Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ANKRD13C	0	genome.wustl.edu	37	1	70790568	70790568	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	70790568	70790568	G	A	SNP	ANKRD13C	ENST00000370944	human	ensembl	74_37	-1	known	missense	c.545	p.A182V	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD13C	HGNC	ENSG00000118454	tier1	-	-	73	0	0.00	57	30	34.48
PPP1R13B	0	genome.wustl.edu	37	14	104205300	104205300	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	104205300	104205300	G	A	SNP	PPP1R13B	ENST00000202556	human	ensembl	74_37	-1	known	missense	c.2653	p.R885W	1.000	superfamily_SH3_domain	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13B	HGNC	ENSG00000088808	tier1	-	-	33	0	0.00	23	12	34.29
LAMB4	0	genome.wustl.edu	37	7	107743555	107743555	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	107743555	107743555	C	T	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.1114	p.D372N	1.000	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	48	0	0.00	34	5	12.82
RNF25	0	genome.wustl.edu	37	2	219528857	219528857	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	219528857	219528857	C	A	SNP	RNF25	ENST00000295704	human	ensembl	74_37	-1	known	missense	c.1203	p.K401N	0.998	NULL	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_RING,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF25	HGNC	ENSG00000163481	tier1	-	-	46	0	0.00	75	9	10.59
SCAMP2	0	genome.wustl.edu	37	15	75142989	75142989	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	75142989	75142989	G	T	SNP	SCAMP2	ENST00000268099	human	ensembl	74_37	-1	known	missense	c.498	p.N166K	1.000	pfam_SCAMP	pfam_SCAMP	-	no_errors	SCAMP2	HGNC	ENSG00000140497	tier1	-	-	34	0	0.00	26	10	27.78
DDX10	0	genome.wustl.edu	37	11	108788634	108788635	+	In_Frame_Ins	INS	-	-	TGA			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	108788634	108788635	-	TGA	INS	DDX10	ENST00000322536	human	ensembl	74_37	+1	known	in_frame_ins	c.2339_2340	p.784in_frame_insD	1.000:0.998	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX10	HGNC	ENSG00000178105	tier1			38	0	0.00	27	9	25.00
ENSG00000272625	0	genome.wustl.edu	37	18	2921524	2921524	+	RNA	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	18	2921524	2921524	T	C	SNP	ENSG00000272625	ENST00000608032	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.922	-	-	-	no_errors	RP11-737O24.5	Clone_based_vega_gene	ENSG00000272625	tier1	-	-	50	0	0.00	36	18	33.33
TMEM79	0	genome.wustl.edu	37	1	156256092	156256092	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	156256092	156256092	C	A	SNP	TMEM79	ENST00000295694	human	ensembl	74_37	+1	known	missense	c.799	p.L267I	0.629	NULL	NULL	-	no_errors	TMEM79	HGNC	ENSG00000163472	tier1	-	-	51	0	0.00	35	9	20.45
WWC1	0	genome.wustl.edu	37	5	167849098	167849098	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	167849098	167849098	A	-	DEL	WWC1	ENST00000265293	human	ensembl	74_37	+1	known	frame_shift_del	c.1270	p.S425fs	1.000	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC1	HGNC	ENSG00000113645	tier1			22	0	0.00	31	8	20.51
MAPT	0	genome.wustl.edu	37	17	44067384	44067384	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	44067384	44067384	C	T	SNP	MAPT	ENST00000344290	human	ensembl	74_37	+1	known	silent	c.1323	p.Y441	1.000	NULL	pfam_MAP_tubulin-bd_rpt,prints_Tau	-	no_errors	MAPT	HGNC	ENSG00000186868	tier1	-	-	47	0	0.00	30	27	47.37
TOR4A	0	genome.wustl.edu	37	9	140173617	140173617	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	140173617	140173617	G	A	SNP	TOR4A	ENST00000357503	human	ensembl	74_37	+1	known	missense	c.476	p.R159H	0.992	pfam_Torsin,superfamily_P-loop_NTPase	pfam_Torsin,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	TOR4A	HGNC	ENSG00000198113	tier1	-	-	21	0	0.00	18	5	21.74
TEX15	0	genome.wustl.edu	37	8	30695394	30695394	+	Silent	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	30695394	30695394	A	G	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	silent	c.7257	p.T2419	0.000	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863	tier1	-	-	87	0	0.00	74	34	31.48
MTSS1	0	genome.wustl.edu	37	8	125570136	125570136	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	125570136	125570136	G	A	SNP	MTSS1	ENST00000520094	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.048	-	-	-	no_errors	MTSS1	HGNC	ENSG00000170873	tier1	-	-	118	0	0.00	135	17	11.18
MRPL42	0	genome.wustl.edu	37	12	93894748	93894748	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	93894748	93894748	A	-	DEL	MRPL42	ENST00000552938	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.008	-	-	-	no_errors	MRPL42	HGNC	ENSG00000198015	tier1			16	0	0.00	23	4	14.81
SEMA6A	0	genome.wustl.edu	37	5	115827498	115827498	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	115827498	115827498	T	A	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	missense	c.473	p.E158V	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421	tier1	-	-	36	0	0.00	39	18	31.58
SORCS3	0	genome.wustl.edu	37	10	107023093	107023093	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	107023093	107023093	C	T	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	silent	c.3630	p.S1210	0.998	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	46	0	0.00	55	9	14.06
CENPH	0	genome.wustl.edu	37	5	68492902	68492902	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	68492902	68492902	A	-	DEL	CENPH	ENST00000283006	human	ensembl	74_37	+1	known	frame_shift_del	c.337	p.N115fs	0.089	NULL	pfam_CENP-H	-	no_errors	CENPH	HGNC	ENSG00000153044	tier1			96	0	0.00	69	17	19.77
UGT3A2	0	genome.wustl.edu	37	5	36035965	36035965	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	36035965	36035965	C	T	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	silent	c.1407	p.T469	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1	rs138782726	-	48	0	0.00	31	9	22.50
GREB1	0	genome.wustl.edu	37	2	11767167	11767167	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	11767167	11767167	G	A	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	silent	c.4386	p.A1462	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	71	0	0.00	44	15	25.42
C2orf73	0	genome.wustl.edu	37	2	54609071	54609071	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	54609071	54609071	T	-	DEL	C2orf73	ENST00000405749	human	ensembl	74_37	+1	putative	frame_shift_del	c.303	p.F103fs	0.000	NULL	NULL	-	no_errors	C2orf73	HGNC	ENSG00000177994	tier1			55	0	0.00	50	30	37.50
CHPF2	0	genome.wustl.edu	37	7	150935093	150935093	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	150935093	150935093	G	A	SNP	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	missense	c.1645	p.A549T	0.830	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100	tier1	-	-	39	0	0.00	23	5	17.86
UGT1A5	0	genome.wustl.edu	37	2	234622355	234622356	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	234622355	234622356	-	AG	INS	UGT1A5	ENST00000373414	human	ensembl	74_37	+1	known	frame_shift_ins	c.718_719	p.V243fs	0.009:0.032	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A5	HGNC	ENSG00000240224	tier1			77	0	0.00	73	8	9.88
ANLN	0	genome.wustl.edu	37	7	36458929	36458929	+	Silent	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	36458929	36458929	T	C	SNP	ANLN	ENST00000265748	human	ensembl	74_37	+1	known	silent	c.1710	p.S570	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	ANLN	HGNC	ENSG00000011426	tier1	-	-	45	0	0.00	37	21	36.21
TERF1	0	genome.wustl.edu	37	8	73958296	73958296	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	73958296	73958296	G	A	SNP	TERF1	ENST00000276603	human	ensembl	74_37	+1	known	missense	c.1244	p.R415Q	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF1	HGNC	ENSG00000147601	tier1	-	-	138	0	0.00	154	28	15.38
THBS4	0	genome.wustl.edu	37	5	79351687	79351687	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	79351687	79351687	G	A	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	silent	c.372	p.R124	0.950	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296	tier1	-	-	31	0	0.00	35	13	27.08
CNNM1	0	genome.wustl.edu	37	10	101147724	101147724	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	101147724	101147724	G	A	SNP	CNNM1	ENST00000356713	human	ensembl	74_37	+1	known	missense	c.2488	p.A830T	0.980	NULL	pfam_DUF21,pfam_CBS_dom	-	no_errors	CNNM1	HGNC	ENSG00000119946	tier1	-	-	73	0	0.00	38	8	17.39
DCAF12	0	genome.wustl.edu	37	9	34098374	34098374	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	34098374	34098374	G	A	SNP	DCAF12	ENST00000361264	human	ensembl	74_37	-1	known	missense	c.743	p.T248I	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12	HGNC	ENSG00000198876	tier1	-	-	49	0	0.00	58	6	9.38
WASH6P	0	genome.wustl.edu	37	X	155251290	155251292	+	RNA	DEL	AGG	AGG	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	155251290	155251292	AGG	-	DEL	WASH6P	ENST00000461007	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.512:0.578:0.601	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	tier1			9	0	0.00	5	7	58.33
TICRR	0	genome.wustl.edu	37	15	90166933	90166933	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	90166933	90166933	C	T	SNP	TICRR	ENST00000268138	human	ensembl	74_37	+1	known	missense	c.3392	p.P1131L	0.001	NULL	NULL	-	no_errors	TICRR	HGNC	ENSG00000140534	tier1	rs201365800	-	61	0	0.00	35	26	42.62
KIF17	0	genome.wustl.edu	37	1	21036298	21036298	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	21036298	21036298	G	A	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	silent	c.504	p.G168	0.120	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245	tier1	rs144285910	GMAF=0.0005	15	0	0.00	10	7	41.18
CERK	0	genome.wustl.edu	37	22	47095308	47095308	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	47095308	47095308	C	T	SNP	CERK	ENST00000216264	human	ensembl	74_37	-1	known	missense	c.845	p.R282H	0.988	NULL	pfam_Diacylglycerol_kinase_cat_dom,superfamily_ATP-NAD_kinase_PpnK-typ,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	CERK	HGNC	ENSG00000100422	tier1	-	-	45	0	0.00	36	7	16.28
CYP11B2	0	genome.wustl.edu	37	8	143996608	143996608	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	143996608	143996608	G	A	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	missense	c.449	p.S150L	0.139	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	43	0	0.00	36	6	14.29
ZSCAN32	0	genome.wustl.edu	37	16	3447510	3447510	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	3447510	3447510	C	A	SNP	ZSCAN32	ENST00000396846	human	ensembl	74_37	-1	known	missense	c.48	p.K16N	0.001	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN32	HGNC	ENSG00000140987	tier1	-	-	29	0	0.00	45	4	8.16
ENO4	0	genome.wustl.edu	37	10	118618628	118618628	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	118618628	118618628	A	-	DEL	ENO4	ENST00000341276	human	ensembl	74_37	+1	known	frame_shift_del	c.616	p.K208fs	0.942	NULL	pfam_Enolase_C,pfam_Enolase_N	-	no_errors	ENO4	HGNC	ENSG00000188316	tier1			113	0	0.00	73	32	30.48
RIN3	0	genome.wustl.edu	37	14	93107613	93107613	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	93107613	93107613	C	T	SNP	RIN3	ENST00000555589	human	ensembl	74_37	+1	known	missense	c.398	p.P133L	1.000	NULL	NULL	-	no_errors	RIN3	HGNC	ENSG00000100599	tier1	-	-	39	0	0.00	23	6	20.69
CYP11B1	0	genome.wustl.edu	37	8	143957223	143957223	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	143957223	143957223	C	A	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	missense	c.1026	p.Q342H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882	tier1	-	-	59	0	0.00	46	15	24.59
STAB2	0	genome.wustl.edu	37	12	104015858	104015858	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	104015858	104015858	C	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	silent	c.456	p.D152	0.866	smart_EGF_laminin	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	55	0	0.00	52	34	39.53
ZNF235	0	genome.wustl.edu	37	19	44791889	44791889	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	44791889	44791889	C	T	SNP	ZNF235	ENST00000291182	human	ensembl	74_37	-1	known	missense	c.1699	p.G567R	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF235	HGNC	ENSG00000159917	tier1	-	-	19	0	0.00	29	16	35.56
MAMLD1	0	genome.wustl.edu	37	X	149639409	149639409	+	Missense_Mutation	SNP	A	A	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	149639409	149639409	A	T	SNP	MAMLD1	ENST00000432680	human	ensembl	74_37	+1	known	missense	c.1489	p.M497L	0.987	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619	tier1	-	-	12	0	0.00	17	4	19.05
HNRNPR	0	genome.wustl.edu	37	1	23670794	23670794	+	RNA	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	23670794	23670794	C	-	DEL	HNRNPR	ENST00000490652	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HNRNPR	HGNC	ENSG00000125944	tier1			80	0	0.00	38	8	17.39
TMCO5B	0	genome.wustl.edu	37	15	33529073	33529073	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	33529073	33529073	G	A	SNP	TMCO5B	ENST00000529696	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	TMCO5B	HGNC	ENSG00000215296	tier1	-	-	42	0	0.00	37	10	21.28
SCAMP1	0	genome.wustl.edu	37	5	77684680	77684680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	77684680	77684680	T	-	DEL	SCAMP1	ENST00000538629	human	ensembl	74_37	+1	known	frame_shift_del	c.77	p.V26fs	1.000	NULL	pfam_SCAMP	-	no_errors	SCAMP1	HGNC	ENSG00000085365	tier1			159	0	0.00	136	43	24.02
GRWD1	0	genome.wustl.edu	37	19	48956136	48956136	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	48956136	48956136	G	A	SNP	GRWD1	ENST00000253237	human	ensembl	74_37	+1	known	missense	c.1195	p.G399R	0.127	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Histone-bd_RBBP4_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	GRWD1	HGNC	ENSG00000105447	tier1	-	-	18	0	0.00	21	6	22.22
DENND6A	0	genome.wustl.edu	37	3	57619022	57619023	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	57619022	57619023	-	A	INS	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	frame_shift_ins	c.1323_1322	p.L441fs	1.000:1.000	pfam_Afi1_N	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839	tier1			142	0	0.00	99	12	10.81
NOS1	0	genome.wustl.edu	37	12	117768335	117768335	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	117768335	117768335	G	-	DEL	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	frame_shift_del	c.540	p.R181fs	0.349	pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	tier1			31	0	0.00	27	6	18.18
CLU	0	genome.wustl.edu	37	8	27462569	27462569	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	27462569	27462569	G	A	SNP	CLU	ENST00000560366	human	ensembl	74_37	-1	known	missense	c.857	p.P286L	0.000	pfam_Clusterin-like,smart_Clusterin_C	pfam_Clusterin-like,smart_Clusterin_N,smart_Clusterin_C	-	no_errors	CLU	HGNC	ENSG00000120885	tier1	-	-	40	0	0.00	44	10	18.52
ZFHX2	0	genome.wustl.edu	37	14	23994760	23994760	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	23994760	23994760	G	-	DEL	ZFHX2	ENST00000419474	human	ensembl	74_37	-1	known	frame_shift_del	c.4391	p.P1464fs	0.930	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC	ENSG00000136367	tier1			45	0	0.00	43	16	27.12
ENSG00000216020	0	genome.wustl.edu	37	3	191693737	191693749	+	RNA	DEL	TCTCTCCGTGTGT	TCTCTCCGTGTGT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TCTCTCCGTGTGT	TCTCTCCGTGTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	191693737	191693749	TCTCTCCGTGTGT	-	DEL	ENSG00000216020	ENST00000401201	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003:0.003:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	AC026320.1	Clone_based_ensembl_gene	ENSG00000216020	tier1			NA	NA	NA	NA	NA	NA
HEATR5B	0	genome.wustl.edu	37	2	37295977	37295977	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	37295977	37295977	G	A	SNP	HEATR5B	ENST00000233099	human	ensembl	74_37	-1	known	missense	c.1024	p.R342W	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5B	HGNC	ENSG00000008869	tier1	-	-	56	0	0.00	62	17	21.52
CSGALNACT1	0	genome.wustl.edu	37	8	19363317	19363317	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	19363317	19363317	G	A	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	missense	c.29	p.A10V	0.905	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	tier1	-	-	27	0	0.00	19	4	17.39
TTC21A	0	genome.wustl.edu	37	3	39174499	39174499	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	39174499	39174499	G	A	SNP	TTC21A	ENST00000493856	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC21A	HGNC	ENSG00000168026	tier1	-	-	97	0	0.00	114	12	9.52
PPM1H	0	genome.wustl.edu	37	12	63042336	63042336	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	63042336	63042336	C	T	SNP	PPM1H	ENST00000228705	human	ensembl	74_37	-1	known	missense	c.1478	p.R493Q	1.000	superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1H	HGNC	ENSG00000111110	tier1	-	-	29	0	0.00	22	18	45.00
ACOT11	0	genome.wustl.edu	37	1	55050452	55050452	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	55050452	55050452	T	C	SNP	ACOT11	ENST00000371316	human	ensembl	74_37	+1	known	missense	c.158	p.V53A	1.000	NULL	pfam_START_lipid-bd_dom,pfam_Thioestr_supf,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT11	HGNC	ENSG00000162390	tier1	-	-	53	0	0.00	45	8	14.81
PLEKHG5	0	genome.wustl.edu	37	1	6529145	6529145	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	6529145	6529145	T	C	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	missense	c.2443	p.T815A	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680	tier1	-	-	28	0	0.00	14	3	17.65
