Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	ACHILLES_Top_Genes	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
MST1P9	11223	broad.mit.edu	37	1	17084269	17084269	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:17084269G>A	uc010ock.1	-	13	1748	c.1748C>T	c.(1747-1749)GCA>GTA	p.A583V	CROCC_uc009voy.1_Intron|MST1P9_uc001azp.3_Missense_Mutation_p.A183V	NR_002729				SubName: Full=Hepatocyte growth factor-like protein homolog;												0						ACCCCAGCCTGCAATCTCACA	0.582			NA											7	700					0	0	0.001984	0	0
SLC6A9	6536	broad.mit.edu	37	1	44474144	44474144	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:44474144G>A	uc001cll.2	-	5	882	c.690C>T	c.(688-690)GCC>GCT	p.A230A	SLC6A9_uc009vxe.2_Silent_p.A86A|SLC6A9_uc010okm.1_Silent_p.A157A|SLC6A9_uc001clm.2_Silent_p.A176A|SLC6A9_uc009vxd.2_RNA|SLC6A9_uc010okn.1_Silent_p.A161A|SLC6A9_uc001cln.2_Silent_p.A157A|SLC6A9_uc010oko.1_Silent_p.A46A|SLC6A9_uc010okp.1_RNA	NM_201649	NP_964012	P48067	SC6A9_HUMAN	solute carrier family 6 member 9 isoform 2	230	Extracellular (Potential).					integral to plasma membrane|membrane fraction	glycine:sodium symporter activity|neurotransmitter:sodium symporter activity				0	Acute lymphoblastic leukemia(166;0.155)	Myeloproliferative disorder(586;0.0511)			Glycine(DB00145)	CCAGTACACCGGCGCAGTCAT	0.607			NA											21	170					0	0	0.002299	0	0
FAM5C	339479	broad.mit.edu	37	1	190067976	190067976	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:190067976G>A	uc001gse.1	-	8	1705	c.1473C>T	c.(1471-1473)GAC>GAT	p.D491D	FAM5C_uc010pot.1_Silent_p.D389D	NM_199051	NP_950252	Q76B58	FAM5C_HUMAN	family with sequence similarity 5, member C	491						extracellular region				lung(2)|ovary(1)|kidney(1)|skin(1)	5	Prostate(682;0.198)					GATCTTGCAGGTCAGTTTCAA	0.517			NA											33	316					0	0	0.002836	0	0
FAM58B	339521	broad.mit.edu	37	1	200182895	200182895	+	Silent	SNP	G	G	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:200182895G>T	uc009wzi.1	+	1	240	c.204G>T	c.(202-204)CTG>CTT	p.L68L		NM_001105517	NP_001098987	P0C7Q3	FA58B_HUMAN	family with sequence similarity 58 member B	68					regulation of cyclin-dependent protein kinase activity|regulation of transcription, DNA-dependent		protein kinase binding				0	Prostate(682;0.19)					AGACCATCCTGGACGCCTTTG	0.527			NA											12	305					0.000978159	0.00119412	0.000978	1	0
C1orf106	55765	broad.mit.edu	37	1	200868613	200868613	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:200868613C>T	uc001gvo.2	+	3	353	c.323C>T	c.(322-324)CCG>CTG	p.P108L	C1orf106_uc010ppm.1_Missense_Mutation_p.P23L	NM_018265	NP_060735	Q3KP66	CA106_HUMAN	hypothetical protein LOC55765 isoform 1	108										skin(2)|ovary(1)	3						CCCGACAGCCCGGTCTCCCCA	0.612			NA											17	99					0	0	0.006122	0	0
DUSP10	11221	broad.mit.edu	37	1	221875902	221875902	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:221875902G>A	uc001hmy.1	-	4	1483	c.1301C>T	c.(1300-1302)GCT>GTT	p.A434V	DUSP10_uc001hmx.1_Missense_Mutation_p.A92V|DUSP10_uc001hmz.1_Missense_Mutation_p.A92V	NM_007207	NP_009138	Q9Y6W6	DUS10_HUMAN	dual specificity phosphatase 10 isoform a	434	Tyrosine-protein phosphatase.				inactivation of MAPK activity|JNK cascade|negative regulation of JNK cascade|negative regulation of JUN kinase activity|negative regulation of stress-activated MAPK cascade	Golgi apparatus|nucleus	MAP kinase tyrosine/serine/threonine phosphatase activity|protein tyrosine phosphatase activity			upper_aerodigestive_tract(1)|lung(1)	2				GBM - Glioblastoma multiforme(131;0.0103)		AAATTTATAAGCATCAGTCAT	0.507			NA											16	149					0	0	0.004007	0	0
OR6F1	343169	broad.mit.edu	37	1	247875225	247875225	+	Missense_Mutation	SNP	T	T	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr1:247875225T>A	uc001idj.1	-	1	833	c.833A>T	c.(832-834)AAC>ATC	p.N278I		NM_001005286	NP_001005286	Q8NGZ6	OR6F1_HUMAN	olfactory receptor, family 6, subfamily F,	278	Helical; Name=7; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity				0	all_cancers(71;3.24e-05)|all_epithelial(71;1.3e-05)|Breast(184;0.0149)|Ovarian(71;0.0377)|all_lung(81;0.0662)|Lung NSC(105;0.0724)		OV - Ovarian serous cystadenocarcinoma(106;0.0168)			CACCACAGTGTTCAGGACGTG	0.458			NA											31	162					0	0	0.002445	0	0
LARP4B	23185	broad.mit.edu	37	10	876909	876909	+	Missense_Mutation	SNP	T	T	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr10:876909T>G	uc001ifs.1	-	8	800	c.759A>C	c.(757-759)GAA>GAC	p.E253D		NM_015155	NP_055970	Q92615	LAR4B_HUMAN	La ribonucleoprotein domain family, member 4B	253	RRM.						nucleotide binding|RNA binding			ovary(2)|central_nervous_system(1)	3						TAAATAGTGCTTCTACTTCCT	0.284			NA											3	37					0	0	0.004672	0	0
ZNF408	79797	broad.mit.edu	37	11	46726804	46726804	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr11:46726804C>T	uc001nde.1	+	5	1784	c.1554C>T	c.(1552-1554)CAC>CAT	p.H518H	ZNF408_uc010rgw.1_Silent_p.H510H	NM_024741	NP_079017	Q9H9D4	ZN408_HUMAN	zinc finger protein 408	518	C2H2-type 6.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|identical protein binding|zinc ion binding				0						TGCGGCTCCACACCGGGGAGC	0.642	Pancreas(79;698 1390 6545 18745 34127)|Esophageal Squamous(120;1014 1625 12837 24601 49525)		NA											14	131					0	0	0.003163	0	0
AHNAK	79026	broad.mit.edu	37	11	62289394	62289394	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr11:62289394G>A	uc001ntl.2	-	5	12795	c.12495C>T	c.(12493-12495)ATC>ATT	p.I4165I	AHNAK_uc001ntk.1_Intron	NM_001620	NP_001611	Q09666	AHNK_HUMAN	AHNAK nucleoprotein isoform 1	4165					nervous system development	nucleus	protein binding			ovary(10)|pancreas(4)|skin(4)|upper_aerodigestive_tract(1)	19		Melanoma(852;0.155)				TGGGGCCCTTGATGTCAACTT	0.512			NA											42	287					0	0	0.006999	0	0
TECTA	7007	broad.mit.edu	37	11	120996044	120996044	+	Missense_Mutation	SNP	T	T	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr11:120996044T>G	uc010rzo.1	+	7	1237	c.1237T>G	c.(1237-1239)TTA>GTA	p.L413V		NM_005422	NP_005413	O75443	TECTA_HUMAN	tectorin alpha precursor	413	VWFD 1.				cell-matrix adhesion|sensory perception of sound	anchored to membrane|plasma membrane|proteinaceous extracellular matrix				breast(6)|ovary(2)|skin(2)	10	all_hematologic(175;0.208)	Breast(109;0.000766)|Medulloblastoma(222;0.0427)|all_neural(223;0.112)		BRCA - Breast invasive adenocarcinoma(274;8.04e-06)|OV - Ovarian serous cystadenocarcinoma(223;0.166)		GCCTGTCACCTTAGACTTGGG	0.498			NA											42	355					0	0	0.00874	0	0
