Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	isArtifactMode	oxoGCut	pox	pox_cutoff	qox	t_alt_count	t_ref_count	validation_alt_allele	validation_tumor_sample							
PTGFR	5737	broad.mit.edu	37	1	78958508	78958508	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr1:78958508G>A	uc001din.2	+	2	346	c.80G>A	c.(79-81)CGG>CAG	p.R27Q	PTGFR_uc001dim.2_Missense_Mutation_p.R27Q	NM_000959	NP_000950	P43088	PF2R_HUMAN	prostaglandin F receptor isoform a precursor	27	Extracellular (Potential).				parturition	extracellular region|integral to plasma membrane	prostaglandin F receptor activity			ovary(3)|breast(2)|skin(1)	6				Colorectal(170;0.248)	Bimatoprost(DB00905)|Latanoprost(DB00654)|Travoprost(DB00287)	ACGGAAAACCGGCTTTCCGTA	0.438		NaN											0	0	0	0.001168	0	5	54									
NBPF14	25832	broad.mit.edu	37	1	148015635	148015635	+	Silent	SNP	A	A	C			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr1:148015635A>C	uc001eqq.2	-	8	1013	c.996T>G	c.(994-996)GTT>GTG	p.V332V	LOC200030_uc001eqe.2_Intron|LOC200030_uc001eqf.2_Intron|LOC200030_uc001eqg.2_Intron|FLJ39739_uc001eqo.1_Intron|NBPF14_uc010pab.1_Intron|NBPF14_uc010pac.1_Intron|NBPF14_uc001eqx.2_Intron|NBPF14_uc010pae.1_Intron|NBPF14_uc010paf.1_Intron|NBPF14_uc001eqs.1_Silent_p.V211V	NM_015383	NP_056198	Q5TI25	NBPFE_HUMAN	hypothetical protein LOC25832	332	NBPF 3.					cytoplasm				ovary(1)	1	all_hematologic(923;0.032)					CATCCATGTTAACAGCCAAGC	0.468		NaN											0	0	0	0.004672	0	2	3									
ANKRD2	26287	broad.mit.edu	37	10	99338106	99338106	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr10:99338106G>A	uc001knw.2	+	3	589	c.380G>A	c.(379-381)CGG>CAG	p.R127Q	ANKRD2_uc009xvu.2_Missense_Mutation_p.R127Q	NM_020349	NP_065082	Q9GZV1	ANKR2_HUMAN	ankyrin repeat domain 2 isoform a	127					muscle contraction|muscle organ development		structural constituent of muscle				0		all_hematologic(284;1.95e-06)|Colorectal(252;0.0163)		Epithelial(162;1.18e-94)|all cancers(201;9.31e-86)|BRCA - Breast invasive adenocarcinoma(275;0.0233)|STAD - Stomach adenocarcinoma(243;0.181)|KIRC - Kidney renal clear cell carcinoma(50;0.206)|Kidney(138;0.241)		CAGAAGAAGCGGGACGCTCTG	0.687		NaN											0	0	0	0.008291	0	9	60									
PNLIP	5406	broad.mit.edu	37	10	118314751	118314751	+	Silent	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr10:118314751C>T	uc001lcm.2	+	7	676	c.633C>T	c.(631-633)AGC>AGT	p.S211S		NM_000936	NP_000927	P16233	LIPP_HUMAN	pancreatic lipase precursor	211					lipid catabolic process|retinoid metabolic process|steroid metabolic process	extracellular region	retinyl-palmitate esterase activity|triglyceride lipase activity			ovary(1)|central_nervous_system(1)|skin(1)	3				all cancers(201;0.0131)	Bentiromide(DB00522)|Orlistat(DB01083)	TGGACCCCAGCGATGCCAAAT	0.483		NaN											0	0	0	0.00499	0	14	56									
ATG16L2	89849	broad.mit.edu	37	11	72536397	72536397	+	Missense_Mutation	SNP	C	C	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr11:72536397C>A	uc001otd.2	+	10	1087	c.1047C>A	c.(1045-1047)AGC>AGA	p.S349R	ATG16L2_uc001ote.2_Missense_Mutation_p.S243R|ATG16L2_uc009ytj.1_Intron|ATG16L2_uc001otf.2_Missense_Mutation_p.S104R|ATG16L2_uc001otg.2_Missense_Mutation_p.S83R|ATG16L2_uc009ytk.2_Missense_Mutation_p.S104R	NM_033388	NP_203746	Q8NAA4	A16L2_HUMAN	ATG16 autophagy related 16-like 2	349	WD 1.				autophagy|protein transport	cytoplasm	protein binding				0			BRCA - Breast invasive adenocarcinoma(5;2.73e-06)			CCAACAGCAGCCTCCTGGCCA	0.627		NaN											1	0	1.39924e-13	0.01441	1.57863e-13	39	84									