ENSG00000221538	0	genome.wustl.edu	37	1	111195567	111195582	+	RNA	DEL	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	111195567	111195582	TGTGTGTGTGTGTGTG	-	DEL	ENSG00000221538	ENST00000408611	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.005:0.004:0.004:0.002:0.002:0.000:0.000:0.000:0.001:0.000:0.002:0.002:0.002:0.000:0.000:0.000	-	-	-	no_errors	AL365361.1	Clone_based_ensembl_gene	ENSG00000221538	tier1			NA	NA	NA	NA	NA	NA
SETD1B	0	genome.wustl.edu	37	12	122242658	122242658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	122242658	122242658	C	-	DEL	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	frame_shift_del	c.15	p.H8fs	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	tier1			128	1	0.78	53	31	36.90
SLC22A16	0	genome.wustl.edu	37	6	110768131	110768131	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	110768131	110768131	G	A	SNP	SLC22A16	ENST00000368919	human	ensembl	74_37	-1	known	missense	c.596	p.A199V	0.268	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A16	HGNC	ENSG00000004809	tier1	-	-	37	0	0.00	27	19	41.30
PTK2B	0	genome.wustl.edu	37	8	27296914	27296914	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	27296914	27296914	C	T	SNP	PTK2B	ENST00000346049	human	ensembl	74_37	+1	known	silent	c.1833	p.F611	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Focal_adhesion_kin_target_dom,pfam_Prot_kinase_dom,pfam_FERM_central,superfamily_Kinase-like_dom,superfamily_Focal_adhesion_kin_target_dom,superfamily_FERM_central,smart_Band_41_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK2B	HGNC	ENSG00000120899	tier1	-	-	17	0	0.00	15	14	48.28
MRPL35	0	genome.wustl.edu	37	2	86437709	86437709	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	86437709	86437709	C	T	SNP	MRPL35	ENST00000337109	human	ensembl	74_37	+1	known	missense	c.485	p.T162M	1.000	pfam_Ribosomal_L35	pfam_Ribosomal_L35	-	no_errors	MRPL35	HGNC	ENSG00000132313	tier1	-	-	53	0	0.00	50	31	38.27
C3orf20	0	genome.wustl.edu	37	3	14724444	14724444	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	14724444	14724444	C	-	DEL	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	frame_shift_del	c.224	p.L77fs	0.006	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379	tier1			38	0	0.00	21	5	19.23
CENPW	0	genome.wustl.edu	37	6	126661509	126661509	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	126661509	126661509	G	A	SNP	CENPW	ENST00000368325	human	ensembl	74_37	+1	known	silent	c.90	p.K30	0.999	NULL	NULL	-	no_errors	CENPW	HGNC	ENSG00000203760	tier1	-	-	101	0	0.00	69	8	10.39
TGM6	0	genome.wustl.edu	37	20	2384053	2384053	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	2384053	2384053	G	T	SNP	TGM6	ENST00000202625	human	ensembl	74_37	+1	known	missense	c.1000	p.V334F	1.000	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM6	HGNC	ENSG00000166948	tier1	-	-	55	0	0.00	38	4	9.52
CEP152	0	genome.wustl.edu	37	15	49030471	49030471	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	49030471	49030471	T	A	SNP	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	missense	c.5108	p.D1703V	1.000	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995	tier1	-	-	66	0	0.00	58	23	28.40
CAMK2G	0	genome.wustl.edu	37	10	75599351	75599351	+	Nonsense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	75599351	75599351	G	A	SNP	CAMK2G	ENST00000423381	human	ensembl	74_37	-1	known	nonsense	c.955	p.Q319*	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2G	HGNC	ENSG00000148660	tier1	-	-	19	0	0.00	6	6	50.00
XPNPEP1	0	genome.wustl.edu	37	10	111643880	111643880	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	111643880	111643880	C	T	SNP	XPNPEP1	ENST00000502935	human	ensembl	74_37	-1	known	missense	c.775	p.V259M	1.000	NULL	pfam_Pept_M24_structural-domain,pfam_Creatinase,superfamily_Pept_M24_structural-domain	-	no_errors	XPNPEP1	HGNC	ENSG00000108039	tier1	-	-	48	0	0.00	38	4	9.52
NCAM1	0	genome.wustl.edu	37	11	113102894	113102894	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	113102894	113102894	G	A	SNP	NCAM1	ENST00000316851	human	ensembl	74_37	+1	known	missense	c.1213	p.A405T	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM1	HGNC	ENSG00000149294	tier1	-	-	28	0	0.00	21	7	24.14
SEPT4	0	genome.wustl.edu	37	17	56599400	56599400	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	56599400	56599400	C	T	SNP	SEPT4	ENST00000457347	human	ensembl	74_37	-1	known	missense	c.770	p.G257D	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	-	no_errors	SEPT4	HGNC	ENSG00000108387	tier1	-	-	36	0	0.00	38	4	9.52
TAF10	0	genome.wustl.edu	37	11	6632451	6632451	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	6632451	6632451	G	A	SNP	TAF10	ENST00000299424	human	ensembl	74_37	-1	known	missense	c.536	p.T179M	1.000	pirsf_TFIID_30kDa	pfam_TFIID_30kDa,pirsf_TFIID_30kDa,prints_TFIID_30kDa	-	no_errors	TAF10	HGNC	ENSG00000166337	tier1	-	-	30	0	0.00	14	8	36.36
IPO4	0	genome.wustl.edu	37	14	24655084	24655084	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	24655084	24655084	G	A	SNP	IPO4	ENST00000354464	human	ensembl	74_37	-1	known	silent	c.1152	p.G384	0.001	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	IPO4	HGNC	ENSG00000196497	tier1	-	-	13	0	0.00	13	14	51.85
MACF1	0	genome.wustl.edu	37	1	39800065	39800065	+	Missense_Mutation	SNP	G	G	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	39800065	39800065	G	C	SNP	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	missense	c.7916	p.G2639A	0.860	pfam_Plectin_repeat,superfamily_RNaseH-like_dom,smart_Plectin_repeat	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	59	0	0.00	54	15	21.74
NUP93	0	genome.wustl.edu	37	16	56867314	56867314	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	56867314	56867314	G	T	SNP	NUP93	ENST00000308159	human	ensembl	74_37	+1	known	missense	c.1533	p.Q511H	1.000	pfam_Nucleoporin_int_Nup93/Nic96	pfam_Nucleoporin_int_Nup93/Nic96	-	no_errors	NUP93	HGNC	ENSG00000102900	tier1	-	-	22	0	0.00	23	13	36.11
KIRREL	0	genome.wustl.edu	37	1	158058203	158058203	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	158058203	158058203	C	-	DEL	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	frame_shift_del	c.1003	p.L337fs	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853	tier1			109	0	0.00	94	13	12.15
COX7A2L	0	genome.wustl.edu	37	2	42578275	42578275	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	42578275	42578275	A	-	DEL	COX7A2L	ENST00000482463	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COX7A2L	HGNC	ENSG00000115944	tier1			21	0	0.00	24	6	20.00
ABCF1	0	genome.wustl.edu	37	6	30552061	30552061	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	30552061	30552061	G	A	SNP	ABCF1	ENST00000326195	human	ensembl	74_37	+1	known	missense	c.1195	p.G399R	0.997	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF1	HGNC	ENSG00000204574	tier1	-	-	35	0	0.00	20	10	33.33
DNAJC24	0	genome.wustl.edu	37	11	31447933	31447934	+	RNA	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	31447933	31447934	-	A	INS	DNAJC24	ENST00000524747	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	DNAJC24	HGNC	ENSG00000170946	tier1			33	0	0.00	29	6	17.14
SLC9A9	0	genome.wustl.edu	37	3	143185954	143185954	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	143185954	143185954	G	A	SNP	SLC9A9	ENST00000316549	human	ensembl	74_37	-1	known	missense	c.1394	p.T465M	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A9	HGNC	ENSG00000181804	tier1	-	-	61	0	0.00	43	27	38.57
CIB4	0	genome.wustl.edu	37	2	26852317	26852317	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	26852317	26852317	C	T	SNP	CIB4	ENST00000288861	human	ensembl	74_37	-1	known	silent	c.147	p.T49	0.005	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CIB4	HGNC	ENSG00000157884	tier1	-	-	30	0	0.00	26	7	21.21
EXOC2	0	genome.wustl.edu	37	6	637794	637794	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	637794	637794	G	-	DEL	EXOC2	ENST00000230449	human	ensembl	74_37	-1	known	frame_shift_del	c.25	p.V10fs	0.974	pfam_IPT,superfamily_Ig_E-set	pfam_IPT,superfamily_Ig_E-set,superfamily_Cullin_repeat-like_dom	-	no_errors	EXOC2	HGNC	ENSG00000112685	tier1			40	0	0.00	39	7	15.22
OR2T4	0	genome.wustl.edu	37	1	248525879	248525879	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	248525879	248525879	C	T	SNP	OR2T4	ENST00000366475	human	ensembl	74_37	+1	known	silent	c.997	p.L333	0.008	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944	tier1	-	-	125	0	0.00	104	18	14.63
EXPH5	0	genome.wustl.edu	37	11	108384793	108384793	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	108384793	108384793	A	-	DEL	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	frame_shift_del	c.1441	p.W481fs	0.808	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723	tier1			42	0	0.00	36	5	12.20
DAPK1	0	genome.wustl.edu	37	9	90321168	90321168	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	90321168	90321168	G	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.3257	p.R1086Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	67	0	0.00	39	13	24.53
C2orf27A	0	genome.wustl.edu	37	2	132509237	132509237	+	RNA	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	132509237	132509237	A	G	SNP	C2orf27A	ENST00000463645	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.226	-	-	-	no_errors	C2orf27A	HGNC	ENSG00000197927	tier1	-	-	270	0	0.00	205	87	29.79
NCOA5	0	genome.wustl.edu	37	20	44698964	44698964	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	44698964	44698964	C	T	SNP	NCOA5	ENST00000290231	human	ensembl	74_37	-1	known	missense	c.250	p.V84M	0.999	NULL	superfamily_Anticodon-bd	-	no_errors	NCOA5	HGNC	ENSG00000124160	tier1	-	-	34	0	0.00	30	8	21.05
RTEL1	0	genome.wustl.edu	37	20	62294213	62294213	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	62294213	62294213	G	A	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	missense	c.509	p.R170H	1.000	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1	-	-	20	0	0.00	24	17	41.46
MAP3K9	0	genome.wustl.edu	37	14	71199670	71199670	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	71199670	71199670	G	A	SNP	MAP3K9	ENST00000555993	human	ensembl	74_37	-1	known	missense	c.2458	p.R820W	0.996	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_Regulat_G_prot_signal_superfam,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432	tier1	-	-	49	0	0.00	44	11	20.00
LPPR2	0	genome.wustl.edu	37	19	11473210	11473210	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	11473210	11473210	C	T	SNP	LPPR2	ENST00000591608	human	ensembl	74_37	+1	known	missense	c.610	p.R204C	0.999	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	DKFZP761J1410	Uniprot_gn	ENSG00000105520	tier1	-	-	42	0	0.00	16	18	52.94
SEPT5	0	genome.wustl.edu	37	22	19707184	19707184	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	19707184	19707184	G	A	SNP	SEPT5	ENST00000383045	human	ensembl	74_37	+1	known	silent	c.141	p.S47	0.003	pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT5	HGNC	ENSG00000184702	tier1	rs142143618	-	53	0	0.00	40	4	9.09
WDR47	0	genome.wustl.edu	37	1	109554234	109554234	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	109554234	109554234	C	T	SNP	WDR47	ENST00000400794	human	ensembl	74_37	-1	known	missense	c.455	p.R152H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR47	HGNC	ENSG00000085433	tier1	-	-	92	0	0.00	59	33	35.87
OR1C1	0	genome.wustl.edu	37	1	247921501	247921501	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	247921501	247921501	C	G	SNP	OR1C1	ENST00000408896	human	ensembl	74_37	-1	known	missense	c.208	p.D70H	0.980	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1C1	HGNC	ENSG00000221888	tier1	-	-	61	0	0.00	54	22	28.95
ARHGEF10L	0	genome.wustl.edu	37	1	17953982	17953982	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	17953982	17953982	G	A	SNP	ARHGEF10L	ENST00000361221	human	ensembl	74_37	+1	known	missense	c.1568	p.R523H	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10L	HGNC	ENSG00000074964	tier1	-	-	33	0	0.00	16	16	50.00
GPR135	0	genome.wustl.edu	37	14	59930509	59930509	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	59930509	59930509	G	A	SNP	GPR135	ENST00000395116	human	ensembl	74_37	-1	known	missense	c.1436	p.T479M	0.122	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR135	HGNC	ENSG00000181619	tier1	-	-	39	0	0.00	20	20	50.00
SEZ6L	0	genome.wustl.edu	37	22	26688805	26688805	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	26688805	26688805	C	T	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.528	p.S176	0.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095	tier1	-	-	91	0	0.00	52	18	25.71
CDH10	0	genome.wustl.edu	37	5	24488218	24488219	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	24488218	24488219	-	T	INS	CDH10	ENST00000264463	human	ensembl	74_37	-1	known	frame_shift_ins	c.1921_1920	p.E640fs	1.000:1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH10	HGNC	ENSG00000040731	tier1			32	0	0.00	43	8	15.69
CCDC108	0	genome.wustl.edu	37	2	219890791	219890791	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	219890791	219890791	C	T	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	missense	c.2302	p.A768T	0.000	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378	tier1	-	-	37	0	0.00	38	4	9.52
BCOR	0	genome.wustl.edu	37	X	39933594	39933594	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	39933594	39933594	G	-	DEL	BCOR	ENST00000378444	human	ensembl	74_37	-1	known	frame_shift_del	c.1005	p.S336fs	0.954	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCOR	HGNC	ENSG00000183337	tier1			26	0	0.00	32	7	17.95
SEMA3D	0	genome.wustl.edu	37	7	84651785	84651785	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	84651785	84651785	C	T	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.1336	p.D446N	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993	tier1	-	-	31	0	0.00	39	21	35.00
CACNA1F	0	genome.wustl.edu	37	X	49068717	49068717	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	49068717	49068717	C	T	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.4027	p.V1343I	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	rs151203138	-	23	0	0.00	15	18	54.55
TOX3	0	genome.wustl.edu	37	16	52473616	52473616	+	Missense_Mutation	SNP	A	A	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	52473616	52473616	A	T	SNP	TOX3	ENST00000219746	human	ensembl	74_37	-1	known	missense	c.1252	p.S418T	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX3	HGNC	ENSG00000103460	tier1	-	-	46	0	0.00	21	23	52.27
CHRFAM7A	0	genome.wustl.edu	37	15	30664359	30664361	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	30664359	30664361	TCT	-	DEL	CHRFAM7A	ENST00000299847	human	ensembl	74_37	-1	known	in_frame_del	c.514_512	p.K171in_frame_del	1.000:1.000:1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	-	no_errors	CHRFAM7A	HGNC	ENSG00000166664	tier1			20	0	0.00	9	8	47.06
SKA3	0	genome.wustl.edu	37	13	21746492	21746492	+	Missense_Mutation	SNP	A	A	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	21746492	21746492	A	T	SNP	SKA3	ENST00000314759	human	ensembl	74_37	-1	known	missense	c.317	p.V106D	0.015	NULL	NULL	-	no_errors	SKA3	HGNC	ENSG00000165480	tier1	-	-	102	0	0.00	68	8	10.53
EDC3	0	genome.wustl.edu	37	15	74932873	74932873	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	74932873	74932873	C	T	SNP	EDC3	ENST00000315127	human	ensembl	74_37	-1	known	missense	c.908	p.R303Q	1.000	pfam_YjeF_N_dom,superfamily_YjeF_N_dom	pfam_YjeF_N_dom,pfam_FDF_dom,superfamily_YjeF_N_dom	-	no_errors	EDC3	HGNC	ENSG00000179151	tier1	-	-	29	0	0.00	27	17	38.64
PITPNM2	0	genome.wustl.edu	37	12	123489025	123489025	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	123489025	123489025	G	A	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.964	p.R322C	1.000	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975	tier1	-	-	38	0	0.00	27	5	15.62
NOB1	0	genome.wustl.edu	37	16	69782978	69782980	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	69782978	69782980	TCC	-	DEL	NOB1	ENST00000268802	human	ensembl	74_37	-1	known	in_frame_del	c.569_567	p.E191in_frame_del	0.032:0.038:0.042	pirsf_D-site_20S_pre-rRNA_nuclease	pfam_NOB1_Zn-bd,smart_PIN_dom,pirsf_D-site_20S_pre-rRNA_nuclease	-	no_errors	NOB1	HGNC	ENSG00000141101	tier1			15	0	0.00	18	3	14.29
CAMTA2	0	genome.wustl.edu	37	17	4875806	4875806	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	4875806	4875806	C	T	SNP	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	silent	c.2598	p.S866	0.623	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509	tier1	-	-	17	0	0.00	19	11	36.67
LTN1	0	genome.wustl.edu	37	21	30339206	30339206	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	21	30339206	30339206	T	-	DEL	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	frame_shift_del	c.1745	p.N582fs	0.000	superfamily_ARM-type_fold	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862	tier1			39	0	0.00	55	10	15.38
COX16	0	genome.wustl.edu	37	14	70793016	70793017	+	RNA	DEL	AA	AA	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	70793016	70793017	AA	-	DEL	COX16	ENST00000557612	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	COX16	HGNC	ENSG00000133983	tier1			114	0	0.00	106	23	17.83
ENSG00000223697	0	genome.wustl.edu	37	8	133854715	133854715	+	RNA	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	133854715	133854715	T	-	DEL	ENSG00000223697	ENST00000608375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AF230666.2	Clone_based_vega_gene	ENSG00000223697	tier1			18	0	0.00	40	11	21.57