GRIN2B	2904	broad.mit.edu	37	12	13769453	13769453	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr12:13769453C>T	uc001rbt.2	-	5	1443	c.1264G>A	c.(1264-1266)GTG>ATG	p.V422M		NM_000834	NP_000825	Q13224	NMDE2_HUMAN	N-methyl-D-aspartate receptor subunit 2B	422	Extracellular (Potential).				response to ethanol	cell junction|N-methyl-D-aspartate selective glutamate receptor complex|outer membrane-bounded periplasmic space|postsynaptic membrane	glycine binding|N-methyl-D-aspartate selective glutamate receptor activity|zinc ion binding			central_nervous_system(4)|ovary(3)|skin(3)|lung(2)	12					Felbamate(DB00949)|Haloperidol(DB00502)|L-Glutamic Acid(DB00142)|Loperamide(DB00836)|Memantine(DB01043)	AGAGGGTCCACACTTTCCACA	0.527			NA											5	142					0	0	0.001168	0	0
ACVR1B	91	broad.mit.edu	37	12	52377803	52377803	+	Missense_Mutation	SNP	C	C	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr12:52377803C>G	uc001rzn.2	+	5	874	c.832C>G	c.(832-834)CTG>GTG	p.L278V	ACVR1B_uc001rzl.2_Missense_Mutation_p.L278V|ACVR1B_uc001rzm.2_Missense_Mutation_p.L278V|ACVR1B_uc010snn.1_Missense_Mutation_p.L319V	NM_004302	NP_004293	P36896	ACV1B_HUMAN	activin A receptor, type IB isoform a precursor	278	Protein kinase.|Cytoplasmic (Potential).				G1/S transition of mitotic cell cycle|induction of apoptosis|negative regulation of cell growth|peptidyl-threonine phosphorylation|positive regulation of activin receptor signaling pathway|positive regulation of erythrocyte differentiation|protein autophosphorylation|transmembrane receptor protein serine/threonine kinase signaling pathway	cell surface	activin receptor activity, type I|ATP binding|metal ion binding|SMAD binding|transforming growth factor beta receptor activity|ubiquitin protein ligase binding			pancreas(4)|breast(2)|ovary(1)|lung(1)|kidney(1)	9				BRCA - Breast invasive adenocarcinoma(357;0.104)	Adenosine triphosphate(DB00171)	CTGGACACAGCTGTGGCTTGT	0.463			NA											4	37					0	0	0.00308	0	0
PTPRB	5787	broad.mit.edu	37	12	70938424	70938424	+	Missense_Mutation	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr12:70938424T>C	uc001swb.3	-	20	4783	c.4753A>G	c.(4753-4755)ACA>GCA	p.T1585A	PTPRB_uc010sto.1_Missense_Mutation_p.T1495A|PTPRB_uc010stp.1_Missense_Mutation_p.T1495A|PTPRB_uc001swc.3_Missense_Mutation_p.T1803A|PTPRB_uc001swa.3_Missense_Mutation_p.T1715A	NM_002837	NP_002828	P23467	PTPRB_HUMAN	protein tyrosine phosphatase, receptor type, B	1585	Extracellular (Potential).				angiogenesis	integral to plasma membrane	protein binding|transmembrane receptor protein tyrosine phosphatase activity			lung(2)|skin(1)	3	Renal(347;0.236)		GBM - Glioblastoma multiforme(2;2.17e-05)|Lung(24;0.000636)|OV - Ovarian serous cystadenocarcinoma(12;0.00306)|STAD - Stomach adenocarcinoma(21;0.149)			AAGAGCTGTGTAAAAGCTCGA	0.358			NA											4	29					0	0	0.000602	0	0
CEP290	80184	broad.mit.edu	37	12	88486598	88486598	+	Silent	SNP	G	G	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr12:88486598G>T	uc001tar.2	-	29	3665	c.3321C>A	c.(3319-3321)ATC>ATA	p.I1107I	CEP290_uc001taq.2_Silent_p.I167I	NM_025114	NP_079390	O15078	CE290_HUMAN	centrosomal protein 290kDa	1107	Potential.				cilium assembly|eye photoreceptor cell development|G2/M transition of mitotic cell cycle|hindbrain development|otic vesicle formation|positive regulation of transcription, DNA-dependent|pronephros development|protein transport	cell surface|centrosome|cytosol|nucleus|photoreceptor connecting cilium	protein binding	p.I1109I(1)		ovary(5)|breast(1)|pancreas(1)	7						CATCCAAATTGATTTTGGTAA	0.353			NA											18	94					1.2644e-06	1.674e-06	0.001523	1	0
FAM179B	23116	broad.mit.edu	37	14	45433195	45433195	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr14:45433195G>A	uc001wvv.2	+	1	1780	c.1571G>A	c.(1570-1572)CGC>CAC	p.R524H	FAM179B_uc001wvw.2_Missense_Mutation_p.R524H|FAM179B_uc010anc.2_RNA|KLHL28_uc001wvq.2_5'Flank|KLHL28_uc001wvr.2_5'Flank|FAM179B_uc010anb.1_Missense_Mutation_p.R524H|FAM179B_uc001wvu.2_Missense_Mutation_p.R524H	NM_015091	NP_055906	Q9Y4F4	F179B_HUMAN	hypothetical protein LOC23116	524	HEAT 4.						binding			skin(2)|upper_aerodigestive_tract(1)	3						GATAGCAAACGCAGGGTACGC	0.463			NA											5	175					0	0	0.000602	0	0
PPIB	5479	broad.mit.edu	37	15	64455120	64455120	+	Silent	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:64455120G>C	uc002and.2	-	1	235	c.66C>G	c.(64-66)GTC>GTG	p.V22V	PPIB_uc010bgx.1_Silent_p.V14V	NM_000942	NP_000933	P23284	PPIB_HUMAN	peptidylprolyl isomerase B precursor	22					protein folding	endoplasmic reticulum lumen|melanosome	peptide binding|peptidyl-prolyl cis-trans isomerase activity|unfolded protein binding				0					L-Proline(DB00172)	GCAGGAAGAAGACGGACCCCG	0.647	GBM(105;399 1481 32889 33051 36637)		NA											4	39					0	0	0.000602	0	0
LCTL	197021	broad.mit.edu	37	15	66853375	66853375	+	Missense_Mutation	SNP	C	C	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:66853375C>A	uc002aqc.2	-	6	806	c.674G>T	c.(673-675)GGC>GTC	p.G225V	LCTL_uc002aqd.3_Missense_Mutation_p.G52V|LCTL_uc010bhw.2_Intron	NM_207338	NP_997221	Q6UWM7	LCTL_HUMAN	lactase-like precursor	225	Extracellular (Potential).				carbohydrate metabolic process	endoplasmic reticulum membrane|integral to membrane	cation binding|hydrolase activity, hydrolyzing O-glycosyl compounds			ovary(2)	2						CTTGTACAGGCCGGTGCCGCG	0.602			NA											9	111					9.31168e-06	1.16706e-05	0.001855	1	0
SNX33	257364	broad.mit.edu	37	15	75949488	75949488	+	Missense_Mutation	SNP	C	C	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:75949488C>A	uc002bau.2	+	2	1753	c.1657C>A	c.(1657-1659)CAG>AAG	p.Q553K	SNX33_uc002bav.2_Missense_Mutation_p.Q166K	NM_153271	NP_695003	Q8WV41	SNX33_HUMAN	sorting nexin 33	553	BAR.				cell communication		phosphatidylinositol binding|protein binding			ovary(1)	1						CTTGCGCCAGCAGATCCTCTT	0.627			NA											9	271					6.40141e-05	7.91753e-05	0.000978	1	0
KIAA1024	23251	broad.mit.edu	37	15	79749775	79749775	+	Missense_Mutation	SNP	C	C	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:79749775C>A	uc002bew.1	+	2	1361	c.1286C>A	c.(1285-1287)GCG>GAG	p.A429E	KIAA1024_uc010unk.1_Missense_Mutation_p.A429E	NM_015206	NP_056021	Q9UPX6	K1024_HUMAN	hypothetical protein LOC23251	429						integral to membrane				pancreas(2)|ovary(1)|central_nervous_system(1)	4						ATTGCTTATGCGGCAAAACAA	0.473			NA											21	154					3.28513e-13	4.5412e-13	0.003954	1	0
KIAA1199	57214	broad.mit.edu	37	15	81235319	81235319	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:81235319G>A	uc002bfw.1	+	27	3993	c.3733G>A	c.(3733-3735)GGC>AGC	p.G1245S	KIAA1199_uc010unn.1_Missense_Mutation_p.G1245S	NM_018689	NP_061159	Q8WUJ3	K1199_HUMAN	KIAA1199 precursor	1245										upper_aerodigestive_tract(1)|ovary(1)|skin(1)	3						TTCGGAGGATGGCATCCAGGT	0.582			NA											98	687					0	0	0.00361	0	0
