Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	ACHILLES_Top_Genes	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
SLC25A34	284723	broad.mit.edu	37	1	16065758	16065758	+	Missense_Mutation	SNP	A	A	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr1:16065758A>G	uc001axb.1	+	5	944	c.772A>G	c.(772-774)ATC>GTC	p.I258V	SLC25A34_uc009vok.1_RNA	NM_207348	NP_997231	Q6PIV7	S2534_HUMAN	solute carrier family 25, member 34	258	Solcar 3.				transport	integral to membrane|mitochondrial inner membrane					0		Colorectal(325;0.00108)|Renal(390;0.00145)|Breast(348;0.00224)|Lung NSC(340;0.00566)|all_lung(284;0.00831)|Myeloproliferative disorder(586;0.0393)|Ovarian(437;0.0798)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0228)|Colorectal(212;5.96e-07)|COAD - Colon adenocarcinoma(227;3.56e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000115)|KIRC - Kidney renal clear cell carcinoma(229;0.00244)|STAD - Stomach adenocarcinoma(313;0.0072)|READ - Rectum adenocarcinoma(331;0.0649)		CATGGTGAAGATCTGGCGGCA	0.657			NA											11	58					0	0	0.000978159	0	0
CEPT1	10390	broad.mit.edu	37	1	111726191	111726191	+	Missense_Mutation	SNP	T	T	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr1:111726191T>G	uc001eah.1	+	8	1321	c.1113T>G	c.(1111-1113)ATT>ATG	p.I371M	CEPT1_uc001eai.1_Missense_Mutation_p.I371M|CEPT1_uc001eaj.1_Missense_Mutation_p.I371M|CEPT1_uc009wfz.1_Missense_Mutation_p.I105M	NM_001007794	NP_001007795	Q9Y6K0	CEPT1_HUMAN	choline/ethanolaminephosphotransferase	371	Helical; (Potential).					endoplasmic reticulum membrane|integral to membrane|nuclear membrane	diacylglycerol cholinephosphotransferase activity|ethanolaminephosphotransferase activity|metal ion binding				0		all_cancers(81;2.27e-05)|all_epithelial(167;7.36e-06)|all_lung(203;0.00018)|Lung NSC(277;0.000359)		Lung(183;0.0173)|Colorectal(144;0.0375)|all cancers(265;0.0701)|LUSC - Lung squamous cell carcinoma(189;0.0888)|Epithelial(280;0.103)|COAD - Colon adenocarcinoma(174;0.141)	Choline(DB00122)	ATGAATATATTGTACTTTGGA	0.363			NA											8	82					0	0	0.000274275	0	0
FCAMR	83953	broad.mit.edu	37	1	207135834	207135834	+	Nonsense_Mutation	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr1:207135834G>A	uc001hfa.3	-	5	876	c.376C>T	c.(376-378)CAG>TAG	p.Q126*	FCAMR_uc001hfb.2_Nonsense_Mutation_p.Q126*|FCAMR_uc009xca.1_Nonsense_Mutation_p.Q126*|FCAMR_uc001hfc.2_Nonsense_Mutation_p.Q101*	NM_001122980	NP_001116452	Q8WWV6	FCAMR_HUMAN	Fc receptor, IgA, IgM, high affinity isoform 2	81	Mediates immunoglobulin Fc fragment- binding (By similarity).|Extracellular (Potential).|Ig-like V-type.					integral to membrane|plasma membrane	receptor activity			ovary(1)	1						TAATGGCACTGGATGGTGACA	0.557	Ovarian(199;1883 2142 16966 44409 45154)		NA											6	24					0	0	0.00116845	0	0
C10orf28	27291	broad.mit.edu	37	10	99968660	99968660	+	Silent	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr10:99968660C>T	uc001kow.3	+	4	1084	c.789C>T	c.(787-789)GGC>GGT	p.G263G	C10orf28_uc001kox.3_Silent_p.G263G|C10orf28_uc001koy.3_Silent_p.G263G|C10orf28_uc009xvx.2_Silent_p.G263G|C10orf28_uc009xvy.2_Intron|C10orf28_uc001koz.3_Intron	NM_014472	NP_055287	Q4KMY3	Q4KMY3_HUMAN	growth inhibition and differentiation related	263							nucleotide binding			large_intestine(1)|skin(1)	2		Colorectal(252;0.234)		Epithelial(162;7.18e-11)|all cancers(201;8.75e-09)		GCAGCGGAGGCATCACCACTA	0.403			NA											5	64					0	0	0.00116845	0	0
FAM178A	55719	broad.mit.edu	37	10	102697161	102697161	+	Missense_Mutation	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr10:102697161G>A	uc001krt.3	+	10	2981	c.2439G>A	c.(2437-2439)ATG>ATA	p.M813I	FAM178A_uc001krs.2_Missense_Mutation_p.M813I	NM_018121	NP_060591	Q8IX21	F178A_HUMAN	hypothetical protein LOC55719 isoform 1	813											0						TTTGACAGATGATGTCAGTTC	0.279			NA											8	158					0	0	0.000157383	0	0
