Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
PHF14	9678	hgsc.bcm.edu	36	7	11043223	11043223	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
DNAH11	8701	hgsc.bcm.edu	36	7	21872755	21872755	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
WIPF3	644150	hgsc.bcm.edu	36	7	29895499	29895499	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
HERPUD2	64224	hgsc.bcm.edu	36	7	35641356	35641356	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FIGNL1	63979	hgsc.bcm.edu	36	7	50482268	50482268	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRRAP	8295	hgsc.bcm.edu	36	7	98331347	98331347	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RBM28	55131	hgsc.bcm.edu	36	7	127740536	127740536	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRIM24	8805	hgsc.bcm.edu	36	7	137886411	137886411	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
DENND2A	27147	hgsc.bcm.edu	36	7	139915974	139915974	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
BRAF	673	hgsc.bcm.edu	36	7	140099640	140099640	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
BRAF	673	hgsc.bcm.edu	36	7	140127897	140127897	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EPHB6	2051	hgsc.bcm.edu	36	7	142272141	142272141	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
GIMAP7	168537	hgsc.bcm.edu	36	7	149848173	149848173	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RHEB	6009	hgsc.bcm.edu	36	7	150798636	150798636	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SEL1L2	80343	hgsc.bcm.edu	36	20	13778868	13778868	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CST9	128822	hgsc.bcm.edu	36	20	23532222	23532222	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C20orf177	63939	hgsc.bcm.edu	36	20	57952867	57952867	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EP300	2033	hgsc.bcm.edu	36	22	39902456	39902456	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MBIP	51562	hgsc.bcm.edu	36	14	35847093	35847093	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MDGA2	161357	hgsc.bcm.edu	36	14	46670713	46670713	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FRMD6	122786	hgsc.bcm.edu	36	14	51256616	51256616	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MTHFD1	4522	hgsc.bcm.edu	36	14	63956328	63956328	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADCK1	57143	hgsc.bcm.edu	36	14	77355179	77355179	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NLGN4Y	22829	hgsc.bcm.edu	36	Y	15462512	15462512	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C3	718	hgsc.bcm.edu	36	19	6641729	6641729	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADAMTS10	81794	hgsc.bcm.edu	36	19	8571923	8571923	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZSWIM4	65249	hgsc.bcm.edu	36	19	13789045	13789045	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SLC5A5	6528	hgsc.bcm.edu	36	19	17853829	17853829	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
LSR	51599	hgsc.bcm.edu	36	19	40450202	40450202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FPR1	2357	hgsc.bcm.edu	36	19	56941711	56941711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADAM18	8749	hgsc.bcm.edu	36	8	39614298	39614298	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
HGSNAT	138050	hgsc.bcm.edu	36	8	43146667	43146667	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MOS	55034	hgsc.bcm.edu	36	8	57188575	57188575	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OTUD6B	51633	hgsc.bcm.edu	36	8	92151786	92151786	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EIF3E	3646	hgsc.bcm.edu	36	8	109309779	109309779	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TG	7038	hgsc.bcm.edu	36	8	133994691	133994691	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EBNA1BP2	10969	hgsc.bcm.edu	36	1	43409033	43409033	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KIAA0494	100130197	hgsc.bcm.edu	36	1	46956258	46956258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SLC16A1	6566	hgsc.bcm.edu	36	1	113266204	113266204	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TCHH	7062	hgsc.bcm.edu	36	1	150352050	150352050	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FCRL1	115350	hgsc.bcm.edu	36	1	156038511	156038511	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SPTA1	6708	hgsc.bcm.edu	36	1	156889743	156889743	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NCF2	4688	hgsc.bcm.edu	36	1	181799249	181799249	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C1orf26	54823	hgsc.bcm.edu	36	1	183438410	183438410	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CACNA1S	779	hgsc.bcm.edu	36	1	199284360	199284360	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
VASH2	79805	hgsc.bcm.edu	36	1	211191660	211191660	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZNF678	339500	hgsc.bcm.edu	36	1	225909159	225909159	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OBSCN	84033	hgsc.bcm.edu	36	1	226592333	226592333	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRIM58	25893	hgsc.bcm.edu	36	1	246097775	246097775	+	Silent	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OR2M4	26245	hgsc.bcm.edu	36	1	246469189	246469189	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MUC2	4583	hgsc.bcm.edu	36	11	1073833	1073833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MUC5B	727897	hgsc.bcm.edu	36	11	1220427	1220427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UBQLN3	50613	hgsc.bcm.edu	36	11	5487016	5487016	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CTR9	9646	hgsc.bcm.edu	36	11	10746504	10746504	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
