Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	ACHILLES_Top_Genes	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_status	validation_method	validation_tumor_sample	validation_alt_allele	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
LRRC47	57470	broad.mit.edu	37	1	3701699	3701699	+	Silent	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:3701699G>T	uc001akx.1	-	3	1174	c.1146C>A	c.(1144-1146)GCC>GCA	p.A382A		NM_020710	NP_065761	Q8N1G4	LRC47_HUMAN	leucine rich repeat containing 47	382					translation		phenylalanine-tRNA ligase activity|RNA binding			large_intestine(1)|ovary(1)	2	all_cancers(77;0.0375)|Ovarian(185;0.0634)|all_lung(157;0.208)|Lung NSC(156;0.21)	all_epithelial(116;1.34e-16)|all_lung(118;2.53e-06)|Lung NSC(185;0.00028)|Renal(390;0.00357)|Breast(487;0.00446)|Hepatocellular(190;0.0218)|Myeloproliferative disorder(586;0.0393)|Lung SC(97;0.0743)|Ovarian(437;0.127)		Epithelial(90;5.49e-39)|OV - Ovarian serous cystadenocarcinoma(86;1.43e-22)|GBM - Glioblastoma multiforme(42;3.69e-16)|Colorectal(212;1.21e-05)|COAD - Colon adenocarcinoma(227;5.87e-05)|Kidney(185;0.000367)|BRCA - Breast invasive adenocarcinoma(365;0.000704)|KIRC - Kidney renal clear cell carcinoma(229;0.00567)|STAD - Stomach adenocarcinoma(132;0.00645)|Lung(427;0.124)		GCCCTTTGACGGCACGGAGCT	0.597			NA											6	52					2.0095e-06	2.47511e-06	0.001984	1	0
ACOT7	11332	broad.mit.edu	37	1	6324699	6324699	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:6324699C>T	uc001ams.2	-	9	1258	c.1101G>A	c.(1099-1101)CAG>CAA	p.Q367Q	ACOT7_uc010nzq.1_Silent_p.Q252Q|ACOT7_uc001amt.2_Silent_p.Q357Q|ACOT7_uc001amu.2_RNA|ACOT7_uc001amv.2_RNA|ACOT7_uc001amq.2_Silent_p.Q316Q|ACOT7_uc001amr.2_Silent_p.Q337Q	NM_181864	NP_863654	O00154	BACH_HUMAN	acyl-CoA thioesterase 7 isoform hBACHb	367						mitochondrion|nucleus	carboxylesterase activity|fatty-acyl-CoA binding|palmitoyl-CoA hydrolase activity				0	Ovarian(185;0.0634)|all_lung(157;0.175)	all_cancers(23;1.42e-38)|all_epithelial(116;3.96e-23)|all_lung(118;3.69e-08)|Lung NSC(185;8.52e-07)|all_hematologic(16;6.92e-06)|Colorectal(325;4.53e-05)|Acute lymphoblastic leukemia(12;5e-05)|all_neural(13;0.000164)|Breast(487;0.000688)|Renal(390;0.0007)|Hepatocellular(190;0.00308)|Myeloproliferative disorder(586;0.0255)|Ovarian(437;0.0393)|Medulloblastoma(700;0.211)		Epithelial(90;9.16e-37)|GBM - Glioblastoma multiforme(13;5.89e-29)|OV - Ovarian serous cystadenocarcinoma(86;7.63e-19)|Colorectal(212;1.27e-07)|COAD - Colon adenocarcinoma(227;2.06e-05)|Kidney(185;7.74e-05)|KIRC - Kidney renal clear cell carcinoma(229;0.00129)|BRCA - Breast invasive adenocarcinoma(365;0.00132)|STAD - Stomach adenocarcinoma(132;0.00195)|READ - Rectum adenocarcinoma(331;0.0481)		TCGCCTTCATCTGCAGGTACC	0.627	GBM(74;673 1226 4974 11850 13190)		NA											3	29					0	0	0.004672	0	0
RSC1A1	6248	broad.mit.edu	37	1	15988127	15988127	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:15988127G>T	uc010obn.1	+	1	1764	c.1764G>T	c.(1762-1764)CAG>CAT	p.Q588H		NM_006511	NP_006502	Q92681	RSCA1_HUMAN	regulatory solute carrier protein, family 1,	588	UBA.				negative regulation of transport|regulation of transcription, DNA-dependent|transcription, DNA-dependent|transport	cell junction|Golgi apparatus|nucleus	ion channel inhibitor activity			ovary(1)	1		Colorectal(325;0.00108)|Renal(390;0.00145)|Breast(348;0.00276)|Lung NSC(340;0.00566)|all_lung(284;0.00831)|Myeloproliferative disorder(586;0.0393)|Ovarian(437;0.0798)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0228)|Colorectal(212;5.73e-07)|COAD - Colon adenocarcinoma(227;3.49e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000114)|KIRC - Kidney renal clear cell carcinoma(229;0.00244)|STAD - Stomach adenocarcinoma(313;0.0072)|READ - Rectum adenocarcinoma(331;0.0649)		TTACTTTGCAGGAAGCTCTTG	0.473			NA											26	92					3.73148e-12	4.95894e-12	0.007291	1	0
SPEN	23013	broad.mit.edu	37	1	16264106	16264106	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:16264106C>A	uc001axk.1	+	12	10679	c.10475C>A	c.(10474-10476)TCC>TAC	p.S3492Y	SPEN_uc010obp.1_Missense_Mutation_p.S3451Y	NM_015001	NP_055816	Q96T58	MINT_HUMAN	spen homolog, transcriptional regulator	3492					interspecies interaction between organisms|negative regulation of transcription, DNA-dependent|Notch signaling pathway	nucleus	nucleotide binding|protein binding|RNA binding			ovary(6)|breast(3)|lung(2)|skin(2)|upper_aerodigestive_tract(1)|central_nervous_system(1)	15		Colorectal(325;0.000258)|Breast(348;0.000278)|Lung NSC(340;0.000419)|Renal(390;0.000518)|all_lung(284;0.000567)|Ovarian(437;0.0129)|Myeloproliferative disorder(586;0.0255)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0185)|Colorectal(212;5.96e-07)|COAD - Colon adenocarcinoma(227;3.11e-05)|BRCA - Breast invasive adenocarcinoma(304;0.000115)|Kidney(64;0.000212)|KIRC - Kidney renal clear cell carcinoma(64;0.003)|STAD - Stomach adenocarcinoma(313;0.013)|READ - Rectum adenocarcinoma(331;0.0681)		CACCTGACTTCCCAGAGACCC	0.547			NA											9	89					7.48243e-07	9.2727e-07	0.006214	1	0
MST1P9	11223	broad.mit.edu	37	1	17087593	17087593	+	Silent	SNP	C	C	T	rs12145944	by1000genomes	TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:17087593C>T	uc010ock.1	-	2	72	c.72G>A	c.(70-72)CAG>CAA	p.Q24Q	CROCC_uc009voy.1_Intron|MST1P9_uc001azp.3_5'Flank	NR_002729				SubName: Full=Hepatocyte growth factor-like protein homolog;												0						ATGGCGAGCGCTGCCCTGCAG	0.577			NA											3	34					0	0	0.004672	0	0
PIGV	55650	broad.mit.edu	37	1	27124066	27124066	+	Missense_Mutation	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:27124066T>C	uc001bmz.2	+	4	1544	c.1213T>C	c.(1213-1215)TTT>CTT	p.F405L	PIGV_uc001bmy.2_Missense_Mutation_p.F170L|PIGV_uc009vso.2_Missense_Mutation_p.V398A|PIGV_uc010ofg.1_Missense_Mutation_p.F170L|PIGV_uc001bna.2_Missense_Mutation_p.F405L	NM_017837	NP_060307	Q9NUD9	PIGV_HUMAN	phosphatidylinositol glycan class V	405	Lumenal (Potential).				C-terminal protein lipidation|preassembly of GPI anchor in ER membrane	endoplasmic reticulum membrane|integral to membrane	glycolipid mannosyltransferase activity			ovary(1)	1		all_cancers(24;3.93e-26)|all_epithelial(13;3.96e-23)|Colorectal(325;3.46e-05)|all_lung(284;5.94e-05)|Lung NSC(340;7.26e-05)|Breast(348;9.7e-05)|Renal(390;0.0007)|Ovarian(437;0.00764)|Myeloproliferative disorder(586;0.0255)|all_neural(195;0.0381)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0178)|all cancers(4;2.26e-54)|Epithelial(14;2.85e-53)|OV - Ovarian serous cystadenocarcinoma(117;1.91e-30)|Colorectal(126;1.31e-09)|COAD - Colon adenocarcinoma(152;3.45e-07)|BRCA - Breast invasive adenocarcinoma(304;0.000504)|STAD - Stomach adenocarcinoma(196;0.000588)|KIRC - Kidney renal clear cell carcinoma(1967;0.000716)|GBM - Glioblastoma multiforme(114;0.0222)|READ - Rectum adenocarcinoma(331;0.0419)|Lung(427;0.153)|LUSC - Lung squamous cell carcinoma(448;0.227)		TCTCACCAGGTTTTTGGGCTC	0.488			NA											9	136					0	0	0.004482	0	0
GPATCH3	63906	broad.mit.edu	37	1	27224092	27224092	+	Missense_Mutation	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:27224092T>A	uc001bne.2	-	2	605	c.576A>T	c.(574-576)AGA>AGT	p.R192S	GPATCH3_uc009vsp.1_Missense_Mutation_p.R3S	NM_022078	NP_071361	Q96I76	GPTC3_HUMAN	G patch domain containing 3	192						intracellular	nucleic acid binding				0		all_cancers(24;1.29e-21)|all_epithelial(13;2.35e-19)|Colorectal(325;0.000147)|all_lung(284;0.00122)|Lung NSC(340;0.00128)|Breast(348;0.00131)|Renal(390;0.00211)|Myeloproliferative disorder(586;0.0393)|Ovarian(437;0.0707)|all_neural(195;0.0966)		UCEC - Uterine corpus endometrioid carcinoma (279;0.0178)|Epithelial(14;3.97e-51)|OV - Ovarian serous cystadenocarcinoma(117;9.55e-30)|Colorectal(126;5.31e-09)|COAD - Colon adenocarcinoma(152;9.31e-07)|BRCA - Breast invasive adenocarcinoma(304;0.000513)|STAD - Stomach adenocarcinoma(196;0.000595)|KIRC - Kidney renal clear cell carcinoma(1967;0.00072)|READ - Rectum adenocarcinoma(331;0.0419)		CCACATTCCCTCTGGGCATCA	0.607			NA											10	49					0	0	0.008291	0	0
MACF1	23499	broad.mit.edu	37	1	39798795	39798795	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:39798795G>C	uc010oiu.1	+	1	1986	c.1855G>C	c.(1855-1857)GAG>CAG	p.E619Q	MACF1_uc010ois.1_Intron|MACF1_uc001cda.1_Intron|MACF1_uc001cdc.1_Intron|MACF1_uc001cdb.1_Intron	NM_033044	NP_149033	Q9UPN3	MACF1_HUMAN	microfilament and actin filament cross-linker	2184					cell cycle arrest|Golgi to plasma membrane protein transport|positive regulation of Wnt receptor signaling pathway|regulation of epithelial cell migration|regulation of focal adhesion assembly|regulation of microtubule-based process|Wnt receptor signaling pathway|wound healing	Golgi apparatus|microtubule|ruffle membrane	actin filament binding|ATPase activity|calcium ion binding|microtubule binding			ovary(8)|breast(3)|central_nervous_system(3)|skin(2)	16	Lung NSC(20;5.57e-06)|Ovarian(52;0.00769)|Acute lymphoblastic leukemia(166;0.074)	Myeloproliferative disorder(586;0.0255)	OV - Ovarian serous cystadenocarcinoma(33;7.78e-19)|Epithelial(16;1.73e-17)|all cancers(16;2.49e-16)|LUSC - Lung squamous cell carcinoma(16;0.00146)|Lung(16;0.00204)			ACACACTCTTGAGACTGAATA	0.348			NA											6	72					0	0	0.001168	0	0
MACF1	23499	broad.mit.edu	37	1	39799732	39799732	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:39799732G>C	uc010oiu.1	+	1	2923	c.2792G>C	c.(2791-2793)AGA>ACA	p.R931T	MACF1_uc010ois.1_Intron|MACF1_uc001cda.1_Intron|MACF1_uc001cdc.1_Intron|MACF1_uc001cdb.1_Intron	NM_033044	NP_149033	Q9UPN3	MACF1_HUMAN	microfilament and actin filament cross-linker	2496					cell cycle arrest|Golgi to plasma membrane protein transport|positive regulation of Wnt receptor signaling pathway|regulation of epithelial cell migration|regulation of focal adhesion assembly|regulation of microtubule-based process|Wnt receptor signaling pathway|wound healing	Golgi apparatus|microtubule|ruffle membrane	actin filament binding|ATPase activity|calcium ion binding|microtubule binding			ovary(8)|breast(3)|central_nervous_system(3)|skin(2)	16	Lung NSC(20;5.57e-06)|Ovarian(52;0.00769)|Acute lymphoblastic leukemia(166;0.074)	Myeloproliferative disorder(586;0.0255)	OV - Ovarian serous cystadenocarcinoma(33;7.78e-19)|Epithelial(16;1.73e-17)|all cancers(16;2.49e-16)|LUSC - Lung squamous cell carcinoma(16;0.00146)|Lung(16;0.00204)			CTTTTGGAGAGAGAGGAGGCC	0.403			NA											12	146					0	0	0.00245	0	0
TYW3	127253	broad.mit.edu	37	1	75199007	75199007	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:75199007G>T	uc001dgn.2	+	1	168	c.79G>T	c.(79-81)GAC>TAC	p.D27Y	CRYZ_uc001dgk.2_5'UTR|CRYZ_uc001dgj.2_5'UTR|CRYZ_uc001dgl.2_5'UTR|CRYZ_uc001dgm.2_5'UTR|TYW3_uc010oqw.1_Missense_Mutation_p.D27Y|TYW3_uc010oqx.1_Missense_Mutation_p.D27Y|TYW3_uc010oqy.1_RNA	NM_138467	NP_612476	Q6IPR3	TYW3_HUMAN	tRNA-yW synthesizing protein 3 homolog isoform	27					tRNA processing		methyltransferase activity			ovary(2)	2						GGGCAGTGTTGACGAGGATGT	0.572			NA											7	27					0.00198382	0.00215447	0.001984	1	0
CSDE1	7812	broad.mit.edu	37	1	115266602	115266602	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:115266602G>C	uc001efk.2	-	16	2241	c.1775C>G	c.(1774-1776)GCT>GGT	p.A592G	CSDE1_uc001efi.2_Missense_Mutation_p.A638G|CSDE1_uc001efj.2_RNA|CSDE1_uc001efl.2_Missense_Mutation_p.A561G|CSDE1_uc001efm.2_Missense_Mutation_p.A607G|CSDE1_uc009wgv.2_Missense_Mutation_p.A592G|CSDE1_uc001efn.2_Missense_Mutation_p.A561G	NM_001007553	NP_001007554	O75534	CSDE1_HUMAN	upstream of NRAS isoform 1	592					male gonad development|regulation of transcription, DNA-dependent	cytoplasm	DNA binding|protein binding|RNA binding			ovary(1)	1	all_epithelial(7;5.11e-05)|all_lung(7;0.000179)|Lung NSC(6;0.00195)|Lung SC(450;0.211)	all_cancers(81;2.21e-07)|all_epithelial(167;4.2e-07)|all_lung(203;9.97e-06)|Lung NSC(69;1.74e-05)		Lung(183;0.0234)|Colorectal(144;0.0686)|COAD - Colon adenocarcinoma(174;0.111)|all cancers(265;0.112)|Epithelial(280;0.124)|LUSC - Lung squamous cell carcinoma(189;0.133)		GGTGGGATCAGCTTCCTCAGT	0.403			NA											8	120					0	0	0.004482	0	0
ATP1A2	477	broad.mit.edu	37	1	160093741	160093741	+	Silent	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:160093741G>C	uc001fvc.2	+	5	522	c.390G>C	c.(388-390)CTG>CTC	p.L130L	ATP1A2_uc001fvb.2_Silent_p.L130L|ATP1A2_uc010piz.1_5'UTR	NM_000702	NP_000693	P50993	AT1A2_HUMAN	Na+/K+ -ATPase alpha 2 subunit proprotein	130	Helical; (Potential).				ATP biosynthetic process		ATP binding|metal ion binding|sodium:potassium-exchanging ATPase activity			central_nervous_system(3)|ovary(2)|skin(2)	7	all_cancers(52;1.11e-16)|all_hematologic(112;0.093)		BRCA - Breast invasive adenocarcinoma(70;0.111)|LUSC - Lung squamous cell carcinoma(543;0.246)			AGCTATATCTGGGTGTGGTGC	0.542			NA											8	42					0	0	0.00308	0	0
SLAMF1	6504	broad.mit.edu	37	1	160604481	160604481	+	Missense_Mutation	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:160604481T>C	uc001fwl.3	-	3	968	c.622A>G	c.(622-624)ATC>GTC	p.I208V	SLAMF1_uc010pjk.1_RNA|SLAMF1_uc010pjl.1_RNA|SLAMF1_uc010pjm.1_RNA	NM_003037	NP_003028	Q13291	SLAF1_HUMAN	signaling lymphocytic activation molecule family	208	Ig-like C2-type.|Extracellular (Potential).|Ig-like V-type.				interspecies interaction between organisms|lymphocyte activation|positive regulation of cell proliferation	integral to membrane	antigen binding|transmembrane receptor activity			ovary(1)|breast(1)	2	all_cancers(52;4.94e-17)|all_hematologic(112;0.093)		BRCA - Breast invasive adenocarcinoma(70;0.0175)			ACGGTGCAGATGTAGATATTG	0.607			NA											15	98					0	0	0.00245	0	0
FAM129A	116496	broad.mit.edu	37	1	184863276	184863276	+	Missense_Mutation	SNP	T	T	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:184863276T>G	uc001gra.2	-	3	445	c.251A>C	c.(250-252)AAG>ACG	p.K84T	FAM129A_uc009wyh.1_Missense_Mutation_p.K84T|FAM129A_uc009wyi.1_Intron	NM_052966	NP_443198	Q9BZQ8	NIBAN_HUMAN	niban protein isoform 2	84					negative regulation of protein phosphorylation|positive regulation of protein phosphorylation|positive regulation of translation|response to endoplasmic reticulum stress	cytoplasm|nucleus|plasma membrane				ovary(3)|skin(1)	4						CTTCCACTTCTTTATGTCTTC	0.353			NA											3	94					0	0	0.000602	0	0
ZP4	57829	broad.mit.edu	37	1	238050095	238050095	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:238050095G>A	uc001hym.2	-	6	815	c.815C>T	c.(814-816)TCT>TTT	p.S272F	LOC100130331_uc010pyc.1_Intron	NM_021186	NP_067009	Q12836	ZP4_HUMAN	zona pellucida glycoprotein 4 preproprotein	272	ZP.|Extracellular (Potential).				acrosomal vesicle exocytosis|negative regulation of binding of sperm to zona pellucida|positive regulation of acrosome reaction|positive regulation of humoral immune response|positive regulation of protein kinase activity|positive regulation of T cell proliferation|protein kinase A signaling cascade|protein kinase C signaling cascade	integral to membrane|intracellular|plasma membrane|proteinaceous extracellular matrix	acrosin binding|receptor activity			ovary(2)|skin(1)	3	Ovarian(103;0.103)	all_cancers(173;0.00175)|all_epithelial(177;0.162)|all_neural(198;0.164)|Melanoma(53;0.211)|Prostate(94;0.214)	OV - Ovarian serous cystadenocarcinoma(106;0.00989)			ACGAGTGACAGAGCCACGGCT	0.483	NSCLC(166;160 2029 11600 18754 19936)		NA											8	102					0	0	0.00308	0	0
NLRP3	114548	broad.mit.edu	37	1	247597434	247597434	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:247597434G>C	uc001icr.2	+	7	2495	c.2357G>C	c.(2356-2358)TGC>TCC	p.C786S	NLRP3_uc001ics.2_Missense_Mutation_p.C786S|NLRP3_uc001icu.2_Missense_Mutation_p.C786S|NLRP3_uc001icw.2_Missense_Mutation_p.C729S|NLRP3_uc001icv.2_Missense_Mutation_p.C729S|NLRP3_uc010pyw.1_Intron	NM_001079821	NP_001073289	Q96P20	NALP3_HUMAN	NLR family, pyrin domain containing 3 isoform a	786	LRR 2.				detection of biotic stimulus|induction of apoptosis|inflammatory response|negative regulation of NF-kappaB import into nucleus|negative regulation of NF-kappaB transcription factor activity|positive regulation of interleukin-1 beta secretion|protein oligomerization|signal transduction	cytoplasm	ATP binding|peptidoglycan binding|protein binding			lung(8)|skin(8)|ovary(7)|upper_aerodigestive_tract(1)|breast(1)|pancreas(1)	26	all_cancers(71;9.66e-05)|all_epithelial(71;1.85e-05)|Breast(184;0.0226)|Ovarian(71;0.0377)|all_lung(81;0.0662)|Lung NSC(105;0.0724)	all_cancers(173;0.0172)	OV - Ovarian serous cystadenocarcinoma(106;0.0141)			TCGCATGAGTGCTGCTTCGAC	0.557			NA											19	104					0	0	0.014323	0	0