RFX4	5992	broad.mit.edu	37	12	107155161	107155161	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr12:107155161C>T	uc001tlr.2	+	18	2188	c.2122C>T	c.(2122-2124)CGC>TGC	p.R708C	RFX4_uc001tlt.2_Missense_Mutation_p.R717C|RFX4_uc001tlv.2_Missense_Mutation_p.R614C	NM_213594	NP_998759	Q33E94	RFX4_HUMAN	regulatory factor X4 isoform c	708					transcription, DNA-dependent	nucleus	DNA binding			upper_aerodigestive_tract(1)	1						TCTGACAACGCGCAGGAATTC	0.512		NaN											0	0	0	0.003163	0	16	81									
ZNF10	7556	broad.mit.edu	37	12	133732511	133732511	+	Nonsense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr12:133732511C>T	uc009zzb.2	+	5	1126	c.679C>T	c.(679-681)CAG>TAG	p.Q227*	ZNF268_uc010tbv.1_Intron|ZNF10_uc001ulq.2_Nonsense_Mutation_p.Q227*	NM_015394	NP_056209	P21506	ZNF10_HUMAN	zinc finger protein 10	227	C2H2-type 1; atypical.			Missing (in Ref. 1).	regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|protein binding|zinc ion binding			breast(1)|central_nervous_system(1)|skin(1)	3	all_neural(191;0.0982)|Medulloblastoma(191;0.163)	all_cancers(7;1.28e-06)|all_epithelial(31;0.0051)|Lung NSC(355;0.00948)		OV - Ovarian serous cystadenocarcinoma(86;3.58e-08)|Epithelial(86;6.6e-07)|all cancers(50;2.28e-05)		TCACCTTATTCAGTTTGCAAG	0.358		NaN											0	0	0	0.00245	0	13	73									
UPF3A	65110	broad.mit.edu	37	13	115047559	115047559	+	Silent	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr13:115047559C>T	uc001vup.2	+	2	308	c.271C>T	c.(271-273)CTG>TTG	p.L91L	UPF3A_uc010tkn.1_Silent_p.L91L|UPF3A_uc001vuq.2_Silent_p.L91L|UPF3A_uc001vus.2_RNA|UPF3A_uc001vur.2_RNA	NM_023011	NP_075387	Q9H1J1	REN3A_HUMAN	UPF3 regulator of nonsense transcripts homolog A	91	Required for interaction with UPF2.				mRNA transport|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay|positive regulation of translation	cytoplasm|nucleus|plasma membrane	nucleocytoplasmic transporter activity|nucleotide binding|protein binding|RNA binding			skin(1)	1	Lung NSC(43;0.00299)|all_neural(89;0.0337)|Medulloblastoma(90;0.163)|Lung SC(71;0.218)	all_cancers(25;0.0191)|all_epithelial(44;0.00716)|all_lung(25;0.0173)|Lung NSC(25;0.0634)|Breast(118;0.238)	BRCA - Breast invasive adenocarcinoma(86;0.0886)	OV - Ovarian serous cystadenocarcinoma(48;0.195)|Epithelial(10;0.2)		GCTGCGCCCGCTGCCAGCACA	0.731		NaN											0	0	0	0.009096	0	4	16									
HSD11B2	3291	broad.mit.edu	37	16	67470804	67470804	+	Silent	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr16:67470804G>A	uc002etd.2	+	5	1232	c.1116G>A	c.(1114-1116)CTG>CTA	p.L372L		NM_000196	NP_000187	P80365	DHI2_HUMAN	hydroxysteroid (11-beta) dehydrogenase 2	372					glucocorticoid biosynthetic process	endoplasmic reticulum|microsome					0		Ovarian(137;0.0563)		OV - Ovarian serous cystadenocarcinoma(108;0.0401)|Epithelial(162;0.0891)	NADH(DB00157)	GTCACTGTCTGCCTCGAGCAC	0.662		NaN											0	0	0	0.01441	0	49	134									
KLHDC4	54758	broad.mit.edu	37	16	87743024	87743024	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr16:87743024G>A	uc002fki.2	-	10	1340	c.1294C>T	c.(1294-1296)CGC>TGC	p.R432C	KLHDC4_uc002fkh.1_RNA|KLHDC4_uc010cht.1_Intron|KLHDC4_uc002fkj.2_Missense_Mutation_p.R401C|KLHDC4_uc002fkk.2_Missense_Mutation_p.R251C|KLHDC4_uc002fkl.2_Missense_Mutation_p.R375C|KLHDC4_uc010chu.1_Missense_Mutation_p.R251C	NM_017566	NP_060036	Q8TBB5	KLDC4_HUMAN	kelch domain containing 4	432										pancreas(2)	2				BRCA - Breast invasive adenocarcinoma(80;0.0283)		GCGTTGGAGCGTGGACACGGC	0.682		NaN											0	0	0	0.01441	0	42	137									