LRRC4C	57689	hgsc.bcm.edu	36	11	40093536	40093536	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CHRM1	1128	hgsc.bcm.edu	36	11	62434822	62434822	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UVRAG	7405	hgsc.bcm.edu	36	11	75268629	75268629	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ATM	472	hgsc.bcm.edu	36	11	107686149	107686149	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ATM	472	hgsc.bcm.edu	36	11	107741282	107741282	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZC3H12C	85463	hgsc.bcm.edu	36	11	109540381	109540381	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OR6X1	390260	hgsc.bcm.edu	36	11	123130087	123130087	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OR10G4	390264	hgsc.bcm.edu	36	11	123392034	123392034	+	Silent	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CDON	50937	hgsc.bcm.edu	36	11	125393448	125393448	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TPMT	7172	hgsc.bcm.edu	36	6	18257249	18257249	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PSORS1C2	170680	hgsc.bcm.edu	36	6	31213771	31213771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
HSPA1L	3305	hgsc.bcm.edu	36	6	31886942	31886942	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
HLA-DPA1	3113	hgsc.bcm.edu	36	6	33145486	33145486	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
STK38	11329	hgsc.bcm.edu	36	6	36615905	36615905	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UBR2	23304	hgsc.bcm.edu	36	6	42755470	42755470	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PHF3	23469	hgsc.bcm.edu	36	6	64481130	64481130	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MYO6	4646	hgsc.bcm.edu	36	6	76623568	76623568	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EPHA7	2045	hgsc.bcm.edu	36	6	94123204	94123204	+	Silent	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
GRIK2	2901	hgsc.bcm.edu	36	6	102622980	102622980	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRAF3IP2	10758	hgsc.bcm.edu	36	6	111990881	111990881	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FAM184A	79632	hgsc.bcm.edu	36	6	119343119	119343119	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UST	10090	hgsc.bcm.edu	36	6	149304218	149304218	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
QKI	9444	hgsc.bcm.edu	36	6	163907747	163907747	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZZEF1	23140	hgsc.bcm.edu	36	17	3882287	3882287	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TP53	7157	hgsc.bcm.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MYH2	4620	hgsc.bcm.edu	36	17	10377329	10377329	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FLCN	201163	hgsc.bcm.edu	36	17	17072174	17072174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NF1	4763	hgsc.bcm.edu	36	17	26510171	26510171	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NF1	4763	hgsc.bcm.edu	36	17	26708127	26708127	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
GAS2L2	246176	hgsc.bcm.edu	36	17	31097097	31097097	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CDC27	996	hgsc.bcm.edu	36	17	42569660	42569660	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ITGB3	3690	hgsc.bcm.edu	36	17	42723325	42723325	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KIF2B	84643	hgsc.bcm.edu	36	17	49256681	49256681	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
BRIP1	83990	hgsc.bcm.edu	36	17	57115923	57115923	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ACE	1636	hgsc.bcm.edu	36	17	58928019	58928019	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ABCA6	23460	hgsc.bcm.edu	36	17	64590623	64590623	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SLC39A11	201266	hgsc.bcm.edu	36	17	68539392	68539392	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRPM2	7226	hgsc.bcm.edu	36	21	44679474	44679474	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MEFV	4210	hgsc.bcm.edu	36	16	3233378	3233378	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MYH11	4629	hgsc.bcm.edu	36	16	15777487	15777487	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
GTF3C1	2975	hgsc.bcm.edu	36	16	27416610	27416610	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SPNS1	83985	hgsc.bcm.edu	36	16	28896809	28896809	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MMP2	4313	hgsc.bcm.edu	36	16	54077071	54077071	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SLC6A2	6530	hgsc.bcm.edu	36	16	54286746	54286746	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CDH8	1006	hgsc.bcm.edu	36	16	60412361	60412361	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NAE1	8883	hgsc.bcm.edu	36	16	65400416	65400416	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