OR51A7	119687	broad.mit.edu	37	11	4929446	4929446	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr11:4929446C>T	uc010qyq.1	+	1	847	c.847C>T	c.(847-849)CCG>TCG	p.P283S		NM_001004749	NP_001004749	Q8NH64	O51A7_HUMAN	olfactory receptor, family 51, subfamily A,	283	Helical; Name=7; (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)|skin(1)	2		Medulloblastoma(188;0.0075)|all_neural(188;0.0577)|Breast(177;0.086)		Epithelial(150;4.77e-12)|BRCA - Breast invasive adenocarcinoma(625;0.00435)|LUSC - Lung squamous cell carcinoma(625;0.19)		CTTGTTGGTGCCGCCCCTTAT	0.458			NA											21	123					0	0	0.000295444	0	0
AHNAK	79026	broad.mit.edu	37	11	62295599	62295599	+	Missense_Mutation	SNP	T	T	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr11:62295599T>C	uc001ntl.2	-	5	6590	c.6290A>G	c.(6289-6291)GAA>GGA	p.E2097G	AHNAK_uc001ntk.1_Intron	NM_001620	NP_001611	Q09666	AHNK_HUMAN	AHNAK nucleoprotein isoform 1	2097					nervous system development	nucleus	protein binding			ovary(10)|pancreas(4)|skin(4)|upper_aerodigestive_tract(1)	19		Melanoma(852;0.155)				CAGCTTCCCTTCTGGACCTTC	0.532			NA											5	329					0	0	0.000602214	0	0
KCNH3	23416	broad.mit.edu	37	12	49950989	49950989	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr12:49950989C>T	uc001ruh.1	+	14	2859	c.2599C>T	c.(2599-2601)CAT>TAT	p.H867Y	KCNH3_uc010smj.1_Missense_Mutation_p.H807Y	NM_012284	NP_036416	Q9ULD8	KCNH3_HUMAN	potassium voltage-gated channel, subfamily H	867	Cytoplasmic (Potential).				regulation of transcription, DNA-dependent	integral to membrane	two-component sensor activity|voltage-gated potassium channel activity				0						CACTGTTCCCCATGGGCCCAG	0.627			NA											17	49					0	0	0.000566183	0	0
SLC17A8	246213	broad.mit.edu	37	12	100811839	100811839	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr12:100811839C>T	uc010svi.1	+	11	1643	c.1330C>T	c.(1330-1332)CGC>TGC	p.R444C	SLC17A8_uc009ztx.2_Missense_Mutation_p.R394C	NM_139319	NP_647480	Q8NDX2	VGLU3_HUMAN	solute carrier family 17 (sodium-dependent	444	Cytoplasmic (Potential).				neurotransmitter transport|sensory perception of sound|sodium ion transport	cell junction|integral to membrane|synaptic vesicle membrane|synaptosome	L-glutamate transmembrane transporter activity|symporter activity			ovary(3)	3						CATTGCCCCACGCTATGCCAG	0.458			NA											9	120					0	0	0.000978159	0	0
SACS	26278	broad.mit.edu	37	13	23910594	23910594	+	Missense_Mutation	SNP	A	A	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr13:23910594A>T	uc001uon.2	-	10	8010	c.7421T>A	c.(7420-7422)ATA>AAA	p.I2474K	SACS_uc001uoo.2_Missense_Mutation_p.I2327K|SACS_uc001uop.1_Intron|SACS_uc001uoq.1_Intron	NM_014363	NP_055178	Q9NZJ4	SACS_HUMAN	sacsin	2474					cell death|negative regulation of inclusion body assembly|protein folding	axon|cell body fiber|dendrite|mitochondrion|nucleus	ATP binding|chaperone binding|Hsp70 protein binding|proteasome binding			ovary(7)|skin(2)|upper_aerodigestive_tract(1)|large_intestine(1)|pancreas(1)	12		all_cancers(29;1.51e-22)|all_epithelial(30;7.82e-19)|all_lung(29;4.71e-18)|Lung SC(185;0.0225)|Breast(139;0.128)		all cancers(112;0.00197)|Epithelial(112;0.00854)|OV - Ovarian serous cystadenocarcinoma(117;0.0298)|Lung(94;0.189)		CTTTACTTTTATCCAAGGGCA	0.378			NA											14	81					0	0	0.000219431	0	0
HCN4	10021	broad.mit.edu	37	15	73617439	73617439	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr15:73617439C>T	uc002avp.2	-	6	2829	c.1835G>A	c.(1834-1836)CGT>CAT	p.R612H		NM_005477	NP_005468	Q9Y3Q4	HCN4_HUMAN	hyperpolarization activated cyclic	612	Cytoplasmic (Potential).|cAMP.				blood circulation|muscle contraction	integral to membrane	cAMP binding|protein binding|sodium channel activity|voltage-gated potassium channel activity			ovary(5)|liver(1)	6				COAD - Colon adenocarcinoma(1;0.142)		GACCTCGAAACGCAGCTTGGT	0.552			NA											15	96					0	0	0.000566183	0	0
IL16	3603	broad.mit.edu	37	15	81575076	81575076	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr15:81575076C>T	uc002bgh.3	+	9	1554	c.1178C>T	c.(1177-1179)GCG>GTG	p.A393V	IL16_uc002bgc.2_RNA|IL16_uc010blq.1_Missense_Mutation_p.A393V|IL16_uc002bge.3_RNA|IL16_uc010unp.1_Missense_Mutation_p.A435V|IL16_uc002bgg.2_Missense_Mutation_p.A393V|IL16_uc002bgi.1_5'UTR	NM_172217	NP_757366	Q14005	IL16_HUMAN	interleukin 16 isoform 2	393	PDZ 2.|Interaction with GRIN2A.				immune response|interspecies interaction between organisms|regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|extracellular space|nucleus|plasma membrane	cytokine activity			ovary(2)|lung(1)|skin(1)	4						GGATCCGTGGCGCACCTGGAC	0.557			NA											23	228					0	0	0.000878237	0	0