KDM6B	23135	broad.mit.edu	37	17	7751016	7751016	+	Silent	SNP	A	A	C			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr17:7751016A>C	uc002giw.1	+	11	1786	c.1410A>C	c.(1408-1410)CCA>CCC	p.P470P	KDM6B_uc002gix.2_5'UTR	NM_001080424	NP_001073893	O15054	KDM6B_HUMAN	lysine (K)-specific demethylase 6B	470	Pro-rich.				inflammatory response	nucleus	metal ion binding|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen			central_nervous_system(1)|pancreas(1)	2						caccccctccacccccctgtc	0.333		NaN											0	0	0	0.008291	0	6	11									
AXIN2	8313	broad.mit.edu	37	17	63532493	63532493	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr17:63532493G>A	uc002jfi.2	-	8	2375	c.2086C>T	c.(2086-2088)CAG>TAG	p.Q696*	AXIN2_uc002jfh.2_Nonsense_Mutation_p.Q631*	NM_004655	NP_004646	Q9Y2T1	AXIN2_HUMAN	axin 2	696				Q -> H (in Ref. 2; AAF22799).	cellular protein localization|cellular response to organic cyclic compound|dorsal/ventral axis specification|intramembranous ossification|maintenance of DNA repeat elements|mRNA stabilization|negative regulation of canonical Wnt receptor signaling pathway|negative regulation of catenin import into nucleus|negative regulation of cell proliferation|negative regulation of osteoblast differentiation|odontogenesis|positive regulation of cell death|positive regulation of epithelial to mesenchymal transition|positive regulation of protein phosphorylation|regulation of centromeric sister chromatid cohesion|regulation of mismatch repair|Wnt receptor signaling pathway involved in somitogenesis	Axin-APC-beta-catenin-GSK3B complex|cell cortex|centrosome|cytoplasmic membrane-bounded vesicle|cytoplasmic microtubule|nucleus|plasma membrane|postsynaptic density	armadillo repeat domain binding|beta-catenin binding|GTPase activator activity|protein kinase binding|signal transducer activity|ubiquitin protein ligase binding			central_nervous_system(1)|skin(1)	2						TCCTCCAGCTGAGCCAGCGTG	0.667		NaN							Oligodontia_Ectodermal_Dysplasia_and_Colorectal_Polyp_syndrome				0	0	0	0.000602	0	5	73									
KRI1	65095	broad.mit.edu	37	19	10664773	10664773	+	Missense_Mutation	SNP	G	G	A	rs147727983		TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr19:10664773G>A	uc002moy.1	-	19	1993	c.1984C>T	c.(1984-1986)CGG>TGG	p.R662W	KRI1_uc002mow.1_Missense_Mutation_p.R281W|KRI1_uc002mox.1_Missense_Mutation_p.R658W	NM_023008	NP_075384	Q8N9T8	KRI1_HUMAN	KRI1 homolog	662										ovary(1)	1			Epithelial(33;9.2e-06)|all cancers(31;3.9e-05)			CCCAGCAGCCGTGCCTTCTTG	0.642		NaN											0	0	0	0.01441	0	49	183									
GATAD2A	54815	broad.mit.edu	37	19	19606680	19606680	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr19:19606680G>A	uc010xqt.1	+	6	1054	c.742G>A	c.(742-744)GTC>ATC	p.V248I	GATAD2A_uc010xqu.1_Intron|GATAD2A_uc010xqv.1_Missense_Mutation_p.V267I|GATAD2A_uc010xqw.1_Missense_Mutation_p.V75I	NM_017660	NP_060130	Q86YP4	P66A_HUMAN	GATA zinc finger domain containing 2A	248					DNA methylation|negative regulation of transcription, DNA-dependent	nuclear speck|NuRD complex	protein binding, bridging|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding				0						GCCCCCACTCGTCAGGGGGGC	0.672		NaN											0	0	0	0.012319	0	17	56									
FCGBP	8857	broad.mit.edu	37	19	40367841	40367841	+	Silent	SNP	T	T	G			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr19:40367841T>G	uc002omp.3	-	29	13127	c.13119A>C	c.(13117-13119)GCA>GCC	p.A4373A		NM_003890	NP_003881	Q9Y6R7	FCGBP_HUMAN	Fc fragment of IgG binding protein precursor	4373	TIL 10.					extracellular region	protein binding			ovary(4)|skin(4)|central_nervous_system(1)	9	all_cancers(60;6.03e-06)|all_lung(34;5.58e-08)|Lung NSC(34;6.62e-08)|Ovarian(47;0.06)		Epithelial(26;6.25e-23)|all cancers(26;1.13e-20)			TCGTAAGGGGTGCAGGGGACG	0.627		NaN											0	0	0	0.009535	0	14	41									
