Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
C7orf27	221927	hgsc.bcm.edu	36	7	2545472	2545472	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CARD11	84433	hgsc.bcm.edu	36	7	2950577	2950577	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
WIPF3	644150	hgsc.bcm.edu	36	7	29890502	29890502	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
POU6F2	11281	hgsc.bcm.edu	36	7	39345948	39345948	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
HECW1	23072	hgsc.bcm.edu	36	7	43498222	43498222	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
HECW1	23072	hgsc.bcm.edu	36	7	43558454	43558454	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NACAD	23148	hgsc.bcm.edu	36	7	45090781	45090781	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
POM121L12	285877	hgsc.bcm.edu	36	7	53071481	53071481	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EGFR	1956	hgsc.bcm.edu	36	7	55177571	55177571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COL1A2	1278	hgsc.bcm.edu	36	7	93890361	93890361	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPHB4	2050	hgsc.bcm.edu	36	7	100255748	100255748	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC17	140453	hgsc.bcm.edu	36	7	100464952	100464952	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PIK3CG	5294	hgsc.bcm.edu	36	7	106300448	106300448	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LAMB4	22798	hgsc.bcm.edu	36	7	107530787	107530787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PRRT4	0	hgsc.bcm.edu	36	7	127778193	127778193	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PARP12	64761	hgsc.bcm.edu	36	7	139371031	139371031	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BRAF	673	hgsc.bcm.edu	36	7	140099596	140099596	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BRAF	673	hgsc.bcm.edu	36	7	140127875	140127875	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZYX	7791	hgsc.bcm.edu	36	7	142790130	142790130	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPHA1	2041	hgsc.bcm.edu	36	7	142804561	142804561	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KCNH2	3757	hgsc.bcm.edu	36	7	150280658	150280658	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATG9B	285973	hgsc.bcm.edu	36	7	150344805	150344805	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MLL3	58508	hgsc.bcm.edu	36	7	151476906	151476906	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TBC1D20	128637	hgsc.bcm.edu	36	20	367927	367927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CDS2	8760	hgsc.bcm.edu	36	20	5102229	5102229	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BPIL1	80341	hgsc.bcm.edu	36	20	31064275	31064275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CDK5RAP1	51654	hgsc.bcm.edu	36	20	31418445	31418445	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TRPC4AP	26133	hgsc.bcm.edu	36	20	33095977	33095977	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C20orf173	140873	hgsc.bcm.edu	36	20	33580427	33580427	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RBM12	10137	hgsc.bcm.edu	36	20	33704154	33704154	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NFS1	9054	hgsc.bcm.edu	36	20	33749900	33749900	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTPRT	11122	hgsc.bcm.edu	36	20	40164273	40164273	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NCOA3	8202	hgsc.bcm.edu	36	20	45697856	45697856	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NCOA3	8202	hgsc.bcm.edu	36	20	45697857	45697857	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ADRM1	11047	hgsc.bcm.edu	36	20	60316087	60316087	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CHRNA4	1137	hgsc.bcm.edu	36	20	61451682	61451682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SMARCB1	6598	hgsc.bcm.edu	36	22	22505874	22505874	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DEPDC5	9681	hgsc.bcm.edu	36	22	30569741	30569741	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C22orf28	51493	hgsc.bcm.edu	36	22	31122108	31122108	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DDX17	10521	hgsc.bcm.edu	36	22	37221856	37221856	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SREBF2	6721	hgsc.bcm.edu	36	22	40599920	40599920	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GTSE1	51512	hgsc.bcm.edu	36	22	45083413	45083413	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PLXNB2	23654	hgsc.bcm.edu	36	22	49063682	49063682	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ADM2	79924	hgsc.bcm.edu	36	22	49268030	49268030	+	Silent	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C14orf119	55017	hgsc.bcm.edu	36	14	22637098	22637098	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EFS	10278	hgsc.bcm.edu	36	14	22898446	22898446	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VRTN	0	hgsc.bcm.edu	36	14	73894834	73894834	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PSMC1	5700	hgsc.bcm.edu	36	14	89801215	89801215	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EVL	51466	hgsc.bcm.edu	36	14	99659634	99659634	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