PCDH15	65217	broad.mit.edu	37	10	55826528	55826528	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr10:55826528C>T	uc001jju.1	-	18	2604	c.2209G>A	c.(2209-2211)GGT>AGT	p.G737S	PCDH15_uc010qhq.1_Missense_Mutation_p.G742S|PCDH15_uc010qhr.1_Missense_Mutation_p.G737S|PCDH15_uc010qhs.1_Missense_Mutation_p.G749S|PCDH15_uc010qht.1_Missense_Mutation_p.G744S|PCDH15_uc010qhu.1_Missense_Mutation_p.G737S|PCDH15_uc001jjv.1_Missense_Mutation_p.G715S|PCDH15_uc010qhv.1_Missense_Mutation_p.G737S|PCDH15_uc010qhw.1_Missense_Mutation_p.G700S|PCDH15_uc010qhx.1_Missense_Mutation_p.G666S|PCDH15_uc010qhy.1_Missense_Mutation_p.G742S|PCDH15_uc010qhz.1_Missense_Mutation_p.G737S|PCDH15_uc010qia.1_Missense_Mutation_p.G715S|PCDH15_uc010qib.1_Missense_Mutation_p.G715S|PCDH15_uc001jjw.2_Missense_Mutation_p.G737S	NM_033056	NP_149045	Q96QU1	PCD15_HUMAN	protocadherin 15 isoform CD1-4 precursor	737	Extracellular (Potential).|Cadherin 7.				equilibrioception|homophilic cell adhesion|photoreceptor cell maintenance|sensory perception of sound	extracellular region|extracellular space|integral to membrane|photoreceptor outer segment|plasma membrane|stereocilium|synapse	calcium ion binding			pancreas(5)|ovary(4)|upper_aerodigestive_tract(2)|skin(2)	13		Melanoma(3;0.117)|Lung SC(717;0.238)				TTTACTTGACCCACAAAGGCA	0.328			NA								HNSCC(58;0.16)			3	61					0	0	0.004672	0	0
HPS1	3257	broad.mit.edu	37	10	100177472	100177472	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr10:100177472C>T	uc010qpf.1	-	20	2198	c.1952G>A	c.(1951-1953)CGC>CAC	p.R651H	PYROXD2_uc001kpc.2_5'Flank|PYROXD2_uc001kpd.2_5'Flank|PYROXD2_uc010qpe.1_5'Flank|HPS1_uc001kpi.1_Missense_Mutation_p.R652H|HPS1_uc001kpj.1_Silent_p.A560A|HPS1_uc001kpk.1_Missense_Mutation_p.R476H	NM_000195	NP_000186	Q92902	HPS1_HUMAN	Hermansky-Pudlak syndrome 1 protein isoform a	651					lysosome organization|response to stimulus|visual perception	cytoplasmic membrane-bounded vesicle|integral to plasma membrane|lysosome|membrane fraction|soluble fraction	protein dimerization activity			skin(1)	1		Colorectal(252;0.234)		Epithelial(162;3.87e-12)|all cancers(201;5.63e-10)		GCTGTAGTAGCGCAGGAGCTT	0.637			NA							Hermansky-Pudlak_syndrome				3	31					0	0	0.004672	0	0
CHST15	51363	broad.mit.edu	37	10	125769718	125769718	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr10:125769718C>A	uc001lhl.2	-	7	2146	c.1633G>T	c.(1633-1635)GCT>TCT	p.A545S	CHST15_uc001lhm.2_Missense_Mutation_p.A545S|CHST15_uc001lhn.2_Missense_Mutation_p.A545S	NM_015892	NP_056976	Q7LFX5	CHSTF_HUMAN	B cell RAG associated protein	545	Lumenal (Potential).				hexose biosynthetic process	Golgi membrane|integral to membrane	3'-phosphoadenosine 5'-phosphosulfate binding|N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity			ovary(1)	1						GCCAGCCTAGCGTTGAAGGGC	0.622			NA											10	35					0.000673444	0.000747449	0.008291	1	0
MGMT	4255	broad.mit.edu	37	10	131557476	131557476	+	Silent	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr10:131557476C>A	uc001lkh.2	+	4	404	c.378C>A	c.(376-378)ACC>ACA	p.T126T		NM_002412	NP_002403	P16455	MGMT_HUMAN	O-6-methylguanine-DNA methyltransferase	95										ovary(1)|breast(1)	2		all_cancers(35;9.44e-09)|all_epithelial(44;6.98e-08)|Lung NSC(174;0.0157)|all_lung(145;0.0201)|all_neural(114;0.0732)|Colorectal(57;0.0792)|Breast(234;0.167)		OV - Ovarian serous cystadenocarcinoma(35;0.00291)		AGTCGTTCACCAGACAGGTGT	0.478			NA						Direct_reversal_of_damage					10	129					0.000151284	0.000173633	0.001855	1	0
WEE1	7465	broad.mit.edu	37	11	9597496	9597496	+	Missense_Mutation	SNP	T	T	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:9597496T>G	uc001mhs.2	+	2	891	c.638T>G	c.(637-639)CTC>CGC	p.L213R	WEE1_uc001mht.2_5'UTR|WEE1_uc001mhu.2_5'UTR	NM_003390	NP_003381	P30291	WEE1_HUMAN	WEE1 tyrosine kinase isoform 1	213					blood coagulation|cell cycle checkpoint|cell division|G1/S transition of mitotic cell cycle|G2/M transition of mitotic cell cycle|mitosis|S phase of mitotic cell cycle	nucleoplasm	ATP binding|magnesium ion binding|non-membrane spanning protein tyrosine kinase activity|protein binding|protein serine/threonine kinase activity			central_nervous_system(2)|ovary(1)|breast(1)|skin(1)	5				all cancers(16;4.59e-09)|Epithelial(150;3.15e-08)|BRCA - Breast invasive adenocarcinoma(625;0.0484)		GGTAGTTCTCTCTTCATGGAT	0.388			NA											21	69					0	0	0.010504	0	0
NAV2	89797	broad.mit.edu	37	11	20067055	20067055	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:20067055C>G	uc010rdm.1	+	15	4171	c.3810C>G	c.(3808-3810)AAC>AAG	p.N1270K	NAV2_uc001mpp.2_Missense_Mutation_p.N1183K|NAV2_uc001mpr.3_Missense_Mutation_p.N1247K|NAV2_uc001mpt.2_Missense_Mutation_p.N333K|NAV2_uc009yhx.2_Missense_Mutation_p.N333K|NAV2_uc009yhy.1_Missense_Mutation_p.N246K	NM_145117	NP_660093	Q8IVL1	NAV2_HUMAN	neuron navigator 2 isoform 2	1270						nucleus	ATP binding|helicase activity			skin(4)|ovary(1)|pancreas(1)	6						GTCTGGTCAACCAAACAGACA	0.547			NA											5	42					0	0	0.000602	0	0
C11orf41	25758	broad.mit.edu	37	11	33689585	33689585	+	Missense_Mutation	SNP	A	A	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:33689585A>C	uc001mup.3	+	20	5577	c.5453A>C	c.(5452-5454)GAC>GCC	p.D1818A		NM_012194	NP_036326	Q6ZVL6	CK041_HUMAN	hypothetical protein LOC25758	1812						integral to membrane				ovary(2)	2						GCAGAAAACGACCCGTCTGAC	0.637			NA											5	23					0	0	0.000602	0	0
OR5L2	26338	broad.mit.edu	37	11	55594985	55594985	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:55594985C>T	uc001nhy.1	+	1	291	c.291C>T	c.(289-291)TGC>TGT	p.C97C		NM_001004739	NP_001004739	Q8NGL0	OR5L2_HUMAN	olfactory receptor, family 5, subfamily L,	97	Extracellular (Potential).				sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			ovary(1)	1		all_epithelial(135;0.208)				TCCTAGGGTGCATGGTGCAAT	0.478			NA								HNSCC(27;0.073)			23	161					0	0	0.012319	0	0
MS4A6A	64231	broad.mit.edu	37	11	59949120	59949120	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:59949120G>A	uc001nor.2	-	2	319	c.81C>T	c.(79-81)CCC>CCT	p.P27P	MS4A6A_uc001noq.2_Silent_p.P27P|MS4A6A_uc001nos.3_Silent_p.P55P|MS4A6A_uc009ymv.2_Silent_p.P27P|MS4A6A_uc001not.2_Silent_p.P27P|MS4A6A_uc010rla.1_Silent_p.P55P|MS4A6A_uc010rlb.1_Silent_p.P27P	NM_152852	NP_690591	Q9H2W1	M4A6A_HUMAN	membrane-spanning 4-domains, subfamily A, member	27	Cytoplasmic (Potential).					integral to membrane	receptor activity				0						TGGTGGGTTCGGGTTTCTCTG	0.458			NA											36	135					0	0	0.004878	0	0
NCAM1	4684	broad.mit.edu	37	11	113140955	113140955	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:113140955G>T	uc001pns.2	+	3	349	c.317G>T	c.(316-318)GGC>GTC	p.G106V	uc010rwu.1_3'UTR|NCAM1_uc001pnt.2_5'Flank			P13591	NCAM1_HUMAN	SubName: Full=cDNA FLJ52974, highly similar to Neural cell adhesion molecule 1, 140 kDa isoform;	726	Helical; (Potential).				axon guidance|interferon-gamma-mediated signaling pathway	anchored to membrane|extracellular region|Golgi membrane|integral to membrane				ovary(1)	1		all_cancers(61;5.82e-19)|all_epithelial(67;6.87e-12)|Melanoma(852;1.99e-05)|all_hematologic(158;3.66e-05)|Acute lymphoblastic leukemia(157;0.00119)|Breast(348;0.0109)|all_neural(223;0.0299)|Medulloblastoma(222;0.0458)|Renal(330;0.198)|Prostate(24;0.207)		BRCA - Breast invasive adenocarcinoma(274;1.78e-05)|Epithelial(105;0.000114)|all cancers(92;0.000467)|OV - Ovarian serous cystadenocarcinoma(223;0.212)		GCCATCGTGGGCATCCTCATC	0.582			NA											36	211					4.67007e-22	6.41737e-22	0.00874	1	0
BACE1	23621	broad.mit.edu	37	11	117160510	117160510	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:117160510G>T	uc001pqz.2	-	9	1739	c.1278C>A	c.(1276-1278)TTC>TTA	p.F426L	BACE1_uc001pqw.2_Missense_Mutation_p.F401L|BACE1_uc001pqx.2_Missense_Mutation_p.F357L|BACE1_uc001pqy.2_Missense_Mutation_p.F382L|BACE1_uc010rxg.1_Missense_Mutation_p.F301L|BACE1_uc010rxh.1_Missense_Mutation_p.F326L|uc010rxi.1_5'Flank	NM_012104	NP_036236	P56817	BACE1_HUMAN	beta-site APP-cleaving enzyme 1 isoform A	426	Extracellular (Potential).				beta-amyloid metabolic process|membrane protein ectodomain proteolysis	cell surface|cytoplasmic vesicle membrane|endoplasmic reticulum|endosome|integral to plasma membrane|trans-Golgi network	aspartic-type endopeptidase activity|beta-aspartyl-peptidase activity|protein binding			ovary(1)	1	all_hematologic(175;0.0487)	Breast(348;0.00908)|Medulloblastoma(222;0.0425)|all_hematologic(192;0.196)|all_neural(223;0.234)		BRCA - Breast invasive adenocarcinoma(274;1.69e-05)|Epithelial(105;0.000563)|all cancers(92;0.0032)		CTGCCGTCCTGAACTcatcgt	0.274			NA											11	53					0.000673444	0.000747449	0.008291	1	0
GRIK4	2900	broad.mit.edu	37	11	120776031	120776031	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr11:120776031C>A	uc001pxn.2	+	13	1592	c.1305C>A	c.(1303-1305)CAC>CAA	p.H435Q	GRIK4_uc009zav.1_Missense_Mutation_p.H435Q|GRIK4_uc009zaw.1_Missense_Mutation_p.H435Q|GRIK4_uc009zax.1_Missense_Mutation_p.H435Q	NM_014619	NP_055434	Q16099	GRIK4_HUMAN	glutamate receptor KA1 precursor	435	Extracellular (Potential).				glutamate signaling pathway|synaptic transmission	cell junction|postsynaptic membrane	extracellular-glutamate-gated ion channel activity|kainate selective glutamate receptor activity			ovary(2)|central_nervous_system(1)	3		Breast(109;0.000868)|Medulloblastoma(222;0.0453)|all_neural(223;0.116)|all_hematologic(192;0.21)		BRCA - Breast invasive adenocarcinoma(274;1.24e-05)|OV - Ovarian serous cystadenocarcinoma(223;0.116)	L-Glutamic Acid(DB00142)	AGGGGAACCACCAGGAGATGG	0.542			NA											12	225					1.05317e-09	1.36372e-09	0.00245	1	0
LRTM2	654429	broad.mit.edu	37	12	1940363	1940363	+	Silent	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:1940363C>A	uc001qjt.2	+	4	1136	c.330C>A	c.(328-330)TCC>TCA	p.S110S	CACNA2D4_uc001qjp.2_Intron|CACNA2D4_uc009zds.1_Intron|CACNA2D4_uc009zdt.1_Intron|CACNA2D4_uc009zdr.1_Intron|LRTM2_uc001qju.2_Silent_p.S110S|LRTM2_uc010sdx.1_Silent_p.S110S|LRTM2_uc001qjv.2_Intron	NM_001039029	NP_001034118	Q8N967	LRTM2_HUMAN	leucine-rich repeats and transmembrane domains 2	110	LRR 2.|Extracellular (Potential).					integral to membrane				large_intestine(1)	1	Ovarian(42;0.107)		OV - Ovarian serous cystadenocarcinoma(31;0.000834)			TGCCCCGCTCCATTTTCGGGG	0.617			NA											6	76					5.18039e-06	6.30385e-06	0.00308	1	0
C1S	716	broad.mit.edu	37	12	7177423	7177423	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:7177423C>T	uc001qsj.2	+	15	2254	c.1535C>T	c.(1534-1536)CCG>CTG	p.P512L	C1S_uc001qsk.2_Missense_Mutation_p.P512L|C1S_uc001qsl.2_Missense_Mutation_p.P512L|C1S_uc009zfr.2_Missense_Mutation_p.P345L|C1S_uc009zfs.2_RNA	NM_201442	NP_958850	P09871	C1S_HUMAN	complement component 1, s subcomponent	512	Peptidase S1.				complement activation, classical pathway|innate immune response|proteolysis	extracellular region	calcium ion binding|serine-type endopeptidase activity			skin(1)	1					Abciximab(DB00054)|Adalimumab(DB00051)|Basiliximab(DB00074)|Cetuximab(DB00002)|Etanercept(DB00005)|Gemtuzumab ozogamicin(DB00056)|Ibritumomab(DB00078)|Immune globulin(DB00028)|Muromonab(DB00075)|Rituximab(DB00073)|Trastuzumab(DB00072)	TTTATTCATCCGGGATGGAAG	0.512	GBM(156;750 1943 12971 24779 31015)		NA											3	28					0	0	0.004672	0	0
C3AR1	719	broad.mit.edu	37	12	8211488	8211488	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:8211488G>C	uc001qtv.1	-	2	1386	c.1294C>G	c.(1294-1296)CCC>GCC	p.P432A		NM_004054	NP_004045	Q16581	C3AR_HUMAN	complement component 3a receptor 1	432	Helical; Name=7; (Potential).				blood circulation|chemotaxis|elevation of cytosolic calcium ion concentration|inflammatory response	integral to plasma membrane	C3a anaphylatoxin receptor activity|complement component C3a receptor activity|phosphatidylinositol phospholipase C activity			ovary(1)	1				Kidney(36;0.0893)		TAAAGGAAGGGATTAAAGCAA	0.478			NA											8	109					0	0	0.00308	0	0
DDX12	440081	broad.mit.edu	37	12	9574030	9574030	+	Missense_Mutation	SNP	T	T	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:9574030T>G	uc010sgs.1	-	20	2201	c.2006A>C	c.(2005-2007)AAC>ACC	p.N669T	DDX12_uc001qvx.3_5'Flank|DDX12_uc001qvy.1_5'Flank	NM_004400	NP_004391			DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12												0						TAGCGGCTGGTTGGAGACCCC	0.597			NA											8	89					0	0	0.00333	0	0
GRIN2B	2904	broad.mit.edu	37	12	13717037	13717037	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:13717037C>G	uc001rbt.2	-	13	3314	c.3135G>C	c.(3133-3135)AAG>AAC	p.K1045N		NM_000834	NP_000825	Q13224	NMDE2_HUMAN	N-methyl-D-aspartate receptor subunit 2B	1045	Cytoplasmic (Potential).				response to ethanol	cell junction|N-methyl-D-aspartate selective glutamate receptor complex|outer membrane-bounded periplasmic space|postsynaptic membrane	glycine binding|N-methyl-D-aspartate selective glutamate receptor activity|zinc ion binding			central_nervous_system(4)|ovary(3)|skin(3)|lung(2)	12					Felbamate(DB00949)|Haloperidol(DB00502)|L-Glutamic Acid(DB00142)|Loperamide(DB00836)|Memantine(DB01043)	AGCGGTCGCTCTTGAAGGAGA	0.592			NA											5	60					0	0	0.000602	0	0
KIAA0528	9847	broad.mit.edu	37	12	22688245	22688245	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:22688245C>A	uc001rfq.2	-	3	352	c.124G>T	c.(124-126)GTG>TTG	p.V42L	KIAA0528_uc010sir.1_5'UTR|KIAA0528_uc010sis.1_Missense_Mutation_p.V42L|KIAA0528_uc010sit.1_Missense_Mutation_p.V42L|KIAA0528_uc010siu.1_Missense_Mutation_p.V42L|KIAA0528_uc001rfr.2_Missense_Mutation_p.V42L|KIAA0528_uc009ziy.1_Missense_Mutation_p.V42L	NM_014802	NP_055617	Q86YS7	K0528_HUMAN	hypothetical protein LOC9847	42	C2.						protein binding			ovary(1)|large_intestine(1)|breast(1)|central_nervous_system(1)	4						TTAAGGTACACATCTGTTTTA	0.284			NA											4	30					0.00116845	0.00128976	0.001168	1	0
ARHGAP9	64333	broad.mit.edu	37	12	57872486	57872486	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:57872486C>A	uc001sod.2	-	6	777	c.584G>T	c.(583-585)AGG>ATG	p.R195M	ARHGAP9_uc001snz.2_5'Flank|ARHGAP9_uc001soa.2_5'Flank|ARHGAP9_uc001sob.2_Missense_Mutation_p.R124M|ARHGAP9_uc001soc.2_Missense_Mutation_p.R124M|ARHGAP9_uc001soe.1_Missense_Mutation_p.R203M|ARHGAP9_uc010sro.1_Missense_Mutation_p.R124M	NM_032496	NP_115885	Q9BRR9	RHG09_HUMAN	Rho GTPase activating protein 9 isoform 1	124					regulation of small GTPase mediated signal transduction|small GTPase mediated signal transduction	cytosol	GTPase activator activity|protein binding			lung(1)	1			GBM - Glioblastoma multiforme(3;3.37e-34)			AGCCTGAGCCCTGCTTGGGAG	0.582			NA											22	112					1.22574e-08	1.57706e-08	0.014323	1	0
MARS	4141	broad.mit.edu	37	12	57910304	57910304	+	Silent	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:57910304A>G	uc001sog.2	+	21	2666	c.2643A>G	c.(2641-2643)AAA>AAG	p.K881K	MARS_uc001sof.1_RNA|MARS_uc001soh.1_3'UTR	NM_004990	NP_004981	P56192	SYMC_HUMAN	methionyl-tRNA synthetase	881	WHEP-TRS.				methionyl-tRNA aminoacylation	cytosol	ATP binding|methionine-tRNA ligase activity|protein binding|tRNA binding			ovary(3)|central_nervous_system(1)|pancreas(1)	5			GBM - Glioblastoma multiforme(3;4.27e-41)		L-Methionine(DB00134)	ATCTAAAGAAACAGTTGGCTG	0.458			NA											5	42					0	0	0.000602	0	0
SLC16A7	9194	broad.mit.edu	37	12	60168856	60168856	+	Silent	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:60168856T>C	uc001sqs.2	+	5	1079	c.780T>C	c.(778-780)GGT>GGC	p.G260G	SLC16A7_uc001sqt.2_Silent_p.G260G|SLC16A7_uc001squ.2_Silent_p.G260G|SLC16A7_uc009zqi.2_Silent_p.G161G|SLC16A7_uc010ssi.1_Silent_p.G161G	NM_004731	NP_004722	O60669	MOT2_HUMAN	solute carrier family 16, member 7	260	Helical; (Potential).					integral to plasma membrane|membrane fraction	pyruvate secondary active transmembrane transporter activity|secondary active monocarboxylate transmembrane transporter activity|symporter activity			ovary(1)	1				GBM - Glioblastoma multiforme(3;0.0303)	Pyruvic acid(DB00119)	TGTTCCTAGGTTTTTTTGCCC	0.353			NA											6	300					0	0	0.001984	0	0
IFNG	3458	broad.mit.edu	37	12	68549203	68549203	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:68549203G>A	uc001stw.1	-	4	557	c.431C>T	c.(430-432)TCG>TTG	p.S144L		NM_000619	NP_000610	P01579	IFNG_HUMAN	interferon, gamma precursor	144					cell cycle arrest|interferon-gamma-mediated signaling pathway|negative regulation of interleukin-17 production|negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis|negative regulation of metanephric nephron tubule epithelial cell differentiation|negative regulation of smooth muscle cell proliferation|negative regulation of transcription from RNA polymerase II promoter|positive regulation of calcidiol 1-monooxygenase activity|positive regulation of fructose 1,6-bisphosphate 1-phosphatase activity|positive regulation of fructose 1,6-bisphosphate metabolic process|positive regulation of interleukin-12 production|positive regulation of interleukin-23 production|positive regulation of killing of cells of other organism|positive regulation of membrane protein ectodomain proteolysis|positive regulation of mesenchymal cell proliferation|positive regulation of nitric oxide biosynthetic process|positive regulation of osteoclast differentiation|positive regulation of peptidyl-serine phosphorylation of STAT protein|positive regulation of smooth muscle cell apoptosis|positive regulation of tumor necrosis factor (ligand) superfamily member 11 production|positive regulation of tyrosine phosphorylation of Stat1 protein|positive regulation of vitamin D biosynthetic process|protein import into nucleus, translocation|regulation of insulin secretion|regulation of interferon-gamma-mediated signaling pathway|response to virus	extracellular space	cytokine activity|interferon-gamma receptor binding				0			Lung(24;0.000131)|LUAD - Lung adenocarcinoma(15;0.00107)|STAD - Stomach adenocarcinoma(21;0.018)	GBM - Glioblastoma multiforme(7;0.000829)	Glucosamine(DB01296)|Interferon gamma-1b(DB00033)|Simvastatin(DB00641)	AGCTGCTGGCGACAGTTCAGC	0.428			NA											156	24					0	0	0.01441	0	0