FSD2	123722	broad.mit.edu	37	15	83451620	83451620	+	Missense_Mutation	SNP	T	T	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:83451620T>A	uc002bjd.2	-	4	1060	c.893A>T	c.(892-894)AAC>ATC	p.N298I	FSD2_uc010uol.1_Missense_Mutation_p.N298I|FSD2_uc010uom.1_Missense_Mutation_p.N298I	NM_001007122	NP_001007123	A1L4K1	FSD2_HUMAN	fibronectin type III and SPRY domain containing	298	Potential.									central_nervous_system(1)	1						AGTATCTAGGTTTTCTCCACA	0.378			NA											7	550					0	0	0.001984	0	0
ACAN	176	broad.mit.edu	37	15	89400783	89400783	+	Missense_Mutation	SNP	T	T	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr15:89400783T>A	uc010upo.1	+	12	5341	c.4967T>A	c.(4966-4968)TTC>TAC	p.F1656Y	ACAN_uc010upp.1_Missense_Mutation_p.F1656Y|ACAN_uc002bna.2_RNA	NM_013227	NP_037359	E7EX88	E7EX88_HUMAN	aggrecan isoform 2 precursor	1656					cell adhesion		hyaluronic acid binding|sugar binding			ovary(2)|central_nervous_system(1)	3	Lung NSC(78;0.0392)|all_lung(78;0.077)		BRCA - Breast invasive adenocarcinoma(143;0.146)			CCATCTGGATTCCCAACTGTT	0.532			NA											7	402					0	0	0.00308	0	0
SLC5A2	6524	broad.mit.edu	37	16	31499014	31499014	+	Silent	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr16:31499014T>C	uc002ecf.3	+	7	838	c.819T>C	c.(817-819)GAT>GAC	p.D273D	SLC5A2_uc010car.2_RNA|C16orf58_uc002ecg.2_RNA	NM_003041	NP_003032	P31639	SC5A2_HUMAN	solute carrier family 5 (sodium/glucose	273	Helical; (Potential).				carbohydrate metabolic process	integral to membrane	low-affinity glucose:sodium symporter activity			ovary(1)	1						TGACCGGGGATCTGCCGTGGC	0.672			NA											11	54					0	0	0.007413	0	0
C16orf58	64755	broad.mit.edu	37	16	31502241	31502241	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr16:31502241G>A	uc002eci.1	-	13	1334	c.1322C>T	c.(1321-1323)GCC>GTC	p.A441V	C16orf58_uc002ecg.2_5'Flank|C16orf58_uc002ech.1_Missense_Mutation_p.A179V	NM_022744	NP_073581	Q96GQ5	CP058_HUMAN	hypothetical protein LOC64755	441						integral to membrane				ovary(1)|breast(1)	2						CTTCCAGCCGGCATCCTGCAG	0.602			NA											4	123					0	0	0.000248	0	0
TRIM16	10626	broad.mit.edu	37	17	15535856	15535856	+	Missense_Mutation	SNP	A	A	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:15535856A>G	uc002gox.2	-	7	1539	c.982T>C	c.(982-984)TAT>CAT	p.Y328H	TRIM16_uc002gor.1_Missense_Mutation_p.Y328H|TRIM16_uc002gow.2_Missense_Mutation_p.Y112H|TRIM16_uc002goy.2_Missense_Mutation_p.Y198H	NM_006470	NP_006461	O95361	TRI16_HUMAN	tripartite motif-containing 16	328	Potential.				histone H3 acetylation|histone H4 acetylation|positive regulation of interleukin-1 beta secretion|positive regulation of keratinocyte differentiation|positive regulation of retinoic acid receptor signaling pathway|positive regulation of transcription, DNA-dependent|response to growth hormone stimulus|response to organophosphorus|response to retinoic acid	cytoplasm|plasma membrane|PML body	DNA binding|interleukin-1 binding|NACHT domain binding|zinc ion binding			ovary(2)|skin(1)	3				UCEC - Uterine corpus endometrioid carcinoma (92;0.0839)|Epithelial(1;8.4e-29)|all cancers(1;3.06e-28)|Colorectal(1;1.57e-19)|OV - Ovarian serous cystadenocarcinoma(1;6.1e-17)|COAD - Colon adenocarcinoma(1;3.38e-12)|READ - Rectum adenocarcinoma(2;1.46e-05)|BRCA - Breast invasive adenocarcinoma(8;0.0559)		TTTTTCTTATAGTTCTCCAGC	0.468			NA											31	188					0	0	0.003271	0	0
SHMT1	6470	broad.mit.edu	37	17	18250892	18250892	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:18250892C>T	uc002gta.2	-	5	627	c.437G>A	c.(436-438)GGG>GAG	p.G146E	SHMT1_uc002gtb.2_Missense_Mutation_p.G146E|SHMT1_uc010cqb.2_Missense_Mutation_p.G146E|SHMT1_uc010vxt.1_Missense_Mutation_p.G8E|SHMT1_uc002gtd.1_Missense_Mutation_p.G146E|SHMT1_uc010vxu.1_Missense_Mutation_p.G146E	NM_004169	NP_004160	P34896	GLYC_HUMAN	serine hydroxymethyltransferase 1 (soluble)	146					carnitine biosynthetic process|folic acid metabolic process|L-serine catabolic process|one-carbon metabolic process|purine base biosynthetic process	cytosol|nucleus	glycine hydroxymethyltransferase activity|protein homodimerization activity|pyridoxal phosphate binding			ovary(1)	1					Glycine(DB00145)|Mimosine(DB01055)|Pyridoxal Phosphate(DB00114)|Tetrahydrofolic acid(DB00116)	CAGGTGGCCCCCATCCGGAAG	0.537			NA											53	174					0	0	0.00361	0	0
STAT5A	6776	broad.mit.edu	37	17	40441527	40441527	+	Missense_Mutation	SNP	A	A	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:40441527A>T	uc002hzj.1	+	3	740	c.98A>T	c.(97-99)TAC>TTC	p.Y33F	STAT5A_uc010cya.1_Missense_Mutation_p.Y33F|STAT5A_uc010cyb.1_Missense_Mutation_p.Y33F|STAT5A_uc010cyc.1_Missense_Mutation_p.Y33F	NM_003152	NP_003143	P42229	STA5A_HUMAN	signal transducer and activator of transcription	33					2-oxoglutarate metabolic process|allantoin metabolic process|citrate metabolic process|creatine metabolic process|creatinine metabolic process|fatty acid metabolic process|isoleucine metabolic process|oxaloacetate metabolic process|succinate metabolic process|taurine metabolic process|valine metabolic process	cytosol|nucleoplasm	calcium ion binding|DNA binding|protein binding|sequence-specific DNA binding transcription factor activity			lung(1)	1		all_cancers(22;1.56e-06)|all_epithelial(22;3.17e-05)|Breast(137;0.000143)		BRCA - Breast invasive adenocarcinoma(366;0.128)		GTCCGGCACTACTTGGCCCAG	0.652			NA											14	85					0	0	0.00499	0	0
MRPL10	124995	broad.mit.edu	37	17	45901636	45901636	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:45901636G>A	uc002ilz.2	-	5	747	c.721C>T	c.(721-723)CGC>TGC	p.R241C	OSBPL7_uc002ilx.1_5'Flank|MRPL10_uc010wky.1_Missense_Mutation_p.R202C|MRPL10_uc002ily.2_Missense_Mutation_p.R251C	NM_145255	NP_660298	Q7Z7H8	RM10_HUMAN	mitochondrial ribosomal protein L10 precursor	241					ribosome biogenesis|translation	mitochondrial large ribosomal subunit	structural constituent of ribosome			ovary(1)	1						TCCTTCTCGCGTTGCTCTCTG	0.587			NA											9	115					0	0	0.004482	0	0
TTYH2	94015	broad.mit.edu	37	17	72248464	72248464	+	Missense_Mutation	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:72248464T>C	uc002jkc.2	+	11	1239	c.1208T>C	c.(1207-1209)TTC>TCC	p.F403S	TTYH2_uc010wqw.1_Missense_Mutation_p.F382S|TTYH2_uc002jkd.2_Missense_Mutation_p.F82S	NM_032646	NP_116035	Q9BSA4	TTYH2_HUMAN	tweety 2 isoform 1	403	Helical; Name=5; (Potential).					chloride channel complex|plasma membrane	chloride channel activity|protein binding			ovary(3)|large_intestine(1)	4						GCCCTCGCCTTCTCCACCATG	0.617			NA											4	97					0	0	0.000248	0	0
