Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
OXR1	0	genome.wustl.edu	37	8	107718618	107718618	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	107718618	107718618	A	T	SNP	OXR1	ENST00000442977	human	ensembl	74_37	+1	known	missense	c.872	p.D291V	1.000	NULL	pfam_TLDc,pfam_LysM_dom,pfam_GRAM,smart_LysM_dom,smart_TLDc	-	no_errors	OXR1	HGNC	ENSG00000164830	tier1	-	-	28	0	0.00	10	5	33.33
DNM1P46	0	genome.wustl.edu	37	15	100331972	100331972	+	RNA	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	15	100331972	100331972	G	A	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.316	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	tier1	-	-	119	0	0.00	107	36	25.17
OR4A15	0	genome.wustl.edu	37	11	55135991	55135991	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	55135991	55135991	C	T	SNP	OR4A15	ENST00000314706	human	ensembl	74_37	+1	known	missense	c.632	p.P211L	0.008	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A15	HGNC	ENSG00000181958	tier1	-	-	205	0	0.00	83	46	35.66
MIR3191	0	genome.wustl.edu	37	19	47730266	47730266	+	RNA	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	47730266	47730266	G	C	SNP	MIR3191	ENST00000577414	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR3191	HGNC	ENSG00000265134	tier1	-	-	114	0	0.00	43	9	17.31
EML1	0	genome.wustl.edu	37	14	100402664	100402664	+	Silent	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	14	100402664	100402664	C	A	SNP	EML1	ENST00000334192	human	ensembl	74_37	+1	known	silent	c.2145	p.I715	1.000	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629	tier1	-	-	53	0	0.00	84	13	13.13
ATP1A4	0	genome.wustl.edu	37	1	160125005	160125005	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	160125005	160125005	G	C	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	missense	c.378	p.Q126H	0.934	tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A4	HGNC	ENSG00000132681	tier1	-	-	73	0	0.00	172	24	12.18
PSPH	0	genome.wustl.edu	37	7	56079282	56079283	+	RNA	INS	-	-	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	7	56079282	56079283	-	A	INS	PSPH	ENST00000459834	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1			19	0	0.00	8	2	20.00
PROM1	0	genome.wustl.edu	37	4	16014945	16014945	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	4	16014945	16014945	T	C	SNP	PROM1	ENST00000447510	human	ensembl	74_37	-1	known	missense	c.1094	p.N365S	0.999	pfam_Prominin	pfam_Prominin	-	no_errors	PROM1	HGNC	ENSG00000007062	tier1	-	-	37	0	0.00	23	8	25.81
BCAN	0	genome.wustl.edu	37	1	156627954	156627954	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	156627954	156627954	C	G	SNP	BCAN	ENST00000329117	human	ensembl	74_37	+1	known	missense	c.2328	p.S776R	1.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,prints_Link,prints_AntifreezeII,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom	-	no_errors	BCAN	HGNC	ENSG00000132692	tier1	-	-	105	0	0.00	54	28	34.15
PASK	0	genome.wustl.edu	37	2	242046865	242046865	+	Silent	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	242046865	242046865	G	A	SNP	PASK	ENST00000358649	human	ensembl	74_37	-1	known	silent	c.3738	p.R1246	0.995	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PAS_fold,superfamily_Kinase-like_dom,superfamily_PAS,smart_PAS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_PAS,pfscan_Prot_kinase_dom,tigrfam_PAS	-	no_errors	PASK	HGNC	ENSG00000115687	tier1	-	-	83	0	0.00	12	29	70.73
NCAPG2	0	genome.wustl.edu	37	7	158457328	158457328	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	7	158457328	158457328	G	A	SNP	NCAPG2	ENST00000409339	human	ensembl	74_37	-1	known	missense	c.1594	p.P532S	1.000	superfamily_ARM-type_fold	pfam_Condensin2_G2,superfamily_ARM-type_fold	-	no_errors	NCAPG2	HGNC	ENSG00000146918	tier1	-	-	42	0	0.00	36	4	10.00