WDR59	79726	hgsc.bcm.edu	36	16	73465749	73465749	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
GAN	8139	hgsc.bcm.edu	36	16	79942738	79942738	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZNF521	25925	hgsc.bcm.edu	36	18	21061392	21061392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CDH2	1000	hgsc.bcm.edu	36	18	23816999	23816999	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ACAA2	10449	hgsc.bcm.edu	36	18	45565572	45565572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
DCC	1630	hgsc.bcm.edu	36	18	49279776	49279776	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
STARD6	147323	hgsc.bcm.edu	36	18	50105240	50105240	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CCBE1	147372	hgsc.bcm.edu	36	18	55254305	55254305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SRGAP3	9901	hgsc.bcm.edu	36	3	9009656	9009656	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MLH1	4292	hgsc.bcm.edu	36	3	37025328	37025328	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CTNNB1	1499	hgsc.bcm.edu	36	3	41241201	41241201	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SETD2	29072	hgsc.bcm.edu	36	3	47119864	47119864	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CELSR3	1951	hgsc.bcm.edu	36	3	48672382	48672382	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ITIH3	3699	hgsc.bcm.edu	36	3	52803907	52803907	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ROBO1	6091	hgsc.bcm.edu	36	3	78749846	78749846	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
OSBPL11	114885	hgsc.bcm.edu	36	3	126777839	126777839	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
COL6A6	131873	hgsc.bcm.edu	36	3	131783250	131783250	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TNIK	23043	hgsc.bcm.edu	36	3	172367703	172367703	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PIK3CA	5290	hgsc.bcm.edu	36	3	180430544	180430544	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
LRCH3	84859	hgsc.bcm.edu	36	3	199038148	199038148	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FGF23	8074	hgsc.bcm.edu	36	12	4352092	4352092	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
VWF	7450	hgsc.bcm.edu	36	12	5998561	5998561	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CLEC2B	51266	hgsc.bcm.edu	36	12	9901394	9901394	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C12orf39	80763	hgsc.bcm.edu	36	12	21573263	21573263	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADAMTS20	80070	hgsc.bcm.edu	36	12	42063984	42063984	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KRT81	3887	hgsc.bcm.edu	36	12	50967337	50967337	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KRT77	374454	hgsc.bcm.edu	36	12	51377894	51377894	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
R3HDM2	22864	hgsc.bcm.edu	36	12	55934910	55934910	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FGD6	55785	hgsc.bcm.edu	36	12	94128212	94128212	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UTP20	27340	hgsc.bcm.edu	36	12	100283422	100283422	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SETD1B	23067	hgsc.bcm.edu	36	12	120741728	120741728	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KNTC1	9735	hgsc.bcm.edu	36	12	121607954	121607954	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NCOR2	9612	hgsc.bcm.edu	36	12	123387635	123387635	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TJP1	7082	hgsc.bcm.edu	36	15	27798265	27798265	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TRIM69	140691	hgsc.bcm.edu	36	15	42834805	42834805	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EFTUD1	79631	hgsc.bcm.edu	36	15	80231033	80231033	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TM2D3	80213	hgsc.bcm.edu	36	15	100009479	100009479	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MAGEB2	4113	hgsc.bcm.edu	36	X	30147315	30147315	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PRRG1	5638	hgsc.bcm.edu	36	X	37197316	37197316	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
AKAP4	8852	hgsc.bcm.edu	36	X	49844433	49844433	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
WNK3	65267	hgsc.bcm.edu	36	X	54276083	54276083	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ASB12	142689	hgsc.bcm.edu	36	X	63361883	63361883	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PCDH19	57575	hgsc.bcm.edu	36	X	99548712	99548712	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
COL4A6	1288	hgsc.bcm.edu	36	X	107289509	107289509	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
IGSF1	3547	hgsc.bcm.edu	36	X	130236328	130236328	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
F8	2157	hgsc.bcm.edu	36	X	153812817	153812817	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CCKAR	886	hgsc.bcm.edu	36	4	26092696	26092696	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
AASDH	132949	hgsc.bcm.edu	36	4	56910753	56910753	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UGT2A3	79799	hgsc.bcm.edu	36	4	69851682	69851682	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FRAS1	80144	hgsc.bcm.edu	36	4	79619674	79619674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NKX6-1	4825	hgsc.bcm.edu	36	4	85637798	85637798	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C4orf21	55345	hgsc.bcm.edu	36	4	113681699	113681699	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