ST6GALNAC1	55808	broad.mit.edu	37	17	74625395	74625395	+	Missense_Mutation	SNP	G	G	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr17:74625395G>T	uc002jsh.2	-	2	704	c.530C>A	c.(529-531)TCC>TAC	p.S177Y	ST6GALNAC1_uc002jsi.2_Missense_Mutation_p.S45Y|ST6GALNAC1_uc002jsj.2_RNA	NM_018414	NP_060884	Q9NSC7	SIA7A_HUMAN	sialyltransferase 7A	177	Lumenal (Potential).				protein glycosylation	integral to Golgi membrane	alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity				0						CACCGTCCTGGAGGCCGTCAG	0.592			NA											13	382					4.93089e-13	6.71745e-13	0.00245	1	0
CDKN2D	1032	broad.mit.edu	37	19	10677773	10677773	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:10677773G>A	uc002mpa.2	-	2	764	c.462C>T	c.(460-462)CTC>CTT	p.L154L	KRI1_uc002mox.1_5'Flank|KRI1_uc002moy.1_5'Flank|CDKN2D_uc002mpb.2_Silent_p.L154L	NM_001800	NP_001791	P55273	CDN2D_HUMAN	cyclin-dependent kinase inhibitor 2D	154	ANK 4.				anti-apoptosis|autophagic cell death|cell cycle arrest|DNA synthesis involved in DNA repair|G1 phase of mitotic cell cycle|G1/S transition of mitotic cell cycle|negative regulation of caspase activity|negative regulation of cell growth|negative regulation of cell proliferation|regulation of cyclin-dependent protein kinase activity|response to retinoic acid|response to UV|response to vitamin D	cytosol|nucleus	cyclin-dependent protein kinase inhibitor activity|protein kinase binding				0			Epithelial(33;1.58e-05)|all cancers(31;6.36e-05)			GGATGTCCACGAGGTCCTGAG	0.607			NA							Familial_Malignant_Melanoma_and_Tumors_of_the_Nervous_System				17	124					0	0	0.006122	0	0
EMR2	30817	broad.mit.edu	37	19	14866619	14866619	+	Silent	SNP	C	C	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:14866619C>A	uc002mzp.1	-	13	1719	c.1263G>T	c.(1261-1263)CTG>CTT	p.L421L	EMR2_uc010dzs.1_Intron|EMR2_uc010xnw.1_Silent_p.L421L|EMR2_uc002mzo.1_Silent_p.L410L|EMR2_uc002mzq.1_Silent_p.L361L|EMR2_uc002mzr.1_Silent_p.L372L|EMR2_uc002mzs.1_Silent_p.L279L|EMR2_uc002mzt.1_Silent_p.L317L|EMR2_uc002mzu.1_Silent_p.L328L|EMR2_uc010xnx.1_Intron|EMR2_uc010xny.1_Intron	NM_013447	NP_038475	Q9UHX3	EMR2_HUMAN	egf-like module containing, mucin-like, hormone	421	Extracellular (Potential).				cell adhesion|neuropeptide signaling pathway	integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity			lung(2)|ovary(1)|skin(1)	4						TCTCAGGTTCCAGGACCAGAG	0.592			NA											11	80					3.07112e-06	3.90115e-06	0.000978	1	0
GMIP	51291	broad.mit.edu	37	19	19751158	19751158	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:19751158C>T	uc002nnd.2	-	6	493	c.376G>A	c.(376-378)GCT>ACT	p.A126T	GMIP_uc010xrb.1_Missense_Mutation_p.A126T|GMIP_uc010xrc.1_Missense_Mutation_p.A126T	NM_016573	NP_057657	Q9P107	GMIP_HUMAN	GEM interacting protein	126					negative regulation of Rho GTPase activity|small GTPase mediated signal transduction	cytosol	metal ion binding|protein binding|Rho GTPase activator activity			ovary(1)	1						GTGCTCTTAGCAAACTCCAGC	0.607			NA											31	174					0	0	0.002836	0	0
PLEKHF1	79156	broad.mit.edu	37	19	30164791	30164791	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:30164791C>T	uc002nsh.3	+	2	147	c.45C>T	c.(43-45)ATC>ATT	p.I15I	PLEKHF1_uc002nsi.3_Silent_p.I100I	NM_024310	NP_077286	Q96S99	PKHF1_HUMAN	apoptosis-inducing protein D	15					apoptosis	lysosome|nucleus|perinuclear region of cytoplasm	metal ion binding				0	Ovarian(5;0.000567)|Breast(6;0.0602)|Esophageal squamous(110;0.239)		UCEC - Uterine corpus endometrioid carcinoma (4;2.65e-06)|STAD - Stomach adenocarcinoma(5;1.7e-06)|Lung(7;0.0623)|LUAD - Lung adenocarcinoma(5;0.0989)|BRCA - Breast invasive adenocarcinoma(6;0.225)			GCCAGCGCATCGCGGCAGTGG	0.662			NA											16	78					0	0	0.001523	0	0
ATP1A3	478	broad.mit.edu	37	19	42472957	42472957	+	Silent	SNP	C	C	T	rs150417636		TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:42472957C>T	uc002osg.2	-	20	2953	c.2799G>A	c.(2797-2799)TCG>TCA	p.S933S	ATP1A3_uc010xwf.1_Silent_p.S944S|ATP1A3_uc010xwg.1_Silent_p.S903S|ATP1A3_uc010xwh.1_Silent_p.S946S|ATP1A3_uc002osh.2_Silent_p.S933S	NM_152296	NP_689509	P13637	AT1A3_HUMAN	Na+/K+ -ATPase alpha 3 subunit	933	Cytoplasmic (Potential).				ATP biosynthetic process	endoplasmic reticulum|Golgi apparatus	ATP binding|metal ion binding|sodium:potassium-exchanging ATPase activity			ovary(1)|pancreas(1)	2						GCTGGAAGACCGAGTTCCTCC	0.577			NA											16	89					0	0	0.006122	0	0
GPR4	2828	broad.mit.edu	37	19	46094725	46094725	+	Missense_Mutation	SNP	C	C	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr19:46094725C>A	uc002pcm.2	-	2	1345	c.400G>T	c.(400-402)GCC>TCC	p.A134S	OPA3_uc010xxk.1_Intron	NM_005282	NP_005273	P46093	GPR4_HUMAN	G protein-coupled receptor 4	134	Helical; Name=4; (Potential).					integral to plasma membrane	G-protein coupled receptor activity			ovary(2)	2				OV - Ovarian serous cystadenocarcinoma(262;0.0071)|GBM - Glioblastoma multiforme(486;0.128)|Epithelial(262;0.223)		ACGGCCACGGCGGTCTTGACG	0.662	Esophageal Squamous(117;181 1612 1673 14956 42937)		NA											12	100					1.3612e-06	1.77713e-06	0.003163	1	0
WASH2P	375260	broad.mit.edu	37	2	114355998	114355998	+	Missense_Mutation	SNP	C	C	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr2:114355998C>G	uc002tkh.2	+	5	674	c.616C>G	c.(616-618)CAC>GAC	p.H206D	WASH2P_uc002tka.2_RNA|WASH2P_uc002tkb.2_RNA|WASH2P_uc002tkd.2_RNA	NM_182905	NP_878908			WAS protein family homolog 1												0						CCAAGGTGGGCACTTGATGTC	0.612			NA											3	13					0	0	0.000602	0	0
TTN	7273	broad.mit.edu	37	2	179413470	179413470	+	Silent	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr2:179413470T>C	uc010zfg.1	-	288	85403	c.85179A>G	c.(85177-85179)AAA>AAG	p.K28393K	uc002umo.2_Intron|uc002ump.1_Intron|TTN_uc010zfh.1_Silent_p.K22088K|TTN_uc010zfi.1_Silent_p.K22021K|TTN_uc010zfj.1_Silent_p.K21896K	NM_133378	NP_596869	Q8WZ42	TITIN_HUMAN	titin isoform N2-A	29320							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			ovary(58)|stomach(19)|large_intestine(17)|lung(16)|skin(16)|breast(10)|pancreas(7)|kidney(4)|central_nervous_system(3)|urinary_tract(2)|upper_aerodigestive_tract(1)	153			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			TAGAGTCTGGTTTGCTCCACA	0.463			NA											3	110					0	0	0.000248	0	0
RNF25	64320	broad.mit.edu	37	2	219529102	219529102	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr2:219529102G>C	uc002vit.2	-	10	1046	c.958C>G	c.(958-960)CCA>GCA	p.P320A	RNF25_uc010fvw.2_Missense_Mutation_p.P208A	NM_022453	NP_071898	Q96BH1	RNF25_HUMAN	ring finger protein 25	320					positive regulation of NF-kappaB transcription factor activity	cytosol|nucleus	NF-kappaB binding|ubiquitin-protein ligase activity|zinc ion binding			ovary(1)|central_nervous_system(1)	2		Renal(207;0.0474)		Epithelial(149;6.99e-07)|all cancers(144;0.000129)|LUSC - Lung squamous cell carcinoma(224;0.008)|Lung(261;0.00942)		CTGGTCCCTGGAATCTTCTCA	0.582			NA											3	211					0	0	0.004672	0	0