MEN1	0	genome.wustl.edu	37	11	64573228	64573228	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	64573228	64573228	C	T	SNP	MEN1	ENST00000337652	human	ensembl	74_37	-1	known	missense	c.1079	p.R360Q	1.000	pfam_Menin	pfam_Menin	-	no_errors	MEN1	HGNC	ENSG00000133895	tier1	-	-	72	0	0.00	41	4	8.89
PAFAH2	0	genome.wustl.edu	37	1	26308893	26308893	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	26308893	26308893	T	G	SNP	PAFAH2	ENST00000374282	human	ensembl	74_37	-1	known	missense	c.628	p.N210H	0.998	pfam_PAF_acetylhydro,pirsf_PAF_acetylhydro_eukaryote	pfam_PAF_acetylhydro,pfam_Peptidase_S9,pirsf_PAF_acetylhydro_eukaryote	-	no_errors	PAFAH2	HGNC	ENSG00000158006	tier1	-	-	52	0	0.00	31	8	20.51
DNAH5	0	genome.wustl.edu	37	5	13727766	13727766	+	Splice_Site	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	13727766	13727766	C	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	splice_site	c.11884-1	e70-1	1.000	-	-	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	52	0	0.00	21	31	59.62
CCDC6	0	genome.wustl.edu	37	10	61665973	61665973	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	61665973	61665973	G	T	SNP	CCDC6	ENST00000263102	human	ensembl	74_37	-1	known	missense	c.210	p.N70K	1.000	pfam_DUF2046	pfam_DUF2046	-	no_errors	CCDC6	HGNC	ENSG00000108091	tier1	-	-	76	0	0.00	35	4	10.26
GPR123	0	genome.wustl.edu	37	10	134906510	134906510	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	134906510	134906510	G	A	SNP	GPR123	ENST00000607359	human	ensembl	74_37	+1	putative	missense	c.1781	p.R594K	0.021	NULL	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	-	no_errors	GPR123	HGNC	ENSG00000197177	tier1	-	-	119	0	0.00	121	11	8.33
DNAH5	0	genome.wustl.edu	37	5	13727742	13727742	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	13727742	13727742	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	nonsense	c.11907	p.W3969*	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	52	0	0.00	24	31	56.36
DNAH3	0	genome.wustl.edu	37	16	21073855	21073855	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	16	21073855	21073855	G	A	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.3668	p.S1223L	0.998	pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	tier1	-	-	44	0	0.00	3	29	90.62
CPOX	0	genome.wustl.edu	37	3	98299571	98299571	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	98299571	98299571	C	T	SNP	CPOX	ENST00000264193	human	ensembl	74_37	-1	known	missense	c.1321	p.E441K	1.000	pfam_Coprogen_oxidase_aer,superfamily_Coprogen_oxidase_aer	pfam_Coprogen_oxidase_aer,superfamily_Coprogen_oxidase_aer,prints_Coprogen_oxidase_aer	-	no_errors	CPOX	HGNC	ENSG00000080819	tier1	-	-	53	0	0.00	29	3	9.09
DNAH5	0	genome.wustl.edu	37	5	13727719	13727719	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	13727719	13727719	T	-	DEL	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	frame_shift_del	c.11930	p.N3977fs	0.996	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1			58	0	0.00	30	28	48.28
NXPE2	0	genome.wustl.edu	37	11	114550437	114550437	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	114550437	114550437	A	T	SNP	NXPE2	ENST00000389586	human	ensembl	74_37	+1	known	missense	c.85	p.I29F	0.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE2	HGNC	ENSG00000204361	tier1	-	-	60	0	0.00	12	15	55.56
SLC5A11	0	genome.wustl.edu	37	16	24909327	24909327	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	16	24909327	24909327	C	A	SNP	SLC5A11	ENST00000347898	human	ensembl	74_37	+1	known	missense	c.903	p.N301K	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A11	HGNC	ENSG00000158865	tier1	-	-	50	0	0.00	37	14	27.45
