Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
OPRK1	0	genome.wustl.edu	37	8	54163589	54163589	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	54163589	54163589	G	T	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	silent	c.9	p.S3	0.999	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556	tier1	-	-	28	0	0.00	8	3	27.27
LRRK1	0	genome.wustl.edu	37	15	101554526	101554526	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	15	101554526	101554526	C	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.1425	p.L475	0.999	smart_Leu-rich_rpt_typical-subtyp	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	34	0	0.00	27	7	20.59
GRAMD4	0	genome.wustl.edu	37	22	47059047	47059047	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	22	47059047	47059047	G	A	SNP	GRAMD4	ENST00000361034	human	ensembl	74_37	+1	known	missense	c.577	p.E193K	0.999	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD4	HGNC	ENSG00000075240	tier1	-	-	86	0	0.00	64	13	16.88
OR1K1	0	genome.wustl.edu	37	9	125562968	125562968	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	125562968	125562968	G	T	SNP	OR1K1	ENST00000277309	human	ensembl	74_37	+1	known	silent	c.567	p.S189	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1K1	HGNC	ENSG00000165204	tier1	rs149046653	GMAF=0.0005	57	0	0.00	27	4	12.90
OTOP3	0	genome.wustl.edu	37	17	72943417	72943417	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	72943417	72943417	G	T	SNP	OTOP3	ENST00000328801	human	ensembl	74_37	+1	known	missense	c.1467	p.Q489H	0.000	NULL	pfam_Otopetrin	-	no_errors	OTOP3	HGNC	ENSG00000182938	tier1	-	-	62	0	0.00	29	4	12.12
CENPC	0	genome.wustl.edu	37	4	68357896	68357896	+	Splice_Site	SNP	A	A	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	68357896	68357896	A	C	SNP	CENPC	ENST00000273853	human	ensembl	74_37	-1	known	splice_site	c.2515+2	e16+2	1.000	-	-	-	no_errors	CENPC	HGNC	ENSG00000145241	tier1	-	-	78	0	0.00	57	32	35.96
SETX	0	genome.wustl.edu	37	9	135137998	135137998	+	RNA	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	135137998	135137998	C	T	SNP	SETX	ENST00000477049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SETX	HGNC	ENSG00000107290	tier1	-	-	37	0	0.00	24	7	22.58
CR2	0	genome.wustl.edu	37	1	207649750	207649750	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	207649750	207649750	C	G	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.2888	p.A963G	0.106	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322	tier1	-	-	77	0	0.00	33	14	29.79
HAUS7	0	genome.wustl.edu	37	X	152721042	152721042	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	X	152721042	152721042	G	A	SNP	HAUS7	ENST00000421080	human	ensembl	74_37	-1	known	missense	c.383	p.P128L	0.936	NULL	NULL	-	no_errors	HAUS7	HGNC	ENSG00000213397	tier1	-	-	118	0	0.00	67	31	31.31
LRRC42	0	genome.wustl.edu	37	1	54427720	54427720	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	54427720	54427720	C	T	SNP	LRRC42	ENST00000319223	human	ensembl	74_37	+1	known	silent	c.738	p.I246	1.000	NULL	NULL	-	no_errors	LRRC42	HGNC	ENSG00000116212	tier1	-	-	90	0	0.00	108	40	27.03
LRRC63	0	genome.wustl.edu	37	13	46802140	46802140	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	13	46802140	46802140	G	T	SNP	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	silent	c.579	p.S193	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1	-	-	62	0	0.00	38	4	9.52
ABCD1	0	genome.wustl.edu	37	X	153008509	153008509	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	X	153008509	153008509	C	G	SNP	ABCD1	ENST00000218104	human	ensembl	74_37	+1	known	missense	c.1849	p.R617G	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_FA_transporter	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_FA_transporter	-	no_errors	ABCD1	HGNC	ENSG00000101986	tier1	-	-	168	0	0.00	80	48	37.21
LRRC42	0	genome.wustl.edu	37	1	54427946	54427946	+	RNA	SNP	C	C	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	54427946	54427946	C	G	SNP	LRRC42	ENST00000477905	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	LRRC42	HGNC	ENSG00000116212	tier1	-	-	78	0	0.00	102	35	25.55