FBXW7	55294	hgsc.bcm.edu	36	4	153466813	153466813	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADAM17	6868	hgsc.bcm.edu	36	2	9550499	9550499	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RBKS	64080	hgsc.bcm.edu	36	2	27904044	27904044	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RTKN	6242	hgsc.bcm.edu	36	2	74507078	74507078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RANBP2	5903	hgsc.bcm.edu	36	2	108734807	108734807	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
LRP1B	53353	hgsc.bcm.edu	36	2	140983977	140983977	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ASNSD1	54529	hgsc.bcm.edu	36	2	190240271	190240271	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KLF7	8609	hgsc.bcm.edu	36	2	207696804	207696804	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
IDH1	3417	hgsc.bcm.edu	36	2	208812194	208812194	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PTPRN	5798	hgsc.bcm.edu	36	2	219869445	219869445	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SGPP2	130367	hgsc.bcm.edu	36	2	223131411	223131411	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KLHL9	55958	hgsc.bcm.edu	36	9	21323629	21323629	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
VPS13A	23230	hgsc.bcm.edu	36	9	79014254	79014254	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
NTRK2	4915	hgsc.bcm.edu	36	9	86753283	86753283	+	Silent	SNP	C	C	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
AGTPBP1	23287	hgsc.bcm.edu	36	9	87437806	87437806	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ADAMTS13	11093	hgsc.bcm.edu	36	9	135311124	135311124	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SLC7A1	6541	hgsc.bcm.edu	36	13	29002812	29002812	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ANKRD10	55608	hgsc.bcm.edu	36	13	110343498	110343498	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MYO3A	53904	hgsc.bcm.edu	36	10	26425371	26425371	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
EGR2	1959	hgsc.bcm.edu	36	10	64243441	64243441	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
LRRTM3	347731	hgsc.bcm.edu	36	10	68357513	68357513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
TTC18	118491	hgsc.bcm.edu	36	10	74741627	74741627	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PTEN	5728	hgsc.bcm.edu	36	10	89614283	89614283	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
BTRC	8945	hgsc.bcm.edu	36	10	103211767	103211767	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C10orf79	80217	hgsc.bcm.edu	36	10	105934773	105934773	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CHST15	51363	hgsc.bcm.edu	36	10	125770801	125770801	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C5orf49	134121	hgsc.bcm.edu	36	5	7888501	7888501	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MAP1B	4131	hgsc.bcm.edu	36	5	71525914	71525914	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
APC	324	hgsc.bcm.edu	36	5	112202495	112202495	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
APC	324	hgsc.bcm.edu	36	5	112203322	112203322	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SMAD5	4090	hgsc.bcm.edu	36	5	135517704	135517704	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PCDHA5	56143	hgsc.bcm.edu	36	5	140183682	140183682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SCGB3A2	117156	hgsc.bcm.edu	36	5	147241288	147241288	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZNF354C	30832	hgsc.bcm.edu	36	5	178438431	178438431	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
UGT2B28	54490	hgsc.bcm.edu	36	4	70191119	70191119	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ZNF717	100131827	hgsc.bcm.edu	36	3	75869451	75869451	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MUC4	4585	hgsc.bcm.edu	36	3	196991050	196991097	+	In_Frame_Del	DEL	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
MUC4	4585	hgsc.bcm.edu	36	3	196991492	196991539	+	In_Frame_Del	DEL	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KRTAP5-2	440021	hgsc.bcm.edu	36	11	1575749	1575778	+	In_Frame_Del	DEL	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CASP5	838	hgsc.bcm.edu	36	11	104384897	104384897	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
CEP290	80184	hgsc.bcm.edu	36	12	87036436	87036436	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
ACIN1	22985	hgsc.bcm.edu	36	14	22618623	22618624	+	In_Frame_Ins	INS	-	-	GAACGT	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
AAGAB	0	hgsc.bcm.edu	36	15	65282249	65282250	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
C16orf57	79650	hgsc.bcm.edu	36	16	56605688	56605689	+	Frame_Shift_Ins	INS	-	-	CTGC	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
PLEKHH3	79990	hgsc.bcm.edu	36	17	38077018	38077019	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
SHROOM4	57477	hgsc.bcm.edu	36	X	50367498	50367499	+	In_Frame_Ins	INS	-	-	TGCTGCTGCTGT	novel	unknown	TCGA-F5-6813-01A-11D-1826-10	TCGA-F5-6813-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a1a70ad7-3e5b-4d2a-966b-c42bbdcb200a	23581057-9765-403e-b67a-3049a0050b84