CDCA7	83879	broad.mit.edu	37	2	174223511	174223511	+	Silent	SNP	G	G	A	rs142079460		TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr2:174223511G>A	uc002uid.1	+	2	224	c.93G>A	c.(91-93)TCG>TCA	p.S31S	CDCA7_uc002uic.1_Silent_p.S31S|CDCA7_uc010zej.1_Silent_p.S31S|CDCA7_uc010zek.1_Intron	NM_145810	NP_665809	Q9BWT1	CDCA7_HUMAN	cell division cycle associated 7 isoform 2	31					regulation of cell proliferation|regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus				ovary(1)	1			OV - Ovarian serous cystadenocarcinoma(117;0.116)			TGGAAACCTCGTCATCCTCTG	0.383		NaN											0	0	0	0.012319	0	16	24									
ZMYND8	23613	broad.mit.edu	37	20	45853033	45853033	+	Missense_Mutation	SNP	A	A	G			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr20:45853033A>G	uc002xta.1	-	19	3387	c.3133T>C	c.(3133-3135)TAC>CAC	p.Y1045H	ZMYND8_uc010ghq.1_Missense_Mutation_p.Y676H|ZMYND8_uc010ghr.1_Missense_Mutation_p.Y947H|ZMYND8_uc002xst.1_Missense_Mutation_p.Y927H|ZMYND8_uc002xsu.1_Missense_Mutation_p.Y918H|ZMYND8_uc002xsv.1_Missense_Mutation_p.Y973H|ZMYND8_uc002xsw.1_Missense_Mutation_p.Y751H|ZMYND8_uc002xsx.1_Missense_Mutation_p.Y751H|ZMYND8_uc002xsy.1_Missense_Mutation_p.Y974H|ZMYND8_uc002xsz.1_Missense_Mutation_p.Y936H|ZMYND8_uc010zxy.1_Missense_Mutation_p.Y1072H|ZMYND8_uc002xtb.1_Missense_Mutation_p.Y1019H|ZMYND8_uc002xss.2_Missense_Mutation_p.Y1045H|ZMYND8_uc010zxz.1_Missense_Mutation_p.Y913H|ZMYND8_uc002xtc.1_Missense_Mutation_p.Y1019H|ZMYND8_uc002xtd.1_Missense_Mutation_p.Y994H|ZMYND8_uc002xte.1_Missense_Mutation_p.Y999H|ZMYND8_uc010zya.1_Missense_Mutation_p.Y1045H|ZMYND8_uc002xtf.1_Missense_Mutation_p.Y1065H|ZMYND8_uc002xsr.1_Missense_Mutation_p.Y144H	NM_012408	NP_036540	Q9ULU4	PKCB1_HUMAN	zinc finger, MYND-type containing 8 isoform b	1045	MYND-type.						protein binding|zinc ion binding			central_nervous_system(2)|urinary_tract(1)|ovary(1)|skin(1)	5			Epithelial(1;0.0289)|all cancers(1;0.0962)|OV - Ovarian serous cystadenocarcinoma(1;0.154)			TAGTCACAGTAGCTAGTGTTC	0.587		NaN											0	0	0	0.01441	0	50	202									
DIDO1	11083	broad.mit.edu	37	20	61525841	61525841	+	Silent	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr20:61525841G>A	uc002ydr.1	-	11	2760	c.2496C>T	c.(2494-2496)GTC>GTT	p.V832V	DIDO1_uc002yds.1_Silent_p.V832V|DIDO1_uc002ydt.1_Silent_p.V832V|DIDO1_uc002ydu.1_Silent_p.V832V	NM_033081	NP_149072	Q9BTC0	DIDO1_HUMAN	death inducer-obliterator 1 isoform c	832					apoptosis|transcription, DNA-dependent	cytoplasm|nucleus	zinc ion binding			ovary(3)|skin(3)	6	Breast(26;5.68e-08)					TGCTGCTGAAGACGTCGAGAA	0.498		NaN											0	0	0	0.012319	0	18	69									
OPRL1	4987	broad.mit.edu	37	20	62730140	62730140	+	Silent	SNP	G	G	A	rs138878509		TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr20:62730140G>A	uc002yic.2	+	5	1503	c.1101G>A	c.(1099-1101)CCG>CCA	p.P367P	OPRL1_uc002yid.2_Silent_p.P367P|OPRL1_uc002yif.3_Silent_p.P362P	NM_182647	NP_872588	P41146	OPRX_HUMAN	opiate receptor-like 1	367	Cytoplasmic (Potential).				elevation of cytosolic calcium ion concentration|inhibition of adenylate cyclase activity by G-protein signaling pathway|sensory perception	integral to plasma membrane	protein binding|X-opioid receptor activity			central_nervous_system(1)|skin(1)	2	all_cancers(38;4.74e-11)|all_epithelial(29;1.33e-12)|Lung NSC(23;3.27e-09)|all_lung(23;1.02e-08)					AGACGGTACCGCGGCCCGCAT	0.657		NaN											0	0	0	0.00499	0	15	76									