NUP107	57122	broad.mit.edu	37	12	69115726	69115726	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:69115726G>A	uc001suf.2	+	16	1532	c.1417G>A	c.(1417-1419)GAT>AAT	p.D473N	NUP107_uc001sug.2_Missense_Mutation_p.D320N|NUP107_uc010stj.1_Missense_Mutation_p.D444N	NM_020401	NP_065134	P57740	NU107_HUMAN	nucleoporin 107kDa	473					carbohydrate metabolic process|glucose transport|mitotic prometaphase|mRNA export from nucleus|protein transport|regulation of glucose transport|transmembrane transport|viral reproduction	condensed chromosome kinetochore|cytosol|Nup107-160 complex	nucleocytoplasmic transporter activity|protein binding			skin(1)	1	Breast(13;6.25e-06)		Lung(24;0.000131)|LUAD - Lung adenocarcinoma(15;0.00107)|STAD - Stomach adenocarcinoma(21;0.00694)			AGCAACTCTGGATGAAACTGA	0.463			NA											8	299					0	0	0.00308	0	0
FRS2	10818	broad.mit.edu	37	12	69965138	69965138	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:69965138G>A	uc001suy.2	+	8	846	c.336G>A	c.(334-336)GTG>GTA	p.V112V	FRS2_uc001suz.2_Silent_p.V112V|FRS2_uc009zrj.2_Silent_p.V112V|FRS2_uc009zrk.2_Silent_p.V112V	NM_006654	NP_006645	Q8WU20	FRS2_HUMAN	fibroblast growth factor receptor substrate 2	112	IRS-type PTB.				activation of MAPKK activity|activation of phospholipase C activity|fibroblast growth factor receptor signaling pathway|G-protein coupled receptor protein signaling pathway|insulin receptor signaling pathway|nerve growth factor receptor signaling pathway|transmembrane receptor protein tyrosine phosphatase signaling pathway	endomembrane system|endosome|integral to plasma membrane|membrane fraction	fibroblast growth factor receptor binding|insulin receptor binding|phosphatase activator activity|transmembrane receptor protein tyrosine kinase adaptor activity			prostate(1)|kidney(1)	2	Breast(13;2.15e-06)|Esophageal squamous(21;0.187)		Epithelial(6;2.94e-18)|Lung(24;9.68e-05)|OV - Ovarian serous cystadenocarcinoma(12;0.000984)|LUAD - Lung adenocarcinoma(15;0.00107)|STAD - Stomach adenocarcinoma(21;0.0151)|Kidney(9;0.143)|LUSC - Lung squamous cell carcinoma(43;0.24)			GTATAAATGTGGTGGAAGAGC	0.368			NA									OREG0021986	type=REGULATORY REGION|TFbs=CTCF|Dataset=CTCF ChIP-chip sites (Ren lab)|EvidenceSubtype=ChIP-on-chip (ChIP-chip)	17	426					0	0	0.004007	0	0
TPCN1	53373	broad.mit.edu	37	12	113704105	113704105	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:113704105C>A	uc001tuw.2	+	4	655	c.358C>A	c.(358-360)CTG>ATG	p.L120M	TPCN1_uc001tux.2_Missense_Mutation_p.L192M|TPCN1_uc010syt.1_Missense_Mutation_p.L52M	NM_017901	NP_060371	Q9ULQ1	TPC1_HUMAN	two pore segment channel 1 isoform 2	120	Helical; Name=S1 of repeat I; (Potential).					endosome membrane|integral to membrane|lysosomal membrane	NAADP-sensitive calcium-release channel activity|voltage-gated ion channel activity			skin(2)|ovary(1)	3						CCTGCTGCTGCTGCTGCTCTC	0.652			NA											60	326					6.26901e-30	8.79403e-30	0.01441	1	0
DNAH10	196385	broad.mit.edu	37	12	124311323	124311323	+	Silent	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr12:124311323C>G	uc001uft.3	+	24	3940	c.3915C>G	c.(3913-3915)CTC>CTG	p.L1305L		NM_207437	NP_997320	Q8IVF4	DYH10_HUMAN	dynein, axonemal, heavy chain 10	1305	Stem (By similarity).				microtubule-based movement	cilium axoneme|cytoplasm|dynein complex|microtubule	ATP binding|ATPase activity|microtubule motor activity			ovary(3)|skin(2)|central_nervous_system(1)	6	all_neural(191;0.101)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;0.000207)|Epithelial(86;0.000556)|all cancers(50;0.00346)		TCAGGGCTCTCAGAAAGCTAC	0.453			NA											3	112					0	0	0.004672	0	0
ATP11A	23250	broad.mit.edu	37	13	113474218	113474218	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr13:113474218G>A	uc001vsi.3	+	8	767	c.679G>A	c.(679-681)GTG>ATG	p.V227M	ATP11A_uc001vsj.3_Missense_Mutation_p.V227M|ATP11A_uc001vsm.1_Missense_Mutation_p.V103M	NM_015205	NP_056020	P98196	AT11A_HUMAN	ATPase, class VI, type 11A isoform a	227	Cytoplasmic (Potential).				ATP biosynthetic process	integral to membrane	ATP binding|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism|magnesium ion binding|phospholipid-translocating ATPase activity			large_intestine(2)|ovary(2)	4	all_lung(23;0.000374)|Lung NSC(43;0.0107)|Lung SC(71;0.0753)|all_neural(89;0.0804)|Hepatocellular(20;0.0877)|Medulloblastoma(90;0.163)	all_lung(25;0.134)|all_epithelial(44;0.141)				CGCCAGGTTCGTGGGTCGCAT	0.627			NA											3	38					0	0	0.009096	0	0
PTGR2	145482	broad.mit.edu	37	14	74345977	74345977	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr14:74345977G>T	uc001xow.2	+	6	858	c.698G>T	c.(697-699)GGT>GTT	p.G233V	PTGR2_uc010tue.1_Missense_Mutation_p.G233V|PTGR2_uc001xox.2_Missense_Mutation_p.G233V|ZNF410_uc001xoy.1_Intron	NM_001146154	NP_001139626	Q8N8N7	PTGR2_HUMAN	prostaglandin reductase 2	233					prostaglandin metabolic process		15-oxoprostaglandin 13-oxidase activity|zinc ion binding				0						GACAATGTTGGTGGTAACATC	0.358	Esophageal Squamous(98;1155 1417 16452 47043 47872)		NA											20	140					2.32416e-17	3.17216e-17	0.014323	1	0
SEMA6D	80031	broad.mit.edu	37	15	48063639	48063639	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr15:48063639G>T	uc010bek.2	+	19	3239	c.2879G>T	c.(2878-2880)AGA>ATA	p.R960I	SEMA6D_uc001zvw.2_Missense_Mutation_p.R898I|SEMA6D_uc001zvy.2_Missense_Mutation_p.R960I|SEMA6D_uc001zvz.2_Missense_Mutation_p.R904I|SEMA6D_uc001zwa.2_3'UTR|SEMA6D_uc001zwb.2_Missense_Mutation_p.R898I|SEMA6D_uc001zwc.2_Missense_Mutation_p.R885I	NM_153618	NP_705871	Q8NFY4	SEM6D_HUMAN	semaphorin 6D isoform 4 precursor	960	Cytoplasmic (Potential).				axon guidance	cytoplasm|integral to membrane|plasma membrane	receptor activity			skin(3)|breast(1)	4		all_lung(180;0.000635)|Myeloproliferative disorder(241;0.116)|Melanoma(134;0.18)		all cancers(107;1.2e-11)|GBM - Glioblastoma multiforme(94;1.2e-06)		TCTCTGGAAAGACAAAGAGGT	0.468			NA											14	89					4.3838e-07	5.46622e-07	0.001855	1	0
CGNL1	84952	broad.mit.edu	37	15	57730535	57730535	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr15:57730535C>A	uc002aeg.2	+	2	414	c.338C>A	c.(337-339)CCA>CAA	p.P113Q	CGNL1_uc010bfw.2_Missense_Mutation_p.P113Q	NM_032866	NP_116255	Q0VF96	CGNL1_HUMAN	cingulin-like 1	113	Head.					myosin complex|tight junction	motor activity			skin(6)|ovary(4)|central_nervous_system(1)	11				all cancers(107;0.121)|GBM - Glioblastoma multiforme(80;0.186)		CAGCCTAGCCCAATAAGAAAC	0.488			NA											5	52					3.59834e-05	4.25067e-05	0.001168	1	0
ACAN	176	broad.mit.edu	37	15	89382197	89382197	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr15:89382197C>T	uc010upo.1	+	3	748	c.374C>T	c.(373-375)TCC>TTC	p.S125F	ACAN_uc002bmx.2_Missense_Mutation_p.S125F|ACAN_uc010upp.1_Missense_Mutation_p.S125F|ACAN_uc002bna.2_RNA	NM_013227	NP_037359	E7EX88	E7EX88_HUMAN	aggrecan isoform 2 precursor	125					cell adhesion		hyaluronic acid binding|sugar binding			ovary(2)|central_nervous_system(1)	3	Lung NSC(78;0.0392)|all_lung(78;0.077)		BRCA - Breast invasive adenocarcinoma(143;0.146)			AGCCTGCGCTCCAATGACTCT	0.627			NA											5	123					0	0	0.001168	0	0
WDR90	197335	broad.mit.edu	37	16	716508	716508	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:716508C>G	uc002cii.1	+	38	4848	c.4794C>G	c.(4792-4794)GAC>GAG	p.D1598E	WDR90_uc002cij.1_Intron|WDR90_uc002cil.1_RNA|WDR90_uc002cin.1_Missense_Mutation_p.D213E|WDR90_uc010uul.1_Intron|WDR90_uc002cio.1_Missense_Mutation_p.D197E|WDR90_uc010bqx.1_Intron|RHOT2_uc010uum.1_5'Flank|RHOT2_uc002cip.2_5'Flank|RHOT2_uc002ciq.2_5'Flank	NM_145294	NP_660337	Q96KV7	WDR90_HUMAN	WD repeat domain 90	1598	WD 20.									ovary(1)	1		Hepatocellular(780;0.0218)				CCAGTGGGGACCAGCGGGTCA	0.612			NA											7	49					0	0	0.00308	0	0
PTX4	390667	broad.mit.edu	37	16	1536062	1536062	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:1536062C>G	uc010uvf.1	-	3	1300	c.1300G>C	c.(1300-1302)GTT>CTT	p.V434L		NM_001013658	NP_001013680	Q96A99	PTX4_HUMAN	neuronal pentraxin II-like	439	Pentaxin.					extracellular region	metal ion binding				0						AGGTTTGCAACTTCCCCGGGA	0.622			NA											13	25					0	0	0.001855	0	0
OR1F2P	26184	broad.mit.edu	37	16	3265972	3265972	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:3265972G>A	uc010uwv.1	+	1	411	c.263G>A	c.(262-264)CGC>CAC	p.R88H		NR_002169				RecName: Full=Olfactory receptor 1F2; AltName: Full=OLFmf2;												0						GCCTATGACCGCTTTGTCGCC	0.512			NA											16	61					0	0	0.004007	0	0
MYH11	4629	broad.mit.edu	37	16	15797975	15797975	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:15797975C>T	uc002ddy.2	-	41	5899	c.5792G>A	c.(5791-5793)GGA>GAA	p.G1931E	MYH11_uc002ddv.2_3'UTR|MYH11_uc002ddw.2_3'UTR|MYH11_uc002ddx.2_Missense_Mutation_p.G1938E|MYH11_uc010bvg.2_3'UTR|NDE1_uc010uzy.1_Intron|NDE1_uc002dds.2_Intron	NM_002474	NP_002465	P35749	MYH11_HUMAN	smooth muscle myosin heavy chain 11 isoform	1931	Potential.				axon guidance|cardiac muscle fiber development|elastic fiber assembly|skeletal muscle myosin thick filament assembly|smooth muscle contraction	cytosol|melanosome|muscle myosin complex|myosin filament	actin binding|ATP binding|calmodulin binding|motor activity|structural constituent of muscle			ovary(6)|skin(3)|lung(2)|breast(2)|upper_aerodigestive_tract(1)|pancreas(1)	15						GGTCTCGTTTCCTCGCCTGTG	0.403			NA	T	CBFB	AML								21	151					0	0	0.010504	0	0
GTF3C1	2975	broad.mit.edu	37	16	27483125	27483125	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:27483125C>T	uc002dov.1	-	30	4510	c.4470G>A	c.(4468-4470)AAG>AAA	p.K1490K	GTF3C1_uc002dou.2_Silent_p.K1490K	NM_001520	NP_001511	Q12789	TF3C1_HUMAN	general transcription factor IIIC, polypeptide	1490						transcription factor TFIIIC complex	DNA binding|protein binding			ovary(2)|pancreas(1)|breast(1)|skin(1)	5						GGGCCCGGTTCTTCTTGGGGC	0.602			NA											4	107					0	0	0.001168	0	0
C16orf53	79447	broad.mit.edu	37	16	29830979	29830979	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:29830979G>A	uc002dug.3	+	3	988	c.669G>A	c.(667-669)AGG>AGA	p.R223R	uc002dtf.2_Intron|BOLA2_uc010bzb.1_Intron|uc002duh.1_Intron|MVP_uc010bzh.1_5'Flank|MVP_uc010vdz.1_5'Flank|MVP_uc002dui.2_5'Flank|MVP_uc002duj.2_5'Flank	NM_024516	NP_078792	Q9BTK6	PA1_HUMAN	PTIP-associated 1 protein	223											0						GTACCGGGAGGGACCTCTTCA	0.637			NA											29	161					0	0	0.00632	0	0
GPT2	84706	broad.mit.edu	37	16	46943706	46943706	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:46943706C>T	uc002eel.2	+	6	781	c.687C>T	c.(685-687)ATC>ATT	p.I229I	GPT2_uc002eem.2_Silent_p.I129I	NM_133443	NP_597700	Q8TD30	ALAT2_HUMAN	glutamic pyruvate transaminase 2 isoform 1	229					2-oxoglutarate metabolic process|cellular amino acid biosynthetic process|L-alanine metabolic process	mitochondrial matrix	L-alanine:2-oxoglutarate aminotransferase activity|pyridoxal phosphate binding			ovary(1)|skin(1)	2		all_cancers(37;0.0276)|all_epithelial(9;0.0498)|all_lung(18;0.0522)			L-Alanine(DB00160)|L-Glutamic Acid(DB00142)|Pyridoxal Phosphate(DB00114)	TCGACGCCATCCAGGTGAATT	0.577			NA											9	91					0	0	0.006214	0	0
IRX3	79191	broad.mit.edu	37	16	54319192	54319192	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr16:54319192C>T	uc002eht.1	-	2	1017	c.601G>A	c.(601-603)GAG>AAG	p.E201K		NM_024336	NP_077312	P78415	IRX3_HUMAN	iroquois homeobox 3	201	Asp/Glu-rich (acidic).				multicellular organismal development	nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity				0						TTTCCCTCCTCGTCAGTGCGG	0.473	GBM(143;1830 1866 4487 4646 37383)		NA											7	48					0	0	0.001984	0	0
P2RX1	5023	broad.mit.edu	37	17	3802231	3802231	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr17:3802231G>A	uc002fww.2	-	9	1404	c.963C>T	c.(961-963)GGC>GGT	p.G321G		NM_002558	NP_002549	P51575	P2RX1_HUMAN	purinergic receptor P2X1	321	Extracellular (Potential).				platelet activation	integral to plasma membrane	calcium channel activity|extracellular ATP-gated cation channel activity|purinergic nucleotide receptor activity			ovary(1)|skin(1)	2				LUAD - Lung adenocarcinoma(2;1.9e-05)|Lung(3;0.0173)		CACTCACCTTGCCGTCCACCA	0.537			NA											21	134					0	0	0.012319	0	0
RABEP1	9135	broad.mit.edu	37	17	5241393	5241393	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr17:5241393C>T	uc002gbm.3	+	5	832	c.608C>T	c.(607-609)ACA>ATA	p.T203I	RABEP1_uc010clc.1_Missense_Mutation_p.T203I|RABEP1_uc010cld.1_Missense_Mutation_p.T160I|RABEP1_uc010vsw.1_Missense_Mutation_p.T160I|RABEP1_uc002gbl.3_Missense_Mutation_p.T203I|RABEP1_uc002gbk.2_Missense_Mutation_p.T203I	NM_004703	NP_004694	Q15276	RABE1_HUMAN	rabaptin, RAB GTPase binding effector protein 1	203	Potential.				apoptosis|cellular membrane fusion|endocytosis|protein transport	centrosome|early endosome|endocytic vesicle|recycling endosome	growth factor activity|GTPase activator activity|protein homodimerization activity			large_intestine(1)|ovary(1)	2						GATAAACTGACAGAGGCTGAA	0.413			NA											18	108					0	0	0.008871	0	0
MYH2	4620	broad.mit.edu	37	17	10426900	10426900	+	Silent	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr17:10426900G>T	uc010coi.2	-	37	5513	c.5385C>A	c.(5383-5385)ACC>ACA	p.T1795T	uc002gml.1_Intron|MYH2_uc002gmp.3_Silent_p.T1795T|MYH2_uc010coj.2_Intron	NM_001100112	NP_001093582	Q9UKX2	MYH2_HUMAN	myosin heavy chain IIa	1795	Potential.				muscle filament sliding	muscle myosin complex|myosin filament|sarcomere	actin binding|ATP binding|calmodulin binding|microfilament motor activity|structural constituent of muscle			ovary(5)|pancreas(4)|skin(3)|lung(1)|kidney(1)	14						GATCCTTCACGGTCTGCTCCA	0.567			NA											6	117					8.12818e-05	9.49071e-05	0.001984	1	0
MYH3	4621	broad.mit.edu	37	17	10535214	10535214	+	Silent	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr17:10535214A>G	uc002gmq.1	-	34	5153	c.5076T>C	c.(5074-5076)ACT>ACC	p.T1692T		NM_002470	NP_002461	P11055	MYH3_HUMAN	myosin, heavy chain 3, skeletal muscle,	1692	Potential.				muscle filament sliding|muscle organ development	cytosol|myofibril|myosin filament	actin binding|ATP binding|calmodulin binding|microfilament motor activity			ovary(4)|central_nervous_system(2)|pancreas(1)	7						TCTGCTCCAGAGTAGCCCGCA	0.657			NA											4	53					0	0	0.009096	0	0
SYT4	6860	broad.mit.edu	37	18	40850335	40850335	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr18:40850335C>G	uc002law.2	-	4	1618	c.1249G>C	c.(1249-1251)GCC>CCC	p.A417P	SYT4_uc010dng.2_RNA|SYT4_uc010xcm.1_Missense_Mutation_p.A399P|SYT4_uc010dnh.2_RNA	NM_020783	NP_065834	Q9H2B2	SYT4_HUMAN	synaptotagmin IV	417	Cytoplasmic (Potential).					cell junction|integral to membrane|synaptic vesicle membrane	transporter activity			skin(5)	5						TGCCACTTGGCAATTTGTCTC	0.468	NSCLC(85;81 1419 2855 22820 35912)		NA											18	229					0	0	0.006122	0	0
SETBP1	26040	broad.mit.edu	37	18	42281721	42281721	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr18:42281721G>T	uc010dni.2	+	2	706	c.410G>T	c.(409-411)GGG>GTG	p.G137V	SETBP1_uc002lay.2_Missense_Mutation_p.G137V	NM_015559	NP_056374	Q9Y6X0	SETBP_HUMAN	SET binding protein 1 isoform a	137						nucleus	DNA binding			upper_aerodigestive_tract(2)|large_intestine(1)	3				Colorectal(1;0.0622)|COAD - Colon adenocarcinoma(74;0.201)		AAGCAGTCTGGGGACCAGAAG	0.463			NA							Schinzel-Giedion_syndrome				4	76					1.024e-07	1.2928e-07	0.000602	1	0
SERPINB13	5275	broad.mit.edu	37	18	61262278	61262278	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr18:61262278G>T	uc002ljc.2	+	7	799	c.631G>T	c.(631-633)GTA>TTA	p.V211L	SERPINB13_uc002ljd.2_Missense_Mutation_p.V75L|SERPINB13_uc010xep.1_Missense_Mutation_p.V220L|SERPINB13_uc010xeq.1_Missense_Mutation_p.V32L|SERPINB13_uc010xer.1_Missense_Mutation_p.V32L	NM_012397	NP_036529	Q9UIV8	SPB13_HUMAN	serine (or cysteine) proteinase inhibitor, clade	211					regulation of proteolysis|response to UV	cytoplasm|extracellular region	serine-type endopeptidase inhibitor activity			ovary(1)	1						AAGTAAATCTGTACAGATGAT	0.383			NA											23	73					9.62636e-23	1.34105e-22	0.014323	1	0