DMBT1	0	genome.wustl.edu	37	10	124336090	124336090	+	Silent	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	10	124336090	124336090	A	G	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	silent	c.459	p.G153	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908	tier1	-	-	219	1	0.45	27	55	67.07
TEX13B	0	genome.wustl.edu	37	X	107224536	107224536	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	X	107224536	107224536	G	T	SNP	TEX13B	ENST00000302917	human	ensembl	74_37	-1	known	missense	c.713	p.A238E	0.090	NULL	NULL	-	no_errors	TEX13B	HGNC	ENSG00000170925	tier1	-	-	52	0	0.00	24	14	35.90
QRICH2	0	genome.wustl.edu	37	17	74287496	74287496	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	74287496	74287496	G	T	SNP	QRICH2	ENST00000262765	human	ensembl	74_37	-1	known	missense	c.2814	p.D938E	0.000	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646	tier1	-	-	39	0	0.00	46	4	8.00
DAAM2	0	genome.wustl.edu	37	6	39855307	39855307	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	39855307	39855307	G	T	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.1999	p.V667F	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122	tier1	-	-	48	0	0.00	23	4	14.81
RGPD2	0	genome.wustl.edu	37	2	88071786	88071786	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	88071786	88071786	A	-	DEL	RGPD2	ENST00000398146	human	ensembl	74_37	-1	known	frame_shift_del	c.5138	p.L1713fs	1.000	pfam_GRIP,superfamily_GRIP,smart_GRIP,pfscan_GRIP	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_2,pfam_TPR_1,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD2	HGNC	ENSG00000185304	tier1			20	0	0.00	10	17	62.96
PRRX1	0	genome.wustl.edu	37	1	170705412	170705412	+	RNA	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	170705412	170705412	G	T	SNP	PRRX1	ENST00000476867	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.550	-	-	-	no_errors	PRRX1	HGNC	ENSG00000116132	tier1	-	-	56	0	0.00	55	32	36.78
KIAA0430	0	genome.wustl.edu	37	16	15696497	15696498	+	Frame_Shift_Ins	INS	-	-	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	16	15696497	15696498	-	C	INS	KIAA0430	ENST00000344181	human	ensembl	74_37	-1	known	frame_shift_ins	c.3322_3321	p.P1107fs	0.001:0.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	tier1			27	0	0.00	36	7	16.28
WDR31	0	genome.wustl.edu	37	9	116079028	116079028	+	RNA	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	116079028	116079028	C	T	SNP	WDR31	ENST00000461942	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	WDR31	HGNC	ENSG00000148225	tier1	-	-	71	0	0.00	38	4	9.52
EPHB6	0	genome.wustl.edu	37	7	142562052	142562054	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	7	142562052	142562054	CCT	-	DEL	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	in_frame_del	c.494_496	p.S169in_frame_del	0.978:0.949:0.908	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123	tier1			42	0	0.00	15	3	16.67
CDH6	0	genome.wustl.edu	37	5	31323298	31323298	+	Silent	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	5	31323298	31323298	G	A	SNP	CDH6	ENST00000265071	human	ensembl	74_37	+1	known	silent	c.2256	p.S752	0.985	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361	tier1	-	-	56	0	0.00	32	35	52.24
CHL1	0	genome.wustl.edu	37	3	369953	369953	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	3	369953	369953	T	A	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.301	p.S101T	0.037	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	78	0	0.00	42	24	36.36
SP110	0	genome.wustl.edu	37	2	231036818	231036818	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	231036818	231036818	C	G	SNP	SP110	ENST00000258381	human	ensembl	74_37	-1	known	missense	c.1779	p.K593N	0.004	superfamily_Bromodomain	pfam_Sp100,pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP110	HGNC	ENSG00000135899	tier1	-	-	45	0	0.00	30	11	26.83
ZCCHC6	0	genome.wustl.edu	37	9	88937339	88937339	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	88937339	88937339	C	-	DEL	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	frame_shift_del	c.2929	p.D977fs	1.000	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223	tier1			96	0	0.00	44	30	40.54