PDILT	204474	broad.mit.edu	37	16	20384335	20384335	+	Missense_Mutation	SNP	T	T	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr16:20384335T>C	uc002dhc.1	-	6	1014	c.791A>G	c.(790-792)GAG>GGG	p.E264G		NM_174924	NP_777584	Q8N807	PDILT_HUMAN	protein disulfide isomerase-like, testis	264					cell differentiation|cell redox homeostasis|multicellular organismal development|spermatogenesis	endoplasmic reticulum	isomerase activity			large_intestine(1)	1						CTCACTGACCTCAGTGTTGTA	0.443			NA											6	98					0	0	0.00116845	0	0
WRAP53	55135	broad.mit.edu	37	17	7593016	7593016	+	Silent	SNP	A	A	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr17:7593016A>G	uc010vuh.1	+	4	794	c.639A>G	c.(637-639)GAA>GAG	p.E213E	WRAP53_uc010vui.1_Silent_p.E213E|WRAP53_uc002gip.2_Silent_p.E213E|WRAP53_uc002gir.2_Silent_p.E213E|WRAP53_uc002giq.2_RNA|WRAP53_uc010cnl.2_Silent_p.E180E|TP53_uc010cnh.1_5'Flank|TP53_uc010cni.1_5'Flank|TP53_uc002gim.2_5'Flank|TP53_uc002gij.2_5'Flank|TP53_uc002gin.2_5'Flank|TP53_uc002gio.2_5'Flank|TP53_uc010vug.1_5'Flank|TP53_uc010cnk.1_5'Flank	NM_001143990	NP_001137462	Q9BUR4	WAP53_HUMAN	WD repeat domain 79 isoform 2	213					positive regulation of telomerase activity|telomere formation via telomerase	Cajal body|cytoplasm|telomerase holoenzyme complex	protein binding|RNA binding				0						AATATGCAGAAATGGTAAGGA	0.463			NA											10	36					0	0	0.000442599	0	0
NSF	4905	broad.mit.edu	37	17	44788352	44788352	+	Missense_Mutation	SNP	T	T	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr17:44788352T>G	uc002iku.2	+	14	1598	c.1494T>G	c.(1492-1494)GAT>GAG	p.D498E	NSF_uc010wke.1_Missense_Mutation_p.D404E|NSF_uc010wkf.1_Missense_Mutation_p.D404E|NSF_uc010wkg.1_Missense_Mutation_p.D493E	NM_006178	NP_006169	P46459	NSF_HUMAN	vesicle-fusing ATPase	498					protein transport|synaptic transmission	cytosol	ATP binding|metal ion binding			ovary(1)	1		Melanoma(429;0.203)	BRCA - Breast invasive adenocarcinoma(9;0.0257)	BRCA - Breast invasive adenocarcinoma(366;0.241)		ACCAAGAAGATTATGCAAGTT	0.398	Ovarian(25;472 742 1472 36813 50223)		NA											5	79					0	0	0.000602214	0	0
DSC3	1825	broad.mit.edu	37	18	28604352	28604352	+	Silent	SNP	T	T	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr18:28604352T>G	uc002kwj.3	-	6	893	c.738A>C	c.(736-738)GCA>GCC	p.A246A	DSC3_uc002kwi.3_Silent_p.A246A	NM_001941	NP_001932	Q14574	DSC3_HUMAN	desmocollin 3 isoform Dsc3a preproprotein	246	Extracellular (Potential).|Cadherin 2.				homophilic cell adhesion|protein stabilization	desmosome|integral to membrane|membrane fraction	calcium ion binding|gamma-catenin binding			ovary(2)|skin(2)	4			OV - Ovarian serous cystadenocarcinoma(10;0.125)			AATTATAAATTGCTTCTGTGA	0.368			NA											6	33					0	0	0.000157383	0	0
UNC13A	23025	broad.mit.edu	37	19	17750669	17750669	+	Missense_Mutation	SNP	T	T	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr19:17750669T>C	uc002nhd.2	-	23	3100	c.3100A>G	c.(3100-3102)ATT>GTT	p.I1034V		NM_001080421	NP_001073890	Q9UPW8	UN13A_HUMAN	unc-13 homolog A	946					exocytosis|intracellular signal transduction	cell junction|cytoplasm|presynaptic membrane	metal ion binding			ovary(3)	3						GAGAGGTCAATCCGCAGGGAG	0.577			NA											12	49					0	0	0.000308642	0	0
PRODH2	58510	broad.mit.edu	37	19	36297459	36297459	+	Missense_Mutation	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr19:36297459G>A	uc002obx.1	-	8	1120	c.1102C>T	c.(1102-1104)CAC>TAC	p.H368Y		NM_021232	NP_067055	Q9UF12	PROD2_HUMAN	kidney and liver proline oxidase 1	368					glutamate biosynthetic process|proline catabolic process		proline dehydrogenase activity			ovary(2)	2	all_lung(56;2.87e-07)|Lung NSC(56;4.32e-07)|Esophageal squamous(110;0.162)		LUSC - Lung squamous cell carcinoma(66;0.0515)			CCGGCCCTGTGCGCAGCCTCT	0.637			NA											8	203					0	0	0.000274275	0	0
