB00746)|Desflurane(DB01189)|Menadione(DB00170)|Mercaptopurine(DB01033)|Methotrexate(DB00563)|NADH(DB00157)|Nitrofurazone(DB00336)|Papaverine(DB01113)|Procarbazine(DB01168)|Pyrazinamide(DB00339)|Rasburicase(DB00049)|Spermine(DB00127)|Trifluoperazine(DB00831)|Vitamin E(DB00163)	ACACAAGTGTCAGCTTGGCCC	0.537													4	18	---	---	---	---
NYAP2	57624	broad.mit.edu	37	2	226378223	226378223	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr2:226378223T>C	ENST00000272907.6	+	3	771	c.358T>C	c.(358-360)Tcc>Ccc	p.S120P	NYAP2_ENST00000409269.2_Intron	NM_020864.1	NP_065915.1	Q9P242	K1486_HUMAN	neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	120																	GAGATCACAGTCCCTGCACTC	0.567													3	29	---	---	---	---
KIF1A	547	broad.mit.edu	37	2	241658545	241658545	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr2:241658545C>T	ENST00000498729.2	-	47	5338	c.5092G>A	c.(5092-5094)Gtg>Atg	p.V1698M	KIF1A_ENST00000320389.7_Missense_Mutation_p.V1597M	NM_001244008.1	NP_001230937.1	Q12756	KIF1A_HUMAN	kinesin family member 1A	1597					anterograde axon cargo transport	cytoplasm|microtubule|nucleus	ATP binding|microtubule motor activity			NS(1)|central_nervous_system(2)|endometrium(14)|haematopoietic_and_lymphoid_tissue(1)|kidney(6)|large_intestine(8)|lung(25)|ovary(1)|prostate(5)|skin(2)|urinary_tract(1)	66		all_epithelial(40;1.35e-15)|Breast(86;2.14e-05)|Renal(207;0.00183)|Ovarian(221;0.0228)|all_lung(227;0.0295)|all_neural(83;0.0459)|Lung NSC(271;0.0942)|all_hematologic(139;0.158)|Melanoma(123;0.16)|Hepatocellular(293;0.244)		Epithelial(32;6.12e-30)|all cancers(36;3.46e-27)|OV - Ovarian serous cystadenocarcinoma(60;1.38e-14)|Kidney(56;5e-09)|KIRC - Kidney renal clear cell carcinoma(57;5e-08)|BRCA - Breast invasive adenocarcinoma(100;5.87e-06)|Lung(119;0.00209)|LUSC - Lung squamous cell carcinoma(224;0.00902)|Colorectal(34;0.0282)|COAD - Colon adenocarcinoma(134;0.176)		CGCACCACCACGAAGCGCCTG	0.632													39	109	---	---	---	---
ATP2B2	491	broad.mit.edu	37	3	10443891	10443891	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr3:10443891C>T	ENST00000397077.1	-	6	1114	c.539G>A	c.(538-540)cGg>cAg	p.R180Q	ATP2B2_ENST00000360273.2_Missense_Mutation_p.R180Q|ATP2B2_ENST00000352432.4_Missense_Mutation_p.R180Q|ATP2B2_ENST00000343816.4_Missense_Mutation_p.R180Q|ATP2B2_ENST00000383800.4_Missense_Mutation_p.R180Q			Q01814	AT2B2_HUMAN	ATPase, Ca++ transporting, plasma membrane 2	180					ATP biosynthetic process|cytosolic calcium ion homeostasis|platelet activation	cytosol|integral to membrane|plasma membrane	ATP binding|calcium ion binding|calcium-transporting ATPase activity|calmodulin binding|metal ion binding|PDZ domain binding|protein C-terminus binding			breast(1)|central_nervous_system(2)|cervix(1)|endometrium(7)|large_intestine(19)|lung(29)|ovary(5)|prostate(2)|skin(4)|stomach(2)|urinary_tract(2)	74						CTGCAGGCCCCGGAACTGTTT	0.587													5	139	---	---	---	---
RBM46	166863	broad.mit.edu	37	4	155719382	155719382	+	Missense_Mutation	SNP	T	T	G			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr4:155719382T>G	ENST00000510397.1	+	3	750	c.571T>G	c.(571-573)Tat>Gat	p.Y191D	RBM46_ENST00000514866.1_Missense_Mutation_p.Y191D|RBM46_ENST00000281722.3_Missense_Mutation_p.Y191D	NM_001277173.1	NP_001264102.1	Q8TBY0	RBM46_HUMAN	RNA binding motif protein 46	191	RRM 2.						nucleotide binding|RNA binding			central_nervous_system(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(8)|lung(7)|skin(3)|urinary_tract(2)	26	all_hematologic(180;0.24)	Renal(120;0.0854)				ATTTGTGGAATATGAATCTCA	0.343													15	34	---	---	---	---