HECTD2	0	genome.wustl.edu	37	10	93245134	93245134	+	RNA	SNP	A	A	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	10	93245134	93245134	A	T	SNP	HECTD2	ENST00000498446	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	HECTD2	HGNC	ENSG00000165338	tier1	-	-	47	0	0.00	11	19	63.33
OR51E1	0	genome.wustl.edu	37	11	4673791	4673791	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	11	4673791	4673791	C	A	SNP	OR51E1	ENST00000396952	human	ensembl	74_37	+1	known	missense	c.35	p.A12D	0.749	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E1	HGNC	ENSG00000180785	tier1	-	-	67	0	0.00	39	21	35.00
SERPINF2	0	genome.wustl.edu	37	17	1657573	1657573	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	1657573	1657573	C	T	SNP	SERPINF2	ENST00000324015	human	ensembl	74_37	+1	known	silent	c.1221	p.S407	0.066	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF2	HGNC	ENSG00000167711	tier1	-	-	63	0	0.00	8	25	75.76
TMCO4	0	genome.wustl.edu	37	1	20027301	20027301	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	20027301	20027301	G	A	SNP	TMCO4	ENST00000294543	human	ensembl	74_37	-1	known	missense	c.1342	p.R448W	1.000	pfam_DUF726,pfam_DUF900_hydrolase	pfam_DUF726,pfam_DUF900_hydrolase	-	no_errors	TMCO4	HGNC	ENSG00000162542	tier1	rs144254063	-	65	0	0.00	44	15	25.42
SPTBN4	0	genome.wustl.edu	37	19	40978532	40978532	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	19	40978532	40978532	G	A	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	1.000	pirsf_Spectrin_bsu	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	93	0	0.00	13	16	55.17
TEC	0	genome.wustl.edu	37	4	48165756	48165756	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	48165756	48165756	C	T	SNP	TEC	ENST00000381501	human	ensembl	74_37	-1	known	missense	c.700	p.V234I	1.000	pfam_SH3_2,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_Znf_Btk_motif,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,prints_SH2,prints_Znf_Btk_motif	-	no_errors	TEC	HGNC	ENSG00000135605	tier1	-	-	93	0	0.00	64	31	32.63
MLF1IP	0	genome.wustl.edu	37	4	185637744	185637744	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	185637744	185637744	A	G	SNP	MLF1IP	ENST00000281453	human	ensembl	74_37	-1	known	missense	c.425	p.I142T	0.000	NULL	NULL	-	no_errors	MLF1IP	HGNC	ENSG00000151725	tier1	-	-	81	0	0.00	49	22	30.99
OR10V1	0	genome.wustl.edu	37	11	59480549	59480549	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	11	59480549	59480549	C	T	SNP	OR10V1	ENST00000307552	human	ensembl	74_37	-1	known	missense	c.770	p.S257N	0.995	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10V1	HGNC	ENSG00000172289	tier1	-	-	48	0	0.00	36	4	9.76
IL17A	0	genome.wustl.edu	37	6	52053855	52053855	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	52053855	52053855	G	A	SNP	IL17A	ENST00000340057	human	ensembl	74_37	+1	known	missense	c.233	p.R78H	0.024	pfam_IL-17_fam,prints_IL-17_chr	pfam_IL-17_fam,prints_IL-17_chr	-	no_errors	IL17A	HGNC	ENSG00000112115	tier1	-	-	50	0	0.00	18	14	43.75
BNC1	0	genome.wustl.edu	37	15	83935620	83935620	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	15	83935620	83935620	G	T	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.403	p.L135I	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	76	0	0.00	61	26	29.89
OGDH	0	genome.wustl.edu	37	7	44695959	44695959	+	Missense_Mutation	SNP	G	G	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	7	44695959	44695959	G	C	SNP	OGDH	ENST00000543843	human	ensembl	74_37	+1	known	missense	c.368	p.G123A	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDH	HGNC	ENSG00000105953	tier1	-	-	106	0	0.00	34	26	43.33
SLC17A7	0	genome.wustl.edu	37	19	49934335	49934335	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	19	49934335	49934335	G	T	SNP	SLC17A7	ENST00000221485	human	ensembl	74_37	-1	known	missense	c.1326	p.N442K	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A7	HGNC	ENSG00000104888	tier1	-	-	34	0	0.00	10	3	23.08
HS3ST1	0	genome.wustl.edu	37	4	11401038	11401038	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	11401038	11401038	C	T	SNP	HS3ST1	ENST00000002596	human	ensembl	74_37	-1	known	missense	c.592	p.V198M	0.949	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST1	HGNC	ENSG00000002587	tier1	rs202015819	GMAF=0	14	0	0.00	7	7	50.00