CD33	945	broad.mit.edu	37	19	51729239	51729239	+	Missense_Mutation	SNP	C	C	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr19:51729239C>G	uc002pwa.2	+	3	639	c.599C>G	c.(598-600)ACC>AGC	p.T200S	CD33_uc010eos.1_Missense_Mutation_p.T200S|CD33_uc010eot.1_Missense_Mutation_p.T73S|CD33_uc010eou.1_RNA	NM_001772	NP_001763	P20138	CD33_HUMAN	CD33 antigen isoform 1 precursor	200	Extracellular (Potential).|Ig-like C2-type.				cell adhesion|cell-cell signaling|negative regulation of cell proliferation	external side of plasma membrane|integral to plasma membrane	receptor activity|sugar binding				0		all_neural(266;0.0199)		GBM - Glioblastoma multiforme(134;0.000224)|OV - Ovarian serous cystadenocarcinoma(262;0.00468)	Gemtuzumab ozogamicin(DB00056)	CTCATAATCACCCCACGGCCC	0.617			NA											4	87					0	0	0.00024832	0	0
MTIF2	4528	broad.mit.edu	37	2	55481241	55481241	+	Missense_Mutation	SNP	A	A	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr2:55481241A>C	uc002ryn.2	-	8	1337	c.600T>G	c.(598-600)TTT>TTG	p.F200L	MTIF2_uc010yox.1_Intron|MTIF2_uc002ryo.2_Missense_Mutation_p.F200L	NM_001005369	NP_001005369	P46199	IF2M_HUMAN	mitochondrial translational initiation factor 2	200	G-domain.				regulation of translational initiation	mitochondrion	GTP binding|GTPase activity|ribosomal small subunit binding|translation initiation factor activity			ovary(1)	1						GAGTTTTTCGAAATTTGTCAA	0.453			NA											5	58					0	0	0.000602214	0	0
GLI2	2736	broad.mit.edu	37	2	121736058	121736058	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr2:121736058C>T	uc010flp.2	+	9	1447	c.1417C>T	c.(1417-1419)CGC>TGC	p.R473C	GLI2_uc002tmq.1_Missense_Mutation_p.R145C|GLI2_uc002tmr.1_Missense_Mutation_p.R128C|GLI2_uc002tmt.3_Missense_Mutation_p.R145C|GLI2_uc002tmu.3_Missense_Mutation_p.R128C|GLI2_uc002tmw.1_Missense_Mutation_p.R456C	NM_005270	NP_005261	P10070	GLI2_HUMAN	GLI-Kruppel family member GLI2	473					axon guidance|branching morphogenesis of a tube|cell proliferation|cerebellar cortex morphogenesis|developmental growth|embryonic digestive tract development|epidermal cell differentiation|floor plate formation|heart development|hindgut morphogenesis|kidney development|lung development|negative regulation of transcription from RNA polymerase II promoter|odontogenesis of dentine-containing tooth|osteoblast development|osteoblast differentiation|pituitary gland development|positive regulation of DNA replication|positive regulation of T cell differentiation in thymus|positive regulation of transcription from RNA polymerase II promoter|proximal/distal pattern formation|skeletal system development|smoothened signaling pathway involved in ventral spinal cord interneuron specification|spinal cord ventral commissure morphogenesis	nucleus|nucleus	protein binding|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|zinc ion binding			ovary(8)|lung(2)|breast(1)|central_nervous_system(1)|pancreas(1)	13	Renal(3;0.0496)	Prostate(154;0.0623)				GTTTGTGTGCCGCTGGCAGGC	0.627			NA											7	184					0	0	0.000978159	0	0
TTN	7273	broad.mit.edu	37	2	179459289	179459289	+	Missense_Mutation	SNP	T	T	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr2:179459289T>C	uc010zfg.1	-	245	50452	c.50228A>G	c.(50227-50229)GAT>GGT	p.D16743G	uc002umo.2_Intron|uc002ump.1_Intron|TTN_uc010zfh.1_Missense_Mutation_p.D10438G|TTN_uc010zfi.1_Missense_Mutation_p.D10371G|TTN_uc010zfj.1_Missense_Mutation_p.D10246G	NM_133378	NP_596869	Q8WZ42	TITIN_HUMAN	titin isoform N2-A	17670							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			ovary(58)|stomach(19)|large_intestine(17)|lung(16)|skin(16)|breast(10)|pancreas(7)|kidney(4)|central_nervous_system(3)|urinary_tract(2)|upper_aerodigestive_tract(1)	153			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			TGACCCACCATCATACTTAGG	0.388			NA											3	116					0	0	6.4e-05	0	0