CALR	811	broad.mit.edu	37	19	13051264	13051264	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:13051264G>A	uc002mvu.2	+	5	780	c.700G>A	c.(700-702)GAG>AAG	p.E234K		NM_004343	NP_004334	P27797	CALR_HUMAN	calreticulin precursor	234	P-domain.|4 X approximate repeats.|1-3.				cell cycle arrest|cellular senescence|glucocorticoid receptor signaling pathway|negative regulation of neuron differentiation|negative regulation of retinoic acid receptor signaling pathway|negative regulation of steroid hormone receptor signaling pathway|negative regulation of transcription from RNA polymerase II promoter|negative regulation of translation|peptide antigen assembly with MHC class I protein complex|positive regulation of cell cycle|positive regulation of cell proliferation|positive regulation of DNA replication|positive regulation of phagocytosis|post-translational protein modification|protein export from nucleus|protein maturation by protein folding|protein N-linked glycosylation via asparagine|protein stabilization|regulation of apoptosis|sequestering of calcium ion	cytosol|endoplasmic reticulum lumen|extracellular space|MHC class I peptide loading complex|nucleus|perinuclear region of cytoplasm|polysome|proteinaceous extracellular matrix	androgen receptor binding|calcium ion binding|chaperone binding|complement component C1q binding|DNA binding|integrin binding|mRNA binding|protein binding involved in protein folding|sugar binding|ubiquitin protein ligase binding|unfolded protein binding|zinc ion binding			ovary(1)	1					Alteplase(DB00009)|Anistreplase(DB00029)|Antihemophilic Factor(DB00025)|Reteplase(DB00015)|Tenecteplase(DB00031)	CTCCAAGCCTGAGGTTGGTGT	0.552			NA											3	25					0	0	0.004672	0	0
PKN1	5585	broad.mit.edu	37	19	14569090	14569090	+	Missense_Mutation	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:14569090T>A	uc002myp.2	+	9	1490	c.1322T>A	c.(1321-1323)CTG>CAG	p.L441Q	PKN1_uc002myq.2_Missense_Mutation_p.L447Q	NM_002741	NP_002732	Q16512	PKN1_HUMAN	protein kinase N1 isoform 2	441	C2.				activation of JUN kinase activity|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor|transcription, DNA-dependent	endosome|nucleus|plasma membrane	androgen receptor binding|ATP binding|chromatin binding|GTP-Rho binding|histone binding|histone deacetylase binding|histone kinase activity (H3-T11 specific)|ligand-dependent nuclear receptor transcription coactivator activity|protein kinase C activity|protein kinase C binding|Rac GTPase binding			ovary(2)|breast(2)|skin(2)|large_intestine(1)|central_nervous_system(1)	8						CAGCGGGGCCTGTGTGCCCTC	0.602	NSCLC(185;2539 2965 10733 52867)		NA											4	53					0	0	0.009096	0	0
C19orf46	163183	broad.mit.edu	37	19	36496333	36496333	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:36496333C>A	uc002ocq.1	-	6	963	c.874G>T	c.(874-876)GAC>TAC	p.D292Y	C19orf46_uc002ocr.1_Missense_Mutation_p.R232I|C19orf46_uc002ocs.1_Missense_Mutation_p.D179Y|C19orf46_uc010een.1_Missense_Mutation_p.D207Y	NM_001039876	NP_001034965	Q8N205	SYNE4_HUMAN	hypothetical protein LOC163183	292	Cytoplasmic (Potential).				establishment of epithelial cell apical/basal polarity	integral to nuclear outer membrane	actin binding			ovary(1)	1	all_lung(56;1.35e-06)|Lung NSC(56;2.15e-06)|Esophageal squamous(110;0.162)		LUSC - Lung squamous cell carcinoma(66;0.06)			TGAGAGGTGTCTGCTTCCTGG	0.562			NA											4	47					0.00909568	0.00967014	0.009096	1	0
MAP4K1	11184	broad.mit.edu	37	19	39090623	39090623	+	Silent	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:39090623G>C	uc002oix.1	-	22	1719	c.1611C>G	c.(1609-1611)CTC>CTG	p.L537L	MAP4K1_uc002oiw.1_Silent_p.L124L|MAP4K1_uc002oiy.1_Silent_p.L537L|MAP4K1_uc010xug.1_Intron	NM_007181	NP_009112	Q92918	M4K1_HUMAN	mitogen-activated protein kinase kinase kinase	537	CNH.				activation of JUN kinase activity|peptidyl-serine phosphorylation		ATP binding|MAP kinase kinase kinase kinase activity|protein binding|small GTPase regulator activity			skin(4)|lung(3)|ovary(1)	8	all_cancers(60;6.42e-06)|Ovarian(47;0.103)		Lung(45;0.000751)|LUSC - Lung squamous cell carcinoma(53;0.00272)			GGCTAGGAAAGAGCTGCAGGG	0.592			NA											4	97					0	0	0.009096	0	0
AKT2	208	broad.mit.edu	37	19	40745995	40745995	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:40745995G>C	uc002onf.2	-	7	858	c.596C>G	c.(595-597)ACC>AGC	p.T199S	AKT2_uc010egs.2_Missense_Mutation_p.T199S|AKT2_uc010egt.2_Missense_Mutation_p.T137S|AKT2_uc010xvj.1_Missense_Mutation_p.T137S|AKT2_uc010egu.1_Missense_Mutation_p.T137S|AKT2_uc010xvk.1_Missense_Mutation_p.T199S|AKT2_uc002one.2_Missense_Mutation_p.T95S	NM_001626	NP_001617	P31751	AKT2_HUMAN	AKT2 kinase	199	Protein kinase.				insulin receptor signaling pathway|negative regulation of plasma membrane long-chain fatty acid transport|positive regulation of fatty acid beta-oxidation|positive regulation of glucose import|positive regulation of glycogen biosynthetic process	cytosol|nucleus	ATP binding|protein binding|protein serine/threonine kinase activity			lung(2)	2			Lung(22;0.000499)			CCGGCTCTCGGTGACTGTGTG	0.637			NA	A		ovarian|pancreatic 								26	221					0	0	0.00632	0	0
PSG8	440533	broad.mit.edu	37	19	43359837	43359837	+	Translation_Start_Site	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:43359837C>T	uc002oul.3	-	1	34	c.-65G>A	c.(-67--63)CCGTG>CCATG		PSG3_uc002ouf.2_Intron|PSG1_uc002oug.1_Intron|PSG11_uc002ouw.2_Intron|PSG7_uc002ous.1_Intron|PSG7_uc002out.1_Intron|PSG10_uc002ouv.1_Intron|PSG8_uc002oum.3_Translation_Start_Site|PSG1_uc002oun.2_Intron|PSG8_uc002oup.3_Translation_Start_Site|PSG10_uc010eip.2_RNA|PSG1_uc002our.1_Intron|PSG1_uc010eio.1_Intron|PSG1_uc002oux.1_Intron|PSG1_uc002ouy.1_Intron	NM_001130168	NP_001123640	Q9UQ74	PSG8_HUMAN	pregnancy specific beta-1-glycoprotein 8 isoform							extracellular region					0		Prostate(69;0.00899)				TTCCTGAGCACGGCTGTAGGC	0.607			NA											14	61					0	0	0.001855	0	0
NOVA2	4858	broad.mit.edu	37	19	46444058	46444058	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr19:46444058G>A	uc002pdv.2	-	4	590	c.542C>T	c.(541-543)ACG>ATG	p.T181M		NM_002516	NP_002507	Q9UNW9	NOVA2_HUMAN	neuro-oncological ventral antigen 2	181	KH 2.					nucleus	RNA binding				0		all_neural(266;0.113)|Ovarian(192;0.127)		OV - Ovarian serous cystadenocarcinoma(262;0.00245)|GBM - Glioblastoma multiforme(486;0.0782)|Epithelial(262;0.179)		GCCGCTGACCGTCACCACGCG	0.632			NA											3	31					0	0	0.004672	0	0
TRIM54	57159	broad.mit.edu	37	2	27505721	27505721	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:27505721C>T	uc002rjo.2	+	1	122	c.122C>T	c.(121-123)CCC>CTC	p.P41L	TRIM54_uc002rjn.2_Missense_Mutation_p.P41L	NM_187841	NP_912730	Q9BYV2	TRI54_HUMAN	ring finger protein 30 isoform 2	41	RING-type.				cell differentiation|microtubule-based process|multicellular organismal development|negative regulation of microtubule depolymerization	microtubule|sarcomere	signal transducer activity|zinc ion binding			ovary(1)	1	Acute lymphoblastic leukemia(172;0.155)|all_hematologic(175;0.215)					GTGATCCTGCCCTGCCAACAC	0.597			NA											22	281					0	0	0.00333	0	0
LTBP1	4052	broad.mit.edu	37	2	33500152	33500152	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:33500152G>T	uc002ros.2	+	17	2867	c.2867G>T	c.(2866-2868)TGC>TTC	p.C956F	LTBP1_uc002rot.2_Missense_Mutation_p.C630F|LTBP1_uc002rou.2_Missense_Mutation_p.C629F|LTBP1_uc002rov.2_Missense_Mutation_p.C576F|LTBP1_uc010ymz.1_Missense_Mutation_p.C629F|LTBP1_uc010yna.1_Missense_Mutation_p.C576F	NM_206943	NP_996826	Q14766	LTBP1_HUMAN	latent transforming growth factor beta binding	955	EGF-like 5; calcium-binding (Potential).				negative regulation of transforming growth factor beta receptor signaling pathway by extracellular sequestering of TGFbeta	proteinaceous extracellular matrix	calcium ion binding|growth factor binding|transforming growth factor beta receptor activity			ovary(3)|skin(2)|upper_aerodigestive_tract(1)|lung(1)|central_nervous_system(1)	8	all_hematologic(175;0.115)	Medulloblastoma(90;0.215)				GGTACTAACTGCATAGGTAAT	0.473			NA											4	81					1.23904e-05	1.4898e-05	0.000602	1	0
NRXN1	9378	broad.mit.edu	37	2	51255078	51255078	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:51255078C>T	uc010fbq.2	-	2	1811	c.334G>A	c.(334-336)GGC>AGC	p.G112S	NRXN1_uc002rxe.3_Missense_Mutation_p.G112S|NRXN1_uc002rxd.1_Missense_Mutation_p.G112S	NM_001135659	NP_001129131	P58400	NRX1B_HUMAN	neurexin 1 isoform alpha2 precursor	175	Extracellular (Potential).|Laminin G-like.				angiogenesis|neuron cell-cell adhesion|neuronal signal transduction	cell surface|endocytic vesicle|integral to membrane|presynaptic membrane	cell adhesion molecule binding|receptor binding			ovary(2)	2		all_hematologic(82;0.152)|Acute lymphoblastic leukemia(82;0.192)	Lung(47;0.0813)|LUSC - Lung squamous cell carcinoma(58;0.116)			TGCCAGGCGCCGTCGTTAACC	0.667			NA											4	31					0	0	0.009096	0	0
ANXA4	307	broad.mit.edu	37	2	70015217	70015217	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:70015217C>T	uc002sfr.3	+	3	268	c.41C>T	c.(40-42)TCA>TTA	p.S14L	ANXA4_uc010yqn.1_RNA|ANXA4_uc002sfs.3_Missense_Mutation_p.S14L|ANXA4_uc010yqo.1_Intron	NM_001153	NP_001144	P09525	ANXA4_HUMAN	annexin IV	12					anti-apoptosis|signal transduction	cytoplasm	calcium ion binding|calcium-dependent phospholipid binding|phospholipase inhibitor activity				0						AAAGCTGCTTCAGGATTCAAT	0.507			NA											4	50					0	0	0.000602	0	0
NAT8B	51471	broad.mit.edu	37	2	73928246	73928246	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:73928246C>A	uc002sjk.1	-	2	222	c.187G>T	c.(187-189)GCC>TCC	p.A63S		NM_016347	NP_057431	Q9UHF3	NAT8B_HUMAN	N-acetyltransferase 8B	63	N-acetyltransferase.|Helical; (Potential).				gastrulation with mouth forming second	integral to membrane	N-acetyltransferase activity				0						AACACGAGGGCCAGAATCCAG	0.577			NA											13	60					0.000151284	0.000173633	0.001855	1	0
TGFBRAP1	9392	broad.mit.edu	37	2	105924096	105924096	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:105924096G>A	uc002tcq.2	-	2	747	c.663C>T	c.(661-663)TTC>TTT	p.F221F	TGFBRAP1_uc002tcr.3_Silent_p.F221F	NM_004257	NP_004248	Q8WUH2	TGFA1_HUMAN	transforming growth factor, beta receptor	221	CNH.				regulation of transcription, DNA-dependent|transforming growth factor beta receptor signaling pathway	cytoplasm|membrane	SMAD binding|small GTPase regulator activity|transforming growth factor beta receptor binding			central_nervous_system(1)|skin(1)	2						CCGCCAGCAGGAACTCCTGTC	0.582	Esophageal Squamous(183;794 2019 9730 21801 48859)		NA											10	175					0	0	0.00499	0	0
ANAPC1	64682	broad.mit.edu	37	2	112608394	112608394	+	Missense_Mutation	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:112608394T>C	uc002thi.2	-	14	1856	c.1609A>G	c.(1609-1611)ACT>GCT	p.T537A		NM_022662	NP_073153	Q9H1A4	APC1_HUMAN	anaphase promoting complex subunit 1	537					anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process|cell division|mitosis|mitotic cell cycle spindle assembly checkpoint|negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle|protein K11-linked ubiquitination	anaphase-promoting complex|cytosol|nucleoplasm				skin(2)	2						GGCTTTGGAGTACTAACGCCA	0.433			NA											3	121					0	0	0.004672	0	0
KCNJ3	3760	broad.mit.edu	37	2	155711659	155711659	+	Nonsense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:155711659C>G	uc002tyv.1	+	3	1535	c.1340C>G	c.(1339-1341)TCA>TGA	p.S447*	KCNJ3_uc010zce.1_3'UTR	NM_002239	NP_002230	P48549	IRK3_HUMAN	potassium inwardly-rectifying channel J3	447	Cytoplasmic (By similarity).				synaptic transmission	voltage-gated potassium channel complex	G-protein activated inward rectifier potassium channel activity|protein binding			upper_aerodigestive_tract(1)|pancreas(1)	2					Halothane(DB01159)	CCGGGCAACTCAGAAGAAAAA	0.433			NA											4	55					0	0	0.009096	0	0
NOSTRIN	115677	broad.mit.edu	37	2	169717326	169717326	+	Missense_Mutation	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:169717326A>G	uc002ueg.2	+	14	1205	c.1201A>G	c.(1201-1203)AAA>GAA	p.K401E	NOSTRIN_uc002uef.2_Missense_Mutation_p.K458E|NOSTRIN_uc002uei.2_Missense_Mutation_p.K284E|NOSTRIN_uc010fpu.2_Missense_Mutation_p.K373E|NOSTRIN_uc002ueh.2_Missense_Mutation_p.K323E|NOSTRIN_uc002uej.2_Missense_Mutation_p.K284E|NOSTRIN_uc002uek.2_Missense_Mutation_p.K85E	NM_001039724	NP_001034813	Q8IVI9	NOSTN_HUMAN	nitric oxide synthase trafficker isoform 2	401					endocytosis|nitric oxide metabolic process|regulation of nitric-oxide synthase activity	cytoplasmic membrane-bounded vesicle|cytoskeleton|plasma membrane	protein binding				0						TAGCTATGTGAAAATATCTCG	0.363			NA											7	81					0	0	0.00308	0	0
ANKRD44	91526	broad.mit.edu	37	2	198051747	198051747	+	Silent	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:198051747C>A	uc002uuc.2	-	2	278	c.111G>T	c.(109-111)CTG>CTT	p.L37L	ANKRD44_uc002uua.1_Silent_p.L12L|ANKRD44_uc002uub.2_Silent_p.L37L|ANKRD44_uc010zgw.1_5'UTR|ANKRD44_uc002uud.1_Silent_p.L37L	NM_153697	NP_710181	Q8N8A2	ANR44_HUMAN	ankyrin repeat domain 44	37							protein binding			ovary(4)|skin(1)	5			OV - Ovarian serous cystadenocarcinoma(117;0.246)			TATCTCTTACCAGAGTATTCA	0.363			NA											13	200					3.27435e-08	4.1862e-08	0.00245	1	0
SGOL2	151246	broad.mit.edu	37	2	201407368	201407368	+	Missense_Mutation	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:201407368A>G	uc002uvw.2	+	5	567	c.454A>G	c.(454-456)ATG>GTG	p.M152V	SGOL2_uc002uvv.3_Missense_Mutation_p.M152V|SGOL2_uc010zhd.1_Missense_Mutation_p.M152V|SGOL2_uc010zhe.1_Missense_Mutation_p.M152V	NM_152524	NP_689737	Q562F6	SGOL2_HUMAN	shugoshin-like 2 isoform 1	152					cell division|mitotic prometaphase	condensed chromosome kinetochore|cytosol|mitotic cohesin complex	protein binding			ovary(2)|skin(2)	4						GTGCAAGTTGATGCGTCTTCC	0.318			NA											11	65					0	0	0.013537	0	0
SPEG	10290	broad.mit.edu	37	2	220337808	220337808	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:220337808G>A	uc010fwg.2	+	16	4137	c.4137G>A	c.(4135-4137)CTG>CTA	p.L1379L		NM_005876	NP_005867	Q15772	SPEG_HUMAN	SPEG complex locus	1379					muscle organ development|negative regulation of cell proliferation	nucleus	ATP binding|protein serine/threonine kinase activity			stomach(9)|ovary(4)|central_nervous_system(1)	14		Renal(207;0.0183)		Epithelial(149;4.5e-10)|all cancers(144;7.93e-08)|Lung(261;0.00639)|LUSC - Lung squamous cell carcinoma(224;0.00829)|READ - Rectum adenocarcinoma(5;0.163)		CTGTGCAGCTGCTGGAGCACG	0.662			NA											9	24					0	0	0.006214	0	0
ANKRD5	63926	broad.mit.edu	37	20	10030301	10030301	+	Missense_Mutation	SNP	G	G	T	rs142831233		TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:10030301G>T	uc002wno.2	+	7	1477	c.1084G>T	c.(1084-1086)GTG>TTG	p.V362L	uc002wnn.1_Intron|ANKRD5_uc002wnp.2_Missense_Mutation_p.V362L|ANKRD5_uc010gbz.2_Missense_Mutation_p.V173L	NM_022096	NP_071379	Q9NU02	ANKR5_HUMAN	ankyrin repeat domain protein 5	362	EF-hand.						calcium ion binding			ovary(1)|breast(1)	2						CTTCGTGATGGTGTTGGAGGA	0.512			NA											5	61					3.59834e-05	4.25067e-05	0.001168	1	0
BPIL3	128859	broad.mit.edu	37	20	31624311	31624311	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:31624311C>G	uc010zuc.1	+	7	638	c.638C>G	c.(637-639)ACC>AGC	p.T213S	BPIL3_uc010zud.1_Missense_Mutation_p.T152S	NM_174897	NP_777557	Q8NFQ5	BPIL3_HUMAN	bactericidal/permeability-increasing	213						extracellular region	lipid binding			ovary(1)|pancreas(1)	2						GCACCAGCCACCACAGCCAGC	0.577			NA											11	139					0	0	0.010729	0	0
KIAA1755	85449	broad.mit.edu	37	20	36856552	36856552	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:36856552G>A	uc002xhy.1	-	6	2234	c.1962C>T	c.(1960-1962)ACC>ACT	p.T654T	KIAA1755_uc002xhz.1_Silent_p.T654T	NM_001029864	NP_001025035	Q5JYT7	K1755_HUMAN	hypothetical protein LOC85449	654										ovary(4)|pancreas(1)	5		Myeloproliferative disorder(115;0.00874)				CACTCACCTGGGTGGCCTGCA	0.642			NA											9	41					0	0	0.004482	0	0
BPI	671	broad.mit.edu	37	20	36948635	36948635	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:36948635C>A	uc002xib.2	+	7	789	c.727C>A	c.(727-729)CCT>ACT	p.P243T		NM_001725	NP_001716	P17213	BPI_HUMAN	bactericidal/permeability-increasing protein	243	Cleavage sites for elastase (Potential).				defense response to bacterium|negative regulation of interleukin-6 production|negative regulation of interleukin-8 production|negative regulation of macrophage activation|negative regulation of tumor necrosis factor production	extracellular region|integral to plasma membrane	lipid binding|lipopolysaccharide binding			ovary(4)	4		Myeloproliferative disorder(115;0.00878)				TCTGGTGGCACCTCCAGCAAC	0.517			NA											6	40					0.000157383	0.000178604	0.00308	1	0
FAM83D	81610	broad.mit.edu	37	20	37570740	37570740	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:37570740G>T	uc002xjg.2	+	2	753	c.712G>T	c.(712-714)GAT>TAT	p.D238Y	FAM83D_uc002xjf.2_Missense_Mutation_p.D238Y	NM_030919	NP_112181	Q9H4H8	FA83D_HUMAN	hypothetical protein LOC81610	208					cell division|mitosis	cytoplasm|spindle pole				ovary(3)	3		Myeloproliferative disorder(115;0.00878)				TATGTGCATGGATCTGAAAGT	0.423			NA											21	131					1.10513e-12	1.47839e-12	0.014323	1	0