CTNNA1	1495	broad.mit.edu	37	5	138163328	138163328	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr5:138163328A>G	ENST00000302763.7	+	7	1073	c.983A>G	c.(982-984)gAc>gGc	p.D328G	CTNNA1_ENST00000355078.5_Missense_Mutation_p.D225G|CTNNA1_ENST00000518825.1_Missense_Mutation_p.D328G	NM_001903.2	NP_001894.2	P35221	CTNA1_HUMAN	catenin (cadherin-associated protein), alpha 1, 102kDa	328	Interaction with alpha-actinin.				adherens junction organization|apical junction assembly|cell adhesion|cellular response to indole-3-methanol|muscle cell differentiation|positive regulation of muscle cell differentiation	actin cytoskeleton|catenin complex|cytosol	beta-catenin binding|cadherin binding|gamma-catenin binding|structural molecule activity|vinculin binding			NS(1)|breast(7)|cervix(2)|endometrium(4)|kidney(6)|large_intestine(16)|lung(9)|oesophagus(2)|ovary(3)|prostate(1)|upper_aerodigestive_tract(1)	52			KIRC - Kidney renal clear cell carcinoma(527;0.00185)|Kidney(363;0.00325)			ACGCGTGATGACCGTCGTGAG	0.567													3	39	---	---	---	---
TBC1D32	221322	broad.mit.edu	37	6	121604993	121604993	+	Missense_Mutation	SNP	C	C	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr6:121604993C>T	ENST00000275159.6	-	13	1435	c.1436G>A	c.(1435-1437)tGt>tAt	p.C479Y	TBC1D32_ENST00000398212.2_Missense_Mutation_p.C479Y					TBC1 domain family, member 32																		CATCTTTGGACAACTTGGTGA	0.289													5	26	---	---	---	---
TMEM181	57583	broad.mit.edu	37	6	159046201	159046201	+	Silent	SNP	G	G	A			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr6:159046201G>A	ENST00000367090.3	+	12	1442	c.1431G>A	c.(1429-1431)gtG>gtA	p.V477V		NM_020823.1	NP_065874.1	Q9P2C4	TM181_HUMAN	transmembrane protein 181	477					pathogenesis	integral to membrane	toxin binding			central_nervous_system(1)|endometrium(5)|kidney(1)|large_intestine(4)|lung(8)|ovary(2)|skin(1)	22		Breast(66;0.000776)|Ovarian(120;0.0303)		OV - Ovarian serous cystadenocarcinoma(65;8.15e-18)|BRCA - Breast invasive adenocarcinoma(81;1.38e-05)		TCTTGATAGTGCGGGCGTGTT	0.537													5	99	---	---	---	---
TRBV4-2	28616	broad.mit.edu	37	7	142045528	142045528	+	RNA	SNP	T	T	A			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr7:142045528T>A	ENST00000390392.3	+	0	167																											GCAGTCCCCATGGAAACGGGA	0.473													22	96	---	---	---	---
CSPP1	79848	broad.mit.edu	37	8	68087551	68087551	+	Silent	SNP	C	C	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr8:68087551C>T	ENST00000262210.5	+	24	3005	c.2974C>T	c.(2974-2976)Ctg>Ttg	p.L992L	ARFGEF1_ENST00000520381.1_3'UTR|CSPP1_ENST00000521168.1_3'UTR|CSPP1_ENST00000412460.1_Silent_p.L647L	NM_024790.6	NP_079066.5	Q1MSJ5	CSPP1_HUMAN	centrosome and spindle pole associated protein 1	1027						centrosome|microtubule|spindle				NS(1)|breast(3)|endometrium(4)|kidney(3)|large_intestine(11)|lung(17)|ovary(5)|prostate(3)|skin(1)|urinary_tract(1)	49	Breast(64;0.214)	Lung NSC(129;0.0908)|all_lung(136;0.152)	Epithelial(68;0.00145)|OV - Ovarian serous cystadenocarcinoma(28;0.00589)|all cancers(69;0.0069)|BRCA - Breast invasive adenocarcinoma(89;0.153)			ACGAGTTGATCTGAAATTTAT	0.353													12	54	---	---	---	---