GIGYF2	26058	broad.mit.edu	37	2	233715054	233715054	+	Missense_Mutation	SNP	A	A	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr2:233715054A>G	uc002vti.3	+	30	4104	c.3767A>G	c.(3766-3768)GAG>GGG	p.E1256G	GIGYF2_uc002vtj.3_Missense_Mutation_p.E1277G|GIGYF2_uc002vtk.3_Missense_Mutation_p.E1256G|GIGYF2_uc002vth.3_Missense_Mutation_p.E1250G|GIGYF2_uc010zmk.1_RNA|GIGYF2_uc002vtq.3_Missense_Mutation_p.E589G	NM_015575	NP_056390	Q6Y7W6	PERQ2_HUMAN	GRB10 interacting GYF protein 2 isoform b	1256					cell death		protein binding			ovary(4)|central_nervous_system(3)	7		Breast(86;0.00279)|all_hematologic(139;0.00793)|Renal(207;0.0112)|Acute lymphoblastic leukemia(138;0.0182)|all_lung(227;0.0271)|Lung NSC(271;0.0839)		Epithelial(121;7.37e-16)|BRCA - Breast invasive adenocarcinoma(100;0.000472)|LUSC - Lung squamous cell carcinoma(224;0.00902)|Lung(119;0.0118)|GBM - Glioblastoma multiforme(43;0.0145)		TCCAATTTTGAGGCTGTGCAG	0.463			NA											3	70					0	0	0.00024832	0	0
FRG1B	284802	broad.mit.edu	37	20	29625905	29625905	+	Missense_Mutation	SNP	T	T	C	rs137871677	by1000genomes	TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr20:29625905T>C	uc010ztl.1	+	2	91	c.59T>C	c.(58-60)CTT>CCT	p.L20P	FRG1B_uc002wvm.1_RNA|FRG1B_uc010ztj.1_RNA|FRG1B_uc010gdr.1_RNA|FRG1B_uc010ztk.1_Intron					Homo sapiens cDNA FLJ32537 fis, clone SMINT2000400, highly similar to Homo sapiens FRG1 mRNA.												0						GGAAAATATCTTGGTATAAAT	0.333			NA											6	67					0	0	8.12818e-05	0	0
BPIL1	80341	broad.mit.edu	37	20	31604887	31604887	+	Missense_Mutation	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr20:31604887G>A	uc002wyj.2	+	7	750	c.556G>A	c.(556-558)GTC>ATC	p.V186I		NM_025227	NP_079503	Q8N4F0	BPIL1_HUMAN	bactericidal/permeability-increasing	186						extracellular region	lipid binding			skin(2)|large_intestine(1)|ovary(1)	4						GGGTGTCAATGTCCACCTGGG	0.622			NA											27	125					0	0	0.00106085	0	0
POTEH	23784	broad.mit.edu	37	22	16287673	16287673	+	Missense_Mutation	SNP	C	C	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr22:16287673C>G	uc010gqp.2	-	1	265	c.213G>C	c.(211-213)TGG>TGC	p.W71C	POTEH_uc002zlg.1_5'Flank|POTEH_uc002zlh.1_5'Flank|POTEH_uc002zlj.1_5'UTR	NM_001136213	NP_001129685	Q6S545	POTEH_HUMAN	ANKRD26-like family C, member 3	71										skin(1)	1						TCCCCCTGCACCAGGGGAAGC	0.582			NA											5	560					0	0	0.000602214	0	0
LZTR1	8216	broad.mit.edu	37	22	21340175	21340175	+	Silent	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr22:21340175C>T	uc002zto.2	+	3	412	c.309C>T	c.(307-309)TGC>TGT	p.C103C	LZTR1_uc002ztn.2_Silent_p.C62C|LZTR1_uc011ahy.1_Intron|LZTR1_uc010gsr.1_5'Flank	NM_006767	NP_006758	Q8N653	LZTR1_HUMAN	leucine-zipper-like transcription regulator 1	103	Kelch 1.				anatomical structure morphogenesis		sequence-specific DNA binding transcription factor activity			ovary(2)|lung(2)	4	all_cancers(11;1.83e-25)|all_epithelial(7;9.19e-23)|Lung NSC(8;3.06e-15)|all_lung(8;5.05e-14)|Melanoma(16;0.000465)|Ovarian(15;0.0028)|Colorectal(54;0.0332)|all_neural(72;0.142)	Lung SC(17;0.0262)	LUSC - Lung squamous cell carcinoma(15;0.000204)|Lung(15;0.00494)|Epithelial(17;0.195)			TGAAAGACTGCTCCTGGTGCA	0.592			NA											8	45					0	0	0.000442599	0	0
PKDREJ	10343	broad.mit.edu	37	22	46658152	46658152	+	Silent	SNP	C	C	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr22:46658152C>G	uc003bhh.2	-	1	1068	c.1068G>C	c.(1066-1068)CTG>CTC	p.L356L		NM_006071	NP_006062	Q9NTG1	PKDRE_HUMAN	receptor for egg jelly-like protein precursor	356	Extracellular (Potential).|REJ.				acrosome reaction|neuropeptide signaling pathway	integral to membrane	calcium ion binding|ion channel activity			breast(3)|ovary(2)	5		Ovarian(80;0.00965)|all_neural(38;0.0416)		UCEC - Uterine corpus endometrioid carcinoma (28;0.00459)		TGGACCCGTCCAGAATCAGCT	0.557			NA											17	104					0	0	0.000958276	0	0
SETD5	55209	broad.mit.edu	37	3	9477424	9477424	+	Missense_Mutation	SNP	G	G	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr3:9477424G>C	uc003brt.2	+	7	836	c.401G>C	c.(400-402)AGT>ACT	p.S134T	SETD5_uc003brs.1_Missense_Mutation_p.S115T|SETD5_uc003bru.2_Missense_Mutation_p.S23T|SETD5_uc003brv.2_Missense_Mutation_p.S23T	NM_001080517	NP_001073986	Q9C0A6	SETD5_HUMAN	SET domain containing 5	134										ovary(2)	2	Medulloblastoma(99;0.227)			OV - Ovarian serous cystadenocarcinoma(96;0.112)		GGGGATAGCAGTGCAACAGAA	0.423			NA											5	12					0	0	0.00116845	0	0