ZNF133	7692	broad.mit.edu	37	20	18295923	18295923	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr20:18295923C>T	uc010gcq.2	+	5	733	c.428C>T	c.(427-429)GCA>GTA	p.A143V	ZNF133_uc010zrv.1_Missense_Mutation_p.A146V|ZNF133_uc010zrw.1_Missense_Mutation_p.A80V|ZNF133_uc010gcr.2_Missense_Mutation_p.A143V|ZNF133_uc010zrx.1_Missense_Mutation_p.A48V|ZNF133_uc002wql.3_Missense_Mutation_p.A142V|ZNF133_uc010gcs.2_Missense_Mutation_p.A142V|ZNF133_uc010zry.1_Missense_Mutation_p.A48V|ZNF133_uc002wqm.2_Missense_Mutation_p.A143V	NM_003434	NP_003425	P52736	ZN133_HUMAN	zinc finger protein 133	143						nucleus	DNA binding|protein binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(1)|pancreas(1)	2						AGTGATCAAGCAGAAGGTCCT	0.587			NA											34	259					0	0	0.00623	0	0
APOL5	80831	broad.mit.edu	37	22	36122633	36122633	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr22:36122633G>C	uc003aof.2	+	3	518	c.518G>C	c.(517-519)GGG>GCG	p.G173A		NM_030642	NP_085145	Q9BWW9	APOL5_HUMAN	apolipoprotein L5	173					lipid metabolic process|lipid transport|lipoprotein metabolic process	cytoplasm|extracellular region	high-density lipoprotein particle binding|lipid binding|protein binding				0						TCAGCAACTGGGACAGGGTTG	0.547			NA											26	198					0	0	0.005443	0	0
DNAH1	25981	broad.mit.edu	37	3	52429049	52429049	+	Missense_Mutation	SNP	C	C	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:52429049C>G	uc011bef.1	+	68	11203	c.10942C>G	c.(10942-10944)CTG>GTG	p.L3648V	DNAH1_uc003ddv.2_Missense_Mutation_p.L506V	NM_015512	NP_056327	Q9P2D7	DYH1_HUMAN	dynein, axonemal, heavy chain 1	3713	AAA 6 (By similarity).				ciliary or flagellar motility|microtubule-based movement|response to mechanical stimulus	axonemal dynein complex|cilium axoneme|cytoplasm|microtubule	ATP binding|ATPase activity|microtubule motor activity			large_intestine(3)	3				BRCA - Breast invasive adenocarcinoma(193;2.02e-05)|OV - Ovarian serous cystadenocarcinoma(275;0.000207)|Kidney(197;0.0022)|KIRC - Kidney renal clear cell carcinoma(197;0.00245)		GGCCACCAACCTGGAGCCACG	0.617			NA											7	23					0	0	0.00308	0	0
STAG1	10274	broad.mit.edu	37	3	136342081	136342081	+	Silent	SNP	A	A	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:136342081A>G	uc003era.1	-	3	331	c.39T>C	c.(37-39)ACT>ACC	p.T13T	STAG1_uc003erb.1_Silent_p.T13T|STAG1_uc003erc.1_5'UTR|STAG1_uc010hua.1_5'UTR|STAG1_uc003ere.2_Silent_p.T13T	NM_005862	NP_005853	Q8WVM7	STAG1_HUMAN	stromal antigen 1	13					cell division|chromosome segregation|mitotic metaphase/anaphase transition|mitotic prometaphase	cell junction|chromatin|chromosome, centromeric region|nucleoplasm	protein binding			ovary(2)	2						TAGTTTCATTAGTTGAATCCC	0.403			NA											3	109					0	0	0.004672	0	0
NLGN1	22871	broad.mit.edu	37	3	173997033	173997033	+	Silent	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:173997033T>C	uc003fio.1	+	6	1665	c.1242T>C	c.(1240-1242)GCT>GCC	p.A414A	NLGN1_uc010hww.1_Silent_p.A454A|NLGN1_uc003fip.1_Silent_p.A414A	NM_014932	NP_055747	Q8N2Q7	NLGN1_HUMAN	neuroligin 1	431	Extracellular (Potential).				calcium-dependent cell-cell adhesion|neuron cell-cell adhesion|neuronal signal transduction|positive regulation of dendritic spine development|positive regulation of excitatory postsynaptic membrane potential|positive regulation of intracellular protein kinase cascade|positive regulation of synaptogenesis|protein targeting|regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity|regulation of N-methyl-D-aspartate selective glutamate receptor activity|synapse assembly|synaptic vesicle targeting	cell junction|cell surface|dendrite|integral to plasma membrane|postsynaptic density|postsynaptic membrane	cell adhesion molecule binding|neurexin binding|receptor activity			lung(2)|upper_aerodigestive_tract(1)|central_nervous_system(1)|skin(1)|ovary(1)|pancreas(1)	7	Ovarian(172;0.0025)		LUSC - Lung squamous cell carcinoma(14;5.36e-13)|Lung(28;9.49e-13)			TTGACTTTGCTGTTTCAAATT	0.338			NA											6	51					0	0	0.001984	0	0
ABCF3	55324	broad.mit.edu	37	3	183909004	183909004	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:183909004C>T	uc003fmz.2	+	16	1663	c.1530C>T	c.(1528-1530)CGC>CGT	p.R510R	ABCF3_uc003fna.2_Silent_p.R504R|ABCF3_uc003fnb.2_Silent_p.R191R	NM_018358	NP_060828	Q9NUQ8	ABCF3_HUMAN	ATP-binding cassette, sub-family F (GCN20),	510	ABC transporter 2.						ATP binding|ATPase activity			ovary(3)|lung(1)	4	all_cancers(143;1.12e-10)|Ovarian(172;0.0339)		Epithelial(37;2.35e-34)|OV - Ovarian serous cystadenocarcinoma(80;2.72e-22)			TCTTCAGTCGCCTCTCTGTGT	0.537			NA											43	253					0	0	0.00361	0	0
SDHAP2	727956	broad.mit.edu	37	3	195400795	195400795	+	Missense_Mutation	SNP	C	C	T	rs7615357	by1000genomes	TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:195400795C>T	uc003fuw.2	+	9	1285	c.91C>T	c.(91-93)CGC>TGC	p.R31C	SDHAP2_uc011btb.1_Missense_Mutation_p.S178L|SDHAP2_uc011btc.1_RNA|SDHAP2_uc003fuv.2_RNA					SubName: Full=cDNA FLJ16373 fis, clone THYMU3000269, highly similar to Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1);												0						GGGGCAAACTCGCTGTTGGAC	0.592			NA											4	70					0	0	0.001168	0	0
SDHAP2	727956	broad.mit.edu	37	3	195400799	195400799	+	Missense_Mutation	SNP	G	G	A	rs7635172	by1000genomes	TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr3:195400799G>A	uc003fuw.2	+	9	1289	c.95G>A	c.(94-96)TGT>TAT	p.C32Y	SDHAP2_uc011btb.1_Silent_p.L179L|SDHAP2_uc011btc.1_RNA|SDHAP2_uc003fuv.2_RNA					SubName: Full=cDNA FLJ16373 fis, clone THYMU3000269, highly similar to Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1);												0						CAAACTCGCTGTTGGACCTGG	0.597			NA											4	72					0	0	0.001168	0	0
KIAA0922	23240	broad.mit.edu	37	4	154555427	154555427	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr4:154555427C>T	uc003inm.3	+	33	4461	c.4409C>T	c.(4408-4410)CCA>CTA	p.P1470L	KIAA0922_uc010ipp.2_Missense_Mutation_p.P1471L|KIAA0922_uc010ipq.2_Missense_Mutation_p.P1239L	NM_015196	NP_056011	A2VDJ0	T131L_HUMAN	hypothetical protein LOC23240 isoform 2	1470	Cytoplasmic (Potential).					integral to membrane				upper_aerodigestive_tract(1)|ovary(1)	2	all_hematologic(180;0.093)	Renal(120;0.118)				AATGCCTTTCCAGAAGGTAAG	0.423			NA											17	139					0	0	0.007413	0	0