SEC31B	25956	broad.mit.edu	37	10	102257878	102257878	+	Missense_Mutation	SNP	C	C	A			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr10:102257878C>A	ENST00000370345.3	-	15	1868	c.1771G>T	c.(1771-1773)Gat>Tat	p.D591Y	SEC31B_ENST00000494350.1_5'UTR	NM_015490.3	NP_056305.1	Q9NQW1	SC31B_HUMAN	SEC31 homolog B (S. cerevisiae)	591					protein transport|vesicle-mediated transport	endoplasmic reticulum membrane|ER to Golgi transport vesicle membrane				NS(1)|breast(2)|cervix(1)|endometrium(6)|kidney(4)|large_intestine(3)|lung(17)|ovary(1)|urinary_tract(1)	36		Colorectal(252;0.117)		Epithelial(162;2.36e-10)|all cancers(201;2.09e-08)		ATAATGGCATCAGCAAAGCGC	0.557													13	33	---	---	---	---
MGMT	4255	broad.mit.edu	37	10	131506294	131506294	+	Silent	SNP	C	C	A	rs144397748		TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr10:131506294C>A	ENST00000306010.7	+	3	386	c.354C>A	c.(352-354)ccC>ccA	p.P118P	MGMT_ENST00000462672.1_3'UTR	NM_002412.3	NP_002403.2	B4DEE8	B4DEE8_HUMAN	O-6-methylguanine-DNA methyltransferase	118										breast(1)|haematopoietic_and_lymphoid_tissue(1)|large_intestine(2)|lung(2)|ovary(1)|prostate(1)|skin(1)|urinary_tract(1)	10		all_cancers(35;9.44e-09)|all_epithelial(44;6.98e-08)|Lung NSC(174;0.0157)|all_lung(145;0.0201)|all_neural(114;0.0732)|Colorectal(57;0.0792)|Breast(234;0.167)		OV - Ovarian serous cystadenocarcinoma(35;0.00291)		TTCACCATCCCGTTTTCCAGC	0.527								Direct reversal of damage					4	84	---	---	---	---
OR5M10	390167	broad.mit.edu	37	11	56344294	56344294	+	Missense_Mutation	SNP	G	G	C			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr11:56344294G>C	ENST00000526812.2	-	1	969	c.904C>G	c.(904-906)Caa>Gaa	p.Q302E		NM_001004741.1	NP_001004741.1	Q6IEU7	OR5MA_HUMAN	olfactory receptor, family 5, subfamily M, member 10	302					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			central_nervous_system(1)|cervix(1)|endometrium(2)|large_intestine(2)|lung(15)|upper_aerodigestive_tract(2)|urinary_tract(2)	25						ATCATTTGTTGTATGGCAAGG	0.378													5	169	---	---	---	---
TBK1	29110	broad.mit.edu	37	12	64890177	64890177	+	Missense_Mutation	SNP	A	A	G			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr12:64890177A>G	ENST00000331710.5	+	16	2090	c.1751A>G	c.(1750-1752)aAa>aGa	p.K584R		NM_013254.3	NP_037386.1	Q9UHD2	TBK1_HUMAN	TANK-binding kinase 1	584					I-kappaB kinase/NF-kappaB cascade|innate immune response|interspecies interaction between organisms|MyD88-independent toll-like receptor signaling pathway|negative regulation of type I interferon production|positive regulation of I-kappaB kinase/NF-kappaB cascade|positive regulation of interferon-alpha production|positive regulation of interferon-beta production|positive regulation of transcription from RNA polymerase II promoter|response to virus|Toll signaling pathway|toll-like receptor 3 signaling pathway|toll-like receptor 4 signaling pathway	cytosol|endosome membrane|plasma membrane	ATP binding|phosphoprotein binding|protein serine/threonine kinase activity			breast(2)|central_nervous_system(2)|large_intestine(7)|lung(7)|ovary(1)|pancreas(1)	20				GBM - Glioblastoma multiforme(28;0.0386)		CAAATCCACAAATTTGATAAG	0.214													3	69	---	---	---	---