PIGG	54872	broad.mit.edu	37	4	502694	502694	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr4:502694C>T	uc003gak.3	+	5	972	c.836C>T	c.(835-837)GCC>GTC	p.A279V	PIGG_uc003gaj.3_Missense_Mutation_p.A279V|PIGG_uc011bux.1_RNA|PIGG_uc010ibf.2_Missense_Mutation_p.A146V|PIGG_uc003gal.3_Missense_Mutation_p.A190V|PIGG_uc003gai.2_RNA|PIGG_uc011buw.1_Missense_Mutation_p.A157V|PIGG_uc003gam.2_Missense_Mutation_p.A190V|PIGG_uc003gan.2_Missense_Mutation_p.A190V	NM_001127178	NP_001120650	Q5H8A4	PIGG_HUMAN	phosphatidylinositol glycan anchor biosynthesis,	279	Lumenal (Potential).				C-terminal protein lipidation|preassembly of GPI anchor in ER membrane	endoplasmic reticulum membrane|integral to membrane	CP2 mannose-ethanolamine phosphotransferase activity			central_nervous_system(2)|ovary(1)|skin(1)	4						AGTCACGGGGCCTCCTCCACC	0.443			NA											12	73					0	0	0.00136819	0	0
LETM1	3954	broad.mit.edu	37	4	1843351	1843351	+	Missense_Mutation	SNP	C	C	T	rs138076114		TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr4:1843351C>T	uc003gdv.2	-	3	614	c.317G>A	c.(316-318)CGT>CAT	p.R106H	LETM1_uc010icc.2_5'Flank|LETM1_uc011bvg.1_Missense_Mutation_p.R106H	NM_012318	NP_036450	O95202	LETM1_HUMAN	leucine zipper-EF-hand containing transmembrane	106					cristae formation	integral to membrane|mitochondrial inner membrane	calcium ion binding|protein binding			central_nervous_system(1)	1			all cancers(2;0.00756)|OV - Ovarian serous cystadenocarcinoma(23;0.00989)|Epithelial(3;0.0141)			GTGCCAGCCACGCACAGGAAG	0.597			NA											10	94					0	0	0.000673444	0	0
PHF15	23338	broad.mit.edu	37	5	133873705	133873705	+	Silent	SNP	A	A	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr5:133873705A>C	uc003kzo.1	+	3	264	c.85A>C	c.(85-87)AGA>CGA	p.R29R	PHF15_uc011cxt.1_Silent_p.R29R|PHF15_uc003kzk.2_Silent_p.R45R|PHF15_uc003kzl.2_Silent_p.R29R|PHF15_uc003kzm.2_Silent_p.R29R|PHF15_uc003kzn.2_Silent_p.R29R	NM_015288	NP_056103	Q9NQC1	JADE2_HUMAN	PHD finger protein 15	29					histone H3 acetylation|histone H4-K12 acetylation|histone H4-K5 acetylation|histone H4-K8 acetylation	histone acetyltransferase complex	zinc ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.0186)|Kidney(363;0.0365)			ATCCGCATCAAGATGCTCCAA	0.537			NA											10	66					0	0	0.000673444	0	0
SLIT3	6586	broad.mit.edu	37	5	168134994	168134994	+	Missense_Mutation	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr5:168134994G>A	uc003mab.2	-	26	3251	c.2831C>T	c.(2830-2832)CCC>CTC	p.P944L	SLIT3_uc010jjg.2_Missense_Mutation_p.P951L	NM_003062	NP_003053	O75094	SLIT3_HUMAN	slit homolog 3 precursor	944	EGF-like 1.				apoptosis involved in luteolysis|axon extension involved in axon guidance|cellular response to hormone stimulus|negative chemotaxis|negative regulation of cell growth|negative regulation of chemokine-mediated signaling pathway|response to cortisol stimulus|Roundabout signaling pathway	extracellular space|mitochondrion	calcium ion binding|Roundabout binding			ovary(3)|skin(1)	4	Renal(175;0.000159)|Lung NSC(126;0.0174)|all_lung(126;0.0392)	Medulloblastoma(196;0.0399)|all_neural(177;0.0966)	Kidney(164;7.53e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)			GTAGCTGTAGGGGCAGGCACA	0.612	Ovarian(29;311 847 10864 17279 24903)		NA											7	45					0	0	0.000157383	0	0
TBC1D9B	23061	broad.mit.edu	37	5	179321595	179321595	+	Missense_Mutation	SNP	T	T	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr5:179321595T>C	uc003mlh.2	-	4	405	c.368A>G	c.(367-369)AAC>AGC	p.N123S	TBC1D9B_uc003mli.2_Missense_Mutation_p.N123S|TBC1D9B_uc003mlj.2_Missense_Mutation_p.N123S	NM_198868	NP_942568	Q66K14	TBC9B_HUMAN	TBC1 domain family, member 9B (with GRAM domain)	123						integral to membrane|intracellular	calcium ion binding|Rab GTPase activator activity			breast(1)|skin(1)	2	all_cancers(89;0.000197)|all_epithelial(37;6.84e-05)|Renal(175;0.000159)|Lung NSC(126;0.00136)|all_lung(126;0.00243)	all_cancers(40;0.0236)|Medulloblastoma(196;0.00498)|all_neural(177;0.0138)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			CAGGTTCTTGTTCTCTTCTGC	0.602			NA											4	64					0	0	0.000602214	0	0