ST6GAL1	0	genome.wustl.edu	37	3	186760953	186760953	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	186760953	186760953	G	A	SNP	ST6GAL1	ENST00000169298	human	ensembl	74_37	+1	known	silent	c.462	p.E154	0.992	pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST6GAL1	HGNC	ENSG00000073849	tier1	-	-	24	0	0.00	24	11	31.43
FBLN1	0	genome.wustl.edu	37	22	45938049	45938049	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	45938049	45938049	G	A	SNP	FBLN1	ENST00000327858	human	ensembl	74_37	+1	known	missense	c.1081	p.A361T	0.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Fibulin-1,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,smart_Anaphylatoxin/fibulin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_Fibulin-1,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN1	HGNC	ENSG00000077942	tier1	-	-	36	0	0.00	40	16	28.57
EIF2AK3	0	genome.wustl.edu	37	2	88885453	88885453	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	88885453	88885453	A	-	DEL	EIF2AK3	ENST00000303236	human	ensembl	74_37	-1	known	frame_shift_del	c.1556	p.L519fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK3	HGNC	ENSG00000172071	tier1			77	0	0.00	70	38	35.19
NKD1	0	genome.wustl.edu	37	16	50666204	50666204	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	50666204	50666204	C	T	SNP	NKD1	ENST00000268459	human	ensembl	74_37	+1	known	silent	c.708	p.D236	0.998	NULL	pfscan_EF_hand_dom	-	no_errors	NKD1	HGNC	ENSG00000140807	tier1	-	-	32	0	0.00	25	6	19.35
ANKRD13B	0	genome.wustl.edu	37	17	27935228	27935228	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	27935228	27935228	G	A	SNP	ANKRD13B	ENST00000394859	human	ensembl	74_37	+1	known	missense	c.391	p.V131M	1.000	NULL	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ubiquitin-int_motif,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin-int_motif	-	no_errors	ANKRD13B	HGNC	ENSG00000198720	tier1	-	-	64	0	0.00	19	13	40.62
FAM105B	0	genome.wustl.edu	37	5	14692978	14692978	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	14692978	14692978	C	T	SNP	FAM105B	ENST00000284274	human	ensembl	74_37	+1	known	missense	c.880	p.L294F	1.000	prints_FAM105	prints_FAM105,prints_FAM105B,prints_FAM105A	-	no_errors	FAM105B	HGNC	ENSG00000154124	tier1	-	-	28	0	0.00	25	15	37.50
RARS	0	genome.wustl.edu	37	5	167946112	167946112	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	167946112	167946112	C	T	SNP	RARS	ENST00000231572	human	ensembl	74_37	+1	known	missense	c.1900	p.R634C	1.000	pfam_DALR_anticod-bd,superfamily_tRNAsynth_1a_anticodon-bd,smart_DALR_anticod-bd,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS	HGNC	ENSG00000113643	tier1	-	-	85	0	0.00	83	15	15.15
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	tier1			25	0	0.00	32	7	17.95
MYO16	0	genome.wustl.edu	37	13	109779832	109779832	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	109779832	109779832	C	T	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.3919	p.R1307W	0.983	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1	-	-	114	0	0.00	33	21	38.89
ARHGAP12	0	genome.wustl.edu	37	10	32096466	32096466	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	32096466	32096466	A	-	DEL	ARHGAP12	ENST00000492028	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.771	-	-	-	no_errors	ARHGAP12	HGNC	ENSG00000165322	tier1			53	0	0.00	52	18	25.71
DNMT3A	0	genome.wustl.edu	37	2	25464487	25464487	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	25464487	25464487	G	A	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	missense	c.2026	p.R676W	1.000	pfam_C5_MeTfrase	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772	tier1	-	-	13	0	0.00	14	10	41.67
MYO10	0	genome.wustl.edu	37	5	16670877	16670877	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	16670877	16670877	G	A	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	missense	c.5641	p.R1881W	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555	tier1	-	-	29	0	0.00	28	7	19.44
LHX1	0	genome.wustl.edu	37	17	35300394	35300395	+	Frame_Shift_Ins	INS	-	-	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	35300394	35300395	-	C	INS	LHX1	ENST00000254457	human	ensembl	74_37	+1	known	frame_shift_ins	c.1187_1188	p.E399fs	1.000:1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX1	HGNC	ENSG00000132130	tier1			56	0	0.00	31	15	32.61
ENSG00000223579	0	genome.wustl.edu	37	22	20640727	20640727	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	20640727	20640727	G	A	SNP	ENSG00000223579	ENST00000577456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062	-	-	-	no_errors	AC011718.2	Clone_based_vega_gene	ENSG00000223579	tier1	-	-	75	0	0.00	52	7	11.67
MPZL1	0	genome.wustl.edu	37	1	167745358	167745358	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	167745358	167745358	C	T	SNP	MPZL1	ENST00000359523	human	ensembl	74_37	+1	known	silent	c.663	p.S221	0.997	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Myelin_P0	-	no_errors	MPZL1	HGNC	ENSG00000197965	tier1	-	-	43	0	0.00	31	15	32.61
FLJ27255	0	genome.wustl.edu	37	6	160010034	160010034	+	RNA	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	160010034	160010034	C	-	DEL	FLJ27255	ENST00000430078	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP3-393E18.2	Clone_based_vega_gene	ENSG00000237927	tier1			29	0	0.00	20	8	28.57
BAIAP2	0	genome.wustl.edu	37	17	79027510	79027510	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	79027510	79027510	G	A	SNP	BAIAP2	ENST00000321300	human	ensembl	74_37	+1	known	missense	c.97	p.A33T	1.000	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2	HGNC	ENSG00000175866	tier1	-	-	49	0	0.00	54	12	17.91
COL7A1	0	genome.wustl.edu	37	3	48626118	48626118	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	48626118	48626118	G	A	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	silent	c.2544	p.V848	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	tier1	rs139545952	GMAF=0.0005	26	0	0.00	21	13	38.24
PDE4B	0	genome.wustl.edu	37	1	66834587	66834587	+	Silent	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	66834587	66834587	C	A	SNP	PDE4B	ENST00000329654	human	ensembl	74_37	+1	known	silent	c.1780	p.R594	0.998	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4B	HGNC	ENSG00000184588	tier1	-	-	50	0	0.00	36	25	40.98
OR5D18	0	genome.wustl.edu	37	11	55587910	55587910	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	55587910	55587910	A	G	SNP	OR5D18	ENST00000333976	human	ensembl	74_37	+1	known	missense	c.805	p.R269G	0.096	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D18	HGNC	ENSG00000186119	tier1	-	-	32	0	0.00	26	4	13.33
MDC1	0	genome.wustl.edu	37	6	30671546	30671546	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	30671546	30671546	G	T	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.5414	p.P1805H	0.034	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337	tier1	-	-	33	0	0.00	31	4	11.43
TLN1	0	genome.wustl.edu	37	9	35705597	35705597	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	35705597	35705597	C	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.5684	p.R1895H	0.971	pfam_Vinculin-bd_dom,superfamily_Vinculin/catenin	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076	tier1	-	-	37	0	0.00	17	11	39.29
CSPG5	0	genome.wustl.edu	37	3	47618363	47618363	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	47618363	47618363	C	T	SNP	CSPG5	ENST00000383738	human	ensembl	74_37	-1	known	missense	c.1153	p.G385S	1.000	NULL	pfam_Chon_Sulph_att,pfam_Neural_ProG_Cyt	-	no_errors	CSPG5	HGNC	ENSG00000114646	tier1	-	-	27	0	0.00	20	15	42.86
BDH2	0	genome.wustl.edu	37	4	104012389	104012389	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	104012389	104012389	G	A	SNP	BDH2	ENST00000296424	human	ensembl	74_37	-1	known	missense	c.302	p.S101L	1.000	pfam_DH_sc/Rdtase_SDR,prints_DHB_DH	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	BDH2	HGNC	ENSG00000164039	tier1	-	-	30	0	0.00	33	4	10.81
BSG	0	genome.wustl.edu	37	19	577972	577972	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	577972	577972	C	T	SNP	BSG	ENST00000333511	human	ensembl	74_37	+1	known	missense	c.266	p.A89V	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BSG	HGNC	ENSG00000172270	tier1	-	-	76	0	0.00	50	5	9.09
TFCP2L1	0	genome.wustl.edu	37	2	122000043	122000043	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	122000043	122000043	C	T	SNP	TFCP2L1	ENST00000263707	human	ensembl	74_37	-1	known	silent	c.660	p.P220	0.294	pfam_CP2	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2L1	HGNC	ENSG00000115112	tier1	-	-	28	0	0.00	33	4	10.81
SPRY1	0	genome.wustl.edu	37	4	124322769	124322769	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	124322769	124322769	G	T	SNP	SPRY1	ENST00000339241	human	ensembl	74_37	+1	known	missense	c.23	p.G8V	1.000	NULL	pfam_Sprouty	-	no_errors	SPRY1	HGNC	ENSG00000164056	tier1	-	-	35	0	0.00	37	4	9.76
FJX1	0	genome.wustl.edu	37	11	35642248	35642249	+	RNA	DEL	AA	AA	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	35642248	35642249	AA	-	DEL	FJX1	ENST00000532914	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FJX1	HGNC	ENSG00000179431	tier1			92	0	0.00	57	16	21.92
AHNAK2	0	genome.wustl.edu	37	14	105415468	105415468	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	105415468	105415468	A	G	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.6320	p.M2107T	0.001	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	70	0	0.00	68	14	17.07
ING2	0	genome.wustl.edu	37	4	184432081	184432081	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	184432081	184432081	A	-	DEL	ING2	ENST00000302327	human	ensembl	74_37	+1	known	frame_shift_del	c.819	p.K275fs	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING2	HGNC	ENSG00000168556	tier1			71	0	0.00	61	18	22.78
ZNF563	0	genome.wustl.edu	37	19	12430216	12430217	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	12430216	12430217	-	A	INS	ZNF563	ENST00000293725	human	ensembl	74_37	-1	known	frame_shift_ins	c.623_622	p.W208fs	0.001:0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF563	HGNC	ENSG00000188868	tier1			138	1	0.72	118	15	11.28
NEK10	0	genome.wustl.edu	37	3	27216186	27216186	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	27216186	27216186	C	T	SNP	NEK10	ENST00000383771	human	ensembl	74_37	-1	known	missense	c.580	p.E194K	0.880	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK10	HGNC	ENSG00000163491	tier1	-	-	20	0	0.00	36	16	30.77
COL12A1	0	genome.wustl.edu	37	6	75838038	75838038	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	75838038	75838038	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.6314	p.G2105D	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	56	0	0.00	58	18	23.68
TICAM1	0	genome.wustl.edu	37	19	4816506	4816506	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	4816506	4816506	C	T	SNP	TICAM1	ENST00000248244	human	ensembl	74_37	-1	known	silent	c.1884	p.P628	0.000	pirsf_TICAM1	superfamily_TIR_dom,pirsf_TICAM1	-	no_errors	TICAM1	HGNC	ENSG00000127666	tier1	-	-	38	0	0.00	21	11	33.33
ZFPM2	0	genome.wustl.edu	37	8	106813689	106813689	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	106813689	106813689	C	T	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.1379	p.T460I	0.175	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	45	0	0.00	39	14	26.42
PRRC2B	0	genome.wustl.edu	37	9	134360348	134360348	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	134360348	134360348	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.5579	p.R1860H	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	45	0	0.00	34	16	32.00
CD99	0	genome.wustl.edu	37	X	2651511	2651511	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	2651511	2651511	G	A	SNP	CD99	ENST00000482405	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD99	HGNC	ENSG00000002586	tier1	-	-	99	0	0.00	58	37	38.14
LAMC1	0	genome.wustl.edu	37	1	182993178	182993178	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	182993178	182993178	C	T	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	silent	c.327	p.Y109	1.000	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862	tier1	-	-	79	0	0.00	59	6	9.23
ZNF385A	0	genome.wustl.edu	37	12	54763922	54763922	+	RNA	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	54763922	54763922	G	-	DEL	ZNF385A	ENST00000552382	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF385A	HGNC	ENSG00000161642	tier1			15	0	0.00	21	12	36.36
ARHGAP33	0	genome.wustl.edu	37	19	36276164	36276164	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	36276164	36276164	C	T	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.1795	p.R599W	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777	tier1	-	-	134	0	0.00	84	40	32.26
SLC4A5	0	genome.wustl.edu	37	2	74492351	74492351	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	74492351	74492351	G	A	SNP	SLC4A5	ENST00000357822	human	ensembl	74_37	-1	known	missense	c.442	p.R148C	0.999	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A5	HGNC	ENSG00000188687	tier1	-	-	39	0	0.00	35	9	20.45
CDC45	0	genome.wustl.edu	37	22	19481886	19481886	+	Nonsense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	19481886	19481886	C	T	SNP	CDC45	ENST00000437685	human	ensembl	74_37	+1	known	nonsense	c.523	p.R175*	0.882	pfam_CDC45	pfam_CDC45	-	no_errors	CDC45	HGNC	ENSG00000093009	tier1	-	-	43	0	0.00	52	9	14.75
IL9R	0	genome.wustl.edu	37	X	155239605	155239605	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	155239605	155239605	C	A	SNP	IL9R	ENST00000244174	human	ensembl	74_37	+1	known	missense	c.1097	p.P366H	0.003	NULL	superfamily_Fibronectin_type3	-	no_errors	IL9R	HGNC	ENSG00000124334	tier1	-	-	182	0	0.00	175	33	15.87
HDGFL1	0	genome.wustl.edu	37	6	22570532	22570532	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	22570532	22570532	C	T	SNP	HDGFL1	ENST00000230012	human	ensembl	74_37	+1	known	missense	c.728	p.P243L	0.004	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFL1	HGNC	ENSG00000112273	tier1	-	-	47	0	0.00	29	5	14.71
ZNF341	0	genome.wustl.edu	37	20	32378993	32378994	+	Frame_Shift_Ins	INS	-	-	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	32378993	32378994	-	C	INS	ZNF341	ENST00000375200	human	ensembl	74_37	+1	known	frame_shift_ins	c.2235_2236	p.Q747fs	0.964:0.979	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF341	HGNC	ENSG00000131061	tier1			31	0	0.00	22	8	26.67
RGMA	0	genome.wustl.edu	37	15	93588731	93588731	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	93588731	93588731	G	A	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	missense	c.850	p.R284C	1.000	pfam_RGM_C	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175	tier1	-	-	39	0	0.00	26	10	27.03
SPPL2C	0	genome.wustl.edu	37	17	43922898	43922898	+	Missense_Mutation	SNP	A	A	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	43922898	43922898	A	C	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.626	p.E209A	1.000	NULL	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294	tier1	-	-	28	0	0.00	18	7	28.00
ANXA1	0	genome.wustl.edu	37	9	75773648	75773648	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	75773648	75773648	C	T	SNP	ANXA1	ENST00000257497	human	ensembl	74_37	+1	known	missense	c.104	p.A35V	0.970	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinI	-	no_errors	ANXA1	HGNC	ENSG00000135046	tier1	-	-	22	0	0.00	29	22	43.14
TP53BP1	0	genome.wustl.edu	37	15	43708440	43708440	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	43708440	43708440	G	T	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	missense	c.4856	p.A1619E	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	tier1	-	-	46	0	0.00	46	4	8.00
KRT20	0	genome.wustl.edu	37	17	39041314	39041314	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	39041314	39041314	G	A	SNP	KRT20	ENST00000167588	human	ensembl	74_37	-1	known	missense	c.124	p.R42W	0.000	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT20	HGNC	ENSG00000171431	tier1	-	-	41	0	0.00	26	22	45.83
PBRM1	0	genome.wustl.edu	37	3	52678784	52678784	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	52678784	52678784	T	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.835	p.I279fs	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939	tier1			162	0	0.00	142	28	16.47
TUBA3D	0	genome.wustl.edu	37	2	132238232	132238232	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	132238232	132238232	C	T	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	silent	c.966	p.D322	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886	tier1	-	-	54	0	0.00	30	28	48.28
APOBR	0	genome.wustl.edu	37	16	28508991	28508991	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	28508991	28508991	C	G	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.2629	p.L877V	0.028	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	tier1	-	-	82	0	0.00	45	29	39.19
GNB2	0	genome.wustl.edu	37	7	100276034	100276034	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	100276034	100276034	G	A	SNP	GNB2	ENST00000303210	human	ensembl	74_37	+1	known	missense	c.713	p.G238D	1.000	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB2	HGNC	ENSG00000172354	tier1	-	-	32	0	0.00	22	12	35.29
PRDM7	0	genome.wustl.edu	37	16	90128855	90128855	+	Silent	SNP	A	A	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	90128855	90128855	A	T	SNP	PRDM7	ENST00000449207	human	ensembl	74_37	-1	known	silent	c.564	p.G188	0.001	pfam_SSXRD_motif	pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_SET_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM7	HGNC	ENSG00000126856	tier1	-	-	46	0	0.00	67	9	11.84