AFF3	0	genome.wustl.edu	37	2	100209926	100209926	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	100209926	100209926	C	G	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	missense	c.2272	p.D758H	0.997	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218	tier1	-	-	72	0	0.00	59	20	25.32
THSD7B	0	genome.wustl.edu	37	2	138378229	138378229	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	138378229	138378229	C	T	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	silent	c.3741	p.C1247	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	rs200261966	-	80	0	0.00	38	24	38.71
MTG2	0	genome.wustl.edu	37	20	60774287	60774287	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	20	60774287	60774287	A	G	SNP	MTG2	ENST00000370823	human	ensembl	74_37	+1	known	missense	c.800	p.H267R	0.995	pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,pirsf_GTP-bd_Obg/CgtA,tigrfam_GTP-bd_Obg/CgtA,tigrfam_Small_GTP-bd_dom	pfam_GTP1_OBG_dom,pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GTP1_OBG_dom,pirsf_GTP-bd_Obg/CgtA,prints_GTP_binding_domain,tigrfam_GTP-bd_Obg/CgtA,tigrfam_Small_GTP-bd_dom	-	no_errors	MTG2	HGNC	ENSG00000101181	tier1	-	-	64	0	0.00	40	17	29.31
ITPR2	0	genome.wustl.edu	37	12	26784883	26784883	+	Silent	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	26784883	26784883	G	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	silent	c.2850	p.I950	0.001	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	93	0	0.00	49	76	60.32
DSCAM	0	genome.wustl.edu	37	21	41725408	41725408	+	Silent	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	21	41725408	41725408	G	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.918	p.G306	0.981	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587	tier1	-	-	52	0	0.00	22	4	15.38
SMPDL3B	0	genome.wustl.edu	37	1	28282224	28282224	+	Silent	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	28282224	28282224	G	C	SNP	SMPDL3B	ENST00000373894	human	ensembl	74_37	+1	known	silent	c.720	p.G240	0.057	pfam_PEstase_dom,pirsf_ASM-like_Pdiesterase_prd	pfam_PEstase_dom,pirsf_ASM-like_Pdiesterase_prd	-	no_errors	SMPDL3B	HGNC	ENSG00000130768	tier1	-	-	41	0	0.00	33	11	25.00
PNLIPRP3	0	genome.wustl.edu	37	10	118236296	118236296	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	118236296	118236296	A	T	SNP	PNLIPRP3	ENST00000369230	human	ensembl	74_37	+1	known	missense	c.1305	p.E435D	0.997	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIPRP3	HGNC	ENSG00000203837	tier1	-	-	57	0	0.00	58	6	9.38
FCRL5	0	genome.wustl.edu	37	1	157504326	157504326	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	157504326	157504326	G	C	SNP	FCRL5	ENST00000368189	human	ensembl	74_37	-1	known	missense	c.1759	p.L587V	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL5	HGNC	ENSG00000143297	tier1	-	-	27	0	0.00	30	8	21.05
EP400NL	0	genome.wustl.edu	37	12	132588667	132588667	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	132588667	132588667	C	T	SNP	EP400NL	ENST00000376625	human	ensembl	74_37	+1	known	silent	c.102	p.S34	0.990	NULL	NULL	-	no_errors	EP400NL	HGNC	ENSG00000185684	tier1	-	-	82	0	0.00	93	13	12.26
ATP9B	0	genome.wustl.edu	37	18	76967012	76967012	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	18	76967012	76967012	G	C	SNP	ATP9B	ENST00000426216	human	ensembl	74_37	+1	known	missense	c.1030	p.G344R	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9B	HGNC	ENSG00000166377	tier1	-	-	102	0	0.00	275	79	22.32
ATP1A4	0	genome.wustl.edu	37	1	160124877	160124877	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	160124877	160124877	G	A	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	missense	c.250	p.G84R	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A4	HGNC	ENSG00000132681	tier1	-	-	92	0	0.00	194	43	18.14