SMTN	6525	broad.mit.edu	37	22	31500334	31500334	+	Missense_Mutation	SNP	T	T	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr22:31500334T>A	uc003ajl.1	+	20	2854	c.2636T>A	c.(2635-2637)GTG>GAG	p.V879E	SMTN_uc003ajk.1_3'UTR|SMTN_uc003ajm.1_Missense_Mutation_p.V902E|SMTN_uc011ale.1_Missense_Mutation_p.V964E|SMTN_uc011alf.1_3'UTR|SMTN_uc003ajn.1_3'UTR|SMTN_uc011alg.1_3'UTR|SMTN_uc003ajo.1_3'UTR|SMTN_uc010gwe.1_3'UTR|SMTN_uc003ajp.1_RNA	NM_006932	NP_008863	P53814	SMTN_HUMAN	smoothelin isoform c	879	CH.				muscle organ development|smooth muscle contraction	actin cytoskeleton|cytoplasm	actin binding|structural constituent of muscle			large_intestine(2)|pancreas(1)	3						CTGGTGGAGGTGGACGACATG	0.632		NaN											0	0	0	0.01441	0	40	170									
SLC5A1	6523	broad.mit.edu	37	22	32498214	32498214	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr22:32498214C>T	uc003amc.2	+	13	1887	c.1655C>T	c.(1654-1656)CCG>CTG	p.P552L	SLC5A1_uc011alz.1_Missense_Mutation_p.P425L	NM_000343	NP_000334	P13866	SC5A1_HUMAN	solute carrier family 5 (sodium/glucose	552	Cytoplasmic (Potential).				carbohydrate metabolic process	integral to plasma membrane	glucose:sodium symporter activity|protein binding			skin(1)	1						AAACCCATTCCGGATGTGCAT	0.378		NaN											0	0	0	0.004007	0	15	165									
SEMA5B	54437	broad.mit.edu	37	3	122642517	122642517	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr3:122642517C>T	uc003efz.1	-	10	1523	c.1219G>A	c.(1219-1221)GAG>AAG	p.E407K	SEMA5B_uc011bju.1_Missense_Mutation_p.E349K|SEMA5B_uc003ega.1_RNA|SEMA5B_uc003egb.1_Missense_Mutation_p.E407K|SEMA5B_uc010hro.1_Missense_Mutation_p.E349K|SEMA5B_uc010hrp.1_RNA	NM_001031702	NP_001026872	Q9P283	SEM5B_HUMAN	semaphorin 5B isoform 1	407	Extracellular (Potential).|Sema.				cell differentiation|nervous system development	integral to membrane	receptor activity			ovary(2)|breast(2)|pancreas(2)|central_nervous_system(1)	7				GBM - Glioblastoma multiforme(114;0.0367)		CTGGGGTTCTCCTGGTAGCGA	0.557		NaN											0	0	0	0.01441	0	57	146									
MUC4	4585	broad.mit.edu	37	3	195505772	195505772	+	Missense_Mutation	SNP	C	C	G			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr3:195505772C>G	uc011bto.1	-	3	12755	c.12295G>C	c.(12295-12297)GTC>CTC	p.V4099L	MUC4_uc003fva.2_5'Flank|MUC4_uc003fvb.2_5'Flank|MUC4_uc003fvc.2_5'Flank|MUC4_uc003fvd.2_5'Flank|MUC4_uc003fve.2_5'Flank|MUC4_uc010hzr.2_5'Flank|MUC4_uc011btf.1_Intron|MUC4_uc011btg.1_Intron|MUC4_uc011bth.1_Intron|MUC4_uc011bti.1_Intron|MUC4_uc011btj.1_Intron|MUC4_uc011btk.1_Intron|MUC4_uc011btl.1_Intron|MUC4_uc011btm.1_Intron|MUC4_uc011btn.1_Intron|MUC4_uc003fvo.2_Intron|MUC4_uc003fvp.2_Intron|MUC4_uc010hzu.1_Intron	NM_018406	NP_060876	Q99102	MUC4_HUMAN	mucin 4 isoform a	984	Ser-rich.				cell-matrix adhesion	integral to plasma membrane|proteinaceous extracellular matrix	ErbB-2 class receptor binding|extracellular matrix constituent, lubricant activity				0	all_cancers(143;1.11e-08)|Ovarian(172;0.0634)|Breast(254;0.206)	Lung NSC(153;0.191)	Epithelial(36;3.72e-24)|all cancers(36;6.22e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.1e-18)|Lung(62;4.65e-05)|LUSC - Lung squamous cell carcinoma(58;5.31e-05)	GBM - Glioblastoma multiforme(46;2.37e-05)		AGGCTGGTGACAGGAAGAGGG	0.582		NaN											0	0	0	0.004482	0	3	35									