PABPC1L	80336	broad.mit.edu	37	20	43566779	43566779	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:43566779G>C	uc010ggv.1	+	13	1805	c.1723G>C	c.(1723-1725)GAC>CAC	p.D575H	PABPC1L_uc010zwq.1_RNA|PABPC1L_uc002xmv.2_RNA|PABPC1L_uc002xmw.2_Missense_Mutation_p.D129H|PABPC1L_uc002xmx.2_Missense_Mutation_p.D129H	NM_001124756	NP_001118228	Q4VXU2	PAP1L_HUMAN	poly(A)-binding protein, cytoplasmic 1-like	575	PABC.						nucleotide binding|RNA binding			ovary(1)	1						GCTGGAGATTGACAACTCAGA	0.587			NA											5	38					0	0	0.001168	0	0
STX16	8675	broad.mit.edu	37	20	57242593	57242593	+	Silent	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr20:57242593A>G	uc002xzi.2	+	3	927	c.192A>G	c.(190-192)CCA>CCG	p.P64P	STX16_uc010zzq.1_5'UTR|STX16_uc002xzk.2_Silent_p.P47P|STX16_uc002xzm.2_Silent_p.P60P|STX16_uc002xzj.2_Silent_p.P43P|STX16_uc002xzl.2_5'UTR	NM_001001433	NP_001001433	O14662	STX16_HUMAN	syntaxin 16 isoform a	64	Cytoplasmic (Potential).				intra-Golgi vesicle-mediated transport|intracellular protein transport|retrograde transport, endosome to Golgi	Golgi membrane|integral to membrane|microsome|SNARE complex	SNAP receptor activity			ovary(1)	1	all_lung(29;0.0175)		BRCA - Breast invasive adenocarcinoma(13;3.73e-09)|Epithelial(14;8.54e-06)|all cancers(14;6.89e-05)			GCTTAGATCCAGAAGCAGCGA	0.413			NA											7	74					0	0	0.004482	0	0
TPTE	7179	broad.mit.edu	37	21	10934993	10934993	+	Missense_Mutation	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr21:10934993A>T	uc002yip.1	-	15	1168	c.800T>A	c.(799-801)GTT>GAT	p.V267D	TPTE_uc002yis.1_RNA|TPTE_uc002yiq.1_Missense_Mutation_p.V249D|TPTE_uc002yir.1_Missense_Mutation_p.V229D|TPTE_uc010gkv.1_Missense_Mutation_p.V129D	NM_199261	NP_954870	P56180	TPTE_HUMAN	transmembrane phosphatase with tensin homology	267	Phosphatase tensin-type.				signal transduction	integral to membrane	ion channel activity|protein tyrosine phosphatase activity|protein tyrosine/serine/threonine phosphatase activity			ovary(2)|lung(1)|breast(1)|skin(1)	5			Colorectal(6;3.44e-05)|COAD - Colon adenocarcinoma(6;0.00727)|READ - Rectum adenocarcinoma(6;0.0723)	UCEC - Uterine corpus endometrioid carcinoma (6;0.0974)|all cancers(6;2.54e-22)|Epithelial(6;4.21e-19)|OV - Ovarian serous cystadenocarcinoma(6;1.16e-09)|BRCA - Breast invasive adenocarcinoma(6;7.72e-05)|Lung(8;0.000189)|LUSC - Lung squamous cell carcinoma(6;0.00379)|GBM - Glioblastoma multiforme(6;0.00391)|Kidney(17;0.0773)|LUAD - Lung adenocarcinoma(8;0.247)		AAACCGCACAACTTCCTAAAA	0.333			NA											5	104					0	0	0.000602	0	0
ITSN1	6453	broad.mit.edu	37	21	35208915	35208915	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr21:35208915G>C	uc002yta.1	+	29	3908	c.3640G>C	c.(3640-3642)GAC>CAC	p.D1214H	DONSON_uc002ysn.1_Intron|ITSN1_uc002yth.3_RNA|ITSN1_uc002ysz.2_Missense_Mutation_p.D1138H|ITSN1_uc010gmg.2_Missense_Mutation_p.D1101H|ITSN1_uc010gmh.2_RNA|ITSN1_uc002ysw.2_Missense_Mutation_p.D1214H|ITSN1_uc010gmi.2_Missense_Mutation_p.D1177H|ITSN1_uc010gmj.2_Missense_Mutation_p.D1093H|ITSN1_uc002ysy.2_Missense_Mutation_p.D1209H|ITSN1_uc002ysx.2_Missense_Mutation_p.D1172H|ITSN1_uc002ytb.1_Missense_Mutation_p.D1209H|ITSN1_uc002ytd.2_RNA|ITSN1_uc010gmk.2_Missense_Mutation_p.D1106H|ITSN1_uc010gml.2_RNA|ITSN1_uc002ytj.2_Missense_Mutation_p.D1209H|ITSN1_uc010gmm.1_RNA|ITSN1_uc002yte.2_Missense_Mutation_p.D1077H|ITSN1_uc002yti.1_RNA	NM_003024	NP_003015	Q15811	ITSN1_HUMAN	intersectin 1 isoform ITSN-l	1214	SH3 5.				apoptosis|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction|synaptic vesicle endocytosis	cell junction|coated pit|cytosol|lamellipodium|synapse|synaptosome	calcium ion binding|proline-rich region binding|protein complex scaffold|Rho guanyl-nucleotide exchange factor activity			ovary(3)|skin(1)	4						GCTGACCACAGACATGGACCC	0.522			NA											9	71					0	0	0.006214	0	0
LARGE	9215	broad.mit.edu	37	22	34157357	34157357	+	Splice_Site	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr22:34157357C>T	uc003and.3	-	3	685	c.106_splice	c.e3+1	p.D36_splice	LARGE_uc003ane.3_Splice_Site_p.D36_splice|LARGE_uc010gwp.2_Splice_Site_p.D36_splice|LARGE_uc011ame.1_Intron|LARGE_uc011amf.1_Splice_Site_p.D36_splice	NM_004737	NP_004728	O95461	LARGE_HUMAN	like-glycosyltransferase						glycosphingolipid biosynthetic process|muscle cell homeostasis|N-acetylglucosamine metabolic process|protein glycosylation	integral to Golgi membrane	acetylglucosaminyltransferase activity			ovary(1)|central_nervous_system(1)|skin(1)	3		Lung NSC(1;0.219)				TCCATTCTTACCTTCGAAGCT	0.468	Colon(70;397 1175 4573 19089 45288)		NA											8	128					0	0	0.010729	0	0
TCF20	6942	broad.mit.edu	37	22	42608568	42608568	+	Missense_Mutation	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr22:42608568A>T	uc003bcj.1	-	1	2878	c.2744T>A	c.(2743-2745)GTG>GAG	p.V915E	TCF20_uc003bck.1_Missense_Mutation_p.V915E|TCF20_uc003bnt.2_Missense_Mutation_p.V915E	NM_005650	NP_005641	Q9UGU0	TCF20_HUMAN	transcription factor 20 isoform 1	915					regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	DNA binding|transcription coactivator activity|zinc ion binding			ovary(4)|skin(1)	5						TTCCATGGACACCAAACCACC	0.463			NA											3	49					0	0	0.004672	0	0
ARPP21	10777	broad.mit.edu	37	3	35785425	35785425	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:35785425G>T	uc003cgb.2	+	18	2264	c.2000G>T	c.(1999-2001)AGT>ATT	p.S667I	ARPP21_uc003cga.2_Missense_Mutation_p.S648I|ARPP21_uc011axy.1_Missense_Mutation_p.S668I|ARPP21_uc003cgf.2_Missense_Mutation_p.S503I|ARPP21_uc003cgg.2_Missense_Mutation_p.S190I|uc011axz.1_5'Flank|MIR128-2_hsa-mir-128-2|MI0000727_5'Flank	NM_016300	NP_057384	Q9UBL0	ARP21_HUMAN	cyclic AMP-regulated phosphoprotein, 21 kD	667	Gln-rich.					cytoplasm	nucleic acid binding			ovary(2)|skin(1)	3						GCTCAGAGGAGTCAACAGATG	0.493			NA											8	94					5.18039e-06	6.30385e-06	0.00308	1	0
TNNC1	7134	broad.mit.edu	37	3	52486123	52486123	+	Silent	SNP	G	G	A	rs150881554	byFrequency	TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:52486123G>A	uc003deb.2	-	3	227	c.201C>T	c.(199-201)GAC>GAT	p.D67D		NM_003280	NP_003271	P63316	TNNC1_HUMAN	troponin C, slow	67	EF-hand 2.|1.				cardiac muscle contraction|muscle filament sliding|regulation of ATPase activity|regulation of muscle filament sliding speed|ventricular cardiac muscle tissue morphogenesis	cytosol|troponin complex	actin filament binding|calcium ion binding|calcium-dependent protein binding|protein homodimerization activity|troponin I binding|troponin T binding				0				BRCA - Breast invasive adenocarcinoma(193;1.69e-05)|Kidney(197;0.00175)|KIRC - Kidney renal clear cell carcinoma(197;0.00198)|OV - Ovarian serous cystadenocarcinoma(275;0.0525)	Bepridil(DB01244)|Dihydroxyaluminium(DB01375)|Levosimendan(DB00922)	GGGGCTCACCGTCCTCGTCCA	0.473			NA											23	119					0	0	0.00333	0	0
DPPA2	151871	broad.mit.edu	37	3	109023457	109023457	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:109023457C>T	uc003dxo.2	-	7	966	c.719G>A	c.(718-720)CGC>CAC	p.R240H		NM_138815	NP_620170	Q7Z7J5	DPPA2_HUMAN	developmental pluripotency associated 2	240						nucleus	nucleic acid binding			ovary(2)|upper_aerodigestive_tract(1)	3						AAACTGCAGGCGTACCCAACC	0.502			NA											13	61					0	0	0.001855	0	0
HEG1	57493	broad.mit.edu	37	3	124738228	124738228	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:124738228G>A	uc003ehs.3	-	5	1534	c.1466C>T	c.(1465-1467)TCA>TTA	p.S489L	HEG1_uc011bke.1_Missense_Mutation_p.S489L	NM_020733	NP_065784	Q9ULI3	HEG1_HUMAN	HEG homolog 1 precursor	489	Extracellular (Potential).|Ser-rich.					extracellular region|integral to membrane	calcium ion binding			ovary(2)	2						AGTAGAGTCTGAGAACTGGGT	0.463			NA											18	176					0	0	0.006122	0	0
HEG1	57493	broad.mit.edu	37	3	124738360	124738360	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:124738360G>A	uc003ehs.3	-	5	1402	c.1334C>T	c.(1333-1335)TCA>TTA	p.S445L	HEG1_uc011bke.1_Missense_Mutation_p.S445L	NM_020733	NP_065784	Q9ULI3	HEG1_HUMAN	HEG homolog 1 precursor	445	Extracellular (Potential).					extracellular region|integral to membrane	calcium ion binding			ovary(2)	2						GGGTGCGACTGACCTAGACAC	0.493			NA											13	201					0	0	0.001855	0	0
CCRL1	51554	broad.mit.edu	37	3	132319791	132319791	+	Missense_Mutation	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:132319791T>A	uc003eow.2	+	2	633	c.550T>A	c.(550-552)TGC>AGC	p.C184S	ACAD11_uc003eov.3_Intron|ACAD11_uc011blr.1_Intron|CCRL1_uc003eox.2_Missense_Mutation_p.C184S	NM_016557	NP_057641	Q9NPB9	CCRL1_HUMAN	chemokine (C-C motif) receptor-like 1	184	Extracellular (Potential).				chemotaxis|immune response	integral to plasma membrane	C-C chemokine receptor activity				0						CAATGCTAGGTGCATTCCCAT	0.433	Pancreas(96;1505 1524 4501 17831 18121)		NA											5	12					0	0	0.001168	0	0
NLGN1	22871	broad.mit.edu	37	3	173322869	173322869	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:173322869C>A	uc003fio.1	+	3	904	c.481C>A	c.(481-483)CCG>ACG	p.P161T	NLGN1_uc010hww.1_Missense_Mutation_p.P161T|NLGN1_uc003fip.1_Missense_Mutation_p.P161T	NM_014932	NP_055747	Q8N2Q7	NLGN1_HUMAN	neuroligin 1	161	Extracellular (Potential).				calcium-dependent cell-cell adhesion|neuron cell-cell adhesion|neuronal signal transduction|positive regulation of dendritic spine development|positive regulation of excitatory postsynaptic membrane potential|positive regulation of intracellular protein kinase cascade|positive regulation of synaptogenesis|protein targeting|regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity|regulation of N-methyl-D-aspartate selective glutamate receptor activity|synapse assembly|synaptic vesicle targeting	cell junction|cell surface|dendrite|integral to plasma membrane|postsynaptic density|postsynaptic membrane	cell adhesion molecule binding|neurexin binding|receptor activity			lung(2)|upper_aerodigestive_tract(1)|central_nervous_system(1)|skin(1)|ovary(1)|pancreas(1)	7	Ovarian(172;0.0025)		LUSC - Lung squamous cell carcinoma(14;5.36e-13)|Lung(28;9.49e-13)			TATATATGTCCCGACTGAGGA	0.338			NA											4	100					0.00909568	0.00967014	0.009096	1	0
EIF4G1	1981	broad.mit.edu	37	3	184049592	184049592	+	Missense_Mutation	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr3:184049592T>A	uc003fnp.2	+	31	4670	c.4472T>A	c.(4471-4473)ATT>AAT	p.I1491N	EIF4G1_uc003fnt.2_Missense_Mutation_p.I1202N|EIF4G1_uc003fnq.2_Missense_Mutation_p.I1404N|EIF4G1_uc003fnr.2_Missense_Mutation_p.I1327N|EIF4G1_uc010hxx.2_Missense_Mutation_p.I1498N|EIF4G1_uc003fns.2_Missense_Mutation_p.I1451N|EIF4G1_uc010hxy.2_Missense_Mutation_p.I1498N|EIF4G1_uc003fnv.3_Missense_Mutation_p.I1492N|EIF4G1_uc003fnu.3_Missense_Mutation_p.I1491N|EIF4G1_uc003fnw.2_Missense_Mutation_p.I1498N|EIF4G1_uc003fnx.2_Missense_Mutation_p.I1296N|EIF4G1_uc003fny.3_Missense_Mutation_p.I1295N|EIF4G1_uc003foa.2_Missense_Mutation_p.I163N	NM_198241	NP_937884	Q04637	IF4G1_HUMAN	eukaryotic translation initiation factor 4	1491	W2.|EIF4A-binding.				insulin receptor signaling pathway|interspecies interaction between organisms|nuclear-transcribed mRNA poly(A) tail shortening|regulation of translational initiation	cytosol|eukaryotic translation initiation factor 4F complex	protein binding|translation initiation factor activity			lung(2)|ovary(2)|upper_aerodigestive_tract(1)|large_intestine(1)|central_nervous_system(1)	7	all_cancers(143;1.06e-10)|Ovarian(172;0.0339)		Epithelial(37;1.53e-33)|OV - Ovarian serous cystadenocarcinoma(80;2.72e-22)			TATTCTGCAATTATTTGTAAG	0.537			NA											7	80					0	0	0.001984	0	0
MSX1	4487	broad.mit.edu	37	4	4864799	4864799	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:4864799G>A	uc003gif.2	+	2	1076	c.841G>A	c.(841-843)GCC>ACC	p.A281T		NM_002448	NP_002439	P28360	MSX1_HUMAN	msh homeobox 1	275					apoptotic nuclear change|face morphogenesis|negative regulation of cell growth|odontogenesis of dentine-containing tooth|positive regulation of apoptosis|protein localization to nucleus|protein stabilization	nucleus	p53 binding|sequence-specific DNA binding transcription factor activity				0				UCEC - Uterine corpus endometrioid carcinoma (64;0.163)		CTTCCAGCGCGCCGCGCTGCC	0.711			NA											3	31					0	0	0.004672	0	0
PDS5A	23244	broad.mit.edu	37	4	39871068	39871068	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:39871068C>G	uc003guv.3	-	22	2991	c.2451G>C	c.(2449-2451)AAG>AAC	p.K817N	PDS5A_uc010ifo.2_Missense_Mutation_p.K777N	NM_001100399	NP_001093869	Q29RF7	PDS5A_HUMAN	PDS5, regulator of cohesion maintenance, homolog	817					cell division|mitosis|negative regulation of DNA replication	chromatin|nucleus	identical protein binding				0						GTTTTCCATTCTTTTCACCTG	0.318			NA											14	188					0	0	0.004007	0	0
KIAA1211	57482	broad.mit.edu	37	4	57190403	57190403	+	Missense_Mutation	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:57190403A>T	uc003hbk.2	+	10	3903	c.3512A>T	c.(3511-3513)AAG>ATG	p.K1171M	KIAA1211_uc010iha.2_Missense_Mutation_p.K1164M	NM_020722	NP_065773	Q6ZU35	K1211_HUMAN	hypothetical protein LOC57482	1171										ovary(1)|skin(1)	2	Glioma(25;0.08)|all_neural(26;0.101)					CAGCTGAAAAAGGCCAATACT	0.507			NA											8	38					0	0	0.006214	0	0
UGT2B11	10720	broad.mit.edu	37	4	70066243	70066243	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:70066243G>T	uc003heh.2	-	6	1514	c.1505C>A	c.(1504-1506)GCA>GAA	p.A502E	uc003hei.1_RNA	NM_001073	NP_001064	O75310	UDB11_HUMAN	UDP glucuronosyltransferase 2 family,	502	Helical; (Potential).				estrogen metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|integral to membrane|microsome	glucuronosyltransferase activity			ovary(1)|haematopoietic_and_lymphoid_tissue(1)|skin(1)	3						TATCACAGTTGCCACACAGGC	0.438			NA											7	81					0.00198382	0.00215447	0.001984	1	0
UGT2B11	10720	broad.mit.edu	37	4	70079941	70079941	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:70079941C>T	uc003heh.2	-	1	509	c.500G>A	c.(499-501)CGG>CAG	p.R167Q	uc003hei.1_Intron	NM_001073	NP_001064	O75310	UDB11_HUMAN	UDP glucuronosyltransferase 2 family,	167					estrogen metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|integral to membrane|microsome	glucuronosyltransferase activity			ovary(1)|haematopoietic_and_lymphoid_tissue(1)|skin(1)	3						GTACACAAACCGTATGTTAAG	0.418			NA											5	33					0	0	0.000602	0	0
SHROOM3	57619	broad.mit.edu	37	4	77661433	77661433	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:77661433G>C	uc011cbx.1	+	5	3060	c.2107G>C	c.(2107-2109)GAC>CAC	p.D703H	SHROOM3_uc011cbz.1_Missense_Mutation_p.D527H|SHROOM3_uc003hkf.1_Missense_Mutation_p.D578H|SHROOM3_uc003hkg.2_Missense_Mutation_p.D481H	NM_020859	NP_065910	Q8TF72	SHRM3_HUMAN	shroom family member 3 protein	703					apical protein localization|cell morphogenesis|cellular pigment accumulation|pattern specification process|regulation of cell shape	adherens junction|apical junction complex|apical plasma membrane|cytoplasm|microtubule	actin binding			skin(2)|ovary(1)	3			Lung(101;0.0903)			CAAGGCAGAAGACCCTGGGAG	0.652			NA											4	141					0	0	0.009096	0	0
FRAS1	80144	broad.mit.edu	37	4	79366688	79366688	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:79366688G>C	uc003hlb.2	+	42	6118	c.5678G>C	c.(5677-5679)GGC>GCC	p.G1893A	FRAS1_uc003hkw.2_Missense_Mutation_p.G1893A|FRAS1_uc010ijj.1_Missense_Mutation_p.G313A	NM_025074	NP_079350	Q86XX4	FRAS1_HUMAN	Fraser syndrome 1	1892	CSPG 7.|Extracellular (Potential).				cell communication	integral to membrane|plasma membrane	metal ion binding			large_intestine(5)	5						GATCGTTTTGGCCCTGAAACT	0.413			NA											5	49					0	0	0.000602	0	0
RNF150	57484	broad.mit.edu	37	4	141888915	141888915	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:141888915G>T	uc003iio.1	-	2	1251	c.597C>A	c.(595-597)AAC>AAA	p.N199K	RNF150_uc010iok.1_Missense_Mutation_p.N199K|RNF150_uc003iip.1_Missense_Mutation_p.N199K	NM_020724	NP_065775	Q9ULK6	RN150_HUMAN	ring finger protein 150 precursor	199	Extracellular (Potential).					integral to membrane	zinc ion binding			ovary(1)	1	all_hematologic(180;0.162)					ATTTCTGCAAGTTCCGGGTTC	0.468			NA											15	89					2.5808e-16	3.47547e-16	0.006122	1	0
GYPA	2993	broad.mit.edu	37	4	145039892	145039892	+	Silent	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:145039892T>C	uc003ijo.3	-	4	362	c.246A>G	c.(244-246)CAA>CAG	p.Q82Q	GYPA_uc003ijn.2_Silent_p.Q82Q|GYPA_uc011cia.1_RNA|GYPA_uc011cib.1_Silent_p.Q49Q|GYPA_uc003ijp.3_Silent_p.Q50Q|GYPA_uc010ioq.2_Intron|GYPA_uc010ior.2_Silent_p.Q17Q|GYPA_uc010ios.1_Intron	NM_002099	NP_002090	P02724	GLPA_HUMAN	glycophorin A precursor	82	Extracellular.		Q -> K (in ENAV/MARS antigen).		interspecies interaction between organisms	membrane fraction	receptor activity			central_nervous_system(2)	2	all_hematologic(180;0.15)					GATGGGCAAGTTGTACCCTTT	0.323			NA											16	68					0	0	0.003163	0	0