F11R	0	genome.wustl.edu	37	1	160970505	160970505	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	160970505	160970505	C	T	SNP	F11R	ENST00000368026	human	ensembl	74_37	-1	known	missense	c.304	p.E102K	0.990	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	F11R	HGNC	ENSG00000158769	tier1	-	-	48	0	0.00	47	62	56.88
OBP2A	0	genome.wustl.edu	37	9	138441743	138441743	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	9	138441743	138441743	C	T	SNP	OBP2A	ENST00000340780	human	ensembl	74_37	+1	known	silent	c.640	p.L214	0.235	NULL	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_von_Ebner_gland	-	no_errors	OBP2A	HGNC	ENSG00000122136	tier1	-	-	166	0	0.00	126	32	20.25
WNT2B	0	genome.wustl.edu	37	1	113057415	113057415	+	RNA	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	113057415	113057415	G	T	SNP	WNT2B	ENST00000478360	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WNT2B	HGNC	ENSG00000134245	tier1	-	-	52	0	0.00	45	4	8.16
CROCCP2	0	genome.wustl.edu	37	1	16945227	16945227	+	RNA	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	16945227	16945227	G	T	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	tier1	rs9728628	-	13	0	0.00	11	8	42.11
CAB39	0	genome.wustl.edu	37	2	231678816	231678816	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	231678816	231678816	G	T	SNP	CAB39	ENST00000258418	human	ensembl	74_37	+1	known	missense	c.680	p.R227I	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39	HGNC	ENSG00000135932	tier1	-	-	67	0	0.00	29	6	17.14
ENSG00000228835	0	genome.wustl.edu	37	18	30352058	30352065	+	Frame_Shift_Del	DEL	CGCCGGCC	CGCCGGCC	-			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	CGCCGGCC	CGCCGGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	18	30352058	30352065	CGCCGGCC	-	DEL	ENSG00000228835	ENST00000426194	human	ensembl	74_37	+1	novel	frame_shift_del	c.355_362	p.A122fs	0.135:0.030:0.026:0.027:0.006:0.007:0.005:0.004	NULL	NULL	-	no_errors	AC012123.1	Clone_based_vega_gene	ENSG00000228835	tier1			NA	NA	NA	NA	NA	NA
BPIFB4	0	genome.wustl.edu	37	20	31690812	31690812	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	20	31690812	31690812	A	T	SNP	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	missense	c.1672	p.N558Y	1.000	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191	tier1	-	-	102	1	0.97	98	23	19.01
EPHB1	0	genome.wustl.edu	37	3	134884887	134884887	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	134884887	134884887	T	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.1663	p.S555A	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	140	0	0.00	45	33	42.31
EP300	0	genome.wustl.edu	37	22	41573178	41573178	+	Silent	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	22	41573178	41573178	A	G	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	silent	c.5463	p.R1821	0.956	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	tier1	-	-	60	0	0.00	33	5	13.16
SLC44A1	0	genome.wustl.edu	37	9	108123581	108123581	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	9	108123581	108123581	C	T	SNP	SLC44A1	ENST00000374720	human	ensembl	74_37	+1	known	silent	c.870	p.L290	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A1	HGNC	ENSG00000070214	tier1	-	-	189	1	0.53	136	38	21.71
STAG2	0	genome.wustl.edu	37	X	123197048	123197048	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	X	123197048	123197048	T	C	SNP	STAG2	ENST00000218089	human	ensembl	74_37	+1	known	missense	c.1814	p.L605S	1.000	superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG2	HGNC	ENSG00000101972	tier1	-	-	23	0	0.00	14	4	21.05
DOCK8	0	genome.wustl.edu	37	9	396912	396912	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	9	396912	396912	C	A	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.3098	p.A1033D	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	-	-	56	0	0.00	40	27	39.71