WDR20	91833	hgsc.bcm.edu	36	14	101745252	101745252	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
AHNAK2	113146	hgsc.bcm.edu	36	14	104489390	104489390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC16	94025	hgsc.bcm.edu	36	19	8927829	8927829	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ICAM5	7087	hgsc.bcm.edu	36	19	10264920	10264920	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LDLR	3949	hgsc.bcm.edu	36	19	11091864	11091864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RAD23A	5886	hgsc.bcm.edu	36	19	12920032	12920032	+	Silent	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NFIX	4784	hgsc.bcm.edu	36	19	13047419	13047419	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SUGP2	0	hgsc.bcm.edu	36	19	18976059	18976059	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZNF568	374900	hgsc.bcm.edu	36	19	42107971	42107971	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SIPA1L3	23094	hgsc.bcm.edu	36	19	43282581	43282581	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
IRGQ	126298	hgsc.bcm.edu	36	19	48789294	48789294	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPS8L1	54869	hgsc.bcm.edu	36	19	60289653	60289653	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TEX15	56154	hgsc.bcm.edu	36	8	30823562	30823562	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SGK3	23678	hgsc.bcm.edu	36	8	67888664	67888664	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KCNB2	9312	hgsc.bcm.edu	36	8	74011494	74011494	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NBN	9048	hgsc.bcm.edu	36	8	91059705	91059705	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PDP1	54704	hgsc.bcm.edu	36	8	95003423	95003423	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RAD21	5885	hgsc.bcm.edu	36	8	117933418	117933418	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
HHLA1	10086	hgsc.bcm.edu	36	8	133161202	133161202	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FLJ43860	389690	hgsc.bcm.edu	36	8	142545796	142545796	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPPK1	83481	hgsc.bcm.edu	36	8	145018718	145018718	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPR172A	79581	hgsc.bcm.edu	36	8	145555400	145555400	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TNFRSF9	3604	hgsc.bcm.edu	36	1	7903500	7903500	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CASZ1	54897	hgsc.bcm.edu	36	1	10621763	10621763	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MTOR	2475	hgsc.bcm.edu	36	1	11110648	11110648	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VPS13D	55187	hgsc.bcm.edu	36	1	12310360	12310360	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NBL1	4681	hgsc.bcm.edu	36	1	19856071	19856071	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SEPN1	57190	hgsc.bcm.edu	36	1	26010935	26010935	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ARID1A	8289	hgsc.bcm.edu	36	1	26973985	26973985	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C1orf38	9473	hgsc.bcm.edu	36	1	28081858	28081858	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PHC2	1912	hgsc.bcm.edu	36	1	33608758	33608758	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CAP1	10487	hgsc.bcm.edu	36	1	40309229	40309229	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SLFNL1	200172	hgsc.bcm.edu	36	1	41254420	41254420	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MPL	4352	hgsc.bcm.edu	36	1	43587593	43587593	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ST6GALNAC5	81849	hgsc.bcm.edu	36	1	77106886	77106886	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RHOC	389	hgsc.bcm.edu	36	1	113045765	113045765	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PDE4DIP	9659	hgsc.bcm.edu	36	1	143705994	143705994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RBM8A	9939	hgsc.bcm.edu	36	1	144220374	144220374	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FLG	2312	hgsc.bcm.edu	36	1	150549436	150549436	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FLG	2312	hgsc.bcm.edu	36	1	150551252	150551252	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
IVL	3713	hgsc.bcm.edu	36	1	151149877	151149877	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NPR1	4881	hgsc.bcm.edu	36	1	151924123	151924123	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SHC1	6464	hgsc.bcm.edu	36	1	153209379	153209379	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C1orf104	284618	hgsc.bcm.edu	36	1	153557807	153557807	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ASTN1	460	hgsc.bcm.edu	36	1	175265430	175265430	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