ZFYVE28	57732	broad.mit.edu	37	4	2341289	2341289	+	Missense_Mutation	SNP	C	C	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr4:2341289C>A	uc003gex.1	-	4	731	c.412G>T	c.(412-414)GTG>TTG	p.V138L	ZFYVE28_uc011bvk.1_Missense_Mutation_p.V68L|ZFYVE28_uc011bvl.1_Missense_Mutation_p.V138L|ZFYVE28_uc003gey.3_Missense_Mutation_p.V68L|ZFYVE28_uc003gez.2_Missense_Mutation_p.V91L|ZFYVE28_uc003gew.1_Missense_Mutation_p.V24L	NM_020972	NP_066023	Q9HCC9	LST2_HUMAN	zinc finger, FYVE domain containing 28	138					negative regulation of epidermal growth factor receptor activity	cytosol|early endosome membrane	metal ion binding|phosphatidylinositol-3-phosphate binding|protein binding			skin(2)|ovary(1)	3						GCGCCCCGCACGTCCTCCAGG	0.667		NaN											1	0	1.55795e-14	0.012319	1.80394e-14	21	9									
DEFB131	644414	broad.mit.edu	37	4	9452168	9452168	+	Silent	SNP	T	T	C			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr4:9452168T>C	uc011bwt.1	+	2	141	c.141T>C	c.(139-141)ATT>ATC	p.I47I		NM_001040448	NP_001035538	P59861	DB131_HUMAN	defensin, beta 131 precursor	47					defense response to bacterium	extracellular region					0						AACATGCAATTAGATACTGTG	0.373		NaN											0	0	0	0.006214	0	4	24									
CDKN1A	1026	broad.mit.edu	37	6	36652024	36652024	+	Nonsense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08			G	A	G	G		Valid	Somatic	Phase_I	WXS	Fluidigm;RNASeq;WGS			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr6:36652024G>A	uc003omm.3	+	2	268	c.146G>A	c.(145-147)TGG>TAG	p.W49*	CDKN1A_uc011dtq.1_Nonsense_Mutation_p.W83*|CDKN1A_uc003oml.2_Nonsense_Mutation_p.W49*|CDKN1A_uc003omn.2_Nonsense_Mutation_p.W49*	NM_000389	NP_000380	P38936	CDN1A_HUMAN	cyclin-dependent kinase inhibitor 1A	49					cell cycle arrest|cellular response to extracellular stimulus|cellular response to ionizing radiation|DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest|G1 phase of mitotic cell cycle|G1/S transition of mitotic cell cycle|G2/M transition of mitotic cell cycle|induction of apoptosis by intracellular signals|negative regulation of cell growth|negative regulation of cell proliferation|positive regulation of fibroblast proliferation|positive regulation of reactive oxygen species metabolic process|Ras protein signal transduction|S phase of mitotic cell cycle|stress-induced premature senescence	cyclin-dependent protein kinase holoenzyme complex|cytosol|nucleoplasm|PCNA-p21 complex	cyclin-dependent protein kinase activating kinase activity|cyclin-dependent protein kinase inhibitor activity|metal ion binding			ovary(1)|breast(1)	2						CGTGAGCGATGGAACTTCGAC	0.667		NaN							Multiple_Endocrine_Neoplasia_type_1				0	0	0	0.01441	0	82	12									
MDGA1	266727	broad.mit.edu	37	6	37605212	37605212	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr6:37605212C>T	uc003onu.1	-	17	3979	c.2800G>A	c.(2800-2802)GCC>ACC	p.A934T	MDGA1_uc003onv.1_3'UTR	NM_153487	NP_705691	Q8NFP4	MDGA1_HUMAN	MAM domain containing	934					brain development|neuron migration|spinal cord association neuron differentiation	anchored to plasma membrane				central_nervous_system(2)	2						TGGCAGGGGGCTCCACTGCCC	0.652		NaN											0	0	0	0.009535	0	27	65									
MLL3	58508	broad.mit.edu	37	7	151962205	151962205	+	Missense_Mutation	SNP	C	C	G			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08			C	G	C	C		Valid	Somatic	Phase_I	WXS	Fluidigm			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr7:151962205C>G	uc003wla.2	-	8	1321	c.1102G>C	c.(1102-1104)GGA>CGA	p.G368R		NM_170606	NP_733751	Q8NEZ4	MLL3_HUMAN	myeloid/lymphoid or mixed-lineage leukemia 3	368	PHD-type 1.|RING-type.				intracellular signal transduction|regulation of transcription, DNA-dependent|transcription, DNA-dependent		DNA binding|protein binding|zinc ion binding			large_intestine(27)|pancreas(13)|ovary(9)|central_nervous_system(8)|breast(3)|upper_aerodigestive_tract(1)|urinary_tract(1)|skin(1)	63	all_neural(206;0.187)	all_hematologic(28;0.0592)|Prostate(32;0.0906)	OV - Ovarian serous cystadenocarcinoma(82;0.00715)	UCEC - Uterine corpus endometrioid carcinoma (81;0.0597)|BRCA - Breast invasive adenocarcinoma(188;0.0462)		AGGCACATTCCATGATAGTGC	0.443		NaN	N		medulloblastoma								0	0	0	0.008361	0	25	597									