ZFP57	346171	broad.mit.edu	37	6	29640722	29640722	+	Missense_Mutation	SNP	C	C	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr6:29640722C>A	uc011dlw.1	-	4	1317	c.1166G>T	c.(1165-1167)TGT>TTT	p.C389F	ZFP57_uc003nnl.3_Missense_Mutation_p.C369F	NM_001109809	NP_001103279	Q9NU63	ZFP57_HUMAN	zinc finger protein 57 homolog	305	C2H2-type 5.				DNA methylation involved in embryo development|regulation of gene expression by genetic imprinting|transcription, DNA-dependent		DNA binding|zinc ion binding			ovary(3)|skin(2)	5						AGTCAAAGAACAATGGGGGCA	0.517			NA											79	278					1.7488e-33	9.98404e-33	0.000781405	1	0
GPR6	2830	broad.mit.edu	37	6	110300677	110300677	+	Missense_Mutation	SNP	C	C	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr6:110300677C>T	uc011eaw.1	+	2	542	c.362C>T	c.(361-363)GCG>GTG	p.A121V	GPR6_uc011eav.1_Missense_Mutation_p.A136V|GPR6_uc003ptu.2_Missense_Mutation_p.A121V	NM_005284	NP_005275	P46095	GPR6_HUMAN	G protein-coupled receptor 6	121	Helical; Name=2; (Potential).					integral to plasma membrane					0		all_cancers(87;1.64e-05)|Acute lymphoblastic leukemia(125;2.66e-08)|all_hematologic(75;1.13e-06)|all_epithelial(87;2.83e-05)|all_lung(197;0.00016)|Lung NSC(302;0.000318)|Colorectal(196;0.0488)		BRCA - Breast invasive adenocarcinoma(108;8.01e-05)|Epithelial(106;8.76e-05)|all cancers(137;0.000197)|OV - Ovarian serous cystadenocarcinoma(136;0.0307)		GACCTGTTGGCGGGCTGTGGC	0.652			NA											30	116					0	0	0.00178596	0	0
SEMA3E	9723	broad.mit.edu	37	7	83119449	83119449	+	Missense_Mutation	SNP	A	A	T			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr7:83119449A>T	uc003uhy.1	-	2	723	c.257T>A	c.(256-258)ATC>AAC	p.I86N		NM_012431	NP_036563	O15041	SEM3E_HUMAN	semaphorin 3E precursor	86	Sema.				axon guidance	extracellular space|membrane	receptor activity			ovary(3)	3		Medulloblastoma(109;0.109)				GCCGTCACTGATTCTCTCCAA	0.388			NA											3	19					0	0	0.00024832	0	0
ZNF212	7988	broad.mit.edu	37	7	148947288	148947288	+	Silent	SNP	C	C	G			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr7:148947288C>G	uc003wfp.2	+	2	159	c.63C>G	c.(61-63)TCC>TCG	p.S21S		NM_012256	NP_036388	Q9UDV6	ZN212_HUMAN	zinc finger protein 212	21					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|identical protein binding|zinc ion binding			ovary(1)	1	Melanoma(164;0.15)		OV - Ovarian serous cystadenocarcinoma(82;0.00171)			TAACTTCTTCCACACTTCCTT	0.458			NA											8	75					0	0	0.000157383	0	0
ASB10	136371	broad.mit.edu	37	7	150878359	150878359	+	Silent	SNP	G	G	A			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr7:150878359G>A	uc003wjm.1	-	3	1032	c.906C>T	c.(904-906)GAC>GAT	p.D302D	ASB10_uc003wjl.1_Silent_p.D302D|ASB10_uc003wjn.1_Silent_p.D242D	NM_001142459	NP_001135931	Q8WXI3	ASB10_HUMAN	ankyrin repeat and SOCS box-containing 10	257	ANK 5.				intracellular signal transduction						0			OV - Ovarian serous cystadenocarcinoma(82;0.00448)	UCEC - Uterine corpus endometrioid carcinoma (81;0.168)		GGCAGCGGACGTCACAGGCAG	0.652			NA											6	35					0	0	8.12818e-05	0	0
KCNB2	9312	broad.mit.edu	37	8	73848601	73848601	+	Missense_Mutation	SNP	G	G	C			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr8:73848601G>C	uc003xzb.2	+	3	1599	c.1011G>C	c.(1009-1011)TTG>TTC	p.L337F		NM_004770	NP_004761	Q92953	KCNB2_HUMAN	potassium voltage-gated channel, Shab-related	337	Helical; Name=Segment S5; (Potential).				regulation of smooth muscle contraction	voltage-gated potassium channel complex	delayed rectifier potassium channel activity|protein binding			skin(3)|large_intestine(1)|pancreas(1)|ovary(1)|central_nervous_system(1)	7	Breast(64;0.137)		Epithelial(68;0.105)			AATTGGGCTTGTTGATATTGT	0.473			NA											7	136					0	0	8.12818e-05	0	0
A1CF	29974	broad.mit.edu	37	10	52573648	52573648	+	Frame_Shift_Del	DEL	A	A	-	rs140399088		TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr10:52573648delA	uc001jjj.2	-	10	1504	c.1316delT	c.(1315-1317)TTAfs	p.L439fs	A1CF_uc010qhn.1_Frame_Shift_Del_p.L439fs|A1CF_uc001jji.2_Frame_Shift_Del_p.L431fs|A1CF_uc001jjh.2_Frame_Shift_Del_p.L439fs|A1CF_uc010qho.1_Frame_Shift_Del_p.L447fs|A1CF_uc009xov.2_Frame_Shift_Del_p.L431fs	NM_138932	NP_620310	Q9NQ94	A1CF_HUMAN	apobec-1 complementation factor isoform 2	439					cytidine to uridine editing|mRNA modification|mRNA processing|protein stabilization	apolipoprotein B mRNA editing enzyme complex|endoplasmic reticulum|nucleoplasm	nucleotide binding|protein binding|single-stranded RNA binding			central_nervous_system(1)	1						TTGGGGTTTTAATGTGACAGG	0.418			NA											19	106	---	---	---	---	NA	NA	NA	NA	NA