B3GALT2	8707	hgsc.bcm.edu	36	1	191416650	191416650	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NFASC	23114	hgsc.bcm.edu	36	1	203252257	203252257	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MAPKAPK2	9261	hgsc.bcm.edu	36	1	204968762	204968762	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C1orf65	164127	hgsc.bcm.edu	36	1	221634738	221634738	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TRIM11	81559	hgsc.bcm.edu	36	1	226655481	226655481	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COG2	22796	hgsc.bcm.edu	36	1	228893840	228893840	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
B4GALNT4	338707	hgsc.bcm.edu	36	11	369598	369598	+	Silent	SNP	A	A	G	rs1134699	by2Hit2Allele;byCluster	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC5B	727897	hgsc.bcm.edu	36	11	1210309	1210309	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC5B	727897	hgsc.bcm.edu	36	11	1227514	1227514	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KRTAP5-1	387264	hgsc.bcm.edu	36	11	1563019	1563019	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TSPAN32	10077	hgsc.bcm.edu	36	11	2294443	2294443	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NAV2	89797	hgsc.bcm.edu	36	11	19924589	19924589	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C11orf9	745	hgsc.bcm.edu	36	11	61295950	61295950	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ROM1	6094	hgsc.bcm.edu	36	11	62137871	62137871	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RPS6KA4	8986	hgsc.bcm.edu	36	11	63885744	63885744	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SPTBN2	6712	hgsc.bcm.edu	36	11	66222693	66222693	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MYEOV	26579	hgsc.bcm.edu	36	11	68819732	68819732	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FAM86C	55199	hgsc.bcm.edu	36	11	71176239	71176239	+	Silent	SNP	C	C	G	rs12270466	by2Hit2Allele	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FAM86C	55199	hgsc.bcm.edu	36	11	71176249	71176249	+	Missense_Mutation	SNP	G	G	T	rs12283300	by2Hit2Allele;byHapMap	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RPS3	6188	hgsc.bcm.edu	36	11	74792732	74792732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KLHL35	283212	hgsc.bcm.edu	36	11	74815271	74815271	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CCDC81	60494	hgsc.bcm.edu	36	11	85803982	85803982	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATM	472	hgsc.bcm.edu	36	11	107644511	107644511	+	Missense_Mutation	SNP	A	A	G	rs35813135	byCluster;byFrequency	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATM	472	hgsc.bcm.edu	36	11	107686193	107686193	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PDZD3	79849	hgsc.bcm.edu	36	11	118564366	118564366	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CBL	867	hgsc.bcm.edu	36	11	118654455	118654455	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SCN3B	55800	hgsc.bcm.edu	36	11	123021642	123021642	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ETS1	2113	hgsc.bcm.edu	36	11	127860027	127860027	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FLOT1	10211	hgsc.bcm.edu	36	6	30817567	30817567	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DPCR1	135656	hgsc.bcm.edu	36	6	31026644	31026644	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
HLA-B	3106	hgsc.bcm.edu	36	6	31431095	31431095	+	Silent	SNP	C	C	T	rs1131446	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SLC39A7	7922	hgsc.bcm.edu	36	6	33279347	33279347	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANKS1A	23294	hgsc.bcm.edu	36	6	35156809	35156809	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FOXP4	116113	hgsc.bcm.edu	36	6	41664409	41664409	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EYS	346007	hgsc.bcm.edu	36	6	64494505	64494505	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CD109	135228	hgsc.bcm.edu	36	6	74574531	74574531	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SENP6	26054	hgsc.bcm.edu	36	6	76429803	76429803	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
REV3L	5980	hgsc.bcm.edu	36	6	111741343	111741343	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SHPRH	257218	hgsc.bcm.edu	36	6	146317727	146317727	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SYNE1	23345	hgsc.bcm.edu	36	6	152502834	152502834	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SYNE1	23345	hgsc.bcm.edu	36	6	152716489	152716489	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SYNE1	23345	hgsc.bcm.edu	36	6	152779654	152779654	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TP53	7157	hgsc.bcm.edu	36	17	7517819	7517819	+	Missense_Mutation	SNP	G	G	A	rs28934574	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KDM6B	23135	hgsc.bcm.edu	36	17	7690196	7690196	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NF1	4763	hgsc.bcm.edu	36	17	26551684	26551684	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NF1	4763	hgsc.bcm.edu	36	17	26688534	26688534	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TUBG2	27175	hgsc.bcm.edu	36	17	38065428	38065428	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