DCAF12	25853	broad.mit.edu	37	9	34107398	34107398	+	Missense_Mutation	SNP	T	T	C			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr9:34107398T>C	uc003ztt.2	-	3	841	c.499A>G	c.(499-501)ATC>GTC	p.I167V		NM_015397	NP_056212	Q5T6F0	DCA12_HUMAN	DDB1 and CUL4 associated factor 12	167	WD 1.					centrosome|CUL4 RING ubiquitin ligase complex					0						AGTCGATAGATGGCAAGACTG	0.507		NaN											0	0	0	0.01441	0	48	55									
XG	7499	broad.mit.edu	37	X	2729397	2729397	+	Missense_Mutation	SNP	G	G	A			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chrX:2729397G>A	uc011mhg.1	+	9	653	c.430G>A	c.(430-432)GTG>ATG	p.V144M	XG_uc004cqp.2_Missense_Mutation_p.V159M	NM_175569	NP_780778	P55808	XG_HUMAN	XG glycoprotein isoform 1 precursor	144	Helical; (Potential).					integral to membrane|plasma membrane				ovary(1)	1		all_cancers(21;9e-05)|all_epithelial(21;6.22e-06)|all_lung(23;0.000597)|Lung NSC(23;0.00901)|Lung SC(21;0.186)				AGCAAAAATCGTGTCTCCCAT	0.418		NaN											0	0	0	0.00333	0	18	18									
FAM47C	442444	broad.mit.edu	37	X	37028026	37028026	+	Missense_Mutation	SNP	T	T	C	rs141294322		TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chrX:37028026T>C	uc004ddl.1	+	1	1557	c.1543T>C	c.(1543-1545)TCT>CCT	p.S515P		NM_001013736	NP_001013758	Q5HY64	FA47C_HUMAN	hypothetical protein LOC442444	515										ovary(3)	3						CCCAGAGCCTTCTGAGACTGG	0.612		NaN											0	0	0	0.009096	0	4	96									
ACRC	93953	broad.mit.edu	37	X	70823916	70823916	+	Missense_Mutation	SNP	A	A	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chrX:70823916A>T	uc004eae.2	+	8	1290	c.789A>T	c.(787-789)GAA>GAT	p.E263D	BCYRN1_uc011mpt.1_Intron	NM_052957	NP_443189	Q96QF7	ACRC_HUMAN	ACRC protein	263	Asp/Ser-rich.					nucleus				ovary(3)	3	Renal(35;0.156)					ATGATTCGGAAGCTCCCGACG	0.552		NaN											0	0	0	0.001984	0	6	96									
ACRC	93953	broad.mit.edu	37	X	70823918	70823918	+	Missense_Mutation	SNP	C	C	T			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chrX:70823918C>T	uc004eae.2	+	8	1292	c.791C>T	c.(790-792)GCT>GTT	p.A264V	BCYRN1_uc011mpt.1_Intron	NM_052957	NP_443189	Q96QF7	ACRC_HUMAN	ACRC protein	264	Asp/Ser-rich.					nucleus				ovary(3)	3	Renal(35;0.156)					GATTCGGAAGCTCCCGACGAC	0.557		NaN											0	0	0	0.001984	0	6	96									
TAF1C	9013	broad.mit.edu	37	16	84213650	84213651	+	Frame_Shift_Ins	INS	-	-	G			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr16:84213650_84213651insG	uc002fhn.2	-	13	1828_1829	c.1600_1601insC	c.(1600-1602)CAGfs	p.Q534fs	TAF1C_uc002fhm.2_Frame_Shift_Ins_p.Q440fs|TAF1C_uc010vnx.1_Frame_Shift_Ins_p.Q508fs|TAF1C_uc010vny.1_Frame_Shift_Ins_p.Q125fs|TAF1C_uc010vnz.1_Frame_Shift_Ins_p.Q202fs|TAF1C_uc002fho.2_Frame_Shift_Ins_p.Q57fs|TAF1C_uc010voa.1_Frame_Shift_Ins_p.Q202fs|TAF1C_uc002fhp.1_Intron	NM_005679	NP_005670	Q15572	TAF1C_HUMAN	TBP-associated factor 1C isoform 1	534					regulation of transcription, DNA-dependent|termination of RNA polymerase I transcription|transcription elongation from RNA polymerase I promoter|transcription from RNA polymerase II promoter|transcription initiation from RNA polymerase I promoter	nucleoplasm	DNA binding			ovary(1)	1						AGGAAGAGACTGGGGGGGGCCT	0.663		NaN											NaN	NaN	NaN	NaN	NaN	7	87	---	---							