SH3D19	152503	broad.mit.edu	37	4	152095909	152095909	+	Missense_Mutation	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:152095909T>C	uc010ipl.1	-	7	1697	c.607A>G	c.(607-609)ATC>GTC	p.I203V	SH3D19_uc003imc.2_Missense_Mutation_p.I203V|SH3D19_uc003ime.2_Missense_Mutation_p.I203V|SH3D19_uc010ipm.2_Missense_Mutation_p.I203V	NM_001009555	NP_001009555	Q5HYK7	SH319_HUMAN	SH3 domain containing 19 isoform a	203	Pro-rich.				cellular membrane organization|positive regulation of membrane protein ectodomain proteolysis|post-Golgi vesicle-mediated transport	cytosol|Golgi apparatus|nucleus|plasma membrane	proline-rich region binding			ovary(1)|skin(1)	2	all_hematologic(180;0.093)	Acute lymphoblastic leukemia(8;0.138)				ATGAGATCGATGTCCACCAAG	0.527			NA											6	351					0	0	0.001168	0	0
TKTL2	84076	broad.mit.edu	37	4	164394375	164394375	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:164394375G>A	uc003iqp.3	-	1	673	c.512C>T	c.(511-513)GCC>GTC	p.A171V		NM_032136	NP_115512	Q9H0I9	TKTL2_HUMAN	transketolase-like 2	171						cytoplasm	metal ion binding|transketolase activity			ovary(2)|skin(2)|pancreas(1)	5	all_hematologic(180;0.166)	Prostate(90;0.0959)|all_neural(102;0.223)				GTAGTGGGAGGCAAAAGCAAA	0.552			NA											20	61					0	0	0.010504	0	0
Unknown	0	broad.mit.edu	37	4	165980473	165980473	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:165980473C>A	uc011cjl.1	+	1	174	c.174C>A	c.(172-174)CAC>CAA	p.H58Q		NM_001105575	NP_001099045			tripartite motif-containing 75												NA						TCTGTCGTCACCAGTGTCAAG	0.522			NA											3	22					0.004672	0.00501991	0.004672	1	0
TLL1	7092	broad.mit.edu	37	4	167020587	167020587	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:167020587G>C	uc003irh.1	+	20	3462	c.2815G>C	c.(2815-2817)GAG>CAG	p.E939Q	TLL1_uc011cjn.1_Missense_Mutation_p.E962Q|TLL1_uc011cjo.1_Missense_Mutation_p.E763Q	NM_012464	NP_036596	O43897	TLL1_HUMAN	tolloid-like 1 precursor	939	CUB 5.				cell differentiation|proteolysis|skeletal system development	extracellular region	calcium ion binding|metalloendopeptidase activity|zinc ion binding			skin(3)|ovary(2)|breast(1)|central_nervous_system(1)	7	all_hematologic(180;0.221)	Melanoma(52;0.0315)|Prostate(90;0.0405)		GBM - Glioblastoma multiforme(119;0.103)		ATTTGAAGTGGAGGAAGAAGC	0.463			NA											24	129					0	0	0.00333	0	0
FAT1	2195	broad.mit.edu	37	4	187539532	187539532	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:187539532G>C	uc003izf.2	-	10	8396	c.8208C>G	c.(8206-8208)AGC>AGG	p.S2736R		NM_005245	NP_005236	Q14517	FAT1_HUMAN	FAT tumor suppressor 1 precursor	2736	Extracellular (Potential).|Cadherin 25.				actin filament organization|anatomical structure morphogenesis|cell migration|cell-cell signaling|establishment or maintenance of cell polarity|homophilic cell adhesion	cell-cell junction|integral to plasma membrane|nucleus|perinuclear region of cytoplasm	calcium ion binding|protein binding			ovary(10)|central_nervous_system(1)|pancreas(1)	12						CTTTGACCAGGCTGTAAAGAA	0.448	Colon(197;1040 2055 4143 4984 49344)		NA								HNSCC(5;0.00058)			10	173					0	0	0.013537	0	0
TRIML1	339976	broad.mit.edu	37	4	189063534	189063534	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr4:189063534G>A	uc003izm.1	+	3	748	c.633G>A	c.(631-633)CTG>CTA	p.L211L	TRIML1_uc003izn.1_5'Flank	NM_178556	NP_848651	Q8N9V2	TRIML_HUMAN	tripartite motif family-like 1	211	Potential.				multicellular organismal development		ligase activity|zinc ion binding			ovary(1)|pancreas(1)|breast(1)|skin(1)	4		all_cancers(14;1.33e-43)|all_epithelial(14;7.86e-31)|all_lung(41;4.3e-13)|Lung NSC(41;9.69e-13)|Melanoma(20;7.86e-05)|Breast(6;0.000148)|Hepatocellular(41;0.0218)|Renal(120;0.0376)|Prostate(90;0.0513)|all_hematologic(60;0.062)		OV - Ovarian serous cystadenocarcinoma(60;1.52e-11)|BRCA - Breast invasive adenocarcinoma(30;4.19e-06)|GBM - Glioblastoma multiforme(59;0.000232)|STAD - Stomach adenocarcinoma(60;0.000279)|LUSC - Lung squamous cell carcinoma(40;0.00902)|READ - Rectum adenocarcinoma(43;0.156)		TGAGGAAGCTGAGGAACAATG	0.448	Melanoma(31;213 1036 16579 23968 32372)		NA											7	59					0	0	0.001984	0	0
ADAMTS16	170690	broad.mit.edu	37	5	5237160	5237160	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:5237160G>A	uc003jdl.2	+	14	2240	c.2102G>A	c.(2101-2103)GGG>GAG	p.G701E	ADAMTS16_uc003jdk.1_Missense_Mutation_p.G701E|ADAMTS16_uc010itk.1_Intron	NM_139056	NP_620687	Q8TE57	ATS16_HUMAN	ADAM metallopeptidase with thrombospondin type 1	701	Cys-rich.				proteolysis	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding			ovary(3)|lung(2)|large_intestine(1)|breast(1)|pancreas(1)	8						GTCAAAGATGGGACTCCATGC	0.308			NA											8	165					0	0	0.004482	0	0
CDH18	1016	broad.mit.edu	37	5	19473694	19473694	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:19473694C>T	uc003jgc.2	-	12	2391	c.2014G>A	c.(2014-2016)GAC>AAC	p.D672N	CDH18_uc003jgd.2_Missense_Mutation_p.D672N|CDH18_uc011cnm.1_3'UTR	NM_004934	NP_004925	Q13634	CAD18_HUMAN	cadherin 18, type 2 preproprotein	672	Cytoplasmic (Potential).				adherens junction organization|cell junction assembly|homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			ovary(5)|large_intestine(1)|skin(1)	7	Lung NSC(1;0.00734)|all_lung(1;0.0197)					GCTGTGATGTCAAAGGCCTCT	0.507			NA											9	102					0	0	0.004482	0	0
OSMR	9180	broad.mit.edu	37	5	38885462	38885462	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:38885462G>A	uc003jln.1	+	6	1082	c.715G>A	c.(715-717)GAG>AAG	p.E239K	OSMR_uc003jlm.1_Missense_Mutation_p.E239K	NM_003999	NP_003990	Q99650	OSMR_HUMAN	oncostatin M receptor precursor	239	Extracellular (Potential).				cell proliferation|positive regulation of cell proliferation	oncostatin-M receptor complex	growth factor binding|oncostatin-M receptor activity			ovary(2)|pancreas(1)|central_nervous_system(1)|skin(1)	5	all_lung(31;0.000365)					AGTACTTGAGGAGCCCAAGGA	0.443			NA											7	69					0	0	0.001984	0	0
C7	730	broad.mit.edu	37	5	40979944	40979944	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:40979944C>A	uc003jmh.2	+	17	2397	c.2283C>A	c.(2281-2283)GAC>GAA	p.D761E	C7_uc011cpn.1_RNA	NM_000587	NP_000578	P10643	CO7_HUMAN	complement component 7 precursor	761	Complement control factor I module 1.				complement activation, alternative pathway|complement activation, classical pathway|cytolysis	extracellular region|membrane attack complex					0		Ovarian(839;0.0112)				CTGGTAGGGACAGCTGTACTC	0.473			NA											3	45					0.004672	0.00501991	0.004672	1	0
PARP8	79668	broad.mit.edu	37	5	50090157	50090157	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:50090157C>T	uc003jon.3	+	12	1036	c.854C>T	c.(853-855)ACT>ATT	p.T285I	PARP8_uc011cpz.1_Missense_Mutation_p.T177I|PARP8_uc003joo.2_Missense_Mutation_p.T285I|PARP8_uc003jop.2_Missense_Mutation_p.T285I	NM_024615	NP_078891	Q8N3A8	PARP8_HUMAN	poly (ADP-ribose) polymerase family, member 8	285						intracellular	NAD+ ADP-ribosyltransferase activity			lung(3)|large_intestine(1)|ovary(1)	5		Lung NSC(810;0.0305)|Breast(144;0.222)				TTATTTTCTACTTTGCGCAGG	0.403			NA											12	93					0	0	0.010729	0	0
CMYA5	202333	broad.mit.edu	37	5	79030763	79030763	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:79030763C>A	uc003kgc.2	+	2	6247	c.6175C>A	c.(6175-6177)CAG>AAG	p.Q2059K		NM_153610	NP_705838	Q8N3K9	CMYA5_HUMAN	cardiomyopathy associated 5	2059						perinuclear region of cytoplasm				ovary(6)|pancreas(2)|lung(1)	9		Lung NSC(167;0.00296)|all_lung(232;0.00327)|Ovarian(174;0.0262)		OV - Ovarian serous cystadenocarcinoma(54;9.85e-46)|Epithelial(54;3.38e-40)|all cancers(79;3.43e-35)		ATCAGTGGAACAGGTGAAGTC	0.463			NA											20	98					0.000132079	0.000153333	0.008871	1	0
SLCO6A1	133482	broad.mit.edu	37	5	101726745	101726745	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:101726745C>A	uc003knn.2	-	11	1991	c.1819G>T	c.(1819-1821)GTA>TTA	p.V607L	SLCO6A1_uc003kno.2_Missense_Mutation_p.V354L|SLCO6A1_uc003knp.2_Missense_Mutation_p.V607L|SLCO6A1_uc003knq.2_Missense_Mutation_p.V545L	NM_173488	NP_775759	Q86UG4	SO6A1_HUMAN	solute carrier organic anion transporter family,	607	Cytoplasmic (Potential).					integral to membrane|plasma membrane	transporter activity			ovary(3)|skin(3)|central_nervous_system(1)	7		all_cancers(142;8e-09)|all_epithelial(76;2.83e-12)|Prostate(80;0.00125)|Colorectal(57;0.00342)|Ovarian(225;0.024)|Lung NSC(167;0.0259)|all_lung(232;0.0323)		Epithelial(69;1.47e-15)|COAD - Colon adenocarcinoma(37;0.0113)		TTGTCAGGTACAACCCTGAAA	0.338			NA											16	62					2.35188e-11	3.1051e-11	0.006122	1	0
PPIP5K2	23262	broad.mit.edu	37	5	102494220	102494220	+	Silent	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:102494220C>G	uc003kod.3	+	16	2199	c.1680C>G	c.(1678-1680)CTC>CTG	p.L560L	PPIP5K2_uc011cva.1_RNA|PPIP5K2_uc003koe.2_Silent_p.L560L	NM_015216	NP_056031	O43314	VIP2_HUMAN	Histidine acid phosphatase domain containing 1	560					inositol metabolic process	cytosol	acid phosphatase activity|ATP binding|diphosphoinositol-pentakisphosphate kinase activity|inositol 1,3,4,5,6-pentakisphosphate kinase activity|inositol hexakisphosphate 5-kinase activity			ovary(1)|skin(1)	2						GACATGACCTCAAAATATATG	0.328			NA											11	80					0	0	0.013537	0	0
FBN2	2201	broad.mit.edu	37	5	127728883	127728883	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:127728883G>A	uc003kuu.2	-	10	1849	c.1410C>T	c.(1408-1410)GGC>GGT	p.G470G	FBN2_uc003kuv.2_Silent_p.G437G	NM_001999	NP_001990	P35556	FBN2_HUMAN	fibrillin 2 precursor	470					bone trabecula formation|negative regulation of transforming growth factor beta receptor signaling pathway by extracellular sequestering of TGFbeta|positive regulation of bone mineralization|positive regulation of osteoblast differentiation	microfibril	calcium ion binding|extracellular matrix structural constituent			ovary(8)|large_intestine(4)|pancreas(1)|kidney(1)|skin(1)	15		all_cancers(142;0.0216)|Prostate(80;0.0551)	KIRC - Kidney renal clear cell carcinoma(527;0.0268)|Kidney(363;0.0488)	OV - Ovarian serous cystadenocarcinoma(64;0.0821)|Epithelial(69;0.146)		CTCCCCCAACGCCAGGAGAAA	0.577			NA											10	112					0	0	0.008291	0	0
ADAMTS19	171019	broad.mit.edu	37	5	128983511	128983511	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:128983511C>T	uc003kvb.1	+	12	1908	c.1908C>T	c.(1906-1908)GCC>GCT	p.A636A	ADAMTS19_uc010jdh.1_RNA	NM_133638	NP_598377	Q8TE59	ATS19_HUMAN	ADAM metallopeptidase with thrombospondin type 1	636	TSP type-1 1.				proteolysis	proteinaceous extracellular matrix	metalloendopeptidase activity|zinc ion binding			ovary(5)|breast(2)|lung(1)|skin(1)	9		all_cancers(142;0.0148)|Prostate(80;0.0494)|Breast(839;0.238)	KIRC - Kidney renal clear cell carcinoma(527;0.0186)|Kidney(363;0.0365)	OV - Ovarian serous cystadenocarcinoma(64;0.222)		AACATCTGGCCGGAGAGTGGA	0.517			NA											8	118					0	0	0.004482	0	0
PCDHA12	56137	broad.mit.edu	37	5	140257174	140257174	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:140257174C>T	uc003lic.2	+	1	2244	c.2117C>T	c.(2116-2118)GCG>GTG	p.A706V	PCDHA1_uc003lha.2_Intron|PCDHA1_uc003lhb.2_Intron|PCDHA2_uc003lhd.2_Intron|PCDHA3_uc003lhf.2_Intron|PCDHA4_uc003lhi.2_Intron|PCDHA4_uc003lhh.1_Intron|PCDHA5_uc003lhk.1_Intron|PCDHA5_uc003lhl.2_Intron|PCDHA6_uc003lhn.2_Intron|PCDHA6_uc003lho.2_Intron|PCDHA7_uc003lhq.2_Intron|PCDHA8_uc003lhs.2_Intron|PCDHA9_uc003lhu.2_Intron|PCDHA10_uc003lhw.2_Intron|PCDHA10_uc003lhx.2_Intron|PCDHA11_uc003lia.2_Intron|PCDHA12_uc011daf.1_Missense_Mutation_p.A706V	NM_018903	NP_061726	Q9UN75	PCDAC_HUMAN	protocadherin alpha 12 isoform 1 precursor	706	Helical; (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding|protein binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GCCATCTGTGCGGTGTCCAGC	0.672	Pancreas(113;759 1672 13322 24104 50104)		NA											7	46					0	0	0.004482	0	0
PCDHGA2	56113	broad.mit.edu	37	5	140720634	140720634	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:140720634C>T	uc003ljk.1	+	1	2281	c.2096C>T	c.(2095-2097)GCG>GTG	p.A699V	PCDHGA1_uc003lji.1_Intron|PCDHGA3_uc003ljm.1_5'Flank|PCDHGA3_uc010jfx.1_5'Flank|PCDHGA2_uc011dao.1_Missense_Mutation_p.A699V|PCDHGA3_uc011dap.1_5'Flank	NM_018915	NP_061738	Q9Y5H1	PCDG2_HUMAN	protocadherin gamma subfamily A, 2 isoform 1	699	Helical; (Potential).				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			skin(2)|ovary(1)	3			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			GCGGTGGCCGCGGTCTCCTGC	0.662			NA											18	138					0	0	0.010504	0	0
PCDHGB6	56100	broad.mit.edu	37	5	140788222	140788222	+	Silent	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:140788222A>T	uc003lkj.1	+	1	453	c.453A>T	c.(451-453)CGA>CGT	p.R151R	PCDHGA1_uc003lji.1_Intron|PCDHGA2_uc003ljk.1_Intron|PCDHGA3_uc003ljm.1_Intron|PCDHGA3_uc010jfx.1_Intron|PCDHGB1_uc003ljo.1_Intron|PCDHGA4_uc003ljq.1_Intron|PCDHGB2_uc003ljs.1_Intron|PCDHGA5_uc003lju.1_Intron|PCDHGB3_uc003ljw.1_Intron|PCDHGA6_uc003ljy.1_Intron|PCDHGA7_uc003lka.1_Intron|PCDHGB4_uc003lkc.1_Intron|PCDHGA8_uc003lkd.1_Intron|PCDHGB5_uc003lkf.1_Intron|PCDHGA9_uc003lkh.1_Intron|PCDHGB6_uc003lki.1_Silent_p.R151R	NM_018926	NP_061749	Q9Y5F9	PCDGI_HUMAN	protocadherin gamma subfamily B, 6 isoform 1	151	Extracellular (Potential).|Cadherin 2.				homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding				0			KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			CTGGTACACGACTATCGCTTG	0.348			NA											11	52					0	0	0.013537	0	0
ODZ2	57451	broad.mit.edu	37	5	167674048	167674048	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:167674048G>T	uc010jjd.2	+	27	6077	c.6077G>T	c.(6076-6078)AGT>ATT	p.S2026I	ODZ2_uc003lzr.3_Missense_Mutation_p.S1796I|ODZ2_uc003lzt.3_Missense_Mutation_p.S1399I|ODZ2_uc010jje.2_Missense_Mutation_p.S1290I	NM_001122679	NP_001116151			odz, odd Oz/ten-m homolog 2											ovary(6)|central_nervous_system(4)	10	Renal(175;0.00124)|Lung NSC(126;0.136)|all_lung(126;0.242)	Medulloblastoma(196;0.0241)|all_neural(177;0.026)	Kidney(164;7.53e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000525)	all cancers(165;0.0444)|OV - Ovarian serous cystadenocarcinoma(192;0.0694)|Epithelial(171;0.124)		GTCTACGACAGTACCGCCGTC	0.532			NA											12	110					4.3838e-07	5.46622e-07	0.001855	1	0
SLC34A1	6569	broad.mit.edu	37	5	176825194	176825194	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:176825194G>A	uc003mgk.3	+	13	1928	c.1827G>A	c.(1825-1827)CCG>CCA	p.P609P		NM_003052	NP_003043	Q06495	NPT2A_HUMAN	solute carrier family 34 (sodium phosphate),	609	Cytoplasmic (Potential).				phosphate ion homeostasis|response to cadmium ion|response to lead ion|response to mercury ion|sodium ion transport	brush border membrane|integral to plasma membrane	protein binding|sodium-dependent phosphate transmembrane transporter activity|symporter activity			ovary(1)	1	all_cancers(89;2.04e-05)|Renal(175;0.000269)|Lung NSC(126;0.000832)|all_lung(126;0.00152)	all_neural(177;0.00409)|Medulloblastoma(196;0.00498)|all_hematologic(541;0.21)	Kidney(164;2.23e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000178)			GCTCACCCCCGCTGCCCCCCA	0.687			NA											4	41					0	0	0.000602	0	0
FOXC1	2296	broad.mit.edu	37	6	1611205	1611205	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:1611205G>A	uc003mtp.2	+	1	525	c.525G>A	c.(523-525)AAG>AAA	p.K175K		NM_001453	NP_001444	Q12948	FOXC1_HUMAN	forkhead box C1	175					anti-apoptosis|artery morphogenesis|blood vessel remodeling|brain development|camera-type eye development|cardiac muscle cell proliferation|collagen fibril organization|embryonic heart tube development|germ cell migration|glycosaminoglycan metabolic process|lacrimal gland development|lymphangiogenesis|metanephros development|negative regulation of mitotic cell cycle|neural crest cell fate commitment|Notch signaling pathway|odontogenesis of dentine-containing tooth|ossification|ovarian follicle development|paraxial mesodermal cell fate commitment|positive regulation of transcription from RNA polymerase II promoter|regulation of blood vessel size|regulation of organ growth|regulation of sequence-specific DNA binding transcription factor activity|somitogenesis|ureteric bud development|vascular endothelial growth factor receptor signaling pathway|vasculogenesis|ventricular cardiac muscle tissue morphogenesis	nuclear heterochromatin|transcription factor complex	chromatin DNA binding|DNA bending activity|double-stranded DNA binding|promoter binding|sequence-specific DNA binding|sequence-specific enhancer binding RNA polymerase II transcription factor activity|specific RNA polymerase II transcription factor activity|specific transcriptional repressor activity|transcription activator activity|transcription factor binding|transcription regulatory region DNA binding			ovary(1)	1	Ovarian(93;0.0733)	all_cancers(2;4.45e-07)|all_epithelial(2;4.33e-05)|all_lung(73;0.0713)|all_hematologic(90;0.0895)		Epithelial(2;0.0904)|OV - Ovarian serous cystadenocarcinoma(45;0.095)|all cancers(2;0.168)		GGCGCTTCAAGAAGAAGGACG	0.493	Pancreas(133;719 1821 3197 26645 35015)		NA											6	25					0	0	0.001168	0	0