WNT3	7473	hgsc.bcm.edu	36	17	42206307	42206307	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EVPL	2125	hgsc.bcm.edu	36	17	71526181	71526181	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CANT1	124583	hgsc.bcm.edu	36	17	74504993	74504993	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ASPSCR1	79058	hgsc.bcm.edu	36	17	77567681	77567681	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CD7	924	hgsc.bcm.edu	36	17	77867468	77867468	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CD7	924	hgsc.bcm.edu	36	17	77867472	77867472	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZNF750	79755	hgsc.bcm.edu	36	17	78383225	78383225	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KRTAP6-3	337968	hgsc.bcm.edu	36	21	30886856	30886856	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RUNX1	861	hgsc.bcm.edu	36	21	35181020	35181020	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C21orf29	54084	hgsc.bcm.edu	36	21	44749132	44749132	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
UBE2G2	7327	hgsc.bcm.edu	36	21	45032419	45032419	+	Silent	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COL6A2	1292	hgsc.bcm.edu	36	21	46368994	46368994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TMEM8A	58986	hgsc.bcm.edu	36	16	365426	365426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZP2	7783	hgsc.bcm.edu	36	16	21120967	21120967	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATP2A1	487	hgsc.bcm.edu	36	16	28819588	28819588	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CA7	766	hgsc.bcm.edu	36	16	65442961	65442961	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CDH1	51343	hgsc.bcm.edu	36	16	67401611	67401611	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ADAMTS18	170692	hgsc.bcm.edu	36	16	75947468	75947468	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BANP	54971	hgsc.bcm.edu	36	16	86597286	86597286	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATP5A1	498	hgsc.bcm.edu	36	18	41923868	41923868	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SMAD4	4089	hgsc.bcm.edu	36	18	46845825	46845825	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CDH7	28513	hgsc.bcm.edu	36	18	61640394	61640394	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CNDP2	55748	hgsc.bcm.edu	36	18	70329184	70329184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VHL	7428	hgsc.bcm.edu	36	3	10163214	10163214	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VHL	7428	hgsc.bcm.edu	36	3	10163240	10163240	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VHL	7428	hgsc.bcm.edu	36	3	10163309	10163309	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VHL	7428	hgsc.bcm.edu	36	3	10163318	10163318	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TSEN2	80746	hgsc.bcm.edu	36	3	12533136	12533136	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MLH1	4292	hgsc.bcm.edu	36	3	37028594	37028594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DLEC1	9940	hgsc.bcm.edu	36	3	38079254	38079254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CTNNB1	1499	hgsc.bcm.edu	36	3	41241139	41241139	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BSN	8927	hgsc.bcm.edu	36	3	49673678	49673678	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TMEM115	11070	hgsc.bcm.edu	36	3	50371036	50371036	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ABHD14B	84836	hgsc.bcm.edu	36	3	51979150	51979150	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ACY1	95	hgsc.bcm.edu	36	3	51998046	51998046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FLNB	2317	hgsc.bcm.edu	36	3	58110644	58110644	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTPRG	5793	hgsc.bcm.edu	36	3	62128787	62128787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FRMD4B	23150	hgsc.bcm.edu	36	3	69326947	69326947	+	Silent	SNP	C	C	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPHA3	2042	hgsc.bcm.edu	36	3	89563150	89563150	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DZIP3	9666	hgsc.bcm.edu	36	3	109874109	109874109	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MYLK	4638	hgsc.bcm.edu	36	3	124815839	124815839	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZNF148	7707	hgsc.bcm.edu	36	3	126515055	126515055	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PLXNA1	5361	hgsc.bcm.edu	36	3	128215563	128215563	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PLXNA1	5361	hgsc.bcm.edu	36	3	128235506	128235506	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ISY1	339122	hgsc.bcm.edu	36	3	130335676	130335676	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NCK1	4690	hgsc.bcm.edu	36	3	138129653	138129653	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CLSTN2	64084	hgsc.bcm.edu	36	3	141764424	141764424	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATR	390502	hgsc.bcm.edu	36	3	143659181	143659181	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATR	390502	hgsc.bcm.edu	36	3	143686702	143686702	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MED12L	116931	hgsc.bcm.edu	36	3	152366329	152366329	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SHOX2	6474	hgsc.bcm.edu	36	3	159306244	159306244	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PIK3CA	5290	hgsc.bcm.edu	36	3	180419714	180419714	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PIK3CA	5290	hgsc.bcm.edu	36	3	180424573	180424573	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC4	4585	hgsc.bcm.edu	36	3	196996657	196996657	+	Silent	SNP	C	C	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC4	4585	hgsc.bcm.edu	36	3	196996892	196996892	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