STARD4	0	genome.wustl.edu	37	5	110837715	110837715	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	5	110837715	110837715	C	T	SNP	STARD4	ENST00000296632	human	ensembl	74_37	-1	known	missense	c.227	p.R76H	1.000	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	STARD4	HGNC	ENSG00000164211	tier1	rs143239767	GMAF=0.0005	72	0	0.00	60	70	53.85
ANGPT4	0	genome.wustl.edu	37	20	896733	896733	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	20	896733	896733	T	G	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	missense	c.125	p.H42P	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280	tier1	-	-	36	0	0.00	10	7	41.18
CLN6	0	genome.wustl.edu	37	15	68504112	68504112	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	15	68504112	68504112	C	T	SNP	CLN6	ENST00000249806	human	ensembl	74_37	-1	known	silent	c.387	p.V129	1.000	NULL	NULL	-	no_errors	CLN6	HGNC	ENSG00000128973	tier1	-	-	40	0	0.00	30	5	14.29
KIAA0430	0	genome.wustl.edu	37	16	15696492	15696493	+	Frame_Shift_Ins	INS	-	-	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	16	15696492	15696493	-	G	INS	KIAA0430	ENST00000344181	human	ensembl	74_37	-1	known	frame_shift_ins	c.3327_3326	p.P1110fs	0.001:0.000	NULL	pfam_Limkain_b1_cons_dom,pfam_NYN_limkain-b1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	KIAA0430	HGNC	ENSG00000166783	tier1			25	0	0.00	41	7	14.58
TP53	0	genome.wustl.edu	37	17	7578369	7578369	+	Splice_Site	DEL	A	A	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	7578369	7578369	A	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site_del	c.559+2	e4+2	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			37	0	0.00	13	13	50.00
CDH26	0	genome.wustl.edu	37	20	58587783	58587784	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	20	58587783	58587784	-	A	INS	CDH26	ENST00000348616	human	ensembl	74_37	+1	known	frame_shift_ins	c.2497_2498	p.*834fs	0.000:0.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1			56	0	0.00	23	6	20.69
M6PR	0	genome.wustl.edu	37	12	9098969	9098969	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	12	9098969	9098969	C	-	DEL	M6PR	ENST00000000412	human	ensembl	74_37	-1	known	frame_shift_del	c.32	p.G11fs	0.055	NULL	superfamily_Man6P_isomerase_rcpt-bd_dom,prints_Man_6_P_rcpt	-	no_errors	M6PR	HGNC	ENSG00000003056	tier1			81	0	0.00	28	3	9.68
CNTNAP5	0	genome.wustl.edu	37	2	125504848	125504848	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	125504848	125504848	G	-	DEL	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	frame_shift_del	c.2117	p.R706fs	0.007	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1			62	0	0.00	30	22	42.31
PPRC1	0	genome.wustl.edu	37	10	103898382	103898382	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	10	103898382	103898382	T	A	SNP	PPRC1	ENST00000278070	human	ensembl	74_37	+1	known	missense	c.349	p.L117I	0.354	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPRC1	HGNC	ENSG00000148840	tier1	-	-	51	0	0.00	12	14	53.85
DNAH7	0	genome.wustl.edu	37	2	196849355	196849355	+	Splice_Site	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	196849355	196849355	C	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	splice_site	c.1833+1	e15+1	1.000	-	-	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	57	0	0.00	39	29	42.65
PKD2	0	genome.wustl.edu	37	4	88929231	88929231	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	88929231	88929231	G	T	SNP	PKD2	ENST00000237596	human	ensembl	74_37	+1	known	missense	c.346	p.V116L	1.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,pfscan_EF_hand_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2	HGNC	ENSG00000118762	tier1	-	-	64	0	0.00	37	4	9.76
PPP1R26	0	genome.wustl.edu	37	9	138377398	138377398	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	138377398	138377398	A	G	SNP	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	missense	c.1042	p.K348E	0.000	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422	tier1	-	-	58	0	0.00	34	16	32.00
FREM2	0	genome.wustl.edu	37	13	39454452	39454452	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	13	39454452	39454452	C	T	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.9038	p.T3013M	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	rs114400765	GMAF=0	63	0	0.00	8	24	75.00