MAP3K3	4215	broad.mit.edu	37	17	61744336	61744336	+	Missense_Mutation	SNP	G	G	T			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr17:61744336G>T	ENST00000361357.3	+	7	829	c.511G>T	c.(511-513)Gtg>Ttg	p.V171L	MAP3K3_ENST00000577395.1_Missense_Mutation_p.V140L|MAP3K3_ENST00000584573.1_Missense_Mutation_p.V171L|MAP3K3_ENST00000361733.3_Missense_Mutation_p.V140L|MAP3K3_ENST00000579585.1_Missense_Mutation_p.V171L	NM_203351.1	NP_976226.1	Q99759	M3K3_HUMAN	mitogen-activated protein kinase kinase kinase 3	140					MAPKKK cascade|positive regulation of I-kappaB kinase/NF-kappaB cascade|protein autophosphorylation	cytosol	ATP binding|MAP kinase kinase kinase activity|metal ion binding|protein binding			breast(1)|endometrium(4)|kidney(2)|large_intestine(6)|lung(10)|ovary(1)|prostate(1)|skin(2)|upper_aerodigestive_tract(1)	28						GTCCAGACAGGTGCGGATCAA	0.517													3	39	---	---	---	---
SLC35E1	79939	broad.mit.edu	37	19	16664533	16664533	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr19:16664533T>C	ENST00000595753.1	-	6	1207	c.1190A>G	c.(1189-1191)cAg>cGg	p.Q397R	CTD-3222D19.2_ENST00000409035.1_Intron	NM_024881.4	NP_079157.3	Q96K37	S35E1_HUMAN	solute carrier family 35, member E1	397					transport	integral to membrane				central_nervous_system(1)|endometrium(3)|large_intestine(7)|liver(1)|lung(2)|ovary(1)	15						TGGGTAGCTCTGCCGGCTGTA	0.562													5	103	---	---	---	---
GPCPD1	56261	broad.mit.edu	37	20	5556578	5556578	+	Missense_Mutation	SNP	T	T	C			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr20:5556578T>C	ENST00000379019.4	-	9	964	c.752A>G	c.(751-753)cAt>cGt	p.H251R	GPCPD1_ENST00000481038.1_5'UTR	NM_019593.3	NP_062539.1	Q9NPB8	GPCP1_HUMAN	glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	251					glycerol metabolic process|lipid metabolic process		carbohydrate binding|glycerophosphodiester phosphodiesterase activity			breast(1)|cervix(1)|endometrium(2)|kidney(1)|large_intestine(4)|lung(4)|ovary(2)|skin(1)	16						TGTACCCACATGTCCAGGAAG	0.398													12	28	---	---	---	---
HCK	3055	broad.mit.edu	37	20	30681780	30681780	+	Missense_Mutation	SNP	G	G	A			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr20:30681780G>A	ENST00000534862.1	+	12	1510	c.1147G>A	c.(1147-1149)Gcc>Acc	p.A383T	HCK_ENST00000518730.1_Missense_Mutation_p.A381T|HCK_ENST00000375862.2_Missense_Mutation_p.A402T|HCK_ENST00000520553.1_Missense_Mutation_p.A382T|HCK_ENST00000538448.1_Missense_Mutation_p.A382T|HCK_ENST00000375852.2_Missense_Mutation_p.A403T	NM_001172132.1	NP_001165603.1	P08631	HCK_HUMAN	hemopoietic cell kinase	403	Protein kinase.				interspecies interaction between organisms|mesoderm development|regulation of defense response to virus by virus|viral reproduction	caveola|cytosol	ATP binding|non-membrane spanning protein tyrosine kinase activity|protein binding			NS(1)|central_nervous_system(2)|endometrium(1)|haematopoietic_and_lymphoid_tissue(2)|kidney(1)|large_intestine(2)|lung(18)|ovary(2)|pancreas(1)|prostate(2)|skin(4)	36			UCEC - Uterine corpus endometrioid carcinoma (5;0.0241)			CTTTGGCCTGGCCCGGGTCAT	0.567													25	36	---	---	---	---
CCDC73	493860	broad.mit.edu	37	11	32697164	32697164	+	Frame_Shift_Del	DEL	T	T	-			TCGA-J4-A83N-01A-11D-A34U-08	TCGA-J4-A83N-10A-01D-A34X-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	fc3cdabd-8915-4d8e-99f6-84a7fa9bd27a	67b19aa7-53d6-481f-9a70-6667a6dfd141	g.chr11:32697164delT	ENST00000335185.5	-	9	635	c.592delA	c.(592-594)agafs	p.R198fs	CCDC73_ENST00000534415.1_5'UTR	NM_001008391.2	NP_001008392.2	Q6ZRK6	CCD73_HUMAN	coiled-coil domain containing 73	198										NS(1)|breast(1)|central_nervous_system(1)|cervix(1)|endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(5)|large_intestine(9)|lung(20)|ovary(2)|prostate(2)|skin(2)|stomach(1)|urinary_tract(2)	51	Breast(20;0.112)					GCTGAAAGTCTTTTGTTTGAT	0.259													24	44	---	---	---	---