MYOCD	93649	broad.mit.edu	37	17	12647692	12647694	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr17:12647692_12647694delCAG	uc002gnn.2	+	8	1209_1211	c.910_912delCAG	c.(910-912)CAGdel	p.Q310del	MYOCD_uc002gno.2_In_Frame_Del_p.Q310del|MYOCD_uc002gnp.1_In_Frame_Del_p.Q214del|MYOCD_uc002gnq.2_In_Frame_Del_p.Q29del	NM_153604	NP_705832	Q8IZQ8	MYCD_HUMAN	myocardin isoform 2	310	Gln-rich.				cardiac muscle cell differentiation|negative regulation of cell proliferation|negative regulation of cyclin-dependent protein kinase activity|positive regulation of smooth muscle cell differentiation|positive regulation of smooth muscle contraction|positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation|regulation of histone acetylation|smooth muscle cell differentiation	nucleus	nucleic acid binding|RNA polymerase II transcription factor binding transcription factor activity|transcription factor binding			central_nervous_system(2)|skin(2)|ovary(1)	5				UCEC - Uterine corpus endometrioid carcinoma (92;0.0969)		AATCCTCAGCcagcagcagcagc	0.527		NaN											NaN	NaN	NaN	NaN	NaN	7	78	---	---							
ACPT	93650	broad.mit.edu	37	19	51298106	51298106	+	Frame_Shift_Del	DEL	C	C	-			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr19:51298106delC	uc002pta.1	+	10	1050	c.1050delC	c.(1048-1050)CTCfs	p.L350fs		NM_033068	NP_149059	Q9BZG2	PPAT_HUMAN	testicular acid phosphatase precursor	350	Extracellular (Potential).					integral to membrane	acid phosphatase activity				0		all_neural(266;0.057)		OV - Ovarian serous cystadenocarcinoma(262;0.00641)|GBM - Glioblastoma multiforme(134;0.028)		CTCTCAGCCTCCCCGGGTGCC	0.682		NaN											NaN	NaN	NaN	NaN	NaN	7	828	---	---							
ADAMTS2	9509	broad.mit.edu	37	5	178772259	178772260	+	In_Frame_Ins	INS	-	-	GCA			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chr5:178772259_178772260insGCA	uc003mjw.2	-	1	70_71	c.70_71insTGC	c.(70-72)CCG>CTGCCG	p.23_24insL	ADAMTS2_uc011dgm.1_In_Frame_Ins_p.23_24insL	NM_014244	NP_055059	O95450	ATS2_HUMAN	ADAM metallopeptidase with thrombospondin type 1	23_24					collagen catabolic process	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding			large_intestine(1)|lung(1)|ovary(1)|pancreas(1)	4	all_cancers(89;0.000456)|all_epithelial(37;0.000138)|Renal(175;0.000159)|Lung NSC(126;0.00184)|all_lung(126;0.00326)	all_cancers(40;0.00604)|all_neural(177;0.00411)|Medulloblastoma(196;0.00508)|Lung NSC(249;0.0569)|all_lung(500;0.129)|all_hematologic(541;0.211)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)	GBM - Glioblastoma multiforme(465;0.0473)		gagcggcggcggcagcagcagc	0.584		NaN											NaN	NaN	NaN	NaN	NaN	7	12	---	---							
MAGEC1	9947	broad.mit.edu	37	X	140994844	140994846	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-CF-A3MF-01A-12D-A21A-08	TCGA-CF-A3MF-10A-01D-A21A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c66c92d5-df65-46e6-861d-d8a98808e6a3	d6e91f4c-38c0-4393-9cb7-be076663dff3	g.chrX:140994844_140994846delCCT	uc004fbt.2	+	4	1940_1942	c.1654_1656delCCT	c.(1654-1656)CCTdel	p.P553del	MAGEC1_uc010nsl.1_Intron	NM_005462	NP_005453	O60732	MAGC1_HUMAN	melanoma antigen family C, 1	553							protein binding			ovary(1)|kidney(1)|central_nervous_system(1)|skin(1)	4	Acute lymphoblastic leukemia(192;6.56e-05)					TCCTCAGAGCCCTCCTCAGGGGG	0.567		NaN								HNSCC(15;0.026)			NaN	NaN	NaN	NaN	NaN	9	442	---	---							