SPON1	10418	broad.mit.edu	37	11	14276276	14276277	+	Splice_Site	DEL	GT	GT	-			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	GT	GT	-	-	GT	GT	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr11:14276276_14276277delGT	uc001mle.2	+	9	1630	c.1092_splice	c.e9+1	p.E364_splice		NM_006108	NP_006099	Q9HCB6	SPON1_HUMAN	spondin 1, extracellular matrix protein						cell adhesion	extracellular space|proteinaceous extracellular matrix	protein binding				0				Epithelial(150;0.00898)		GACCTATGAGGTGTGTGTGTGT	0.594			NA											7	64	---	---	---	---	NA	NA	NA	NA	NA
CTCFL	140690	broad.mit.edu	37	20	56099187	56099187	+	Frame_Shift_Del	DEL	T	T	-			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr20:56099187delT	uc010gix.1	-	1	737	c.75delA	c.(73-75)AAAfs	p.K25fs	CTCFL_uc010giw.1_Frame_Shift_Del_p.K25fs|CTCFL_uc002xym.2_Frame_Shift_Del_p.K25fs|CTCFL_uc010giz.1_Intron|CTCFL_uc010giy.1_Intron|CTCFL_uc010gja.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjb.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjc.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjd.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gje.2_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjf.2_Intron|CTCFL_uc010gjg.2_Intron|CTCFL_uc010gjh.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gji.1_Intron|CTCFL_uc010gjj.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjk.1_Frame_Shift_Del_p.K25fs|CTCFL_uc010gjl.1_Frame_Shift_Del_p.K25fs	NM_080618	NP_542185	Q8NI51	CTCFL_HUMAN	CCCTC-binding factor-like protein	25					cell cycle|DNA methylation involved in gamete generation|histone methylation|positive regulation of transcription, DNA-dependent|regulation of gene expression by genetic imprinting|regulation of histone H3-K4 methylation|transcription, DNA-dependent	cytoplasm|nucleus	histone binding|sequence-specific DNA binding|transcription regulatory region DNA binding|zinc ion binding			ovary(2)|large_intestine(1)|skin(1)	4	Lung NSC(12;0.00132)|all_lung(29;0.00433)|Melanoma(10;0.242)		BRCA - Breast invasive adenocarcinoma(13;3.95e-12)|Epithelial(14;3.41e-08)|all cancers(14;2.09e-07)			CCTTCAGGCCTTTTTCCGGCA	0.502			NA											9	505	---	---	---	---	NA	NA	NA	NA	NA
FAT2	2196	broad.mit.edu	37	5	150947463	150947463	+	Frame_Shift_Del	DEL	A	A	-			TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr5:150947463delA	uc003lue.3	-	1	1043	c.1030delT	c.(1030-1032)TATfs	p.Y344fs	GM2A_uc011dcs.1_Intron|FAT2_uc010jhx.1_Frame_Shift_Del_p.Y344fs	NM_001447	NP_001438	Q9NYQ8	FAT2_HUMAN	FAT tumor suppressor 2 precursor	344	Extracellular (Potential).				epithelial cell migration|homophilic cell adhesion	cell-cell adherens junction|integral to membrane|nucleus	calcium ion binding			ovary(4)|upper_aerodigestive_tract(1)|skin(1)	6		Medulloblastoma(196;0.0912)|all_hematologic(541;0.104)	KIRC - Kidney renal clear cell carcinoma(527;0.000785)|Kidney(363;0.00101)			ATCTGGGAATAAAAATAAGGG	0.498			NA											19	189	---	---	---	---	NA	NA	NA	NA	NA
ZNF395	55893	broad.mit.edu	37	8	28209226	28209228	+	In_Frame_Del	DEL	GCA	GCA	-	rs142343457	byFrequency	TCGA-55-6978-01A-11D-1945-08	TCGA-55-6978-11A-01D-1945-08	GCA	GCA	-	-	GCA	GCA	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	d44bbc31-efda-4b1d-804f-9dc9ba1684ee	bef20a84-615a-481d-a608-fe9071ab24e7	g.chr8:28209226_28209228delGCA	uc003xgq.2	-	7	1105_1107	c.1017_1019delTGC	c.(1015-1020)GCTGCC>GCC	p.339_340AA>A	ZNF395_uc003xgt.2_In_Frame_Del_p.339_340AA>A|ZNF395_uc003xgr.2_In_Frame_Del_p.339_340AA>A|ZNF395_uc003xgs.2_In_Frame_Del_p.339_340AA>A	NM_018660	NP_061130	Q9H8N7	ZN395_HUMAN	zinc finger protein 395	339_340					transcription, DNA-dependent	cytoplasm|nucleus	DNA binding|zinc ion binding				0		Ovarian(32;2.06e-05)		KIRC - Kidney renal clear cell carcinoma(542;0.102)|Kidney(114;0.123)|Colorectal(74;0.142)		GGTGCCTgcggcagcagcagcag	0.507			NA											7	167	---	---	---	---	NA	NA	NA	NA	NA