UNC45A	0	genome.wustl.edu	37	15	91477671	91477671	+	RNA	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	15	91477671	91477671	C	T	SNP	UNC45A	ENST00000461266	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	UNC45A	HGNC	ENSG00000140553	tier1	-	-	47	0	0.00	30	4	11.76
ZNF207	0	genome.wustl.edu	37	17	30700337	30700338	+	RNA	INS	-	-	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	30700337	30700338	-	A	INS	ZNF207	ENST00000584416	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	ZNF207	HGNC	ENSG00000010244	tier1			33	0	0.00	44	4	8.33
ADAMTSL1	0	genome.wustl.edu	37	9	18826431	18826431	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	18826431	18826431	C	T	SNP	ADAMTSL1	ENST00000388710	human	ensembl	74_37	+1	known	silent	c.187	p.L63	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	32	0	0.00	21	4	16.00
LARP1	0	genome.wustl.edu	37	5	154181828	154181828	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	5	154181828	154181828	G	T	SNP	LARP1	ENST00000336314	human	ensembl	74_37	+1	known	missense	c.1747	p.D583Y	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506	tier1	-	-	46	0	0.00	15	15	48.39
PTPRK	0	genome.wustl.edu	37	6	128321224	128321225	+	RNA	INS	-	-	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	128321224	128321225	-	A	INS	PTPRK	ENST00000524481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.341:0.625	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1			17	0	0.00	20	4	16.67
TRIOBP	0	genome.wustl.edu	37	22	38122497	38122497	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	22	38122497	38122497	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.3934	p.G1312R	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	11	0	0.00	6	7	53.85
FRK	0	genome.wustl.edu	37	6	116289823	116289823	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	116289823	116289823	G	T	SNP	FRK	ENST00000606080	human	ensembl	74_37	-1	known	silent	c.546	p.I182	0.017	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FRK	HGNC	ENSG00000111816	tier1	-	-	138	0	0.00	77	36	31.86
PYGM	0	genome.wustl.edu	37	11	64525326	64525326	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	11	64525326	64525326	G	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	silent	c.585	p.P195	0.813	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976	tier1	-	-	44	0	0.00	35	4	10.26
ESPL1	0	genome.wustl.edu	37	12	53683327	53683327	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	12	53683327	53683327	C	T	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.5062	p.P1688S	1.000	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476	tier1	-	-	68	0	0.00	23	7	23.33
PWWP2B	0	genome.wustl.edu	37	10	134219604	134219604	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	10	134219604	134219604	C	T	SNP	PWWP2B	ENST00000305233	human	ensembl	74_37	+1	known	missense	c.1600	p.P534S	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	PWWP2B	HGNC	ENSG00000171813	tier1	-	-	96	0	0.00	17	21	55.26
ACAD11	0	genome.wustl.edu	37	3	132358496	132358496	+	Nonsense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	3	132358496	132358496	G	T	SNP	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	nonsense	c.542	p.S181*	0.988	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303	tier1	-	-	55	0	0.00	53	5	8.62
SF3A2	0	genome.wustl.edu	37	19	2248202	2248202	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	19	2248202	2248202	A	G	SNP	SF3A2	ENST00000221494	human	ensembl	74_37	+1	known	missense	c.1052	p.H351R	0.009	NULL	smart_Znf_U1,pfscan_Znf_C2H2_matrin	-	no_errors	SF3A2	HGNC	ENSG00000104897	tier1	-	-	20	0	0.00	14	10	41.67
EPHA5	0	genome.wustl.edu	37	4	66230840	66230840	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	66230840	66230840	C	A	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.2131	p.V711L	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	tier1	-	-	112	0	0.00	29	24	45.28
KYNU	0	genome.wustl.edu	37	2	143743591	143743591	+	Splice_Site	SNP	G	G	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	143743591	143743591	G	C	SNP	KYNU	ENST00000264170	human	ensembl	74_37	+1	known	splice_site	c.902+1	e9+1	1.000	-	-	-	no_errors	KYNU	HGNC	ENSG00000115919	tier1	-	-	63	0	0.00	42	24	36.36