GPR98	84059	broad.mit.edu	37	5	90136558	90136558	+	Missense_Mutation	SNP	C	C	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:90136558C>G	uc003kju.2	+	78	16871	c.16775C>G	c.(16774-16776)CCT>CGT	p.P5592R	GPR98_uc003kjt.2_Missense_Mutation_p.P3298R|GPR98_uc003kjw.2_Missense_Mutation_p.P1253R	NM_032119	NP_115495	Q8WXG9	GPR98_HUMAN	G protein-coupled receptor 98 precursor	5592	Extracellular (Potential).				cell communication|cell-cell adhesion|maintenance of organ identity|neuropeptide signaling pathway|photoreceptor cell maintenance	cell surface|cytoplasm|integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity			ovary(11)|central_nervous_system(3)|pancreas(2)	16		all_cancers(142;1.05e-09)|all_epithelial(76;1.81e-12)|all_lung(232;5.41e-06)|Lung NSC(167;1.72e-05)|Ovarian(174;0.00948)|Colorectal(57;0.133)|Breast(839;0.192)		OV - Ovarian serous cystadenocarcinoma(54;7.01e-30)|Epithelial(54;6.79e-25)|all cancers(79;1.88e-20)		AATTCATTTCCTAAACGCTTC	0.433			NA											15	146					0	0	0.006122	0	0
PITX1	5307	broad.mit.edu	37	5	134364489	134364489	+	Missense_Mutation	SNP	C	C	T	rs140746945		TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:134364489C>T	uc010jea.2	-	3	1318	c.925G>A	c.(925-927)GCG>ACG	p.A309T	PITX1_uc011cxy.1_Missense_Mutation_p.A309T	NM_002653	NP_002644	P78337	PITX1_HUMAN	paired-like homeodomain transcription factor 1	309						nucleolus	sequence-specific DNA binding			ovary(1)	1			KIRC - Kidney renal clear cell carcinoma(527;0.0101)|Kidney(363;0.0233)	READ - Rectum adenocarcinoma(2;0.0607)		TACTGGCACGCGTTGAGGCCC	0.393			NA											6	31					0	0	0.001168	0	0
PCDHA2	56146	broad.mit.edu	37	5	140174709	140174709	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:140174709C>T	uc003lhd.2	+	1	266	c.160C>T	c.(160-162)CTG>TTG	p.L54L	PCDHA1_uc003lha.2_Intron|PCDHA1_uc003lhb.2_Intron|PCDHA2_uc003lhc.1_Silent_p.L54L|PCDHA2_uc011czy.1_Silent_p.L54L	NM_018905	NP_061728	Q9Y5H9	PCDA2_HUMAN	protocadherin alpha 2 isoform 1 precursor	54	Extracellular (Potential).|Cadherin 1.				homophilic cell adhesion|nervous system development	integral to plasma membrane	calcium ion binding|protein binding			ovary(4)	4			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GGACCTGGGGCTGGAGCTGGA	0.647			NA											13	178					0	0	0.001368	0	0
PCDHGA1	56114	broad.mit.edu	37	5	140712646	140712646	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:140712646G>C	uc003lji.1	+	1	2395	c.2395G>C	c.(2395-2397)GAA>CAA	p.E799Q	PCDHGA1_uc011dan.1_Missense_Mutation_p.E799Q	NM_018912	NP_061735	Q9Y5H4	PCDG1_HUMAN	protocadherin gamma subfamily A, 1 isoform 1	799	Cytoplasmic (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(1)|breast(1)|pancreas(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GTCTTTACTTGAAGACAAAAA	0.418			NA											7	145					0	0	0.001984	0	0
G3BP1	10146	broad.mit.edu	37	5	151166212	151166212	+	Missense_Mutation	SNP	G	G	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:151166212G>T	uc003lun.2	+	2	202	c.31G>T	c.(31-33)GTC>TTC	p.V11F	G3BP1_uc010jhy.1_Missense_Mutation_p.V11F|G3BP1_uc003lum.2_Missense_Mutation_p.V11F|G3BP1_uc011dcu.1_5'UTR|G3BP1_uc010jhz.2_5'UTR|uc003luo.1_5'Flank|uc003lup.1_5'Flank	NM_005754	NP_005745	Q13283	G3BP1_HUMAN	Ras-GTPase-activating protein SH3-domain-binding	11	NTF2.				Ras protein signal transduction|transport	cytosol|nucleus|plasma membrane	ATP binding|ATP-dependent DNA helicase activity|ATP-dependent RNA helicase activity|DNA binding|endonuclease activity|protein binding|RNA binding			skin(3)|ovary(1)	4		all_hematologic(541;0.0338)|Medulloblastoma(196;0.091)	Kidney(363;0.000171)|KIRC - Kidney renal clear cell carcinoma(527;0.000785)			TCCCCTGCTGGTCGGGCGGGA	0.488			NA											24	130					3.08376e-08	4.14105e-08	0.00333	1	0
HIST1H1C	3006	broad.mit.edu	37	6	26056605	26056605	+	Missense_Mutation	SNP	C	C	G			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr6:26056605C>G	uc003nfw.2	-	1	95	c.52G>C	c.(52-54)GCC>CCC	p.A18P		NM_005319	NP_005310	P16403	H12_HUMAN	histone cluster 1, H1c	18					nucleosome assembly	nucleosome|nucleus	DNA binding			ovary(3)|skin(2)	5						TTTACAGGGGCCTTCTCCGCA	0.617			NA											7	119					0	0	0.00308	0	0
ASL	435	broad.mit.edu	37	7	65546942	65546942	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr7:65546942C>T	uc003tuo.2	+	3	276	c.165C>T	c.(163-165)CTC>CTT	p.L55L	ASL_uc011kdu.1_Silent_p.L55L|ASL_uc010kzx.1_Silent_p.L55L|ASL_uc011kdv.1_Silent_p.L55L|ASL_uc003tup.2_Silent_p.L55L|ASL_uc003tur.2_Silent_p.L55L|ASL_uc003tuq.2_Silent_p.L55L	NM_000048	NP_000039	P04424	ARLY_HUMAN	argininosuccinate lyase isoform 1	55					arginine biosynthetic process via ornithine|arginine catabolic process|urea cycle	cytosol	argininosuccinate lyase activity			breast(2)	2					L-Arginine(DB00125)	CAGGGCTCCTCACCAAGGCCG	0.617			NA											7	46					0	0	0.00308	0	0
WRN	7486	broad.mit.edu	37	8	30977835	30977835	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr8:30977835C>T	uc003xio.3	+	21	3313	c.2525C>T	c.(2524-2526)CCT>CTT	p.P842L	WRN_uc010lvk.2_Missense_Mutation_p.P309L	NM_000553	NP_000544	Q14191	WRN_HUMAN	Werner syndrome protein	842	Helicase C-terminal.				base-excision repair|cellular response to starvation|DNA recombination|DNA synthesis involved in DNA repair|multicellular organismal aging|nucleolus to nucleoplasm transport|positive regulation of hydrolase activity|regulation of apoptosis|replication fork processing|response to oxidative stress|response to UV-C|telomere maintenance	centrosome|nucleolus|nucleoplasm	3'-5' exonuclease activity|ATP binding|ATP-dependent 3'-5' DNA helicase activity|bubble DNA binding|four-way junction helicase activity|G-quadruplex DNA binding|magnesium ion binding|manganese ion binding|protein complex binding|protein homodimerization activity|Y-form DNA binding			ovary(2)|kidney(2)|large_intestine(1)|lung(1)|skin(1)	7		Breast(100;0.195)		KIRC - Kidney renal clear cell carcinoma(542;0.147)|Kidney(114;0.176)|Colorectal(111;0.192)		TACGGTGCTCCTAAGGACATG	0.428	Ovarian(18;161 598 2706 14834 27543)		NA	Mis|N|F|S			osteosarcoma|meningioma|others		Genes_defective_in_diseases_associated_with_sensitivity_to_DNA_damaging_agents	Werner_syndrome				14	77					0	0	0.00499	0	0