MYH9	0	genome.wustl.edu	37	22	36689835	36689835	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	36689835	36689835	G	A	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	silent	c.3912	p.S1304	0.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	58	0	0.00	41	12	22.64
FGF3	0	genome.wustl.edu	37	11	69625282	69625282	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	69625282	69625282	G	A	SNP	FGF3	ENST00000334134	human	ensembl	74_37	-1	known	missense	c.511	p.R171C	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF3	HGNC	ENSG00000186895	tier1	-	-	130	0	0.00	73	48	39.67
CCDC135	0	genome.wustl.edu	37	16	57761251	57761251	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	57761251	57761251	C	T	SNP	CCDC135	ENST00000360716	human	ensembl	74_37	+1	known	missense	c.2126	p.A709V	0.046	NULL	NULL	-	no_errors	CCDC135	HGNC	ENSG00000159625	tier1	rs147667972	-	58	0	0.00	29	23	44.23
FGF17	0	genome.wustl.edu	37	8	21905620	21905620	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	21905620	21905620	G	A	SNP	FGF17	ENST00000359441	human	ensembl	74_37	+1	known	missense	c.511	p.E171K	0.995	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF17	HGNC	ENSG00000158815	tier1	-	-	31	0	0.00	20	5	20.00
FAT1	0	genome.wustl.edu	37	4	187540247	187540247	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	187540247	187540247	T	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.7493	p.E2498V	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	26	0	0.00	27	14	34.15
SLC13A3	0	genome.wustl.edu	37	20	45212110	45212110	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	45212110	45212110	C	T	SNP	SLC13A3	ENST00000464518	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC13A3	HGNC	ENSG00000158296	tier1	-	-	15	0	0.00	6	5	45.45
C5	0	genome.wustl.edu	37	9	123794394	123794394	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	123794394	123794394	A	G	SNP	C5	ENST00000223642	human	ensembl	74_37	-1	known	missense	c.664	p.Y222H	1.000	NULL	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_Netrin_module_non-TIMP,pfam_A2M_N,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain,prints_Anaphylatoxn_comp_syst_dom	-	no_errors	C5	HGNC	ENSG00000106804	tier1	-	-	32	0	0.00	43	6	12.24
CHN2	0	genome.wustl.edu	37	7	29438038	29438038	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	29438038	29438038	G	A	SNP	CHN2	ENST00000539406	human	ensembl	74_37	+1	known	missense	c.451	p.V151M	0.855	pfam_SH2,smart_SH2,pfscan_SH2	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SH2,superfamily_Rho_GTPase_activation_prot,smart_SH2,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_DAG/PE-bd	-	no_errors	CHN2	HGNC	ENSG00000106069	tier1	-	-	16	0	0.00	19	13	40.62
SLC12A2	0	genome.wustl.edu	37	5	127520487	127520487	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	127520487	127520487	C	T	SNP	SLC12A2	ENST00000262461	human	ensembl	74_37	+1	known	missense	c.3442	p.R1148W	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt1,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A2	HGNC	ENSG00000064651	tier1	-	-	68	0	0.00	73	25	25.51
SPHK2	0	genome.wustl.edu	37	19	49132438	49132438	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	49132438	49132438	G	A	SNP	SPHK2	ENST00000443164	human	ensembl	74_37	+1	known	missense	c.1559	p.G520D	0.863	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176	tier1	-	-	78	0	0.00	71	7	8.97
SHANK2	0	genome.wustl.edu	37	11	70332268	70332268	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	70332268	70332268	G	A	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.4133	p.A1378V	0.492	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	tier1	-	-	45	0	0.00	18	18	50.00
SNX8	0	genome.wustl.edu	37	7	2296591	2296591	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	2296591	2296591	G	A	SNP	SNX8	ENST00000222990	human	ensembl	74_37	-1	known	missense	c.1202	p.T401M	0.995	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX8	HGNC	ENSG00000106266	tier1	-	-	62	0	0.00	51	31	37.80
MPHOSPH9	0	genome.wustl.edu	37	12	123706321	123706322	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	123706321	123706322	-	A	INS	MPHOSPH9	ENST00000392425	human	ensembl	74_37	-1	known	frame_shift_ins	c.14_13	p.S5fs	0.995:0.977	NULL	superfamily_Prefoldin	-	no_errors	MPHOSPH9	HGNC	ENSG00000051825	tier1			50	0	0.00	47	16	25.40
WDR13	0	genome.wustl.edu	37	X	48457972	48457972	+	RNA	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	48457972	48457972	C	A	SNP	WDR13	ENST00000495575	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	WDR13	HGNC	ENSG00000101940	tier1	-	-	20	0	0.00	22	4	15.38
OLFML3	0	genome.wustl.edu	37	1	114523089	114523089	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	114523089	114523089	T	G	SNP	OLFML3	ENST00000320334	human	ensembl	74_37	+1	known	missense	c.250	p.S84A	0.166	NULL	pfam_Olfac-like,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML3	HGNC	ENSG00000116774	tier1	-	-	41	0	0.00	21	14	40.00
TP53	0	genome.wustl.edu	37	17	7579414	7579414	+	Nonsense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	7579414	7579414	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.273	p.W91*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	53	0	0.00	41	13	24.07
FAM86B1	0	genome.wustl.edu	37	8	12042940	12042940	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	12042940	12042940	G	A	SNP	FAM86B1	ENST00000527300	human	ensembl	74_37	-1	known	missense	c.254	p.T85M	0.761	NULL	NULL	-	no_errors	FAM86B1	HGNC	ENSG00000186523	tier1	rs200121631	-	205	0	0.00	193	27	12.27
ATXN7L1	0	genome.wustl.edu	37	7	105254570	105254570	+	Silent	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	105254570	105254570	T	C	SNP	ATXN7L1	ENST00000419735	human	ensembl	74_37	-1	known	silent	c.2211	p.G737	0.994	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	tier1	-	-	20	0	0.00	15	5	25.00
TCOF1	0	genome.wustl.edu	37	5	149769450	149769450	+	Missense_Mutation	SNP	G	G	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	149769450	149769450	G	C	SNP	TCOF1	ENST00000451292	human	ensembl	74_37	+1	known	missense	c.3158	p.G1053A	0.093	NULL	pfam_TCS_treacle,smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_Treacle-like_TCS	-	no_errors	TCOF1	HGNC	ENSG00000070814	tier1	-	-	32	0	0.00	52	14	21.21
RNF220	0	genome.wustl.edu	37	1	45116990	45116993	+	RNA	DEL	CTCT	CTCT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CTCT	CTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	45116990	45116993	CTCT	-	DEL	RNF220	ENST00000474064	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.930:0.655:0.637:0.201	-	-	-	no_errors	RNF220	HGNC	ENSG00000187147	tier1			71	0	0.00	47	14	22.95
PRDM16	0	genome.wustl.edu	37	1	3329296	3329296	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	3329296	3329296	G	A	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	silent	c.2535	p.A845	0.039	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	11	0	0.00	10	4	28.57
SCN11A	0	genome.wustl.edu	37	3	38938441	38938441	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	38938441	38938441	G	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.2298	p.C766	0.942	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	rs202104116	-	26	0	0.00	27	21	43.75
AARS2	0	genome.wustl.edu	37	6	44271108	44271108	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	44271108	44271108	G	A	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.2060	p.A687V	0.495	superfamily_Thr/Ala-tRNA-synth_IIc_edit,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608	tier1	-	-	30	0	0.00	24	4	14.29
BMPER	0	genome.wustl.edu	37	7	34094854	34094854	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	34094854	34094854	G	A	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	missense	c.866	p.C289Y	1.000	smart_VWF_C	pfam_VWF_type-D,pfam_VWF_C,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_C,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,pfscan_VWF_C	-	no_errors	BMPER	HGNC	ENSG00000164619	tier1	-	-	57	0	0.00	38	22	36.67
PPP1R10	0	genome.wustl.edu	37	6	30570263	30570264	+	In_Frame_Ins	INS	-	-	GGA			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	30570263	30570264	-	GGA	INS	PPP1R10	ENST00000376511	human	ensembl	74_37	-1	known	in_frame_ins	c.2163_2162	p.722in_frame_insP	0.355:0.990	NULL	pfam_TFIIS_N,pfam_Znf_CCCH,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_Znf_CCCH	-	no_errors	PPP1R10	HGNC	ENSG00000204569	tier1			58	0	0.00	77	12	13.48
GALNT10	0	genome.wustl.edu	37	5	153760019	153760019	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	153760019	153760019	C	T	SNP	GALNT10	ENST00000297107	human	ensembl	74_37	+1	known	missense	c.766	p.R256W	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT10	HGNC	ENSG00000164574	tier1	-	-	38	0	0.00	64	10	13.51
PLEC	0	genome.wustl.edu	37	8	144997258	144997258	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	144997258	144997258	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.7250	p.A2417V	0.999	superfamily_Chorismate_mutase_type_II	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	17	0	0.00	16	4	20.00
CELSR1	0	genome.wustl.edu	37	22	46762287	46762287	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	46762287	46762287	C	T	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.8296	p.V2766I	0.020	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275	tier1	-	-	52	0	0.00	49	22	30.99
KRT85	0	genome.wustl.edu	37	12	52757866	52757866	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	52757866	52757866	G	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	missense	c.772	p.R258C	0.125	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	21	0	0.00	11	7	38.89
TENM2	0	genome.wustl.edu	37	5	167517646	167517646	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	167517646	167517646	G	A	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.1583	p.R528Q	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	62	0	0.00	66	20	23.26
NAT10	0	genome.wustl.edu	37	11	34156835	34156835	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	34156835	34156835	C	T	SNP	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	silent	c.2025	p.S675	0.864	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372	tier1	-	-	32	0	0.00	30	10	25.00
ZNF567	0	genome.wustl.edu	37	19	37211253	37211253	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	37211253	37211253	C	T	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	missense	c.1627	p.R543C	0.055	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042	tier1	rs201636823	-	30	0	0.00	22	21	48.84
SULF1	0	genome.wustl.edu	37	8	70539472	70539472	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	70539472	70539472	C	G	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1878	p.I626M	1.000	pfam_Extracellular_sulfatase_C,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	90	0	0.00	63	14	18.18
OR4S1	0	genome.wustl.edu	37	11	48328423	48328423	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	48328423	48328423	G	A	SNP	OR4S1	ENST00000319988	human	ensembl	74_37	+1	known	missense	c.649	p.V217I	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S1	HGNC	ENSG00000176555	tier1	-	-	38	0	0.00	28	22	44.00
DNAH9	0	genome.wustl.edu	37	17	11837275	11837276	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	11837275	11837276	CT	-	DEL	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	frame_shift_del	c.12376_12377	p.C4127fs	0.999:1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1			78	0	0.00	50	7	12.28
MIR4668	0	genome.wustl.edu	37	9	114694384	114694384	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	114694384	114694384	A	-	DEL	MIR4668	ENST00000582284	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR4668	HGNC	ENSG00000266315	tier1			20	0	0.00	28	5	15.15
ZFP36L1	0	genome.wustl.edu	37	14	69256388	69256388	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	69256388	69256388	G	-	DEL	ZFP36L1	ENST00000336440	human	ensembl	74_37	-1	known	frame_shift_del	c.879	p.S294fs	1.000	NULL	pfam_Tis11B_N,pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZFP36L1	HGNC	ENSG00000185650	tier1			45	0	0.00	19	9	32.14
TMEM260	0	genome.wustl.edu	37	14	57046751	57046751	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	57046751	57046751	T	A	SNP	TMEM260	ENST00000261556	human	ensembl	74_37	+1	known	missense	c.119	p.F40Y	0.919	NULL	pfam_DUF2723	-	no_errors	TMEM260	HGNC	ENSG00000070269	tier1	-	-	111	0	0.00	42	15	26.32
KRT222	0	genome.wustl.edu	37	17	38818272	38818272	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	38818272	38818272	T	-	DEL	KRT222	ENST00000394052	human	ensembl	74_37	-1	known	frame_shift_del	c.121	p.M41fs	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT222	HGNC	ENSG00000213424	tier1			51	0	0.00	46	9	16.36
COL14A1	0	genome.wustl.edu	37	8	121301939	121301939	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	121301939	121301939	G	A	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.4170	p.T1390	0.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	rs143025238	-	56	0	0.00	78	22	22.00
SMAD5-AS1	0	genome.wustl.edu	37	5	135469548	135469548	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	135469548	135469548	C	T	SNP	SMAD5-AS1	ENST00000297163	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	SMAD5-AS1	HGNC	ENSG00000164621	tier1	-	-	112	0	0.00	102	43	29.66
AIM1	0	genome.wustl.edu	37	6	106960257	106960257	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	106960257	106960257	G	-	DEL	AIM1	ENST00000369066	human	ensembl	74_37	+1	known	frame_shift_del	c.41	p.S16fs	1.000	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1	HGNC	ENSG00000112297	tier1			55	0	0.00	29	6	17.14
NT5C1B	0	genome.wustl.edu	37	2	18767589	18767589	+	Silent	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	18767589	18767589	T	C	SNP	NT5C1B	ENST00000359846	human	ensembl	74_37	-1	known	silent	c.369	p.R123	0.119	NULL	pfam_5-nucleotidase	-	no_errors	NT5C1B	HGNC	ENSG00000185013	tier1	-	-	54	0	0.00	65	19	22.62
SYK	0	genome.wustl.edu	37	9	93650108	93650108	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	93650108	93650108	C	T	SNP	SYK	ENST00000375746	human	ensembl	74_37	+1	known	silent	c.1659	p.S553	0.974	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	SYK	HGNC	ENSG00000165025	tier1	rs141667926	-	47	0	0.00	32	26	44.83
ANKRD60	0	genome.wustl.edu	37	20	56803402	56803402	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	56803402	56803402	G	A	SNP	ANKRD60	ENST00000457363	human	ensembl	74_37	-1	known	missense	c.308	p.T103M	0.994	pfscan_Ubiquitin_supergroup	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin_supergroup	-	no_errors	ANKRD60	HGNC	ENSG00000124227	tier1	-	-	125	1	0.79	59	8	11.59
SPECC1	0	genome.wustl.edu	37	17	20108263	20108263	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	20108263	20108263	A	-	DEL	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	frame_shift_del	c.901	p.N303fs	0.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487	tier1			22	0	0.00	28	6	17.65
SMARCA1	0	genome.wustl.edu	37	X	128582345	128582346	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	128582345	128582346	CT	-	DEL	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	frame_shift_del	c.3106_3105	p.R1035fs	1.000:1.000	superfamily_Homeodomain-like	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038	tier1			42	0	0.00	64	11	14.67
SCAF4	0	genome.wustl.edu	37	21	33073423	33073423	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	21	33073423	33073423	T	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.662	p.N221S	1.000	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	tier1	-	-	94	0	0.00	73	31	29.81
QPRT	0	genome.wustl.edu	37	16	29690479	29690479	+	RNA	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	29690479	29690479	T	C	SNP	QPRT	ENST00000219771	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	QPRT	HGNC	ENSG00000103485	tier1	-	-	87	0	0.00	67	12	15.19
CTNNA2	0	genome.wustl.edu	37	2	80540733	80540733	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	80540733	80540733	A	-	DEL	CTNNA2	ENST00000343114	human	ensembl	74_37	+1	putative	frame_shift_del	c.47	p.N18fs	0.000	NULL	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1			92	0	0.00	76	18	19.15
POU6F1	0	genome.wustl.edu	37	12	51585487	51585487	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	51585487	51585487	G	A	SNP	POU6F1	ENST00000333640	human	ensembl	74_37	-1	known	missense	c.452	p.A151V	1.000	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F1	HGNC	ENSG00000184271	tier1	-	-	75	0	0.00	76	20	20.83
KCNQ3	0	genome.wustl.edu	37	8	133150233	133150233	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	133150233	133150233	T	-	DEL	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	frame_shift_del	c.1599	p.K533fs	0.715	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156	tier1			52	0	0.00	45	8	15.09
LIMK1	0	genome.wustl.edu	37	7	73511493	73511493	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	73511493	73511493	G	A	SNP	LIMK1	ENST00000336180	human	ensembl	74_37	+1	known	silent	c.375	p.T125	0.022	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	tier1	-	-	29	0	0.00	24	14	36.84