ENSG00000255201	0	genome.wustl.edu	37	8	38283595	38283595	+	RNA	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	38283595	38283595	C	T	SNP	ENSG00000255201	ENST00000528407	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-350N15.4	Clone_based_vega_gene	ENSG00000255201	tier1	-	-	44	0	0.00	29	4	12.12
PHKB	0	genome.wustl.edu	37	16	47545604	47545606	+	In_Frame_Del	DEL	CAA	CAA	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	CAA	CAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	16	47545604	47545606	CAA	-	DEL	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	in_frame_del	c.434_436	p.T147in_frame_del	1.000:0.977:0.982	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893	tier1			66	0	0.00	27	13	32.50
PPP2R2C	0	genome.wustl.edu	37	4	6349641	6349641	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	6349641	6349641	C	A	SNP	PPP2R2C	ENST00000335585	human	ensembl	74_37	-1	known	missense	c.722	p.S241I	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2C	HGNC	ENSG00000074211	tier1	-	-	86	0	0.00	37	4	9.76
MYBPH	0	genome.wustl.edu	37	1	203144809	203144809	+	Silent	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	203144809	203144809	G	A	SNP	MYBPH	ENST00000255416	human	ensembl	74_37	-1	known	silent	c.75	p.P25	0.670	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPH	HGNC	ENSG00000133055	tier1	-	-	157	0	0.00	60	31	34.07
MCU	0	genome.wustl.edu	37	10	74644030	74644030	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	10	74644030	74644030	G	T	SNP	MCU	ENST00000373053	human	ensembl	74_37	+1	known	missense	c.868	p.V290F	1.000	pfam_Coiled-coil-dom_prot_109_C	pfam_Coiled-coil-dom_prot_109_C	-	no_errors	MCU	HGNC	ENSG00000156026	tier1	-	-	84	0	0.00	43	4	8.51
FREM2	0	genome.wustl.edu	37	13	39262454	39262456	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	13	39262454	39262456	ATG	-	DEL	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	in_frame_del	c.973_975	p.M328in_frame_del	1.000:1.000:1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1			62	0	0.00	27	3	10.00
CELSR1	0	genome.wustl.edu	37	22	46776812	46776812	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	22	46776812	46776812	T	C	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.7129	p.T2377A	0.003	pfam_DUF3497	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275	tier1	-	-	81	0	0.00	32	15	31.91
KIT	0	genome.wustl.edu	37	4	55592080	55592080	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	4	55592080	55592080	G	T	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	silent	c.1404	p.P468	0.004	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404	tier1	-	-	40	0	0.00	46	4	8.00
URB2	0	genome.wustl.edu	37	1	229787011	229787011	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	229787011	229787011	G	T	SNP	URB2	ENST00000258243	human	ensembl	74_37	+1	known	missense	c.4179	p.L1393F	0.998	pfam_Urb2/Npa2_C	pfam_Urb2/Npa2_C	-	no_errors	URB2	HGNC	ENSG00000135763	tier1	-	-	100	0	0.00	76	7	8.43
ENSG00000237281	0	genome.wustl.edu	37	2	219215889	219215890	+	RNA	INS	-	-	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	219215889	219215890	-	T	INS	ENSG00000237281	ENST00000411433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.210:0.199	-	-	-	no_errors	AC021016.8	Clone_based_vega_gene	ENSG00000237281	tier1			102	1	0.97	39	4	9.30
LRRC16A	0	genome.wustl.edu	37	6	25510734	25510734	+	Splice_Site	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	25510734	25510734	G	T	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	splice_site	c.1478-1	e19-1	1.000	-	-	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1	-	-	84	0	0.00	44	4	8.33
ZFPM2	0	genome.wustl.edu	37	8	106815148	106815148	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	106815148	106815148	T	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2838	p.S946R	0.499	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	40	0	0.00	22	13	37.14
ENSG00000185710	0	genome.wustl.edu	37	16	21896551	21896551	+	RNA	SNP	A	A	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	16	21896551	21896551	A	T	SNP	ENSG00000185710	ENST00000380598	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-645C24.2	Clone_based_vega_gene	ENSG00000185710	tier1	-	-	172	0	0.00	65	44	40.37