UBXN7	26043	hgsc.bcm.edu	36	3	197573140	197573140	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MLF2	8079	hgsc.bcm.edu	36	12	6730170	6730170	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LRP6	4040	hgsc.bcm.edu	36	12	12288710	12288710	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BICD1	636	hgsc.bcm.edu	36	12	32372625	32372625	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PRICKLE1	144165	hgsc.bcm.edu	36	12	41140554	41140554	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TWF1	5756	hgsc.bcm.edu	36	12	42477799	42477799	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
OR6C4	341418	hgsc.bcm.edu	36	12	54231461	54231461	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NACA	4666	hgsc.bcm.edu	36	12	55397875	55397875	+	Missense_Mutation	SNP	A	A	G	rs12822307	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NACA	4666	hgsc.bcm.edu	36	12	55398199	55398199	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NACA	4666	hgsc.bcm.edu	36	12	55398289	55398289	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NR1H4	9971	hgsc.bcm.edu	36	12	99428953	99428953	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RIC8B	55188	hgsc.bcm.edu	36	12	105778249	105778249	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SELPLG	6404	hgsc.bcm.edu	36	12	107541571	107541571	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TCHP	84260	hgsc.bcm.edu	36	12	108825318	108825318	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TMEM132B	114795	hgsc.bcm.edu	36	12	124703049	124703049	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CASC5	57082	hgsc.bcm.edu	36	15	38707635	38707635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SPTBN5	51332	hgsc.bcm.edu	36	15	39954422	39954422	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TGM5	9333	hgsc.bcm.edu	36	15	41315112	41315112	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EFTUD1	79631	hgsc.bcm.edu	36	15	80320678	80320678	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NTRK3	4916	hgsc.bcm.edu	36	15	86479533	86479533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MCTP2	55784	hgsc.bcm.edu	36	15	92711861	92711861	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SYNM	23336	hgsc.bcm.edu	36	15	97490464	97490464	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PHKA2	5256	hgsc.bcm.edu	36	X	18864171	18864171	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RPS6KA3	6197	hgsc.bcm.edu	36	X	20123132	20123132	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CNGA2	1260	hgsc.bcm.edu	36	X	150658727	150658727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KIT	3815	hgsc.bcm.edu	36	4	55288358	55288358	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KIT	3815	hgsc.bcm.edu	36	4	55288389	55288389	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KIT	3815	hgsc.bcm.edu	36	4	55288422	55288422	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
IGFBP7	3490	hgsc.bcm.edu	36	4	57593448	57593448	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
EPHA5	2044	hgsc.bcm.edu	36	4	65968773	65968773	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DSPP	1834	hgsc.bcm.edu	36	4	88754037	88754037	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANK2	287	hgsc.bcm.edu	36	4	114494774	114494774	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NDST3	9348	hgsc.bcm.edu	36	4	119195304	119195304	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANKRD50	57182	hgsc.bcm.edu	36	4	125812178	125812178	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FBXW7	55294	hgsc.bcm.edu	36	4	153468834	153468834	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FBXW7	55294	hgsc.bcm.edu	36	4	153468906	153468906	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RXFP1	59350	hgsc.bcm.edu	36	4	159787568	159787568	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