SCAPER	0	genome.wustl.edu	37	15	76958035	76958036	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	76958035	76958036	-	T	INS	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	frame_shift_ins	c.2604_2603	p.N868fs	0.445:0.968	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386	tier1			55	0	0.00	46	14	23.33
SMR3A	0	genome.wustl.edu	37	4	71232706	71232706	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	71232706	71232706	C	T	SNP	SMR3A	ENST00000226460	human	ensembl	74_37	+1	known	missense	c.400	p.P134S	0.010	NULL	NULL	-	no_errors	SMR3A	HGNC	ENSG00000109208	tier1	-	-	23	0	0.00	32	12	27.27
PXT1	0	genome.wustl.edu	37	6	36359632	36359632	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	36359632	36359632	C	G	SNP	PXT1	ENST00000454782	human	ensembl	74_37	-1	putative	missense	c.320	p.R107T	0.062	NULL	NULL	-	no_errors	PXT1	HGNC	ENSG00000179165	tier1	-	-	112	0	0.00	90	51	36.17
ZNF131	0	genome.wustl.edu	37	5	43161952	43161952	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	43161952	43161952	A	-	DEL	ZNF131	ENST00000399534	human	ensembl	74_37	+1	known	frame_shift_del	c.973	p.I327fs	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZNF131	HGNC	ENSG00000172262	tier1			24	0	0.00	27	5	15.62
ATP7B	0	genome.wustl.edu	37	13	52511712	52511712	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	52511712	52511712	C	A	SNP	ATP7B	ENST00000242839	human	ensembl	74_37	-1	known	missense	c.3803	p.G1268V	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7B	HGNC	ENSG00000123191	tier1	-	-	61	0	0.00	27	7	20.59
MST1R	0	genome.wustl.edu	37	3	49928639	49928639	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	49928639	49928639	C	T	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.3635	p.R1212Q	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078	tier1	-	-	11	0	0.00	13	6	31.58
RAB11FIP2	0	genome.wustl.edu	37	10	119765266	119765267	+	RNA	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	119765266	119765267	-	T	INS	RAB11FIP2	ENST00000476207	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560	tier1			11	0	0.00	20	3	13.04
NOC4L	0	genome.wustl.edu	37	12	132636680	132636680	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	132636680	132636680	A	G	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	missense	c.1369	p.N457D	1.000	NULL	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967	tier1	-	-	43	0	0.00	46	8	14.81
CAPN15	0	genome.wustl.edu	37	16	597434	597434	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	597434	597434	C	T	SNP	CAPN15	ENST00000219611	human	ensembl	74_37	+1	known	missense	c.596	p.A199V	0.006	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Znf_RanBP2,smart_Znf_RanBP2,smart_Peptidase_C2_calpain_cat,pfscan_Znf_RanBP2,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN15	HGNC	ENSG00000103326	tier1	-	-	9	0	0.00	7	5	41.67
STRADB	0	genome.wustl.edu	37	2	202339398	202339398	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	202339398	202339398	G	A	SNP	STRADB	ENST00000194530	human	ensembl	74_37	+1	known	missense	c.344	p.R115Q	0.996	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADB	HGNC	ENSG00000082146	tier1	-	-	89	0	0.00	75	7	8.54
MAP1LC3A	0	genome.wustl.edu	37	20	33147980	33147987	+	RNA	DEL	CTGCCTGT	CTGCCTGT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CTGCCTGT	CTGCCTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	33147980	33147987	CTGCCTGT	-	DEL	MAP1LC3A	ENST00000476428	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors	MAP1LC3A	HGNC	ENSG00000101460	tier1			NA	NA	NA	NA	NA	NA
LACTB	0	genome.wustl.edu	37	15	63419132	63419133	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	63419132	63419133	AA	-	DEL	LACTB	ENST00000261893	human	ensembl	74_37	+1	known	frame_shift_del	c.499_500	p.L169fs	1.000:1.000	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	pfam_Beta-lactam-related,superfamily_Beta-lactam/transpept-like	-	no_errors	LACTB	HGNC	ENSG00000103642	tier1			88	0	0.00	56	20	26.32
ENTPD1-AS1	0	genome.wustl.edu	37	10	97515948	97515949	+	RNA	INS	-	-	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	97515948	97515949	-	G	INS	ENTPD1-AS1	ENST00000416301	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.969:0.906	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688	tier1			133	0	0.00	115	17	12.88
PIK3R3	0	genome.wustl.edu	37	1	46509105	46509106	+	RNA	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	46509105	46509106	-	A	INS	PIK3R3	ENST00000488808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.168:0.001	-	-	-	no_errors	PIK3R3	HGNC	ENSG00000117461	tier1			24	0	0.00	29	8	21.62
OR56B4	0	genome.wustl.edu	37	11	6129091	6129091	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	6129091	6129091	A	G	SNP	OR56B4	ENST00000316529	human	ensembl	74_37	+1	known	missense	c.83	p.E28G	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR56B4	HGNC	ENSG00000180919	tier1	-	-	69	0	0.00	59	7	10.61
MIR4329	0	genome.wustl.edu	37	X	112023991	112023991	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	112023991	112023991	A	-	DEL	MIR4329	ENST00000582643	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR4329	HGNC	ENSG00000263351	tier1			42	0	0.00	52	17	24.64
SYN3	0	genome.wustl.edu	37	22	32909719	32909719	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	32909719	32909719	C	T	SNP	SYN3	ENST00000332840	human	ensembl	74_37	-1	known	missense	c.1703	p.R568H	1.000	NULL	pfam_Synapsin_ATP-bd_dom,pfam_Synapsin_pre-ATP-grasp_dom,pfam_Synapsin_P_site,pfam_ATP-grasp_RimK-type,superfamily_PreATP-grasp_dom,prints_Synapsin	-	no_errors	SYN3	HGNC	ENSG00000185666	tier1	-	-	29	0	0.00	17	13	43.33
ENSG00000221664	0	genome.wustl.edu	37	1	77857157	77857158	+	RNA	DEL	TG	TG	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	77857157	77857158	TG	-	DEL	ENSG00000221664	ENST00000408737	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.995:0.994	-	-	-	no_errors	AC095030.1	Clone_based_ensembl_gene	ENSG00000221664	tier1			36	0	0.00	44	7	13.73
LIPJ	0	genome.wustl.edu	37	10	90365424	90365424	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	90365424	90365424	G	T	SNP	LIPJ	ENST00000371939	human	ensembl	74_37	+1	known	missense	c.830	p.W277L	0.998	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPJ	HGNC	ENSG00000204022	tier1	-	-	39	0	0.00	21	17	44.74
PRSS41	0	genome.wustl.edu	37	16	2855011	2855011	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	2855011	2855011	C	T	SNP	PRSS41	ENST00000399677	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.229	-	-	-	no_errors	PRSS41	HGNC	ENSG00000215148	tier1	-	-	68	0	0.00	56	21	27.27
KNDC1	0	genome.wustl.edu	37	10	135015334	135015334	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	135015334	135015334	G	A	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.3325	p.V1109I	0.989	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798	tier1	-	-	24	0	0.00	26	7	21.21
ZC3H13	0	genome.wustl.edu	37	13	46543874	46543874	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	46543874	46543874	C	A	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	missense	c.2805	p.Q935H	0.896	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200	tier1	-	-	32	0	0.00	30	7	18.92
TMEM51-AS1	0	genome.wustl.edu	37	1	15478798	15478798	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	15478798	15478798	C	T	SNP	TMEM51-AS1	ENST00000310916	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TMEM51-AS1	HGNC	ENSG00000175147	tier1	-	-	84	0	0.00	44	33	42.86
COPZ2	0	genome.wustl.edu	37	17	46103622	46103623	+	RNA	DEL	CT	CT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	46103622	46103623	CT	-	DEL	COPZ2	ENST00000582553	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.000	-	-	-	no_errors	COPZ2	HGNC	ENSG00000005243	tier1			15	0	0.00	14	5	26.32
PTBP1	0	genome.wustl.edu	37	19	803599	803600	+	Frame_Shift_Ins	INS	-	-	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	803599	803600	-	G	INS	PTBP1	ENST00000356948	human	ensembl	74_37	+1	known	frame_shift_ins	c.78_79	p.P27fs	1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	PTBP1	HGNC	ENSG00000011304	tier1			53	0	0.00	14	7	33.33
NYX	0	genome.wustl.edu	37	X	41331557	41331557	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	41331557	41331557	G	A	SNP	NYX	ENST00000486842	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NYX	HGNC	ENSG00000188937	tier1	-	-	11	0	0.00	19	7	25.93
KBTBD6	0	genome.wustl.edu	37	13	41704810	41704811	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	41704810	41704811	-	A	INS	KBTBD6	ENST00000379485	human	ensembl	74_37	-1	known	frame_shift_ins	c.1838_1837	p.C613fs	1.000:0.865	NULL	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KBTBD6	HGNC	ENSG00000165572	tier1			77	0	0.00	42	12	22.22
RSPH4A	0	genome.wustl.edu	37	6	116938393	116938393	+	Missense_Mutation	SNP	G	G	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	116938393	116938393	G	C	SNP	RSPH4A	ENST00000229554	human	ensembl	74_37	+1	known	missense	c.607	p.A203P	0.136	NULL	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834	tier1	-	-	44	0	0.00	36	4	10.00
HSD11B1	0	genome.wustl.edu	37	1	209880054	209880054	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	209880054	209880054	G	A	SNP	HSD11B1	ENST00000261465	human	ensembl	74_37	+1	known	missense	c.220	p.V74M	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	HSD11B1	HGNC	ENSG00000117594	tier1	-	-	24	0	0.00	47	7	12.96
C10orf54	0	genome.wustl.edu	37	10	73512760	73512760	+	Splice_Site	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	73512760	73512760	C	A	SNP	C10orf54	ENST00000394957	human	ensembl	74_37	-1	known	splice_site	c.677-1	e5-1	1.000	-	-	-	no_errors	C10orf54	HGNC	ENSG00000107738	tier1	-	-	80	0	0.00	61	10	14.08
ABCA12	0	genome.wustl.edu	37	2	215831612	215831612	+	Silent	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	215831612	215831612	A	G	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	silent	c.5844	p.L1948	0.982	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	53	0	0.00	72	15	17.24
RHO	0	genome.wustl.edu	37	3	129249825	129249825	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	129249825	129249825	C	T	SNP	RHO	ENST00000296271	human	ensembl	74_37	+1	known	silent	c.468	p.G156	0.791	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Rhodopsin_N,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	RHO	HGNC	ENSG00000163914	tier1	-	-	34	0	0.00	24	11	31.43
THBS3	0	genome.wustl.edu	37	1	155172080	155172080	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	155172080	155172080	C	T	SNP	THBS3	ENST00000368378	human	ensembl	74_37	-1	known	missense	c.1070	p.G357D	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231	tier1	rs200881809	-	65	0	0.00	31	21	40.38
GPR123	0	genome.wustl.edu	37	10	134942697	134942697	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	134942697	134942697	C	-	DEL	GPR123	ENST00000607359	human	ensembl	74_37	+1	putative	frame_shift_del	c.3522	p.S1177fs	1.000	NULL	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	-	no_errors	GPR123	HGNC	ENSG00000197177	tier1			17	0	0.00	15	2	11.76
NR1D1	0	genome.wustl.edu	37	17	38252833	38252833	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	38252833	38252833	A	-	DEL	NR1D1	ENST00000246672	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.F156fs	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368	tier1			28	0	0.00	28	3	9.68
KSR1	0	genome.wustl.edu	37	17	25932715	25932715	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	25932715	25932715	C	A	SNP	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	missense	c.1936	p.H646N	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068	tier1	-	-	43	0	0.00	27	11	28.95
VWDE	0	genome.wustl.edu	37	7	12375778	12375778	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	12375778	12375778	C	T	SNP	VWDE	ENST00000275358	human	ensembl	74_37	-1	novel	missense	c.4643	p.R1548Q	0.984	pfam_EGF_extracell,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF_extracell,pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530	tier1	-	-	161	0	0.00	121	59	32.78
AEBP1	0	genome.wustl.edu	37	7	44152925	44152925	+	Silent	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	44152925	44152925	T	C	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	silent	c.2784	p.S928	0.856	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	20	0	0.00	9	12	57.14
BEND5	0	genome.wustl.edu	37	1	49201967	49201967	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	49201967	49201967	T	-	DEL	BEND5	ENST00000371833	human	ensembl	74_37	-1	known	frame_shift_del	c.1052	p.K351fs	1.000	pfam_BEN_domain	pfam_BEN_domain	-	no_errors	BEND5	HGNC	ENSG00000162373	tier1			27	0	0.00	43	17	28.33
PCDHGA2	0	genome.wustl.edu	37	5	140720140	140720140	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	140720140	140720140	G	A	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	silent	c.1602	p.A534	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853	tier1	rs146024512	-	60	0	0.00	43	5	10.42
PCLO	0	genome.wustl.edu	37	7	82581542	82581542	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	82581542	82581542	G	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.8727	p.V2909	0.808	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	37	0	0.00	24	18	42.86
DROSHA	0	genome.wustl.edu	37	5	31529150	31529150	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	31529150	31529150	G	A	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	missense	c.17	p.T6I	0.005	NULL	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360	tier1	-	-	49	0	0.00	41	7	14.58
WASF3	0	genome.wustl.edu	37	13	27250749	27250749	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	27250749	27250749	C	T	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	missense	c.604	p.R202C	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	42	0	0.00	31	9	22.50
PCDHGB2	0	genome.wustl.edu	37	5	140739910	140739910	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	140739910	140739910	G	A	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	missense	c.208	p.A70T	0.050	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910	tier1	-	-	49	0	0.00	46	7	13.21
ZNF526	0	genome.wustl.edu	37	19	42730292	42730292	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	42730292	42730292	C	T	SNP	ZNF526	ENST00000301215	human	ensembl	74_37	+1	known	silent	c.1737	p.G579	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF526	HGNC	ENSG00000167625	tier1	-	-	63	0	0.00	54	5	8.47
PDZD2	0	genome.wustl.edu	37	5	32088059	32088059	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	32088059	32088059	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.4505	p.S1502L	0.992	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	110	0	0.00	85	19	18.27
ARHGEF28	0	genome.wustl.edu	37	5	73188016	73188016	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	73188016	73188016	G	A	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	missense	c.3527	p.R1176H	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944	tier1	-	-	69	0	0.00	87	15	14.71
SLC41A1	0	genome.wustl.edu	37	1	205779322	205779322	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	205779322	205779322	C	T	SNP	SLC41A1	ENST00000367137	human	ensembl	74_37	-1	known	missense	c.248	p.R83H	0.001	NULL	pfam_SLC41_membr_dom	-	no_errors	SLC41A1	HGNC	ENSG00000133065	tier1	-	-	51	0	0.00	47	15	24.19
PITPNM2	0	genome.wustl.edu	37	12	123475112	123475112	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	123475112	123475112	G	A	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.2549	p.T850M	1.000	pfam_DDHD,pfscan_DDHD	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975	tier1	-	-	32	0	0.00	30	9	23.08
ROBO3	0	genome.wustl.edu	37	11	124750448	124750453	+	In_Frame_Del	DEL	CGGAGT	CGGAGT	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	CGGAGT	CGGAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	124750448	124750453	CGGAGT	-	DEL	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	in_frame_del	c.4093_4098	p.RS1367in_frame_del	1.000:1.000:0.988:0.987:1.000:0.999	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134	tier1			NA	NA	NA	NA	NA	NA
COMP	0	genome.wustl.edu	37	19	18895803	18895803	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	18895803	18895803	C	T	SNP	COMP	ENST00000222271	human	ensembl	74_37	-1	known	missense	c.1817	p.S606N	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd_dom,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	tier1	-	-	31	0	0.00	24	12	33.33
GLCE	0	genome.wustl.edu	37	15	69561452	69561452	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	69561452	69561452	C	T	SNP	GLCE	ENST00000261858	human	ensembl	74_37	+1	known	missense	c.1723	p.R575C	1.000	pfam_C5-epim	pfam_C5-epim	-	no_errors	GLCE	HGNC	ENSG00000138604	tier1	-	-	34	0	0.00	43	5	10.42
HMHA1	0	genome.wustl.edu	37	19	1080305	1080305	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	1080305	1080305	G	A	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.1755	p.A585	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	tier1	-	-	44	0	0.00	23	9	28.12
ENSG00000188474	0	genome.wustl.edu	37	19	12223906	12223906	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	12223906	12223906	G	A	SNP	ENSG00000188474	ENST00000339302	human	ensembl	74_37	+1	known	missense	c.1544	p.S515N	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF788	Uniprot_gn	ENSG00000188474	tier1	-	-	86	0	0.00	62	12	16.22