ZAP70	0	genome.wustl.edu	37	2	98351033	98351033	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	2	98351033	98351033	G	A	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	missense	c.940	p.V314M	0.786	superfamily_Kinase-like_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085	tier1	rs200679935	-	45	0	0.00	41	11	20.75
CYFIP2	0	genome.wustl.edu	37	5	156816277	156816277	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	5	156816277	156816277	G	T	SNP	CYFIP2	ENST00000318218	human	ensembl	74_37	+1	known	silent	c.3363	p.L1121	1.000	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	68	0	0.00	41	4	8.89
SLC7A14	0	genome.wustl.edu	37	3	170198390	170198390	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	3	170198390	170198390	T	C	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.1681	p.T561A	0.994	NULL	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293	tier1	-	-	41	0	0.00	13	19	59.38
DCTN3	0	genome.wustl.edu	37	9	34614198	34614198	+	RNA	DEL	A	A	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	34614198	34614198	A	-	DEL	DCTN3	ENST00000479399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	DCTN3	HGNC	ENSG00000137100	tier1			29	0	0.00	19	2	9.52
ANGPT4	0	genome.wustl.edu	37	20	896734	896734	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	20	896734	896734	G	T	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	missense	c.124	p.H42N	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280	tier1	-	-	36	0	0.00	10	7	41.18
OR5M10	0	genome.wustl.edu	37	11	56344488	56344488	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	11	56344488	56344488	G	A	SNP	OR5M10	ENST00000526812	human	ensembl	74_37	-1	known	missense	c.710	p.A237V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M10	HGNC	ENSG00000254834	tier1	-	-	53	0	0.00	31	24	42.86
SLC5A1	0	genome.wustl.edu	37	22	32480510	32480510	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	22	32480510	32480510	C	T	SNP	SLC5A1	ENST00000266088	human	ensembl	74_37	+1	known	missense	c.749	p.T250I	0.027	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A1	HGNC	ENSG00000100170	tier1	-	-	49	0	0.00	16	14	46.67
SCUBE1	0	genome.wustl.edu	37	22	43614417	43614417	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	22	43614417	43614417	G	T	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.1735	p.Q579K	1.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	tier1	-	-	59	0	0.00	26	18	40.91
CD300LB	0	genome.wustl.edu	37	17	72527588	72527588	+	Missense_Mutation	SNP	A	A	C			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	72527588	72527588	A	C	SNP	CD300LB	ENST00000392621	human	ensembl	74_37	-1	known	missense	c.13	p.C5G	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD300LB	HGNC	ENSG00000178789	tier1	-	-	91	0	0.00	34	6	15.00
C9orf3	0	genome.wustl.edu	37	9	97522615	97522615	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	97522615	97522615	A	G	SNP	C9orf3	ENST00000375315	human	ensembl	74_37	+1	known	missense	c.550	p.R184G	0.998	NULL	pfam_Peptidase_M1_N,pfam_Peptidase_M1_C,superfamily_ARM-type_fold	-	no_errors	C9orf3	HGNC	ENSG00000148120	tier1	-	-	49	0	0.00	28	18	39.13
RXRA	0	genome.wustl.edu	37	9	137328845	137328846	+	RNA	INS	-	-	GATGCT			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	9	137328845	137328846	-	GATGCT	INS	RXRA	ENST00000356384	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.011	-	-	-	no_errors	RXRA	HGNC	ENSG00000186350	tier1			NA	NA	NA	NA	NA	NA
FRK	0	genome.wustl.edu	37	6	116289819	116289819	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	6	116289819	116289819	A	-	DEL	FRK	ENST00000606080	human	ensembl	74_37	-1	known	frame_shift_del	c.550	p.S184fs	0.020	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FRK	HGNC	ENSG00000111816	tier1			143	0	0.00	77	34	30.63
DCAF7	0	genome.wustl.edu	37	17	61667286	61667286	+	RNA	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	17	61667286	61667286	G	T	SNP	DCAF7	ENST00000577702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.543	-	-	-	no_errors	DCAF7	HGNC	ENSG00000136485	tier1	-	-	27	0	0.00	36	4	10.00