APOB	338	hgsc.bcm.edu	36	2	21087318	21087318	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MAPRE3	22924	hgsc.bcm.edu	36	2	27102079	27102079	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C2orf71	388939	hgsc.bcm.edu	36	2	29147806	29147806	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SULT6B1	391365	hgsc.bcm.edu	36	2	37252191	37252191	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MSH2	4436	hgsc.bcm.edu	36	2	47561341	47561341	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LOXL3	84695	hgsc.bcm.edu	36	2	74630139	74630139	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TEKT4	150483	hgsc.bcm.edu	36	2	94904348	94904348	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C2orf29	55571	hgsc.bcm.edu	36	2	101240820	101240820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C2orf40	84417	hgsc.bcm.edu	36	2	106056872	106056872	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CHCHD5	84269	hgsc.bcm.edu	36	2	113060063	113060063	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FOXD4L1	200350	hgsc.bcm.edu	36	2	113974336	113974336	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
POTEF	728378	hgsc.bcm.edu	36	2	130586077	130586077	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FAM123C	205147	hgsc.bcm.edu	36	2	131236149	131236149	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LCT	3938	hgsc.bcm.edu	36	2	136298000	136298000	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ITGB6	3694	hgsc.bcm.edu	36	2	160760168	160760168	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SCN2A	6326	hgsc.bcm.edu	36	2	165880421	165880421	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PPIG	9360	hgsc.bcm.edu	36	2	170197957	170197957	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TTN	7273	hgsc.bcm.edu	36	2	179181599	179181599	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TTN	7273	hgsc.bcm.edu	36	2	179343452	179343452	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TTN	7273	hgsc.bcm.edu	36	2	179344432	179344432	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANKRD44	91526	hgsc.bcm.edu	36	2	197574745	197574745	+	Silent	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COQ10B	80219	hgsc.bcm.edu	36	2	198026574	198026574	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SATB2	23314	hgsc.bcm.edu	36	2	199921770	199921770	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KCTD18	130535	hgsc.bcm.edu	36	2	201079902	201079902	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPBAR1	151306	hgsc.bcm.edu	36	2	218836483	218836483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SPEG	10290	hgsc.bcm.edu	36	2	220045964	220045964	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NGEF	25791	hgsc.bcm.edu	36	2	233547756	233547756	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANKMY1	51281	hgsc.bcm.edu	36	2	241143011	241143011	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
AK3	50808	hgsc.bcm.edu	36	9	4709198	4709198	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
JAK2	3717	hgsc.bcm.edu	36	9	5060030	5060030	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
JAK2	3717	hgsc.bcm.edu	36	9	5060046	5060046	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CDKN2A	1029	hgsc.bcm.edu	36	9	21960944	21960944	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CLTA	1211	hgsc.bcm.edu	36	9	36181149	36181149	+	Silent	SNP	T	T	C	rs2274524	by2Hit2Allele;byCluster;byFrequency	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ECM2	1842	hgsc.bcm.edu	36	9	94324935	94324935	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTCH1	5727	hgsc.bcm.edu	36	9	97279703	97279703	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTCH1	5727	hgsc.bcm.edu	36	9	97287907	97287907	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ABCA1	19	hgsc.bcm.edu	36	9	106624675	106624675	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ABL1	25	hgsc.bcm.edu	36	9	132749951	132749951	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FIBCD1	84929	hgsc.bcm.edu	36	9	132777043	132777043	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
C9orf171	389799	hgsc.bcm.edu	36	9	134364696	134364696	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RALGDS	5900	hgsc.bcm.edu	36	9	134973267	134973267	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COL5A1	1289	hgsc.bcm.edu	36	9	136763782	136763782	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MTUS2	0	hgsc.bcm.edu	36	13	28960047	28960047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
WBP4	11193	hgsc.bcm.edu	36	13	40537401	40537401	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SLITRK5	26050	hgsc.bcm.edu	36	13	87126217	87126217	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TMTC4	84899	hgsc.bcm.edu	36	13	100114493	100114493	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ANKRD10	55608	hgsc.bcm.edu	36	13	110343497	110343497	+	Silent	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
KIAA1217	56243	hgsc.bcm.edu	36	10	24875181	24875181	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MYPN	84665	hgsc.bcm.edu	36	10	69603952	69603952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTEN	5728	hgsc.bcm.edu	36	10	89682890	89682890	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PTEN	5728	hgsc.bcm.edu	36	10	89682940	89682940	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CWF19L1	55280	hgsc.bcm.edu	36	10	101983020	101983020	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SEMA4G	57715	hgsc.bcm.edu	36	10	102727404	102727404	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