PRKDC	5591	broad.mit.edu	37	8	48710830	48710830	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr8:48710830G>C	uc003xqi.2	-	74	10483	c.10426C>G	c.(10426-10428)CCA>GCA	p.P3476A	PRKDC_uc003xqj.2_Missense_Mutation_p.P3476A|PRKDC_uc011ldh.1_Intron	NM_006904	NP_008835	P78527	PRKDC_HUMAN	protein kinase, DNA-activated, catalytic	3476	FAT.				cellular response to insulin stimulus|double-strand break repair via nonhomologous end joining|peptidyl-serine phosphorylation|positive regulation of transcription from RNA polymerase II promoter	DNA-dependent protein kinase-DNA ligase 4 complex|transcription factor complex	ATP binding|DNA binding|DNA-dependent protein kinase activity|transcription factor binding			lung(12)|central_nervous_system(9)|ovary(6)|skin(4)|large_intestine(3)	34		all_cancers(86;0.0336)|all_epithelial(80;0.00111)|Lung NSC(129;0.00363)|all_lung(136;0.00391)				GTCTCCTCTGGATACCGTTCT	0.363	Esophageal Squamous(79;1091 1253 12329 31680 40677)		NA						NHEJ					3	63					0	0	0.004672	0	0
TEK	7010	broad.mit.edu	37	9	27204929	27204929	+	Missense_Mutation	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr9:27204929G>A	uc003zqi.3	+	14	2672	c.2230G>A	c.(2230-2232)GGG>AGG	p.G744R	TEK_uc011lno.1_Missense_Mutation_p.G701R|TEK_uc011lnp.1_Missense_Mutation_p.G597R|TEK_uc003zqj.1_Missense_Mutation_p.G678R	NM_000459	NP_000450	Q02763	TIE2_HUMAN	TEK tyrosine kinase, endothelial precursor	744	Extracellular (Potential).				angiogenesis|blood coagulation|cell-cell signaling|leukocyte migration|positive regulation of ERK1 and ERK2 cascade|positive regulation of protein kinase B signaling cascade|protein oligomerization|transmembrane receptor protein tyrosine kinase signaling pathway	apical plasma membrane|basolateral plasma membrane|cell surface|integral to plasma membrane|membrane raft|microvillus	ATP binding|protein binding|transmembrane receptor protein tyrosine kinase activity			ovary(3)|central_nervous_system(3)|breast(3)|lung(2)|kidney(1)	12		all_neural(11;7.57e-10)|Myeloproliferative disorder(762;0.0255)		Lung(218;4.08e-05)|LUSC - Lung squamous cell carcinoma(38;0.00027)		CCTCGGAGGGGGGAAGATGCT	0.507			NA											11	122					0	0	0.00245	0	0
C9orf11	54586	broad.mit.edu	37	9	27289707	27289707	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr9:27289707G>A	uc003zql.2	-	6	528	c.444C>T	c.(442-444)GTC>GTT	p.V148V	C9orf11_uc011lnq.1_Silent_p.V119V	NM_020641	NP_065692	Q9NQ60	AFAF_HUMAN	Acr formation associated factor isoform 1	148	Vesicular (Potential).					acrosomal membrane|integral to membrane				ovary(1)|central_nervous_system(1)	2				OV - Ovarian serous cystadenocarcinoma(39;7.39e-08)|Lung(218;1.26e-05)|LUSC - Lung squamous cell carcinoma(38;0.000106)		TATCATCCATGACCACTGCTG	0.249			NA											4	24					0	0	0.000248	0	0
STOML2	30968	broad.mit.edu	37	9	35102793	35102793	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr9:35102793G>C	uc003zwi.2	-	2	136	c.73C>G	c.(73-75)CCG>GCG	p.P25A	STOML2_uc003zwh.2_5'UTR|STOML2_uc003zwj.2_5'UTR|STOML2_uc011lou.1_Missense_Mutation_p.P25A|STOML2_uc003zwk.2_5'UTR	NM_013442	NP_038470	Q9UJZ1	STML2_HUMAN	stomatin (EPB72)-like 2	25						cytoskeleton	receptor binding				0			LUSC - Lung squamous cell carcinoma(32;0.00343)|Lung(28;0.00778)			GCGCGGCGCGGAGCGCGGCCA	0.647			NA											3	53					0	0	0.000248	0	0
RNF38	152006	broad.mit.edu	37	9	36353229	36353229	+	Missense_Mutation	SNP	G	G	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr9:36353229G>C	uc003zzh.2	-	7	1200	c.1009C>G	c.(1009-1011)CCA>GCA	p.P337A	RNF38_uc003zzi.2_Missense_Mutation_p.P287A|RNF38_uc003zzj.2_Missense_Mutation_p.P254A|RNF38_uc003zzk.2_Missense_Mutation_p.P254A|RNF38_uc003zzl.2_Missense_Mutation_p.P261A|RNF38_uc003zzm.2_Missense_Mutation_p.P254A	NM_022781	NP_073618	Q9H0F5	RNF38_HUMAN	ring finger protein 38 isoform 1	337	Pro-rich.						zinc ion binding			central_nervous_system(1)	1			STAD - Stomach adenocarcinoma(86;0.228)			GGAGCTGATGGAGGTAATGTT	0.438			NA											3	78					0	0	0.004672	0	0
TAL2	6887	broad.mit.edu	37	9	108424891	108424891	+	Silent	SNP	G	G	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr9:108424891G>A	uc004bct.2	+	1	154	c.114G>A	c.(112-114)CTG>CTA	p.L38L		NM_005421	NP_005412	Q16559	TAL2_HUMAN	T-cell acute lymphocytic leukemia 2	38	Helix-loop-helix motif.				regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding				0						ACAAAAAGCTGAGCAAAAATG	0.527			NA	T	TRB@	T-ALL								4	79					0	0	0.000248	0	0
ARSD	414	broad.mit.edu	37	X	2825346	2825346	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chrX:2825346C>T	uc004cqy.2	-	10	1824	c.1748G>A	c.(1747-1749)TGT>TAT	p.C583Y	ARSD_uc004cqz.1_RNA	NM_001669	NP_001660	P51689	ARSD_HUMAN	arylsulfatase D isoform a precursor	583						lysosome	arylsulfatase activity|metal ion binding				0		all_cancers(21;4.28e-07)|all_epithelial(21;2.07e-08)|all_lung(23;2.81e-05)|Lung NSC(23;0.000693)|Lung SC(21;0.122)				GTGGCATGAACAGAACGGGAA	0.572			NA											14	73					0	0	0.004007	0	0
KDM6A	7403	broad.mit.edu	37	X	44938572	44938572	+	Silent	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chrX:44938572C>T	uc004dge.3	+	20	3495	c.3120C>T	c.(3118-3120)GCC>GCT	p.A1040A	KDM6A_uc010nhk.2_Silent_p.A1006A|KDM6A_uc011mkz.1_Silent_p.A1092A|KDM6A_uc011mla.1_Silent_p.A995A|KDM6A_uc011mlb.1_Silent_p.A1047A|KDM6A_uc011mlc.1_Silent_p.A744A|KDM6A_uc011mld.1_Silent_p.A679A	NM_021140	NP_066963	O15550	KDM6A_HUMAN	ubiquitously transcribed tetratricopeptide	1040					histone H3-K4 methylation		metal ion binding|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen			kidney(24)|haematopoietic_and_lymphoid_tissue(23)|oesophagus(11)|large_intestine(7)|lung(5)|breast(4)|central_nervous_system(3)|urinary_tract(3)|endometrium(2)|pancreas(2)	84						AGTACCAGGCCTCCTCATTCC	0.348	Colon(129;1273 1667 15230 27352 52914)		NA	D|N|F|S		renal|oesophageal SCC|MM								13	51					0	0	0.00245	0	0
CXCR3	2833	broad.mit.edu	37	X	70836739	70836739	+	Missense_Mutation	SNP	C	C	T			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chrX:70836739C>T	uc004eaf.2	-	2	651	c.583G>A	c.(583-585)GAC>AAC	p.D195N	BCYRN1_uc011mpt.1_Intron|CXCR3_uc011mpx.1_Missense_Mutation_p.D242N	NM_001504	NP_001495	P49682	CXCR3_HUMAN	chemokine (C-X-C motif) receptor 3 isoform A	195	Extracellular (Potential).				cell adhesion|cellular component movement|chemotaxis|elevation of cytosolic calcium ion concentration	cytoplasm|integral to plasma membrane	C-X-C chemokine receptor activity			ovary(2)|central_nervous_system(1)	3	Renal(35;0.156)					AGGCGCTCGTCGTGGTGGGCC	0.587			NA											5	27					0	0	0.006214	0	0
ENOX2	10495	broad.mit.edu	37	X	129771261	129771261	+	Missense_Mutation	SNP	T	T	C			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chrX:129771261T>C	uc004evw.2	-	12	1758	c.1340A>G	c.(1339-1341)GAC>GGC	p.D447G	ENOX2_uc004evx.2_Missense_Mutation_p.D418G|ENOX2_uc004evy.2_Missense_Mutation_p.D418G|ENOX2_uc004evv.2_Missense_Mutation_p.D272G	NM_182314	NP_872114	Q16206	ENOX2_HUMAN	ecto-NOX disulfide-thiol exchanger 2 isoform b	447	Potential.				cell growth|electron transport chain|regulation of growth|transport|ultradian rhythm	cytosol|external side of plasma membrane|extracellular space	nucleic acid binding|nucleotide binding|protein disulfide oxidoreductase activity			ovary(1)	1						TTTGTTAGGGTCATCTTCTCT	0.473	Ovarian(101;828 1506 2951 9500 35258)		NA											4	345					0	0	0.000602	0	0