SYCP2L	221711	broad.mit.edu	37	6	10959066	10959066	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:10959066C>A	uc003mzo.2	+	26	2509	c.2213C>A	c.(2212-2214)CCG>CAG	p.P738Q	SYCP2L_uc010jow.2_Missense_Mutation_p.P358Q	NM_001040274	NP_001035364	Q5T4T6	SYC2L_HUMAN	synaptonemal complex protein 2-like	738						nucleus				ovary(1)|skin(1)	2	Breast(50;0.0838)|Ovarian(93;0.107)	all_hematologic(90;0.135)	Epithelial(50;0.239)			AAGAAAGCACCGGATTGCCTA	0.343			NA											12	59					2.31682e-05	2.76922e-05	0.003163	1	0
GTPBP2	54676	broad.mit.edu	37	6	43592282	43592282	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:43592282G>A	uc003ovs.2	-	7	1102	c.1065C>T	c.(1063-1065)GCC>GCT	p.A355A	GTPBP2_uc010jyv.2_Silent_p.A267A|GTPBP2_uc003ovt.1_Silent_p.A355A	NM_019096	NP_061969	Q9BX10	GTPB2_HUMAN	GTP binding protein 2	355							GTP binding|GTPase activity			liver(1)|skin(1)	2	all_cancers(18;9.36e-06)|Lung NSC(15;0.00161)|all_lung(25;0.004)		all cancers(41;0.000501)|Colorectal(64;0.00245)|COAD - Colon adenocarcinoma(64;0.00536)|STAD - Stomach adenocarcinoma(11;0.0826)|OV - Ovarian serous cystadenocarcinoma(102;0.167)			CAGCAGTGACGGCATCATCCT	0.602	GBM(116;405 1620 28302 32150 44768)		NA											11	44					0	0	0.013537	0	0
PKHD1	5314	broad.mit.edu	37	6	51908488	51908488	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:51908488C>A	uc003pah.1	-	26	3032	c.2756G>T	c.(2755-2757)GGT>GTT	p.G919V	PKHD1_uc003pai.2_Missense_Mutation_p.G919V	NM_138694	NP_619639	P08F94	PKHD1_HUMAN	fibrocystin isoform 1	919	Extracellular (Potential).				cell-cell adhesion|cilium assembly|homeostatic process|kidney development|negative regulation of cellular component movement	anchored to external side of plasma membrane|apical plasma membrane|integral to membrane|microtubule basal body	protein binding|receptor activity			lung(15)|ovary(15)|large_intestine(5)|central_nervous_system(3)|skin(3)|breast(2)|upper_aerodigestive_tract(1)	44	Lung NSC(77;0.0605)					AGAGCAGGAACCTGGGCAATG	0.443			NA											8	33					0.000274275	0.000307798	0.004482	1	0
MDN1	23195	broad.mit.edu	37	6	90365610	90365610	+	Silent	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:90365610C>G	uc003pnn.1	-	92	15479	c.15363G>C	c.(15361-15363)CTG>CTC	p.L5121L		NM_014611	NP_055426	Q9NU22	MDN1_HUMAN	MDN1, midasin homolog	5121					protein complex assembly|regulation of protein complex assembly	nucleus	ATP binding|ATPase activity|unfolded protein binding			ovary(8)|skin(2)	10		all_cancers(76;1.47e-06)|Acute lymphoblastic leukemia(125;2.23e-10)|Prostate(29;5.55e-10)|all_hematologic(105;2.42e-06)|all_epithelial(107;0.00246)		BRCA - Breast invasive adenocarcinoma(108;0.0193)		CCACAGTCCTCAGCCTCTTGT	0.507			NA											6	59					0	0	0.001984	0	0
CASP8AP2	9994	broad.mit.edu	37	6	90573714	90573714	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:90573714C>T	uc003pnr.2	+	7	2482	c.2286C>T	c.(2284-2286)AGC>AGT	p.S762S	CASP8AP2_uc003pns.2_Intron|CASP8AP2_uc003pnt.2_Silent_p.S762S|CASP8AP2_uc011dzz.1_Silent_p.S762S	NM_001137667	NP_001131139	Q9UKL3	C8AP2_HUMAN	caspase 8 associated protein 2	762					cell cycle|cellular response to mechanical stimulus|induction of apoptosis via death domain receptors|regulation of transcription, DNA-dependent|signal transduction|transcription, DNA-dependent	cytoplasm|nucleus	caspase activator activity|death receptor binding|transcription corepressor activity			ovary(2)	2		all_cancers(76;3.64e-09)|Prostate(29;1.16e-10)|Acute lymphoblastic leukemia(125;1.45e-10)|all_hematologic(105;7.74e-07)|all_epithelial(107;4.69e-05)|Lung NSC(302;0.238)		BRCA - Breast invasive adenocarcinoma(108;0.0953)		CCACTGAAAGCATTTTGCAGC	0.368	Colon(187;1656 2025 17045 31481 39901)		NA											9	103					0	0	0.004482	0	0
GPR63	81491	broad.mit.edu	37	6	97247416	97247416	+	Silent	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:97247416T>A	uc010kcl.2	-	3	670	c.192A>T	c.(190-192)ACA>ACT	p.T64T	GPR63_uc003pou.2_Silent_p.T64T	NM_001143957	NP_001137429	Q9BZJ6	GPR63_HUMAN	G protein-coupled receptor 63	64	Extracellular (Potential).					integral to membrane|plasma membrane	G-protein coupled receptor activity|protein binding			upper_aerodigestive_tract(1)|ovary(1)	2		all_cancers(76;6.89e-05)|Acute lymphoblastic leukemia(125;7.02e-10)|all_hematologic(75;1.23e-06)|all_epithelial(107;0.0618)|Colorectal(196;0.0721)		BRCA - Breast invasive adenocarcinoma(108;0.0912)		TGGGCACAGCTGTACTATTCA	0.443			NA											10	51					0	0	0.006214	0	0
SERINC1	57515	broad.mit.edu	37	6	122773169	122773169	+	Missense_Mutation	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:122773169A>G	uc003pyy.1	-	6	693	c.623T>C	c.(622-624)CTG>CCG	p.L208P		NM_020755	NP_065806	Q9NRX5	SERC1_HUMAN	serine incorporator 1	208	Helical; (Potential).				phosphatidylserine metabolic process|phospholipid biosynthetic process|positive regulation of transferase activity|sphingolipid metabolic process	endoplasmic reticulum membrane|integral to membrane|plasma membrane	L-serine transmembrane transporter activity|protein binding			ovary(1)	1				GBM - Glioblastoma multiforme(226;0.126)		AACTAAAGACAGCAGATAATT	0.383			NA											7	35					0	0	0.001984	0	0
NCOA7	135112	broad.mit.edu	37	6	126199463	126199463	+	Missense_Mutation	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:126199463A>G	uc010kes.2	+	7	855	c.406A>G	c.(406-408)AAT>GAT	p.N136D	NCOA7_uc003qae.3_Missense_Mutation_p.N136D|NCOA7_uc003qah.2_Missense_Mutation_p.N136D|NCOA7_uc003qai.2_Missense_Mutation_p.N136D|NCOA7_uc010ket.2_Missense_Mutation_p.N32D|NCOA7_uc003qaf.2_Missense_Mutation_p.N136D|NCOA7_uc003qag.2_Missense_Mutation_p.N136D	NM_181782	NP_861447	Q8NI08	NCOA7_HUMAN	nuclear receptor coactivator 7 isoform 1	136	LysM.				cell wall macromolecule catabolic process|regulation of transcription, DNA-dependent|transcription, DNA-dependent	nucleus	protein binding			lung(2)|ovary(1)	3				UCEC - Uterine corpus endometrioid carcinoma (4;0.0803)|GBM - Glioblastoma multiforme(226;0.0193)|all cancers(137;0.237)		CATCACTCCCAATAAATTGGT	0.338			NA											8	37					0	0	0.00308	0	0
BCLAF1	9774	broad.mit.edu	37	6	136597097	136597097	+	Silent	SNP	T	T	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr6:136597097T>G	uc003qgx.1	-	5	1819	c.1566A>C	c.(1564-1566)CGA>CGC	p.R522R	BCLAF1_uc003qgw.1_Silent_p.R349R|BCLAF1_uc003qgy.1_Silent_p.R520R|BCLAF1_uc011edc.1_RNA|BCLAF1_uc011edd.1_RNA|BCLAF1_uc011ede.1_Silent_p.R520R	NM_014739	NP_055554	Q9NYF8	BCLF1_HUMAN	BCL2-associated transcription factor 1 isoform	522					induction of apoptosis|negative regulation of transcription, DNA-dependent|transcription, DNA-dependent	cytoplasm|nucleolus	DNA binding|protein binding			ovary(1)	1	Colorectal(23;0.24)			GBM - Glioblastoma multiforme(68;0.00226)|OV - Ovarian serous cystadenocarcinoma(155;0.00331)		TAGACTTTTCTCGTGCATCCA	0.443	Colon(142;1534 1789 5427 7063 28491)		NA											22	227					0	0	0.00278	0	0
HOXA3	3200	broad.mit.edu	37	7	27147768	27147768	+	Silent	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:27147768G>A	uc011jzl.1	-	3	1298	c.1098C>T	c.(1096-1098)TTC>TTT	p.F366F	HOXA3_uc011jzk.1_Silent_p.F208F|HOXA3_uc003syk.2_Silent_p.F366F	NM_030661	NP_109377	O43365	HXA3_HUMAN	homeobox A3 isoform a	366					angiogenesis	nucleus	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity			breast(2)	2						TGCCCCCCACGAAGACGGGGC	0.677	Esophageal Squamous(136;1368 1743 5685 7935 50360)		NA											6	21					0	0	0.001168	0	0
PKD1L1	168507	broad.mit.edu	37	7	47882626	47882626	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:47882626C>T	uc003tny.1	-	34	5379	c.5379G>A	c.(5377-5379)CCG>CCA	p.P1793P		NM_138295	NP_612152	Q8TDX9	PK1L1_HUMAN	polycystin-1L1	1793	Cytoplasmic (Potential).				cell-cell adhesion	integral to membrane				ovary(8)|upper_aerodigestive_tract(2)|breast(1)	11						GCTGATGGCCCGGCAGGGAAG	0.473			NA											14	61					0	0	0.001855	0	0
ZPBP	11055	broad.mit.edu	37	7	50070836	50070836	+	Silent	SNP	A	A	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:50070836A>G	uc003tou.2	-	5	628	c.558T>C	c.(556-558)TAT>TAC	p.Y186Y	ZPBP_uc011kci.1_Silent_p.Y112Y|ZPBP_uc010kyw.2_Silent_p.Y185Y	NM_007009	NP_008940	Q9BS86	ZPBP1_HUMAN	zona pellucida binding protein isoform 1	186					binding of sperm to zona pellucida	extracellular region					0	Glioma(55;0.08)|all_neural(89;0.245)					AAGAAATATTATAAATGCTAT	0.343			NA											8	59					0	0	0.004482	0	0
GRB10	2887	broad.mit.edu	37	7	50663155	50663155	+	Missense_Mutation	SNP	A	A	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:50663155A>C	uc003tpi.2	-	15	1648	c.1617T>G	c.(1615-1617)ATT>ATG	p.I539M	GRB10_uc003tph.3_Missense_Mutation_p.I481M|GRB10_uc003tpj.2_Missense_Mutation_p.I493M|GRB10_uc003tpk.2_Missense_Mutation_p.I539M|GRB10_uc010kzb.2_Missense_Mutation_p.I481M|GRB10_uc003tpl.2_Missense_Mutation_p.I533M|GRB10_uc003tpm.2_Missense_Mutation_p.I481M|GRB10_uc003tpn.2_Missense_Mutation_p.I481M	NM_005311	NP_005302	Q13322	GRB10_HUMAN	growth factor receptor-bound protein 10 isoform	539	SH2.				insulin receptor signaling pathway|insulin receptor signaling pathway|negative regulation of glucose import|negative regulation of glycogen biosynthetic process|negative regulation of insulin receptor signaling pathway|negative regulation of Wnt receptor signaling pathway|positive regulation of phosphorylation|positive regulation of vascular endothelial growth factor receptor signaling pathway	cytosol|plasma membrane	insulin receptor binding|insulin receptor binding|SH3/SH2 adaptor activity			lung(3)|ovary(2)|upper_aerodigestive_tract(1)	6	Glioma(55;0.08)|all_neural(89;0.245)					GGAAATTTTTAATTTTCTGGT	0.378			NA							Russell-Silver_syndrome				89	319					0	0	0.01441	0	0
GTF2IRD2P1	401375	broad.mit.edu	37	7	72658179	72658179	+	Missense_Mutation	SNP	T	T	C	rs147293416	by1000genomes	TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:72658179T>C	uc003txs.1	-	13	1733	c.805A>G	c.(805-807)AAA>GAA	p.K269E	FKBP6_uc003twz.2_Intron	NR_002164				RecName: Full=General transcription factor II-I repeat domain-containing protein 2B; AltName: Full=GTF2I repeat domain-containing protein 2B; AltName: Full=Transcription factor GTF2IRD2-beta;												0						cagagtgatttcggatgaatt	0			NA											4	47					0	0	0.000602	0	0
MOGAT3	346606	broad.mit.edu	37	7	100841637	100841637	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:100841637G>A	uc003uyc.2	-	5	670	c.503C>T	c.(502-504)CCG>CTG	p.P168L	MOGAT3_uc010lhr.2_Missense_Mutation_p.P168L	NM_178176	NP_835470	Q86VF5	MOGT3_HUMAN	monoacylglycerol O-acyltransferase 3	168					glycerol metabolic process|lipid biosynthetic process	endoplasmic reticulum membrane|integral to membrane	2-acylglycerol O-acyltransferase activity|diacylglycerol O-acyltransferase activity			ovary(2)	2	Lung NSC(181;0.168)|all_lung(186;0.215)					GCGGCTCACCGGACAGAGTCC	0.657			NA											3	26					0	0	0.004672	0	0
MET	4233	broad.mit.edu	37	7	116412045	116412045	+	Splice_Site	SNP	T	T	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:116412045T>C	uc003vij.2	+	14	3215	c.3028_splice	c.e14+2	p.D1010_splice	MET_uc010lkh.2_Splice_Site_p.D1028_splice|MET_uc011knj.1_Splice_Site_p.D580_splice	NM_000245	NP_000236	P08581	MET_HUMAN	met proto-oncogene isoform b precursor						axon guidance|cell proliferation	basal plasma membrane|integral to plasma membrane	ATP binding|hepatocyte growth factor receptor activity|protein binding	p.?(2)|p.982_1028del47(1)		upper_aerodigestive_tract(63)|lung(41)|kidney(18)|NS(10)|ovary(5)|thyroid(4)|central_nervous_system(4)|stomach(3)|liver(3)|pleura(2)|large_intestine(2)|breast(2)|testis(1)|skin(1)	159	all_cancers(3;1.25e-07)|all_epithelial(6;4.07e-08)|Lung NSC(10;0.00108)|all_lung(10;0.00125)	Ovarian(593;0.133)	GBM - Glioblastoma multiforme(2;2.31e-07)|all cancers(2;0.000419)|STAD - Stomach adenocarcinoma(10;0.000512)			TTCCAGAAGGTATATTTCAGT	0.343			NA	Mis		papillary renal|head-neck squamous cell 	papillary renal			Hereditary_Papillary_Renal_Carcinoma_(type_1)				9	32					0	0	0.006214	0	0
AKR1B10	57016	broad.mit.edu	37	7	134222969	134222969	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:134222969G>C	uc003vrr.2	+	8	1085	c.765G>C	c.(763-765)CAG>CAC	p.Q255H		NM_020299	NP_064695	O60218	AK1BA_HUMAN	aldo-keto reductase family 1, member B10	255					cellular aldehyde metabolic process|digestion|steroid metabolic process	cytoplasm	aldo-keto reductase (NADP) activity|protein binding			skin(5)	5						TCCATATCCAGAGGAATGTGA	0.488			NA											42	130					0	0	0.010771	0	0
XKR6	286046	broad.mit.edu	37	8	10755669	10755669	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:10755669C>T	uc003wtk.1	-	3	1746	c.1719G>A	c.(1717-1719)CCG>CCA	p.P573P		NM_173683	NP_775954	Q5GH73	XKR6_HUMAN	XK, Kell blood group complex subunit-related	573						integral to membrane				ovary(1)|skin(1)	2				Lung(29;0.0407)|COAD - Colon adenocarcinoma(149;0.0555)		GACGCCCCAACGGGGTAGGGG	0.557			NA											4	44					0	0	0.009096	0	0
DPYSL2	1808	broad.mit.edu	37	8	26501589	26501589	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:26501589C>T	uc003xfb.1	+	10	1442	c.1092C>T	c.(1090-1092)GTC>GTT	p.V364V	DPYSL2_uc003xfa.2_Silent_p.V469V|DPYSL2_uc010luk.1_RNA|DPYSL2_uc011lah.1_Silent_p.V328V	NM_001386	NP_001377	Q16555	DPYL2_HUMAN	dihydropyrimidinase-like 2	364					axon guidance|pyrimidine base catabolic process|signal transduction	cytosol	dihydropyrimidinase activity|protein binding			large_intestine(1)	1		all_cancers(63;0.121)|Ovarian(32;2.68e-05)|all_epithelial(46;0.116)		UCEC - Uterine corpus endometrioid carcinoma (27;0.0228)|Epithelial(17;3.33e-10)|Colorectal(74;0.183)		GGATGTCCGTCATCTGGGACA	0.587			NA											3	17					0	0	0.004672	0	0
CYP7B1	9420	broad.mit.edu	37	8	65509420	65509420	+	Nonsense_Mutation	SNP	T	T	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	T	T	-	-	T	T	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:65509420T>A	uc003xvj.2	-	6	1504	c.1300A>T	c.(1300-1302)AAG>TAG	p.K434*		NM_004820	NP_004811	O75881	CP7B1_HUMAN	cytochrome P450, family 7, subfamily B,	434					bile acid biosynthetic process|cell death|cholesterol metabolic process|xenobiotic metabolic process	endoplasmic reticulum membrane|microsome	25-hydroxycholesterol 7alpha-hydroxylase activity|electron carrier activity|heme binding|oxysterol 7-alpha-hydroxylase activity			ovary(3)	3		all_cancers(86;0.217)|Lung NSC(129;0.0521)|all_lung(136;0.0906)|all_epithelial(80;0.215)				CACTTCAGCTTTTTCCCTCTT	0.333			NA											5	50					0	0	0.000602	0	0
DCAF4L2	138009	broad.mit.edu	37	8	88885615	88885615	+	Missense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:88885615G>T	uc003ydz.2	-	1	682	c.585C>A	c.(583-585)CAC>CAA	p.H195Q		NM_152418	NP_689631	Q8NA75	DC4L2_HUMAN	WD repeat domain 21C	195										ovary(1)	1						AGTGATACGCGTGGATGCTCA	0.557			NA											5	104					1.23904e-05	1.4898e-05	0.000602	1	0
FAM83A	84985	broad.mit.edu	37	8	124195477	124195477	+	Silent	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:124195477C>G	uc003ypv.2	+	2	2395	c.381C>G	c.(379-381)CCC>CCG	p.P127P	FAM83A_uc003ypw.2_Silent_p.P127P|FAM83A_uc003ypy.2_Silent_p.P127P|FAM83A_uc003ypx.2_Silent_p.P127P|FAM83A_uc003ypz.2_Silent_p.P127P	NM_032899	NP_116288	Q86UY5	FA83A_HUMAN	hypothetical protein LOC84985 isoform a	127										ovary(3)|skin(1)	4	Lung NSC(37;1.55e-09)|Ovarian(258;0.0205)		STAD - Stomach adenocarcinoma(47;0.00527)			CTGAGAAGCCCTACCTGAAGG	0.612			NA											14	120					0	0	0.00499	0	0
EFR3A	23167	broad.mit.edu	37	8	132982805	132982805	+	Silent	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr8:132982805G>C	uc003yte.2	+	10	1275	c.1074G>C	c.(1072-1074)GGG>GGC	p.G358G		NM_015137	NP_055952	Q14156	EFR3A_HUMAN	EFR3 homolog A	358						plasma membrane	binding	p.S348fs*15(1)		ovary(3)|breast(1)|central_nervous_system(1)	5	Esophageal squamous(12;0.00693)|Ovarian(258;0.00769)|Acute lymphoblastic leukemia(118;0.155)		BRCA - Breast invasive adenocarcinoma(115;0.000805)|LUAD - Lung adenocarcinoma(14;0.102)			ATTTACAGGGGGGATCTGTAG	0.403			NA											5	69					0	0	0.000602	0	0
GLIS3	169792	broad.mit.edu	37	9	3879429	3879429	+	Silent	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:3879429C>T	uc003zhw.1	-	7	2024	c.1830G>A	c.(1828-1830)GAG>GAA	p.E610E	GLIS3_uc003zhx.1_Silent_p.E765E|GLIS3_uc010mhf.1_Silent_p.E159E|GLIS3_uc003zhv.1_RNA|GLIS3_uc003zhy.1_Silent_p.E543E	NM_152629	NP_689842	Q8NEA6	GLIS3_HUMAN	GLIS family zinc finger 3 isoform b	610					negative regulation of transcription from RNA polymerase II promoter|positive regulation of transcription from RNA polymerase II promoter|transcription from RNA polymerase II promoter		DNA binding|zinc ion binding			ovary(1)	1		Acute lymphoblastic leukemia(2;0.00464)|Breast(48;0.148)		Lung(2;0.00163)|GBM - Glioblastoma multiforme(50;0.00301)|LUSC - Lung squamous cell carcinoma(2;0.0148)		GGCCTTACCTCTCAGCTCCTG	0.517			NA											4	58					0	0	0.000602	0	0