LRP1B	0	genome.wustl.edu	37	2	141762962	141762962	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	141762962	141762962	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.2445	p.G815	0.993	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	32	0	0.00	73	12	13.95
PCDH18	0	genome.wustl.edu	37	4	138452382	138452382	+	Silent	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	138452382	138452382	A	G	SNP	PCDH18	ENST00000344876	human	ensembl	74_37	-1	known	silent	c.861	p.S287	0.954	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184	tier1	-	-	36	0	0.00	60	6	9.09
PROX1	0	genome.wustl.edu	37	1	214178556	214178556	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	214178556	214178556	T	-	DEL	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	frame_shift_del	c.1774	p.Y594fs	1.000	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707	tier1			80	0	0.00	76	41	35.04
KIAA0556	0	genome.wustl.edu	37	16	27732932	27732933	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	27732932	27732933	-	T	INS	KIAA0556	ENST00000261588	human	ensembl	74_37	+1	known	frame_shift_ins	c.1659_1660	p.V555fs	0.910:0.729	NULL	superfamily_Thaumatin	-	no_errors	KIAA0556	HGNC	ENSG00000047578	tier1			60	0	0.00	57	27	32.14
ENTPD1-AS1	0	genome.wustl.edu	37	10	97778823	97778824	+	RNA	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	97778823	97778824	-	A	INS	ENTPD1-AS1	ENST00000458228	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.508:0.420	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688	tier1			39	0	0.00	36	7	16.28
R3HDM1	0	genome.wustl.edu	37	2	136396582	136396582	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	136396582	136396582	G	A	SNP	R3HDM1	ENST00000264160	human	ensembl	74_37	+1	known	missense	c.1109	p.R370Q	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM1	HGNC	ENSG00000048991	tier1	-	-	29	0	0.00	27	8	22.86
HYDIN	0	genome.wustl.edu	37	16	70866948	70866949	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	70866948	70866949	-	T	INS	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	frame_shift_ins	c.13702_13701	p.F4567fs	0.004:0.002	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1			58	0	0.00	73	31	29.81
USP34	0	genome.wustl.edu	37	2	61505330	61505330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	61505330	61505330	T	-	DEL	USP34	ENST00000398571	human	ensembl	74_37	-1	known	frame_shift_del	c.5403	p.K1801fs	0.996	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1			49	0	0.00	49	10	16.95
RPAP1	0	genome.wustl.edu	37	15	41809883	41809883	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	41809883	41809883	G	A	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	missense	c.4039	p.R1347W	1.000	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932	tier1	-	-	39	0	0.00	25	13	34.21
ENSG00000232675	0	genome.wustl.edu	37	20	19673862	19673863	+	RNA	INS	-	-	TT			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	19673862	19673863	-	TT	INS	ENSG00000232675	ENST00000435992	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP4-718D20.3	Clone_based_vega_gene	ENSG00000232675	tier1			9	0	0.00	24	3	11.11
LINC00304	0	genome.wustl.edu	37	16	89226823	89226823	+	RNA	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	89226823	89226823	A	G	SNP	LINC00304	ENST00000321214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.389	-	-	-	no_errors	LINC00304	HGNC	ENSG00000180422	tier1	-	-	49	0	0.00	46	8	14.81
ZFYVE9	0	genome.wustl.edu	37	1	52704475	52704475	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	52704475	52704475	C	T	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	silent	c.1386	p.F462	1.000	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077	tier1	-	-	75	0	0.00	61	10	14.08
ATP8A1	0	genome.wustl.edu	37	4	42627651	42627652	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	42627651	42627652	-	A	INS	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	frame_shift_ins	c.244_243	p.L81fs	1.000:1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1			114	0	0.00	111	14	11.20
GJB1	0	genome.wustl.edu	37	X	70444048	70444048	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	70444048	70444048	G	A	SNP	GJB1	ENST00000361726	human	ensembl	74_37	+1	known	missense	c.491	p.R164Q	1.000	pfam_Connexin_CCC	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin32	-	no_errors	GJB1	HGNC	ENSG00000169562	tier1	-	-	20	0	0.00	7	12	63.16
TMEM108	0	genome.wustl.edu	37	3	133099024	133099024	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	133099024	133099024	C	-	DEL	TMEM108	ENST00000321871	human	ensembl	74_37	+1	known	frame_shift_del	c.469	p.R159fs	0.000	NULL	NULL	-	no_errors	TMEM108	HGNC	ENSG00000144868	tier1			32	0	0.00	17	3	15.00
SPHKAP	0	genome.wustl.edu	37	2	228881380	228881380	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	228881380	228881380	C	A	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4190	p.S1397I	0.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	58	0	0.00	60	6	9.09
MYO1C	0	genome.wustl.edu	37	17	1370618	1370618	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	1370618	1370618	C	G	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	missense	c.3083	p.G1028A	0.997	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879	tier1	-	-	49	0	0.00	41	27	39.71
CPT1B	0	genome.wustl.edu	37	22	51011375	51011375	+	Silent	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	22	51011375	51011375	G	T	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	silent	c.1281	p.S427	0.009	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	tier1	-	-	36	0	0.00	29	11	27.50
TFAP2B	0	genome.wustl.edu	37	6	50791450	50791450	+	Silent	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	50791450	50791450	C	A	SNP	TFAP2B	ENST00000263046	human	ensembl	74_37	+1	known	silent	c.439	p.R147	0.952	NULL	pfam_TF_AP2_C,prints_TF_AP2_beta,prints_TF_AP2_C	-	no_errors	TFAP2B	HGNC	ENSG00000008196	tier1	-	-	16	0	0.00	10	4	28.57
FPGT	0	genome.wustl.edu	37	1	74670596	74670597	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	74670596	74670597	-	A	INS	FPGT	ENST00000370898	human	ensembl	74_37	+1	known	frame_shift_ins	c.904_905	p.I304fs	0.995:0.991	pfam_Fucokinase,pirsf_Fucose-1-phosphate_GuaTrfase	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	-	no_errors	FPGT	HGNC	ENSG00000254685	tier1			59	0	0.00	62	9	12.68
TMEM41B	0	genome.wustl.edu	37	11	9308018	9308018	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	9308018	9308018	A	-	DEL	TMEM41B	ENST00000299596	human	ensembl	74_37	-1	known	frame_shift_del	c.690	p.F230fs	1.000	pfam_SNARE_assoc	pfam_SNARE_assoc	-	no_errors	TMEM41B	HGNC	ENSG00000166471	tier1			92	0	0.00	89	10	10.10
PARP1	0	genome.wustl.edu	37	1	226549886	226549886	+	RNA	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	226549886	226549886	T	-	DEL	PARP1	ENST00000491816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	PARP1	HGNC	ENSG00000143799	tier1			26	0	0.00	28	5	15.15
DOC2A	0	genome.wustl.edu	37	16	30018553	30018553	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	30018553	30018553	G	A	SNP	DOC2A	ENST00000350119	human	ensembl	74_37	-1	known	missense	c.595	p.R199C	1.000	superfamily_C2_dom,smart_C2_dom,pirsf_Doc2	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	DOC2A	HGNC	ENSG00000149927	tier1	-	-	34	0	0.00	48	8	14.29
NF1	0	genome.wustl.edu	37	17	29552144	29552144	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	29552144	29552144	T	-	DEL	NF1	ENST00000358273	human	ensembl	74_37	+1	known	frame_shift_del	c.1877	p.Y628fs	0.976	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	tier1			33	0	0.00	26	7	21.21
ENSG00000204038	0	genome.wustl.edu	37	10	82012546	82012546	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	82012546	82012546	G	A	SNP	ENSG00000204038	ENST00000356374	human	ensembl	74_37	+1	known	missense	c.64	p.G22R	0.014	NULL	NULL	-	no_errors	AL359195.1	Clone_based_ensembl_gene	ENSG00000204038	tier1	-	-	19	0	0.00	14	6	28.57
SLC7A7	0	genome.wustl.edu	37	14	23242839	23242839	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	23242839	23242839	G	A	SNP	SLC7A7	ENST00000285850	human	ensembl	74_37	-1	known	missense	c.1516	p.R506W	0.743	NULL	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A7	HGNC	ENSG00000155465	tier1	rs138506427	-	34	0	0.00	14	8	36.36
LOC101927343	0	genome.wustl.edu	37	8	104258873	104258873	+	RNA	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	104258873	104258873	G	-	DEL	LOC101927343	ENST00000499522	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-318M2.2	Clone_based_vega_gene	ENSG00000247081	tier1			25	0	0.00	16	2	11.11
ENSG00000252176	0	genome.wustl.edu	37	8	39418521	39418524	+	RNA	DEL	ACAC	ACAC	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	ACAC	ACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	39418521	39418524	ACAC	-	DEL	ENSG00000252176	ENST00000516367	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	AC123767.1	Clone_based_ensembl_gene	ENSG00000252176	tier1			16	0	0.00	10	4	28.57
ENSG00000271730	0	genome.wustl.edu	37	6	109319968	109319968	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	109319968	109319968	A	-	DEL	ENSG00000271730	ENST00000605885	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-787I22.3	Clone_based_vega_gene	ENSG00000271730	tier1			17	0	0.00	21	3	12.50
CAMSAP1	0	genome.wustl.edu	37	9	138710956	138710956	+	Silent	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	138710956	138710956	G	T	SNP	CAMSAP1	ENST00000409386	human	ensembl	74_37	-1	known	silent	c.3892	p.R1298	1.000	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP1	HGNC	ENSG00000130559	tier1	-	-	29	0	0.00	18	3	14.29
EDA2R	0	genome.wustl.edu	37	X	65819393	65819393	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	65819393	65819393	C	-	DEL	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	frame_shift_del	c.890	p.G297fs	0.000	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080	tier1			8	0	0.00	31	10	24.39
SPTBN1	0	genome.wustl.edu	37	2	54855380	54855380	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	54855380	54855380	C	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	silent	c.1791	p.D597	0.846	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306	tier1	-	-	41	0	0.00	34	17	33.33
STXBP1	0	genome.wustl.edu	37	9	130439024	130439024	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	9	130439024	130439024	G	A	SNP	STXBP1	ENST00000373299	human	ensembl	74_37	+1	known	missense	c.1351	p.V451I	0.996	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP1	HGNC	ENSG00000136854	tier1	rs150259704	GMAF=0.0005	10	0	0.00	11	4	26.67
PPP1R9A	0	genome.wustl.edu	37	7	94540337	94540337	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	94540337	94540337	G	T	SNP	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	missense	c.912	p.E304D	0.225	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528	tier1	-	-	59	0	0.00	43	4	8.51
CNDP2	0	genome.wustl.edu	37	18	72187269	72187269	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	18	72187269	72187269	C	T	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	missense	c.1394	p.A465V	0.998	pfam_Peptidase_M20,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313	tier1	-	-	46	0	0.00	40	11	21.57
MTFR1	0	genome.wustl.edu	37	8	66594683	66594683	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	66594683	66594683	T	G	SNP	MTFR1	ENST00000262146	human	ensembl	74_37	+1	known	missense	c.162	p.F54L	1.000	pfam_Mtfr1	pfam_Mtfr1	-	no_errors	MTFR1	HGNC	ENSG00000066855	tier1	-	-	141	0	0.00	110	40	26.67
MSL2	0	genome.wustl.edu	37	3	135870189	135870189	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	135870189	135870189	C	T	SNP	MSL2	ENST00000309993	human	ensembl	74_37	-1	known	missense	c.1534	p.A512T	1.000	NULL	pfscan_Znf_RING	-	no_errors	MSL2	HGNC	ENSG00000174579	tier1	-	-	31	0	0.00	16	5	23.81
PROM2	0	genome.wustl.edu	37	2	95941702	95941702	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	95941702	95941702	G	A	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	missense	c.319	p.V107M	0.997	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066	tier1	rs142809353	-	9	0	0.00	7	9	56.25
PPP1R3C	0	genome.wustl.edu	37	10	93390509	93390509	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	93390509	93390509	G	A	SNP	PPP1R3C	ENST00000238994	human	ensembl	74_37	-1	known	silent	c.129	p.Y43	0.032	pirsf_Pase-1_Glycogen_target-su_met	pfam_CBM_21,pirsf_Pase-1_Glycogen_target-su_met,pfscan_CBM_21	-	no_errors	PPP1R3C	HGNC	ENSG00000119938	tier1	rs148420815	-	49	0	0.00	38	6	13.64
SULT6B1	0	genome.wustl.edu	37	2	37414553	37414553	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	37414553	37414553	T	-	DEL	SULT6B1	ENST00000535679	human	ensembl	74_37	-1	known	frame_shift_del	c.257	p.K86fs	0.944	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT6B1	HGNC	ENSG00000138068	tier1			175	0	0.00	108	60	35.71
RALGAPA2	0	genome.wustl.edu	37	20	20563753	20563753	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	20563753	20563753	G	A	SNP	RALGAPA2	ENST00000202677	human	ensembl	74_37	-1	known	missense	c.2648	p.A883V	0.998	NULL	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA2	HGNC	ENSG00000188559	tier1	-	-	49	0	0.00	33	26	44.07
MAST2	0	genome.wustl.edu	37	1	46472045	46472045	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	46472045	46472045	C	T	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.880	p.R294W	0.999	pfam_MA_Ser/Thr_Kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015	tier1	-	-	25	0	0.00	12	8	40.00
RREB1	0	genome.wustl.edu	37	6	7230854	7230854	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	7230854	7230854	C	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.2522	p.A841V	0.737	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	tier1	-	-	41	0	0.00	19	14	42.42
PHC3	0	genome.wustl.edu	37	3	169863250	169863250	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	169863250	169863250	C	T	SNP	PHC3	ENST00000495893	human	ensembl	74_37	-1	known	silent	c.633	p.S211	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC3	HGNC	ENSG00000173889	tier1	-	-	54	0	0.00	41	12	22.64
UBA6	0	genome.wustl.edu	37	4	68536256	68536256	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	68536256	68536256	C	T	SNP	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	missense	c.601	p.D201N	1.000	superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178	tier1	-	-	77	0	0.00	60	26	30.23
ITSN2	0	genome.wustl.edu	37	2	24484029	24484029	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	24484029	24484029	T	-	DEL	ITSN2	ENST00000355123	human	ensembl	74_37	-1	known	frame_shift_del	c.2628	p.K876fs	0.997	superfamily_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN2	HGNC	ENSG00000198399	tier1			53	0	0.00	49	24	32.88
PCDHGC5	0	genome.wustl.edu	37	5	140869033	140869033	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	140869033	140869033	T	C	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	missense	c.226	p.S76P	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764	tier1	-	-	44	0	0.00	38	21	35.59
KIF17	0	genome.wustl.edu	37	1	21014288	21014288	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	21014288	21014288	C	T	SNP	KIF17	ENST00000247986	human	ensembl	74_37	-1	known	missense	c.1531	p.D511N	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF17	HGNC	ENSG00000117245	tier1	-	-	17	0	0.00	23	9	28.12
MROH8	0	genome.wustl.edu	37	20	35807790	35807791	+	Frame_Shift_Ins	INS	-	-	CTTATAGACAGGGCCCCGCGGCCGGCACT			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	35807790	35807791	-	CTTATAGACAGGGCCCCGCGGCCGGCACT	INS	MROH8	ENST00000400441	human	ensembl	74_37	-1	known	frame_shift_ins	c.94_93	p.H31fs	1.000:0.052	NULL	superfamily_ARM-type_fold	-	no_errors	MROH8	HGNC	ENSG00000101353	tier1			NA	NA	NA	NA	NA	NA
TRIM3	0	genome.wustl.edu	37	11	6478144	6478144	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	6478144	6478144	C	A	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.812	p.R271L	1.000	smart_Bbox_C	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171	tier1	-	-	75	0	0.00	35	8	18.18
TMEM132A	0	genome.wustl.edu	37	11	60702157	60702157	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	60702157	60702157	G	A	SNP	TMEM132A	ENST00000005286	human	ensembl	74_37	+1	known	missense	c.1760	p.R587H	0.003	NULL	NULL	-	no_errors	TMEM132A	HGNC	ENSG00000006118	tier1	-	-	19	0	0.00	7	5	41.67
GLUL	0	genome.wustl.edu	37	1	182354539	182354539	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	182354539	182354539	G	A	SNP	GLUL	ENST00000311223	human	ensembl	74_37	-1	known	silent	c.756	p.C252	1.000	pfam_Gln_synth_cat_dom	pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta	-	no_errors	GLUL	HGNC	ENSG00000135821	tier1	-	-	25	0	0.00	19	3	13.64
RPL5	0	genome.wustl.edu	37	1	93301874	93301874	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	93301874	93301874	C	T	SNP	RPL5	ENST00000370321	human	ensembl	74_37	+1	known	missense	c.452	p.A151V	1.000	pfam_Ribosomal_L18/L5,prints_Rbsml_L5_euk/L18_arc	pfam_Ribosomal_L18/L5,prints_Rbsml_L5_euk/L18_arc	-	no_errors	RPL5	HGNC	ENSG00000122406	tier1	-	-	38	0	0.00	59	8	11.94
SFTPC	0	genome.wustl.edu	37	8	22020665	22020665	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	22020665	22020665	G	A	SNP	SFTPC	ENST00000318561	human	ensembl	74_37	+1	known	missense	c.274	p.A92T	0.993	pfam_Surfactant_protein_propep,smart_Pulm_surfact_AP	pfam_Surfactant_protein_propep,pfam_BRICHOS_dom,smart_Pulm_surfact_AP,pfscan_BRICHOS_dom	-	no_errors	SFTPC	HGNC	ENSG00000168484	tier1	-	-	33	0	0.00	30	11	26.83