KCNT2	0	genome.wustl.edu	37	1	196285118	196285118	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	196285118	196285118	G	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.2387	p.A796D	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	42	0	0.00	23	3	11.54
COL22A1	0	genome.wustl.edu	37	8	139707070	139707070	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	139707070	139707070	G	-	DEL	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	frame_shift_del	c.2645	p.P882fs	0.770	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1			56	0	0.00	22	5	18.52
SLC27A6	0	genome.wustl.edu	37	5	128368839	128368839	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	5	128368839	128368839	A	G	SNP	SLC27A6	ENST00000262462	human	ensembl	74_37	+1	known	missense	c.1724	p.H575R	0.615	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A6	HGNC	ENSG00000113396	tier1	-	-	69	0	0.00	113	29	20.42
SACS	0	genome.wustl.edu	37	13	23910319	23910319	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	13	23910319	23910319	C	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.7696	p.D2566N	1.000	superfamily_HATPase_ATP-bd	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	75	0	0.00	11	18	62.07
HP	0	genome.wustl.edu	37	16	72093029	72093029	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	16	72093029	72093029	C	A	SNP	HP	ENST00000355906	human	ensembl	74_37	+1	known	missense	c.384	p.N128K	0.879	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HP	HGNC	ENSG00000257017	tier1	-	-	107	0	0.00	58	22	27.50
ZHX2	0	genome.wustl.edu	37	8	123965961	123965961	+	Silent	SNP	C	C	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	123965961	123965961	C	T	SNP	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	silent	c.2211	p.L737	0.990	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764	tier1	-	-	44	0	0.00	25	9	26.47
MKNK1	0	genome.wustl.edu	37	1	47051606	47051606	+	Silent	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	47051606	47051606	G	A	SNP	MKNK1	ENST00000474868	human	ensembl	74_37	-1	known	silent	c.75	p.V25	0.611	NULL	NULL	-	no_errors	MKNK1	HGNC	ENSG00000079277	tier1	-	-	70	0	0.00	56	26	31.71
ANKRD24	0	genome.wustl.edu	37	19	4216723	4216723	+	Silent	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	19	4216723	4216723	G	A	SNP	ANKRD24	ENST00000318934	human	ensembl	74_37	+1	known	silent	c.1566	p.E522	0.015	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD24	HGNC	ENSG00000089847	tier1	-	-	27	0	0.00	14	9	39.13
KCNB2	0	genome.wustl.edu	37	8	73480416	73480416	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	8	73480416	73480416	C	A	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	missense	c.447	p.N149K	0.175	NULL	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1	-	-	46	0	0.00	39	33	45.83
LRRK1	0	genome.wustl.edu	37	15	101554525	101554525	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	15	101554525	101554525	T	A	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.1424	p.L475H	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	35	0	0.00	27	7	20.59
APLP2	0	genome.wustl.edu	37	11	129993506	129993506	+	Splice_Site	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	11	129993506	129993506	G	A	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	splice_site	c.923-1	e7-1	1.000	-	-	-	no_errors	APLP2	HGNC	ENSG00000084234	tier1	-	-	51	0	0.00	11	3	21.43
ZNF733P	0	genome.wustl.edu	37	7	62752019	62752019	+	RNA	SNP	G	G	A			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	7	62752019	62752019	G	A	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.954	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	tier1	-	-	54	0	0.00	52	19	26.76
OR10T2	0	genome.wustl.edu	37	1	158368465	158368465	+	Silent	SNP	G	G	T			TCGA-3B-A9HQ-01A-11D-A387-09	TCGA-3B-A9HQ-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	5a338e82-a3d9-4fde-a778-541bd843cd68	ec67e62a-ddd3-4fce-babd-48da624ff7d0	1	158368465	158368465	G	T	SNP	OR10T2	ENST00000334438	human	ensembl	74_37	-1	known	silent	c.792	p.S264	0.882	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10T2	HGNC	ENSG00000186306	tier1	-	-	63	0	0.00	57	5	8.06