KIAA1797	54914	broad.mit.edu	37	9	20933099	20933099	+	Missense_Mutation	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:20933099A>T	uc003zog.1	+	30	3767	c.3404A>T	c.(3403-3405)TAC>TTC	p.Y1135F	KIAA1797_uc003zoh.1_Missense_Mutation_p.Y571F	NM_017794	NP_060264	Q5VW36	K1797_HUMAN	hypothetical protein LOC54914	1135						integral to membrane	binding			ovary(8)|breast(1)|kidney(1)	10				GBM - Glioblastoma multiforme(3;2.1e-125)|Lung(42;2.76e-14)|LUSC - Lung squamous cell carcinoma(42;1.99e-11)		AGTCTTGAATACAAGTATGTT	0.383			NA											8	61					0	0	0.006214	0	0
KIAA1797	54914	broad.mit.edu	37	9	20933101	20933101	+	Missense_Mutation	SNP	A	A	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:20933101A>T	uc003zog.1	+	30	3769	c.3406A>T	c.(3406-3408)AAC>TAC	p.N1136Y	KIAA1797_uc003zoh.1_Missense_Mutation_p.N572Y	NM_017794	NP_060264	Q5VW36	K1797_HUMAN	hypothetical protein LOC54914	1136						integral to membrane	binding			ovary(8)|breast(1)|kidney(1)	10				GBM - Glioblastoma multiforme(3;2.1e-125)|Lung(42;2.76e-14)|LUSC - Lung squamous cell carcinoma(42;1.99e-11)		TCTTGAATACAAGTATGTTGT	0.378			NA											7	61					0	0	0.004482	0	0
FAM75A3	727830	broad.mit.edu	37	9	40702809	40702809	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:40702809G>A	uc010mmj.2	+	4	495	c.466G>A	c.(466-468)GAT>AAT	p.D156N		NM_001083124	NP_001076593	Q5VYP0	F75A3_HUMAN	hypothetical protein LOC727830	156	Pro-rich.					integral to membrane				ovary(2)|skin(1)	3				GBM - Glioblastoma multiforme(29;0.02)|Lung(182;0.0681)		AGCTTCCCCGGATCCTCAAGC	0.597			NA											43	262					0	0	0.01441	0	0
SLC28A3	64078	broad.mit.edu	37	9	86917148	86917148	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:86917148C>T	uc010mpz.2	-	5	616	c.491G>A	c.(490-492)AGG>AAG	p.R164K	SLC28A3_uc011lsy.1_Missense_Mutation_p.R95K|SLC28A3_uc004anu.1_Missense_Mutation_p.R164K|SLC28A3_uc010mqb.2_Missense_Mutation_p.R95K	NM_022127	NP_071410	Q9HAS3	S28A3_HUMAN	concentrative Na+-nucleoside cotransporter	164	Cytoplasmic (Potential).				nucleobase, nucleoside and nucleotide metabolic process	integral to membrane|plasma membrane	nucleoside binding			upper_aerodigestive_tract(1)|ovary(1)|pancreas(1)|skin(1)	4						GTTTAGAAGCCTTCTGCCAGG	0.433	Ovarian(106;425 1539 34835 42413 43572)		NA											16	69					0	0	0.006122	0	0
COL15A1	1306	broad.mit.edu	37	9	101765772	101765772	+	Missense_Mutation	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:101765772C>A	uc004azb.1	+	8	1309	c.1103C>A	c.(1102-1104)CCC>CAC	p.P368H		NM_001855	NP_001846	P39059	COFA1_HUMAN	alpha 1 type XV collagen precursor	368	Nonhelical region 1 (NC1).|1.|4 X tandem repeats.				angiogenesis|cell differentiation|signal transduction	collagen type XV|extracellular space|integral to membrane	binding			ovary(6)	6		Acute lymphoblastic leukemia(62;0.0562)				GCCGAGGTGCCCATCAGCACT	0.587			NA											23	101					7.07758e-08	8.99164e-08	0.004656	1	0
RNF20	56254	broad.mit.edu	37	9	104314736	104314736	+	Silent	SNP	G	G	A	rs146044886		TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:104314736G>A	uc004bbn.2	+	13	1692	c.1602G>A	c.(1600-1602)GCG>GCA	p.A534A		NM_019592	NP_062538	Q5VTR2	BRE1A_HUMAN	ring finger protein 20	534	Potential.				histone H2B ubiquitination|histone monoubiquitination|negative regulation of cell migration|positive regulation of transcription, DNA-dependent|protein polyubiquitination|ubiquitin-dependent protein catabolic process	nucleolus|ubiquitin ligase complex	histone binding|p53 binding|transcription coactivator activity|ubiquitin protein ligase binding|ubiquitin-protein ligase activity|zinc ion binding			ovary(4)|lung(1)|breast(1)|kidney(1)|skin(1)	8		all_hematologic(171;8.99e-06)|Acute lymphoblastic leukemia(62;0.000365)|Myeloproliferative disorder(762;0.0255)		OV - Ovarian serous cystadenocarcinoma(323;2.88e-19)|STAD - Stomach adenocarcinoma(157;0.00311)		ATGAGCCTGCGGAGCTAAAAC	0.488			NA											15	150					0	0	0.003163	0	0
WDR38	401551	broad.mit.edu	37	9	127618838	127618838	+	Missense_Mutation	SNP	G	G	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:127618838G>A	uc004box.2	+	6	633	c.577G>A	c.(577-579)GCC>ACC	p.A193T	WDR38_uc011lzn.1_Missense_Mutation_p.A182T|WDR38_uc011lzo.1_Missense_Mutation_p.A193T|WDR38_uc011lzp.1_Missense_Mutation_p.A144T	NM_001045476	NP_001038941	Q5JTN6	WDR38_HUMAN	WD repeat domain 38	193	WD 5.										0						GGGACACAGTGCCAACATCAG	0.642			NA											7	13					0	0	0.001984	0	0
TTC16	158248	broad.mit.edu	37	9	130488670	130488670	+	Missense_Mutation	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:130488670C>G	uc004brq.1	+	10	1479	c.1412C>G	c.(1411-1413)CCC>CGC	p.P471R	PTRH1_uc011mah.1_5'Flank|TTC16_uc011mai.1_Missense_Mutation_p.P458R|TTC16_uc004brr.1_Missense_Mutation_p.P369A|TTC16_uc010mxn.1_Missense_Mutation_p.P67R	NM_144965	NP_659402	Q8NEE8	TTC16_HUMAN	tetratricopeptide repeat domain 16	471							binding				0						CTCCTCAACCCCAAGCAACCA	0.582			NA											3	54					0	0	0.004672	0	0
COL5A1	1289	broad.mit.edu	37	9	137646164	137646164	+	Nonsense_Mutation	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:137646164G>T	uc004cfe.2	+	16	2201	c.1819G>T	c.(1819-1821)GGA>TGA	p.G607*		NM_000093	NP_000084	P20908	CO5A1_HUMAN	alpha 1 type V collagen preproprotein	607	Triple-helical region.				axon guidance|cell adhesion|collagen biosynthetic process|collagen fibril organization|eye morphogenesis|fibril organization|integrin biosynthetic process|skin development|wound healing, spreading of epidermal cells	collagen type V	heparin binding|integrin binding|platelet-derived growth factor binding|proteoglycan binding			skin(4)|ovary(3)|pancreas(2)|central_nervous_system(1)|kidney(1)	11		Myeloproliferative disorder(178;0.0341)		all cancers(34;2.28e-08)|OV - Ovarian serous cystadenocarcinoma(145;6.03e-08)|Epithelial(140;6.4e-08)|GBM - Glioblastoma multiforme(294;0.131)		CGGGAAGCCCGGAAGACGGGT	0.642			NA											16	81					1.01871e-10	1.33623e-10	0.008871	1	0
QSOX2	169714	broad.mit.edu	37	9	139110585	139110585	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr9:139110585G>C	uc010nbi.2	-	8	1064	c.1026C>G	c.(1024-1026)CAC>CAG	p.H342Q		NM_181701	NP_859052	Q6ZRP7	QSOX2_HUMAN	quiescin Q6 sulfhydryl oxidase 2 precursor	342					cell redox homeostasis	extracellular region|integral to membrane|nuclear membrane|plasma membrane	thiol oxidase activity			ovary(1)	1		Myeloproliferative disorder(178;0.0511)		Epithelial(140;7.78e-08)|OV - Ovarian serous cystadenocarcinoma(145;1.55e-07)		CCAGGGACTTGTGGGCTGCCA	0.597			NA											5	39					0	0	0.001984	0	0
ARSF	416	broad.mit.edu	37	X	3002444	3002444	+	Silent	SNP	C	C	G			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:3002444C>G	uc004cre.1	+	6	788	c.567C>G	c.(565-567)CTC>CTG	p.L189L	ARSF_uc004crf.1_Silent_p.L189L	NM_004042	NP_004033	P54793	ARSF_HUMAN	arylsulfatase F precursor	189						extracellular region	arylsulfatase activity|metal ion binding			ovary(2)	2		all_cancers(21;4.28e-07)|all_epithelial(21;2.07e-08)|all_lung(23;2.81e-05)|Lung NSC(23;0.000693)|Lung SC(21;0.122)				AGAGTCAGCTCTGGCTCTGTG	0.537			NA											4	48					0	0	0.000602	0	0
SMC1A	8243	broad.mit.edu	37	X	53432771	53432771	+	Missense_Mutation	SNP	C	C	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:53432771C>T	uc004dsg.2	-	10	1732	c.1663G>A	c.(1663-1665)GAC>AAC	p.D555N	SMC1A_uc011moe.1_Missense_Mutation_p.D533N|SMC1A_uc011mof.1_Missense_Mutation_p.D321N	NM_006306	NP_006297	Q14683	SMC1A_HUMAN	structural maintenance of chromosomes 1A	555	Flexible hinge.				cell cycle checkpoint|cell division|DNA repair|meiosis|mitotic metaphase/anaphase transition|mitotic prometaphase|mitotic sister chromatid cohesion|mitotic spindle organization|negative regulation of DNA endoreduplication|nuclear mRNA splicing, via spliceosome|response to radiation|signal transduction in response to DNA damage	cohesin core heterodimer|condensed chromosome kinetochore|condensed nuclear chromosome|cytoplasm|meiotic cohesin complex|nucleoplasm	ATP binding|chromatin binding|microtubule motor activity|protein heterodimerization activity			ovary(5)|central_nervous_system(1)	6						TGAATACAGTCCCGGCCTGTC	0.517			NA											4	18					0	0	0.009096	0	0
PABPC5	140886	broad.mit.edu	37	X	90690801	90690801	+	Silent	SNP	C	C	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	C	C	-	-	C	C	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:90690801C>A	uc004efg.2	+	2	665	c.225C>A	c.(223-225)GCC>GCA	p.A75A	PABPC5_uc004eff.1_Intron	NM_080832	NP_543022	Q96DU9	PABP5_HUMAN	poly(A) binding protein, cytoplasmic 5	75	RRM 1.					cytoplasm	nucleotide binding|RNA binding			ovary(1)|lung(1)|pancreas(1)	3						CAGAGTGGGCCTTGAACACCA	0.512			NA											8	14					0.000157383	0.000178604	0.00308	1	0
IRS4	8471	broad.mit.edu	37	X	107975900	107975900	+	Silent	SNP	G	G	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:107975900G>T	uc004eoc.2	-	1	3708	c.3675C>A	c.(3673-3675)CCC>CCA	p.P1225P		NM_003604	NP_003595	O14654	IRS4_HUMAN	insulin receptor substrate 4	1225						plasma membrane	insulin receptor binding|SH3/SH2 adaptor activity|signal transducer activity			ovary(4)|large_intestine(2)|lung(1)|breast(1)|skin(1)|pancreas(1)	10						CTCTCTCCGGGGGTCTTGGCA	0.577			NA											57	105					4.33383e-22	5.99612e-22	0.01441	1	0
TRPC5	7224	broad.mit.edu	37	X	111019956	111019956	+	Missense_Mutation	SNP	G	G	C			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:111019956G>C	uc004epl.1	-	11	3426	c.2507C>G	c.(2506-2508)TCC>TGC	p.S836C		NM_012471	NP_036603	Q9UL62	TRPC5_HUMAN	transient receptor potential cation channel,	836	Cytoplasmic (Potential).				axon guidance	calcium channel complex|integral to plasma membrane	protein binding|store-operated calcium channel activity			urinary_tract(1)	1						ACCCATGAAGGAGCGTTTGCT	0.458			NA											21	89					0	0	0.014323	0	0
UBR4	23352	broad.mit.edu	37	1	19499434	19499434	+	Frame_Shift_Del	DEL	G	G	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:19499434delG	uc001bbi.2	-	25	3449	c.3445delC	c.(3445-3447)CATfs	p.H1149fs	UBR4_uc001bbm.1_Frame_Shift_Del_p.H360fs	NM_020765	NP_065816	Q5T4S7	UBR4_HUMAN	retinoblastoma-associated factor 600	1149					interspecies interaction between organisms	cytoplasm|cytoskeleton|integral to membrane|nucleus	calmodulin binding|ubiquitin-protein ligase activity|zinc ion binding			kidney(10)|ovary(7)|breast(4)|pancreas(2)|skin(2)	25		Colorectal(325;3.46e-05)|Renal(390;0.000147)|all_lung(284;0.000328)|Lung NSC(340;0.000406)|Breast(348;0.000814)|Ovarian(437;0.00774)|Myeloproliferative disorder(586;0.0256)		UCEC - Uterine corpus endometrioid carcinoma (279;0.00674)|BRCA - Breast invasive adenocarcinoma(304;5.43e-05)|Kidney(64;0.000337)|KIRC - Kidney renal clear cell carcinoma(64;0.00426)|STAD - Stomach adenocarcinoma(196;0.00715)|READ - Rectum adenocarcinoma(331;0.0816)		GACGACTTATGAGGATCAGTC	0.512			NA											13	69	---	---	---	---	NA	NA	NA	NA	NA
CD55	1604	broad.mit.edu	37	1	207504605	207504607	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	GAA	GAA	-	-	GAA	GAA	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr1:207504605_207504607delGAA	uc001hfq.3	+	6	1111_1113	c.817_819delGAA	c.(817-819)GAAdel	p.E273del	CD55_uc001hfp.3_In_Frame_Del_p.E273del|CD55_uc001hfr.3_In_Frame_Del_p.E273del|CD55_uc010psf.1_RNA|CD55_uc009xcf.2_In_Frame_Del_p.E209del|CD55_uc009xce.2_In_Frame_Del_p.E273del|CD55_uc009xcg.2_In_Frame_Del_p.E15del	NM_000574	NP_000565	P08174	DAF_HUMAN	decay accelerating factor for complement isoform	273	Sushi 4.				complement activation, classical pathway|elevation of cytosolic calcium ion concentration|innate immune response|respiratory burst	anchored to membrane|extracellular region|integral to plasma membrane|membrane raft|soluble fraction	receptor activity			ovary(1)	1					Chloramphenicol(DB00446)	GAATAATGATGAAGGAGAGTGGA	0.32			NA											10	131	---	---	---	---	NA	NA	NA	NA	NA
Unknown	0	broad.mit.edu	37	15	29090935	29090936	+	Frame_Shift_Ins	INS	-	-	T			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	-	-	-	-	-	-	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr15:29090935_29090936insT	uc010uar.1	-	5	409_410	c.280_281insA	c.(280-282)ATCfs	p.I94fs						SubName: Full=cDNA FLJ59069, weakly similar to Golgin subfamily A member 6;												NA						ACACATAAGGATTCGTATGGTA	0.505			NA											10	3	---	---	---	---	NA	NA	NA	NA	NA
ITGA4	3676	broad.mit.edu	37	2	182359493	182359495	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	ACA	ACA	-	-	ACA	ACA	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr2:182359493_182359495delACA	uc002unu.2	+	12	2056_2058	c.1293_1295delACA	c.(1291-1296)GGACAG>GGG	p.Q432del		NM_000885	NP_000876	P13612	ITA4_HUMAN	integrin alpha 4 precursor	432	FG-GAP 7.|Extracellular (Potential).				blood coagulation|integrin-mediated signaling pathway|leukocyte cell-cell adhesion|leukocyte migration|regulation of immune response	integrin complex	identical protein binding|receptor activity			ovary(3)|lung(1)|central_nervous_system(1)|pancreas(1)	6			OV - Ovarian serous cystadenocarcinoma(117;0.0593)		Natalizumab(DB00108)	GTATGTTTGGACAGTCTATATCA	0.31			NA											16	151	---	---	---	---	NA	NA	NA	NA	NA
CTNND2	1501	broad.mit.edu	37	5	11110989	11110991	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	TTC	TTC	-	-	TTC	TTC	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr5:11110989_11110991delTTC	uc003jfa.1	-	14	2587_2589	c.2442_2444delGAA	c.(2440-2445)AAGAAA>AAA	p.814_815KK>K	CTNND2_uc010itt.2_In_Frame_Del_p.723_724KK>K|CTNND2_uc011cmy.1_In_Frame_Del_p.477_478KK>K|CTNND2_uc011cmz.1_In_Frame_Del_p.381_382KK>K|CTNND2_uc010itu.1_RNA|CTNND2_uc011cmx.1_In_Frame_Del_p.381_382KK>K	NM_001332	NP_001323	Q9UQB3	CTND2_HUMAN	catenin (cadherin-associated protein), delta 2	814_815	Poly-Lys.				multicellular organismal development|neuron cell-cell adhesion|regulation of transcription, DNA-dependent|signal transduction|transcription, DNA-dependent	adherens junction|cytoplasm|nucleus	protein binding			large_intestine(2)|ovary(2)|skin(2)|pancreas(1)|lung(1)	8						GGATTTCTTTTTCTTCTTCTTCT	0.502			NA											9	670	---	---	---	---	NA	NA	NA	NA	NA
SUN1	23353	broad.mit.edu	37	7	893192	893192	+	Frame_Shift_Del	DEL	G	G	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	G	G	-	-	G	G	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:893192delG	uc011jvp.1	+	11	1279	c.1200delG	c.(1198-1200)ATGfs	p.M400fs	GET4_uc003sjj.1_RNA|SUN1_uc003sjf.2_Frame_Shift_Del_p.M317fs|SUN1_uc011jvq.1_Frame_Shift_Del_p.M297fs|SUN1_uc003sjg.2_Frame_Shift_Del_p.M305fs|SUN1_uc011jvr.1_Frame_Shift_Del_p.M209fs|SUN1_uc003sji.2_Frame_Shift_Del_p.M238fs|SUN1_uc003sjk.2_Frame_Shift_Del_p.M39fs	NM_001130965	NP_001124437	O94901	SUN1_HUMAN	unc-84 homolog A isoform a	427	Perinuclear space.|Potential.				cytoskeletal anchoring at nuclear membrane|nuclear matrix anchoring at nuclear membrane	integral to membrane|nuclear inner membrane|SUN-KASH complex	protein binding				0						TGGACCAGATGGAAGGCGGCG	0.647			NA											12	76	---	---	---	---	NA	NA	NA	NA	NA
ABCA13	154664	broad.mit.edu	37	7	48547627	48547627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	A	A	-	-	A	A	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chr7:48547627delA	uc003toq.2	+	50	13531	c.13506delA	c.(13504-13506)ACAfs	p.T4502fs	ABCA13_uc010kys.1_Frame_Shift_Del_p.T1577fs|ABCA13_uc010kyt.1_RNA|ABCA13_uc010kyu.1_Frame_Shift_Del_p.T232fs	NM_152701	NP_689914	Q86UQ4	ABCAD_HUMAN	ATP binding cassette, sub-family A (ABC1),	4502					transport	integral to membrane	ATP binding|ATPase activity			ovary(5)|central_nervous_system(4)|skin(1)	10						ACTGGTTCACAAACTTCCTAT	0.493			NA											7	46	---	---	---	---	NA	NA	NA	NA	NA
OFD1	8481	broad.mit.edu	37	X	13764945	13764946	+	Frame_Shift_Ins	INS	-	-	A			TCGA-75-5122-01A-01D-1753-08	TCGA-75-5122-10A-01D-1753-08	-	-	-	-	-	-	Unknown	Untested	Somatic	Unspecified	WXS	none	NA	NA	Illumina HiSeq	e359b24f-7312-432f-b054-68dedc027df2	a7bd52d4-5248-4a03-ac40-1169fe1d45f7	g.chrX:13764945_13764946insA	uc004cvp.3	+	8	1060_1061	c.701_702insA	c.(700-702)GCAfs	p.A234fs	OFD1_uc004cvr.3_5'UTR|OFD1_uc011mil.1_5'UTR|OFD1_uc004cvq.3_Frame_Shift_Ins_p.A94fs|OFD1_uc010nen.2_Frame_Shift_Ins_p.A233fs|OFD1_uc004cvs.3_RNA|OFD1_uc004cvu.3_Frame_Shift_Ins_p.A233fs|OFD1_uc004cvv.3_Frame_Shift_Ins_p.A233fs|OFD1_uc010neo.1_Frame_Shift_Ins_p.A20fs	NM_003611	NP_003602	O75665	OFD1_HUMAN	oral-facial-digital syndrome 1	234	Potential.				cilium movement involved in determination of left/right asymmetry|G2/M transition of mitotic cell cycle	centriole|cilium|cytosol|microtubule basal body|nuclear membrane	alpha-tubulin binding|gamma-tubulin binding				0						AAAATGGAAGCAAAAAAAAAGT	0.302			NA											11	37	---	---	---	---	NA	NA	NA	NA	NA