NWD1	0	genome.wustl.edu	37	19	16860994	16860994	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	16860994	16860994	C	T	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.1541	p.T514M	0.187	superfamily_P-loop_NTPase	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	71	0	0.00	51	9	15.00
HMCN1	0	genome.wustl.edu	37	1	186056382	186056382	+	Missense_Mutation	SNP	T	T	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	186056382	186056382	T	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.9080	p.V3027A	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	39	0	0.00	56	34	37.78
ENC1	0	genome.wustl.edu	37	5	73930729	73930729	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	73930729	73930729	G	A	SNP	ENC1	ENST00000302351	human	ensembl	74_37	-1	known	missense	c.1582	p.R528C	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	ENC1	HGNC	ENSG00000171617	tier1	-	-	33	0	0.00	27	10	27.03
UBE3A	0	genome.wustl.edu	37	15	25601107	25601108	+	Frame_Shift_Ins	INS	-	-	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	25601107	25601108	-	A	INS	UBE3A	ENST00000397954	human	ensembl	74_37	-1	known	frame_shift_ins	c.2065_2064	p.G688fs	1.000:1.000	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	pfam_HECT,superfamily_HECT,smart_HECT,pirsf_Ubiquitin-protein_ligase_E6-AP,pfscan_HECT	-	no_errors	UBE3A	HGNC	ENSG00000114062	tier1			58	0	0.00	46	26	36.11
MXI1	0	genome.wustl.edu	37	10	112045982	112045982	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	112045982	112045982	G	A	SNP	MXI1	ENST00000485566	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	MXI1	HGNC	ENSG00000119950	tier1	-	-	60	0	0.00	41	21	33.87
SOAT2	0	genome.wustl.edu	37	12	53509269	53509269	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	53509269	53509269	C	T	SNP	SOAT2	ENST00000301466	human	ensembl	74_37	+1	known	missense	c.539	p.A180V	0.042	pfam_MBOAT_fam	pfam_MBOAT_fam	-	no_errors	SOAT2	HGNC	ENSG00000167780	tier1	-	-	33	0	0.00	8	5	38.46
SLC23A1	0	genome.wustl.edu	37	5	138716376	138716376	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	138716376	138716376	G	A	SNP	SLC23A1	ENST00000503919	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC23A1	HGNC	ENSG00000170482	tier1	-	-	50	0	0.00	59	8	11.94
ZNF335	0	genome.wustl.edu	37	20	44596975	44596975	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	44596975	44596975	C	A	SNP	ZNF335	ENST00000322927	human	ensembl	74_37	-1	known	missense	c.469	p.D157Y	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026	tier1	-	-	25	0	0.00	24	4	14.29
SOGA2	0	genome.wustl.edu	37	18	8786056	8786056	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	18	8786056	8786056	C	T	SNP	SOGA2	ENST00000520495	human	ensembl	74_37	+1	known	missense	c.1417	p.R473W	1.000	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	-	-	47	0	0.00	20	5	20.00
SARS	0	genome.wustl.edu	37	1	109777945	109777945	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	109777945	109777945	G	A	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	silent	c.861	p.P287	0.205	pfam_aa-tRNA-synt_IIb_cons-dom,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698	tier1	-	-	28	0	0.00	14	11	44.00
CUL1	0	genome.wustl.edu	37	7	148489822	148489822	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	148489822	148489822	C	T	SNP	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	missense	c.1811	p.S604L	1.000	pfam_Cullin_N,superfamily_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL1	HGNC	ENSG00000055130	tier1	-	-	29	0	0.00	29	9	23.68
SETD8	0	genome.wustl.edu	37	12	123889536	123889536	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	123889536	123889536	G	A	SNP	SETD8	ENST00000330479	human	ensembl	74_37	+1	known	missense	c.763	p.A255T	1.000	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	-	no_errors	SETD8	HGNC	ENSG00000183955	tier1	-	-	35	0	0.00	21	13	38.24
ARID5A	0	genome.wustl.edu	37	2	97217649	97217649	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	97217649	97217649	G	A	SNP	ARID5A	ENST00000357485	human	ensembl	74_37	+1	known	missense	c.1384	p.V462M	0.997	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5A	HGNC	ENSG00000196843	tier1	-	-	14	0	0.00	6	8	57.14
KRT6A	0	genome.wustl.edu	37	12	52886583	52886583	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	52886583	52886583	G	A	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	silent	c.390	p.C130	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420	tier1	-	-	75	0	0.00	67	9	11.84
PTPRK	0	genome.wustl.edu	37	6	128306968	128306968	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	128306968	128306968	G	A	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	missense	c.3200	p.P1067L	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1	-	-	56	0	0.00	54	13	19.40
PNPLA8	0	genome.wustl.edu	37	7	108154649	108154649	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	108154649	108154649	C	A	SNP	PNPLA8	ENST00000257694	human	ensembl	74_37	-1	known	missense	c.1145	p.R382M	1.000	superfamily_ARM-type_fold	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_ARM-type_fold	-	no_errors	PNPLA8	HGNC	ENSG00000135241	tier1	-	-	72	0	0.00	51	24	32.00
H2AFY	0	genome.wustl.edu	37	5	134724634	134724634	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	134724634	134724634	G	A	SNP	H2AFY	ENST00000511689	human	ensembl	74_37	-1	known	silent	c.150	p.A50	0.845	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,pirsf_Core_histone_macro-H2A,prints_Histone_H2A	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,prints_Histone_H2A,pfscan_Macro_dom	-	no_errors	H2AFY	HGNC	ENSG00000113648	tier1	-	-	51	0	0.00	47	21	30.88
ATP11A	0	genome.wustl.edu	37	13	113464952	113464952	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	113464952	113464952	G	A	SNP	ATP11A	ENST00000375630	human	ensembl	74_37	+1	known	missense	c.353	p.R118Q	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11A	HGNC	ENSG00000068650	tier1	-	-	42	0	0.00	24	12	33.33
KRTAP25-1	0	genome.wustl.edu	37	21	31661763	31661763	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	21	31661763	31661763	G	-	DEL	KRTAP25-1	ENST00000416044	human	ensembl	74_37	-1	known	frame_shift_del	c.46	p.Q16fs	0.000	NULL	pfam_KRTAP_PMG	-	no_errors	KRTAP25-1	HGNC	ENSG00000232263	tier1			62	0	0.00	59	24	28.92
LOC150051	0	genome.wustl.edu	37	21	32932376	32932376	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	21	32932376	32932376	C	T	SNP	LOC150051	ENST00000433071	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP000251.3	Clone_based_vega_gene	ENSG00000237594	tier1	-	-	47	0	0.00	30	7	18.42
NADK2	0	genome.wustl.edu	37	5	36227666	36227666	+	Missense_Mutation	SNP	A	A	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	36227666	36227666	A	C	SNP	NADK2	ENST00000381937	human	ensembl	74_37	-1	putative	missense	c.302	p.L101R	1.000	pirsf_ATP-NAD-like_euk	pfam_PolyP/ATP_NADK_prd,superfamily_ATP-NAD_kinase_PpnK-typ,pirsf_ATP-NAD-like_euk	-	no_errors	NADK2	HGNC	ENSG00000152620	tier1	-	-	105	0	0.00	134	16	10.67
ARHGAP11B	0	genome.wustl.edu	37	15	31042691	31042691	+	RNA	SNP	A	A	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	31042691	31042691	A	C	SNP	ARHGAP11B	ENST00000562954	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARHGAP11B	HGNC	ENSG00000187951	tier1	-	-	45	0	0.00	26	22	44.90
PCSK4	0	genome.wustl.edu	37	19	1486915	1486915	+	Nonsense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	1486915	1486915	G	A	SNP	PCSK4	ENST00000588195	human	ensembl	74_37	-1	known	nonsense	c.991	p.R331*	1.000	NULL	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept	-	no_errors	PCSK4	HGNC	ENSG00000115257	tier1	rs146576658	-	84	0	0.00	48	38	44.19
ARHGAP31	0	genome.wustl.edu	37	3	119134704	119134704	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	119134704	119134704	C	T	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.3928	p.R1310C	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081	tier1	-	-	18	0	0.00	26	7	21.21
PCDHGB4	0	genome.wustl.edu	37	5	140767512	140767512	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	140767512	140767512	C	A	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	missense	c.61	p.L21M	0.041	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953	tier1	-	-	38	0	0.00	22	7	24.14
SENP3	0	genome.wustl.edu	37	17	7466910	7466910	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	17	7466910	7466910	G	T	SNP	SENP3	ENST00000429205	human	ensembl	74_37	+1	known	missense	c.517	p.G173W	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP3	HGNC	ENSG00000161956	tier1	-	-	38	0	0.00	32	10	23.81
ARMCX4	0	genome.wustl.edu	37	X	100750085	100750085	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	100750085	100750085	G	A	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.6509	p.R2170H	1.000	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	18	0	0.00	14	17	54.84
GPALPP1	0	genome.wustl.edu	37	13	45580382	45580383	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	45580382	45580383	-	T	INS	GPALPP1	ENST00000361121	human	ensembl	74_37	+1	known	frame_shift_ins	c.267_268	p.G91fs	0.677:0.993	NULL	pfam_DUF3752	-	no_errors	GPALPP1	HGNC	ENSG00000133114	tier1			140	0	0.00	151	20	11.70
KATNB1	0	genome.wustl.edu	37	16	57790824	57790824	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	57790824	57790824	G	A	SNP	KATNB1	ENST00000379661	human	ensembl	74_37	+1	known	missense	c.1934	p.R645H	0.996	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	KATNB1	HGNC	ENSG00000140854	tier1	-	-	55	0	0.00	53	34	38.64
ARHGEF2	0	genome.wustl.edu	37	1	155924740	155924740	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	155924740	155924740	A	G	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.1739	p.F580S	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584	tier1	-	-	43	0	0.00	33	4	10.81
EDEM2	0	genome.wustl.edu	37	20	33703483	33703483	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	33703483	33703483	T	A	SNP	EDEM2	ENST00000374492	human	ensembl	74_37	-1	known	missense	c.1490	p.E497V	1.000	NULL	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM2	HGNC	ENSG00000088298	tier1	-	-	46	0	0.00	15	15	50.00
EPHA1	0	genome.wustl.edu	37	7	143087646	143087647	+	RNA	INS	-	-	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	143087646	143087647	-	C	INS	EPHA1	ENST00000458129	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.006:0.006	-	-	-	no_errors	EPHA1	HGNC	ENSG00000146904	tier1			38	0	0.00	33	8	19.51
DCTN1	0	genome.wustl.edu	37	2	74596522	74596522	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	74596522	74596522	G	A	SNP	DCTN1	ENST00000361874	human	ensembl	74_37	-1	known	missense	c.1489	p.R497C	0.942	superfamily_P-loop_NTPase	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,superfamily_P-loop_NTPase,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843	tier1	-	-	13	0	0.00	9	9	50.00
C15orf27	0	genome.wustl.edu	37	15	76463371	76463371	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	76463371	76463371	C	T	SNP	C15orf27	ENST00000388942	human	ensembl	74_37	+1	known	missense	c.551	p.P184L	1.000	NULL	NULL	-	no_errors	C15orf27	HGNC	ENSG00000169758	tier1	-	-	43	0	0.00	23	20	46.51
GOLGA6L4	0	genome.wustl.edu	37	15	82932257	82932258	+	RNA	DEL	AC	AC	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	82932257	82932258	AC	-	DEL	GOLGA6L4	ENST00000560844	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.140:0.148	-	-	-	no_errors	RP13-996F3.5	Clone_based_vega_gene	ENSG00000215749	tier1			9	0	0.00	5	3	37.50
UNC79	0	genome.wustl.edu	37	14	93940446	93940446	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	14	93940446	93940446	G	A	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.155	p.R52H	1.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958	tier1	-	-	32	0	0.00	23	18	43.90
ECHDC2	0	genome.wustl.edu	37	1	53364884	53364884	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	53364884	53364884	C	T	SNP	ECHDC2	ENST00000371522	human	ensembl	74_37	-1	known	missense	c.715	p.V239M	1.000	NULL	pfam_Crotonase_core_superfam	-	no_errors	ECHDC2	HGNC	ENSG00000121310	tier1	-	-	50	0	0.00	47	8	14.55
MLLT4	0	genome.wustl.edu	37	6	168352571	168352571	+	Missense_Mutation	SNP	T	T	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	168352571	168352571	T	A	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	missense	c.4516	p.S1506T	0.172	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	tier1	-	-	18	0	0.00	18	12	40.00
GPHA2	0	genome.wustl.edu	37	11	64702261	64702261	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	64702261	64702261	C	T	SNP	GPHA2	ENST00000279168	human	ensembl	74_37	-1	known	missense	c.374	p.R125H	1.000	pfam_DAN,pfscan_Cys_knot_C,pfscan_Glyco_hormone	pfam_DAN,pfscan_Cys_knot_C,pfscan_Glyco_hormone	-	no_errors	GPHA2	HGNC	ENSG00000149735	tier1	-	-	58	0	0.00	54	13	19.40
CCDC19	0	genome.wustl.edu	37	1	159857724	159857724	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	159857724	159857724	C	T	SNP	CCDC19	ENST00000368099	human	ensembl	74_37	-1	known	silent	c.495	p.L165	1.000	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085	tier1	-	-	53	0	0.00	49	16	24.62
PTPRS	0	genome.wustl.edu	37	19	5206828	5206828	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	5206828	5206828	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.5807	p.A1936V	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1	-	-	54	0	0.00	29	16	35.56
ARHGEF17	0	genome.wustl.edu	37	11	73021102	73021102	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	73021102	73021102	G	A	SNP	ARHGEF17	ENST00000263674	human	ensembl	74_37	+1	known	silent	c.1419	p.T473	0.060	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237	tier1	-	-	110	0	0.00	73	27	27.00
FRMPD3	0	genome.wustl.edu	37	X	106793287	106793289	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	106793287	106793289	GAA	-	DEL	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	in_frame_del	c.510_512	p.K172in_frame_del	1.000:1.000:1.000	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1			11	0	0.00	28	17	37.78
BBOX1	0	genome.wustl.edu	37	11	27077051	27077051	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	27077051	27077051	A	G	SNP	BBOX1	ENST00000263182	human	ensembl	74_37	+1	known	missense	c.74	p.E25G	0.001	pfam_DUF971,tigrfam_2-oxoglut_dOase	pfam_Taurine_dOase,pfam_DUF971,tigrfam_2-oxoglut_dOase	-	no_errors	BBOX1	HGNC	ENSG00000129151	tier1	-	-	44	0	0.00	35	11	23.91
RANBP10	0	genome.wustl.edu	37	16	67765377	67765380	+	Frame_Shift_Del	DEL	TGTC	TGTC	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	TGTC	TGTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	67765377	67765380	TGTC	-	DEL	RANBP10	ENST00000317506	human	ensembl	74_37	-1	known	frame_shift_del	c.887_884	p.R295fs	1.000:1.000:1.000:1.000	smart_CTLH_C,pfscan_CTLH_C	pfam_SPRY_rcpt,pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_CTLH_C,smart_CRA_dom,pfscan_B30.2/SPRY,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RANBP10	HGNC	ENSG00000141084	tier1			89	0	0.00	49	39	44.32
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			22	0	0.00	22	12	35.29
EPS8L1	0	genome.wustl.edu	37	19	55594928	55594928	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	55594928	55594928	G	-	DEL	EPS8L1	ENST00000586329	human	ensembl	74_37	+1	novel	frame_shift_del	c.1343	p.R450fs	0.000	NULL	pfam_PTB,superfamily_SH3_domain	-	no_errors	EPS8L1	HGNC	ENSG00000131037	tier1			32	0	0.00	23	4	14.81
SCN2A	0	genome.wustl.edu	37	2	166170230	166170230	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	166170230	166170230	C	T	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.1135	p.R379C	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	53	0	0.00	49	21	30.00
SELL	0	genome.wustl.edu	37	1	169679644	169679644	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	169679644	169679644	T	G	SNP	SELL	ENST00000236147	human	ensembl	74_37	-1	known	missense	c.57	p.K19N	0.013	pirsf_L-selectin	pfam_C-type_lectin,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_EG-like_dom,smart_Sushi_SCR_CCP,pirsf_L-selectin,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELL	HGNC	ENSG00000188404	tier1	-	-	52	0	0.00	91	8	8.08
LOC100507431	0	genome.wustl.edu	37	11	130716045	130716045	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	130716045	130716045	C	T	SNP	LOC100507431	ENST00000533434	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	RP11-890B15.2	Clone_based_vega_gene	ENSG00000254842	tier1	-	-	150	0	0.00	102	50	32.89
KEAP1	0	genome.wustl.edu	37	19	10610476	10610476	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	10610476	10610476	G	A	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	silent	c.234	p.D78	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999	tier1	-	-	18	0	0.00	10	7	41.18
AMACR	0	genome.wustl.edu	37	5	33989126	33989126	+	RNA	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	33989126	33989126	G	T	SNP	AMACR	ENST00000514195	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	AMACR	HGNC	ENSG00000242110	tier1	-	-	41	0	0.00	25	15	37.50
ALS2CL	0	genome.wustl.edu	37	3	46727052	46727052	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	46727052	46727052	C	T	SNP	ALS2CL	ENST00000318962	human	ensembl	74_37	-1	known	missense	c.749	p.R250H	0.970	NULL	pfam_MORN,pfam_VPS9,superfamily_DH-domain,smart_MORN,pfscan_VPS9	-	no_errors	ALS2CL	HGNC	ENSG00000178038	tier1	-	-	19	0	0.00	23	18	43.90