DCT	1638	broad.mit.edu	37	13	95121039	95121040	+	Frame_Shift_Ins	INS	-	-	A			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	-	-	-	-	-	-	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr13:95121039_95121040insA	uc001vlv.3	-	2	982_983	c.555_556insT	c.(553-558)TTTGTGfs	p.F185fs	DCT_uc010afh.2_Frame_Shift_Ins_p.F185fs	NM_001922	NP_001913	P40126	TYRP2_HUMAN	dopachrome tautomerase isoform 1	185_186	Lumenal, melanosome (Potential).				epidermis development|melanin biosynthetic process from tyrosine	cytosol|integral to membrane|melanosome membrane|microsome	copper ion binding|dopachrome isomerase activity|oxidoreductase activity			ovary(2)|upper_aerodigestive_tract(1)|central_nervous_system(1)|pancreas(1)	5	all_neural(89;0.0684)|Medulloblastoma(90;0.163)	all_cancers(2;3.71e-42)|all_epithelial(2;3.76e-31)|all_lung(2;5.16e-14)|Lung NSC(4;1.33e-13)|Breast(118;0.0013)|Hepatocellular(115;0.00886)|Renal(2;0.00988)		COAD - Colon adenocarcinoma(199;7.07e-05)|GBM - Glioblastoma multiforme(99;0.000472)		TGGAGCCACACAAAAAAATCAT	0.45			NA											35	200	---	---	---	---	NA	NA	NA	NA	NA
ANKHD1-EIF4EBP3	404734	broad.mit.edu	37	5	139905682	139905683	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	AG	AG	-	-	AG	AG	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr5:139905682_139905683delAG	uc003lfs.1	+	26	4718_4719	c.4594_4595delAG	c.(4594-4596)AGGfs	p.R1532fs	ANKHD1_uc003lfr.2_Frame_Shift_Del_p.R1532fs|ANKHD1_uc003lfu.1_Frame_Shift_Del_p.R1012fs|ANKHD1-EIF4EBP3_uc011czh.1_Frame_Shift_Del_p.R271fs|ANKHD1_uc003lfw.2_Frame_Shift_Del_p.R170fs|ANKHD1_uc010jfl.2_5'UTR|ANKHD1-EIF4EBP3_uc003lfx.1_5'Flank	NM_020690	NP_065741	Q8IWZ2	Q8IWZ2_HUMAN	ANKHD1-EIF4EBP3 protein	1532						cytoplasm|nucleus	RNA binding			ovary(6)	6			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TGGGAAAAAAAGGGCCAATGTG	0.421			NA											24	166	---	---	---	---	NA	NA	NA	NA	NA
EGFR	1956	broad.mit.edu	37	7	55242465	55242479	+	In_Frame_Del	DEL	GGAATTAAGAGAAGC	GGAATTAAGAGAAGC	-	rs121913421		TCGA-44-2661-01A-01D-1105-08	TCGA-44-2661-10A-01D-1105-08	GGAATTAAGAGAAGC	GGAATTAAGAGAAGC	-	-	GGAATTAAGAGAAGC	GGAATTAAGAGAAGC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	3c3a2e7c-9aa0-495e-95c7-87f661b9ed92	2040f069-44ef-43cf-8ad0-51a6fd583ab6	g.chr7:55242465_55242479delGGAATTAAGAGAAGC	uc003tqk.2	+	19	2481_2495	c.2235_2249delGGAATTAAGAGAAGC	c.(2233-2250)AAGGAATTAAGAGAAGCA>AAA	p.ELREA746del	EGFR_uc010kzg.1_In_Frame_Del_p.ELREA701del|EGFR_uc011kco.1_In_Frame_Del_p.ELREA693del	NM_005228	NP_005219	P00533	EGFR_HUMAN	epidermal growth factor receptor isoform a	746_750	Cytoplasmic (Potential).|Protein kinase.		Missing (found in a lung cancer sample).		activation of phospholipase A2 activity by calcium-mediated signaling|activation of phospholipase C activity|axon guidance|cell proliferation|cell-cell adhesion|negative regulation of apoptosis|negative regulation of epidermal growth factor receptor signaling pathway|ossification|positive regulation of catenin import into nucleus|positive regulation of cell migration|positive regulation of cyclin-dependent protein kinase activity involved in G1/S|positive regulation of epithelial cell proliferation|positive regulation of MAP kinase activity|positive regulation of nitric oxide biosynthetic process|positive regulation of phosphorylation|positive regulation of protein kinase B signaling cascade|protein autophosphorylation|protein insertion into membrane|regulation of nitric-oxide synthase activity|regulation of peptidyl-tyrosine phosphorylation|response to stress|response to UV-A	basolateral plasma membrane|endoplasmic reticulum membrane|endosome|extracellular space|Golgi membrane|integral to membrane|nuclear membrane|Shc-EGFR complex	actin filament binding|ATP binding|double-stranded DNA binding|epidermal growth factor receptor activity|identical protein binding|MAP/ERK kinase kinase activity|protein heterodimerization activity|protein phosphatase binding|receptor signaling protein tyrosine kinase activity	p.E746_A750del(1613)|p.L747_P753>S(110)|p.L747_A750>P(74)|p.E746_S752>V(67)|p.L747_T751del(62)|p.E746_T751>A(30)|p.L747_S752del(28)|p.L747_T751>P(20)|p.E746_T751del(18)|p.L747_E749del(18)|p.K745_E749del(14)|p.E746_E749del(12)|p.E746_S752del(10)|p.L747_T751>S(7)|p.L747_P753>Q(7)|p.E746_P753>VS(6)|p.E746_A750>IP(5)|p.L747_T751>Q(5)|p.E746_T751>I(5)|p.E746_T751>V(5)|p.E746_S752>A(5)|p.E746_T751>IP(5)|p.E746_A750>QP(4)|p.E746V(4)|p.E746_S752>D(4)|p.K745_A750del(4)|p.L747S(3)|p.L747_S752>Q(3)|p.A750P(3)|p.E746_T751>VA(3)|p.E746_T751>VP(3)|p.E746_A750>RP(2)|p.E746_A750>S(2)|p.E746_S752>T(2)|p.A750_E758>P(2)|p.E746_T751>Q(2)|p.E746_T751>S(2)|p.E746_A750>DP(2)|p.E746_T751>L(2)|p.E746K(2)|p.E746_P753del(2)|p.E746_S752>I(2)|p.K745_E746insVPVAIK(2)|p.E746_A750>AP(2)|p.L747_K754>ST(1)|p.E746_A750>A(1)|p.E746_T751>P(1)|p.E746del(1)|p.A750_K754del(1)|p.L747_S752>QH(1)|p.L747P(1)|p.E746_A750>VP(1)|p.L747_K754>N(1)|p.L747_R748>FP(1)|p.K745_L747del(1)|p.L747_T751>A(1)|p.E746_P753>LS(1)|p.E746_P753>VQ(1)|p.E746_T751>LS(1)|p.A750_E758del(1)|p.E746_R748del(1)|p.I744_A750>VK(1)|p.E746I(1)|p.L747_K754del(1)|p.R748I(1)|p.E746_A750>KP(1)|p.E746_A750>EP(1)		lung(9213)|central_nervous_system(103)|stomach(41)|upper_aerodigestive_tract(39)|prostate(32)|ovary(31)|thyroid(24)|breast(11)|peritoneum(9)|oesophagus(9)|salivary_gland(9)|large_intestine(8)|kidney(8)|urinary_tract(6)|skin(5)|adrenal_gland(5)|soft_tissue(4)|bone(3)|NS(2)|pancreas(2)|haematopoietic_and_lymphoid_tissue(2)|thymus(2)|liver(2)|eye(1)	9571	all_cancers(1;1.57e-46)|all_epithelial(1;5.62e-37)|Lung NSC(1;9.29e-25)|all_lung(1;4.39e-23)|Esophageal squamous(2;7.55e-08)|Breast(14;0.0318)		GBM - Glioblastoma multiforme(1;0)|all cancers(1;2.19e-314)|Lung(13;4.65e-05)|LUSC - Lung squamous cell carcinoma(13;0.000168)|STAD - Stomach adenocarcinoma(5;0.00164)|Epithelial(13;0.0607)		Cetuximab(DB00002)|Erlotinib(DB00530)|Gefitinib(DB00317)|Lapatinib(DB01259)|Lidocaine(DB00281)|Panitumumab(DB01269)|Trastuzumab(DB00072)	TCGCTATCAAGGAATTAAGAGAAGCAACATCTCCG	0.479		E746_A750del(NCIH1650_LUNG)|E746K(HCC827_LUNG)|E746_A750del(PC14_LUNG)|L747_P753>Q(HCC4006_LUNG)	8	A|O|Mis		glioma|NSCLC	NSCLC			Lung_Cancer_Familial_Clustering_of	TCGA GBM(3;<1E-08)|TSP Lung(4;<1E-08)			7	145	---	---	---	---	NA	NA	NA	NA	NA