VWA2	340706	hgsc.bcm.edu	36	10	116028567	116028567	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ATRNL1	26033	hgsc.bcm.edu	36	10	117049707	117049707	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BAG3	9531	hgsc.bcm.edu	36	10	121422084	121422084	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
TACC2	10579	hgsc.bcm.edu	36	10	123832767	123832767	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
BCCIP	56647	hgsc.bcm.edu	36	10	127505170	127505170	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NKD2	85409	hgsc.bcm.edu	36	5	1091205	1091205	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
RXFP3	51289	hgsc.bcm.edu	36	5	33973376	33973376	+	Silent	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
UGT3A1	133688	hgsc.bcm.edu	36	5	35990210	35990210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SLC1A3	6507	hgsc.bcm.edu	36	5	36716331	36716331	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
NNT	23530	hgsc.bcm.edu	36	5	43685115	43685115	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DIMT1L	27292	hgsc.bcm.edu	36	5	61730452	61730452	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
POLK	51426	hgsc.bcm.edu	36	5	74916372	74916372	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
AP3B1	8546	hgsc.bcm.edu	36	5	77559753	77559753	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CHD1	1105	hgsc.bcm.edu	36	5	98244897	98244897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
APC	324	hgsc.bcm.edu	36	5	112201748	112201748	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
APC	324	hgsc.bcm.edu	36	5	112203114	112203114	+	Silent	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
APC	324	hgsc.bcm.edu	36	5	112203388	112203388	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SNX2	6643	hgsc.bcm.edu	36	5	122182535	122182535	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SMAD5	4090	hgsc.bcm.edu	36	5	135526870	135526870	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SRA1	58506	hgsc.bcm.edu	36	5	139911893	139911893	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PCDHGA10	56106	hgsc.bcm.edu	36	5	140774913	140774913	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
YIPF5	81555	hgsc.bcm.edu	36	5	143525226	143525226	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GABRP	2568	hgsc.bcm.edu	36	5	170171763	170171763	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SH3PXD2B	285590	hgsc.bcm.edu	36	5	171705860	171705860	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DBN1	1627	hgsc.bcm.edu	36	5	176817070	176817070	+	Silent	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
DOK3	79930	hgsc.bcm.edu	36	5	176862780	176862780	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
COL28A1	340267	hgsc.bcm.edu	36	7	7379704	7379704	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
AHNAK2	113146	hgsc.bcm.edu	36	14	104494073	104494073	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
PLEKHN1	84069	hgsc.bcm.edu	36	1	898427	898427	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
USH2A	7399	hgsc.bcm.edu	36	1	213869002	213869002	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
SERINC2	347735	hgsc.bcm.edu	36	1	31678476	31678477	+	In_Frame_Ins	INS	-	-	CAG	rs3050461	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
FANCD2	2177	hgsc.bcm.edu	36	3	10063408	10063408	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
APC	324	hgsc.bcm.edu	36	5	112203047	112203047	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPRIN1	114787	hgsc.bcm.edu	36	5	175958726	175958749	+	In_Frame_Del	DEL	CTCAAAGACCCAGGATCCTCCTTC	CTCAAAGACCCAGGATCCTCCTTC	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	CTCAAAGACCCAGGATCCTCCTTC	CTCAAAGACCCAGGATCCTCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPRC6A	222545	hgsc.bcm.edu	36	6	117220455	117220456	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPRC6A	222545	hgsc.bcm.edu	36	6	117220458	117220459	+	In_Frame_Ins	INS	-	-	TCC	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MUC2	4583	hgsc.bcm.edu	36	11	1082802	1082802	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
CD7	924	hgsc.bcm.edu	36	17	77867431	77867457	+	In_Frame_Del	DEL	CAGGGAGGGCAGAGGCTGCTGGCGGGT	CAGGGAGGGCAGAGGCTGCTGGCGGGT	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	CAGGGAGGGCAGAGGCTGCTGGCGGGT	CAGGGAGGGCAGAGGCTGCTGGCGGGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
POLI	11201	hgsc.bcm.edu	36	18	50049956	50049958	+	In_Frame_Del	DEL	CGA	CGA	-	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	CGA	CGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
LSR	51599	hgsc.bcm.edu	36	19	40450115	40450116	+	In_Frame_Ins	INS	-	-	GGA	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
MYBL2	4605	hgsc.bcm.edu	36	20	41743895	41743896	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-EF-5830-01A-01D-1657-10	TCGA-EF-5830-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	61fe838a-d218-407a-922a-7cb9b4fc8aa8	243fcf8d-0c9e-48cb-b0ae-08fc55a84f86