NEGR1	0	genome.wustl.edu	37	1	71873148	71873148	+	Missense_Mutation	SNP	T	T	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	71873148	71873148	T	G	SNP	NEGR1	ENST00000357731	human	ensembl	74_37	-1	known	missense	c.1046	p.K349T	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NEGR1	HGNC	ENSG00000172260	tier1	-	-	62	0	0.00	73	10	12.05
EPB41L4A	0	genome.wustl.edu	37	5	111570402	111570402	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	111570402	111570402	C	A	SNP	EPB41L4A	ENST00000261486	human	ensembl	74_37	-1	known	missense	c.1016	p.R339L	1.000	pfam_FERM-adjacent	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L4A	HGNC	ENSG00000129595	tier1	-	-	51	0	0.00	88	14	13.73
KLHDC3	0	genome.wustl.edu	37	6	42986276	42986276	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	42986276	42986276	C	T	SNP	KLHDC3	ENST00000326974	human	ensembl	74_37	+1	known	missense	c.715	p.R239C	1.000	pfam_Kelch_1	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	KLHDC3	HGNC	ENSG00000124702	tier1	-	-	18	0	0.00	20	6	23.08
CCDC41	0	genome.wustl.edu	37	12	94703716	94703716	+	Missense_Mutation	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	94703716	94703716	A	G	SNP	CCDC41	ENST00000339839	human	ensembl	74_37	-1	known	missense	c.1979	p.L660P	0.005	NULL	NULL	-	no_errors	CCDC41	HGNC	ENSG00000173588	tier1	-	-	78	0	0.00	83	40	32.52
PAXIP1	0	genome.wustl.edu	37	7	154755423	154755423	+	Silent	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	154755423	154755423	C	A	SNP	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	silent	c.1947	p.T649	0.252	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212	tier1	-	-	58	0	0.00	44	4	8.33
BEX2	0	genome.wustl.edu	37	X	102564733	102564733	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	102564733	102564733	C	T	SNP	BEX2	ENST00000536889	human	ensembl	74_37	-1	known	missense	c.268	p.V90I	0.034	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	BEX2	HGNC	ENSG00000133134	tier1	-	-	19	0	0.00	12	15	55.56
WNK3	0	genome.wustl.edu	37	X	54275146	54275146	+	Missense_Mutation	SNP	C	C	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	54275146	54275146	C	A	SNP	WNK3	ENST00000354646	human	ensembl	74_37	-1	known	missense	c.3635	p.S1212I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK3	HGNC	ENSG00000196632	tier1	-	-	61	0	0.00	58	24	29.27
CEP350	0	genome.wustl.edu	37	1	180010302	180010302	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	180010302	180010302	G	A	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	silent	c.4140	p.L1380	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1	-	-	69	0	0.00	46	31	39.24
ZDHHC3	0	genome.wustl.edu	37	3	44968199	44968199	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	44968199	44968199	C	T	SNP	ZDHHC3	ENST00000296127	human	ensembl	74_37	-1	known	silent	c.966	p.P322	0.998	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC3	HGNC	ENSG00000163812	tier1	-	-	50	0	0.00	34	20	37.04
DNAJC17	0	genome.wustl.edu	37	15	41060224	41060224	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	15	41060224	41060224	C	T	SNP	DNAJC17	ENST00000220496	human	ensembl	74_37	-1	known	missense	c.829	p.V277I	1.000	NULL	pfam_DnaJ_domain,pfam_RRM_dom,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC17	HGNC	ENSG00000104129	tier1	-	-	75	0	0.00	69	14	16.87
CEP72	0	genome.wustl.edu	37	5	639252	639252	+	Nonsense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	639252	639252	C	T	SNP	CEP72	ENST00000264935	human	ensembl	74_37	+1	known	nonsense	c.1255	p.Q419*	0.099	NULL	smart_Leu-rich_rpt_typical-subtyp,smart_U2A'_phosphoprotein32A_C	-	no_errors	CEP72	HGNC	ENSG00000112877	tier1	-	-	35	0	0.00	24	12	33.33
ENSG00000200294	0	genome.wustl.edu	37	10	73940732	73940733	+	RNA	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	73940732	73940733	-	T	INS	ENSG00000200294	ENST00000363424	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.371:0.371	-	-	-	no_errors	SNORA36	RFAM	ENSG00000200294	tier1			13	0	0.00	12	6	33.33
ATF6B	0	genome.wustl.edu	37	6	32093827	32093828	+	RNA	INS	-	-	AC			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	32093827	32093828	-	AC	INS	ATF6B	ENST00000468502	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ATF6B	HGNC	ENSG00000213676	tier1			27	0	0.00	26	7	21.21
KCNA5	0	genome.wustl.edu	37	12	5153711	5153711	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	5153711	5153711	C	T	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.398	p.T133M	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv1.5	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	64	0	0.00	35	20	36.36
EPHA3	0	genome.wustl.edu	37	3	89391179	89391179	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	89391179	89391179	G	A	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	silent	c.1245	p.V415	0.994	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	tier1	-	-	24	0	0.00	21	7	25.00
GPD2	0	genome.wustl.edu	37	2	157414067	157414067	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	157414067	157414067	C	T	SNP	GPD2	ENST00000310454	human	ensembl	74_37	+1	known	missense	c.1138	p.R380C	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_G3P_DH_FAD-dep	-	no_errors	GPD2	HGNC	ENSG00000115159	tier1	-	-	28	0	0.00	29	6	17.14
NLGN3	0	genome.wustl.edu	37	X	70389119	70389119	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	X	70389119	70389119	G	A	SNP	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	silent	c.1719	p.P573	0.573	pfam_CarbesteraseB,prints_Neuroligin	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338	tier1	-	-	39	0	0.00	42	31	42.47
HS6ST1	0	genome.wustl.edu	37	2	129075797	129075797	+	Missense_Mutation	SNP	A	A	C			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	129075797	129075797	A	C	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	missense	c.341	p.V114G	1.000	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	tier1	rs199993343	-	26	0	0.00	14	3	17.65
SMPD2	0	genome.wustl.edu	37	6	109764231	109764231	+	Nonsense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	109764231	109764231	C	T	SNP	SMPD2	ENST00000258052	human	ensembl	74_37	+1	known	nonsense	c.676	p.Q226*	0.002	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	SMPD2	HGNC	ENSG00000135587	tier1	-	-	25	0	0.00	9	4	30.77
FAS	0	genome.wustl.edu	37	10	90768708	90768708	+	Frame_Shift_Del	DEL	T	T	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	10	90768708	90768708	T	-	DEL	FAS	ENST00000355740	human	ensembl	74_37	+1	known	frame_shift_del	c.397	p.C135fs	0.881	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_Fas_rcpt	pfam_Death_domain,pfam_TNFR/NGFR_Cys_rich_reg,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_Fas_rcpt	-	no_errors	FAS	HGNC	ENSG00000026103	tier1			83	0	0.00	81	10	10.99
HNF1A	0	genome.wustl.edu	37	12	121432065	121432065	+	Missense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	121432065	121432065	G	T	SNP	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	missense	c.812	p.R271L	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100	tier1	-	-	35	0	0.00	28	10	26.32
POSTN	0	genome.wustl.edu	37	13	38154703	38154703	+	Silent	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	38154703	38154703	G	T	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	silent	c.1524	p.R508	0.986	pfam_FAS1_domain,superfamily_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1	-	-	64	0	0.00	61	6	8.96
CUL1	0	genome.wustl.edu	37	7	148463663	148463663	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	148463663	148463663	G	A	SNP	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	missense	c.800	p.R267H	1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL1	HGNC	ENSG00000055130	tier1	-	-	168	0	0.00	153	36	18.37
SPTY2D1	0	genome.wustl.edu	37	11	18638500	18638501	+	Frame_Shift_Ins	INS	-	-	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	18638500	18638501	-	T	INS	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	frame_shift_ins	c.97_96	p.D32fs	1.000:1.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119	tier1			72	0	0.00	75	13	14.77
CELA2A	0	genome.wustl.edu	37	1	15788100	15788100	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	15788100	15788100	C	T	SNP	CELA2A	ENST00000359621	human	ensembl	74_37	+1	known	silent	c.174	p.C58	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA2A	HGNC	ENSG00000142615	tier1	-	-	63	0	0.00	50	9	15.25
DPY19L2P1	0	genome.wustl.edu	37	7	35131548	35131548	+	RNA	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	35131548	35131548	G	A	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	39	0	0.00	78	15	16.13
RHBDD2	0	genome.wustl.edu	37	7	75512982	75512982	+	RNA	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	75512982	75512982	C	T	SNP	RHBDD2	ENST00000467406	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.007	-	-	-	no_errors	RHBDD2	HGNC	ENSG00000005486	tier1	-	-	54	0	0.00	44	4	8.33
SLC26A5	0	genome.wustl.edu	37	7	103019780	103019780	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	103019780	103019780	C	T	SNP	SLC26A5	ENST00000306312	human	ensembl	74_37	-1	known	silent	c.1587	p.V529	1.000	pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A5	HGNC	ENSG00000170615	tier1	-	-	50	0	0.00	29	4	12.12
TRIM26	0	genome.wustl.edu	37	6	30153712	30153712	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	6	30153712	30153712	G	A	SNP	TRIM26	ENST00000437089	human	ensembl	74_37	-1	known	missense	c.1561	p.R521C	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM26	HGNC	ENSG00000234127	tier1	-	-	40	0	0.00	25	6	19.35
TADA1	0	genome.wustl.edu	37	1	166826839	166826839	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	166826839	166826839	G	A	SNP	TADA1	ENST00000367874	human	ensembl	74_37	-1	known	missense	c.973	p.R325C	1.000	NULL	superfamily_Histone-fold	-	no_errors	TADA1	HGNC	ENSG00000152382	tier1	rs200689473	-	37	0	0.00	33	15	31.25
CCDC132	0	genome.wustl.edu	37	7	92902025	92902025	+	Nonsense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	7	92902025	92902025	C	T	SNP	CCDC132	ENST00000305866	human	ensembl	74_37	+1	known	nonsense	c.781	p.R261*	1.000	pfam_Vacuolar_sorting-assoc_54	pfam_Vacuolar_sorting-assoc_54,pfam_DUF2451_C	-	no_errors	CCDC132	HGNC	ENSG00000004766	tier1	-	-	40	0	0.00	47	18	27.69
TOMM40	0	genome.wustl.edu	37	19	45404610	45404610	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	45404610	45404610	G	A	SNP	TOMM40	ENST00000592434	human	ensembl	74_37	+1	known	silent	c.989	p.*330	0.551	NULL	pfam_Porin_Euk/Tom40	-	no_errors	TOMM40	HGNC	ENSG00000130204	tier1	-	-	42	0	0.00	33	5	13.16
ARID2	0	genome.wustl.edu	37	12	46245627	46245627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	46245627	46245627	A	-	DEL	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	frame_shift_del	c.3721	p.I1242fs	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1			37	0	0.00	44	10	18.52
WBP4	0	genome.wustl.edu	37	13	41656910	41656910	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	13	41656910	41656910	G	A	SNP	WBP4	ENST00000379487	human	ensembl	74_37	+1	known	missense	c.991	p.G331R	0.135	NULL	pfam_WW_dom,pfam_Znf_U1-C,superfamily_WW_dom,smart_Znf_U1,smart_WW_dom,pfscan_WW_dom,pfscan_Znf_C2H2_matrin	-	no_errors	WBP4	HGNC	ENSG00000120688	tier1	-	-	54	0	0.00	30	23	43.40
EIF2S2	0	genome.wustl.edu	37	20	32686422	32686422	+	Silent	SNP	A	A	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	32686422	32686422	A	G	SNP	EIF2S2	ENST00000374980	human	ensembl	74_37	-1	known	silent	c.315	p.S105	1.000	NULL	pfam_Transl_init_fac_IF2/IF5,superfamily_Transl_init_fac_IF2/IF5_N,superfamily_Transl_init_fac_IF2/IF5_Zn-bd,smart_Transl_init_fac_IF2/IF5	-	no_errors	EIF2S2	HGNC	ENSG00000125977	tier1	-	-	128	0	0.00	85	24	22.02
PSME4	0	genome.wustl.edu	37	2	54092486	54092486	+	RNA	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	54092486	54092486	A	-	DEL	PSME4	ENST00000476586	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1			26	0	0.00	16	3	15.79
ERF	0	genome.wustl.edu	37	19	42753368	42753368	+	Frame_Shift_Del	DEL	C	C	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	42753368	42753368	C	-	DEL	ERF	ENST00000222329	human	ensembl	74_37	-1	known	frame_shift_del	c.896	p.G299fs	0.941	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722	tier1			52	0	0.00	41	9	18.00
ART1	0	genome.wustl.edu	37	11	3681429	3681429	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	11	3681429	3681429	C	T	SNP	ART1	ENST00000250693	human	ensembl	74_37	+1	known	missense	c.680	p.A227V	0.011	pfam_ART,prints_ART	pfam_ART,prints_ART	-	no_errors	ART1	HGNC	ENSG00000129744	tier1	-	-	55	0	0.00	35	28	44.44
AMT	0	genome.wustl.edu	37	3	49459733	49459733	+	RNA	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	49459733	49459733	G	T	SNP	AMT	ENST00000487589	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AMT	HGNC	ENSG00000145020	tier1	-	-	36	0	0.00	31	7	18.42
LAMA5	0	genome.wustl.edu	37	20	60891033	60891033	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	20	60891033	60891033	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.7838	p.A2613V	0.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	71	0	0.00	57	36	38.71
CMTR2	0	genome.wustl.edu	37	16	71318037	71318037	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	71318037	71318037	G	A	SNP	CMTR2	ENST00000338099	human	ensembl	74_37	-1	known	missense	c.1787	p.P596L	0.001	NULL	pfam_rRNA_MeTrfase_FtsJ_dom	-	no_errors	CMTR2	HGNC	ENSG00000180917	tier1	rs189091912	GMAF=0.0005	50	0	0.00	42	24	36.36
SOWAHB	0	genome.wustl.edu	37	4	77817627	77817627	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	4	77817627	77817627	C	G	SNP	SOWAHB	ENST00000334306	human	ensembl	74_37	-1	known	missense	c.1376	p.R459T	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHB	HGNC	ENSG00000186212	tier1	-	-	60	0	0.00	65	14	17.72
BRPF1	0	genome.wustl.edu	37	3	9783085	9783085	+	Nonsense_Mutation	SNP	G	G	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	9783085	9783085	G	T	SNP	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	nonsense	c.1816	p.E606*	1.000	superfamily_Bromodomain	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983	tier1	-	-	51	0	0.00	47	5	9.62
CA2	0	genome.wustl.edu	37	8	86392969	86392969	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	86392969	86392969	G	A	SNP	CA2	ENST00000285379	human	ensembl	74_37	+1	known	missense	c.734	p.R245H	0.998	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA2	HGNC	ENSG00000104267	tier1	-	-	40	0	0.00	41	6	12.77
PSD2	0	genome.wustl.edu	37	5	139216768	139216768	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	5	139216768	139216768	G	A	SNP	PSD2	ENST00000274710	human	ensembl	74_37	+1	known	missense	c.1610	p.R537H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD2	HGNC	ENSG00000146005	tier1	-	-	69	0	0.00	56	26	31.71
SLC12A4	0	genome.wustl.edu	37	16	67985101	67985101	+	Silent	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	67985101	67985101	G	A	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	silent	c.1245	p.V415	0.597	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	tier1	-	-	10	0	0.00	7	10	58.82
WWP1	0	genome.wustl.edu	37	8	87473537	87473537	+	Missense_Mutation	SNP	G	G	A			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	8	87473537	87473537	G	A	SNP	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	missense	c.2584	p.A862T	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124	tier1	-	-	62	0	0.00	59	7	10.61
ANKS3	0	genome.wustl.edu	37	16	4780042	4780042	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	16	4780042	4780042	G	-	DEL	ANKS3	ENST00000304283	human	ensembl	74_37	-1	known	frame_shift_del	c.109	p.L37fs	0.948	smart_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS3	HGNC	ENSG00000168096	tier1			29	0	0.00	8	13	61.90
C3orf83	0	genome.wustl.edu	37	3	12586834	12586834	+	Missense_Mutation	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	3	12586834	12586834	C	T	SNP	C3orf83	ENST00000561645	human	ensembl	74_37	-1	known	missense	c.130	p.A44T	0.986	NULL	NULL	-	no_errors	C3orf83	HGNC	ENSG00000225526	tier1	-	-	43	0	0.00	34	4	10.53
ATP8B3	0	genome.wustl.edu	37	19	1799764	1799764	+	Frame_Shift_Del	DEL	A	A	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	19	1799764	1799764	A	-	DEL	ATP8B3	ENST00000526092	human	ensembl	74_37	-1	putative	frame_shift_del	c.1575	p.F525fs	0.016	NULL	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			10	0	0.00	17	5	22.73
SEC16B	0	genome.wustl.edu	37	1	177927333	177927333	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	1	177927333	177927333	G	-	DEL	SEC16B	ENST00000308284	human	ensembl	74_37	-1	known	frame_shift_del	c.1299	p.S434fs	0.033	NULL	NULL	-	no_errors	SEC16B	HGNC	ENSG00000120341	tier1			37	0	0.00	16	4	20.00
LRRTM1	0	genome.wustl.edu	37	2	80529882	80529882	+	Missense_Mutation	SNP	C	C	G			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	2	80529882	80529882	C	G	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.1063	p.D355H	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	39	0	0.00	15	6	28.57
KLRF2	0	genome.wustl.edu	37	12	10041363	10041363	+	Silent	SNP	C	C	T			TCGA-3B-A9HT-01A-11D-A38Z-09	TCGA-3B-A9HT-10A-01D-A38Z-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	8fc56a38-29d4-4399-bf98-d32e7186235a	08c672de-4763-4be1-856b-78960511fd90	12	10041363	10041363	C	T	SNP	KLRF2	ENST00000535540	human	ensembl	74_37	+1	known	silent	c.201	p.N67	0.274	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	KLRF2	HGNC	ENSG00000256797	tier1	-	-	62	0	0.00	58	37	38.95