KRTAP4-8	0	genome.wustl.edu	37	17	39254149	39254149	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	17	39254149	39254149	G	C	SNP	KRTAP4-8	ENST00000333822	human	ensembl	74_37	-1	known	missense	c.188	p.T63S	0.004	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-8	HGNC	ENSG00000204880	tier1	rs201246375	-	109	0	0.00	100	11	9.91
ITPR2	0	genome.wustl.edu	37	12	26784934	26784934	+	Silent	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	26784934	26784934	G	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	silent	c.2799	p.L933	0.988	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	85	0	0.00	48	83	63.36
DDX1	0	genome.wustl.edu	37	2	15769733	15769733	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	15769733	15769733	A	C	SNP	DDX1	ENST00000233084	human	ensembl	74_37	+1	known	missense	c.1883	p.Y628S	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785	tier1	-	-	31	0	0.00	13	5	27.78
ZNF215	0	genome.wustl.edu	37	11	6953570	6953570	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	6953570	6953570	G	C	SNP	ZNF215	ENST00000278319	human	ensembl	74_37	+1	known	missense	c.67	p.E23Q	0.946	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF215	HGNC	ENSG00000149054	tier1	-	-	33	0	0.00	29	4	12.12
TDRD1	0	genome.wustl.edu	37	10	115964595	115964595	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	115964595	115964595	G	A	SNP	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	missense	c.1240	p.D414N	0.138	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627	tier1	-	-	58	0	0.00	17	13	43.33
FAM49B	0	genome.wustl.edu	37	8	130866557	130866557	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	130866557	130866557	G	T	SNP	FAM49B	ENST00000401979	human	ensembl	74_37	-1	known	missense	c.471	p.S157R	1.000	pfam_DUF1394	pfam_DUF1394	-	no_errors	FAM49B	HGNC	ENSG00000153310	tier1	-	-	57	0	0.00	45	4	8.16
IRS4	0	genome.wustl.edu	37	X	107979563	107979563	+	Silent	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	X	107979563	107979563	G	A	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	silent	c.12	p.C4	0.881	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	tier1	-	-	56	0	0.00	14	19	57.58
PRKDC	0	genome.wustl.edu	37	8	48733396	48733396	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	48733396	48733396	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	nonsense	c.9217	p.Q3073*	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	84	0	0.00	51	17	25.00
LRRN3	0	genome.wustl.edu	37	7	110762970	110762970	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	7	110762970	110762970	A	G	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	missense	c.142	p.M48V	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114	tier1	-	-	46	0	0.00	39	18	31.58
HMOX2	0	genome.wustl.edu	37	16	4559676	4559676	+	Silent	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	16	4559676	4559676	G	C	SNP	HMOX2	ENST00000219700	human	ensembl	74_37	+1	known	silent	c.870	p.V290	0.995	pirsf_Haem_Oase	pfam_Haem_Oase-like,superfamily_Haem_Oase-like_multi-hlx,pirsf_Haem_Oase,prints_Haem_Oase	-	no_errors	HMOX2	HGNC	ENSG00000103415	tier1	-	-	48	0	0.00	15	76	82.61
CUBN	0	genome.wustl.edu	37	10	16870803	16870803	+	Splice_Site	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	16870803	16870803	C	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	splice_site	c.10764+1	e66+1	1.000	-	-	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	49	0	0.00	15	20	57.14
P2RY4	0	genome.wustl.edu	37	X	69479070	69479070	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	X	69479070	69479070	C	T	SNP	P2RY4	ENST00000374519	human	ensembl	74_37	-1	known	silent	c.405	p.L135	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y4_rcpt,prints_GPCR_Rhodpsn,prints_P2Y2_rcpt	-	no_errors	P2RY4	HGNC	ENSG00000186912	tier1	-	-	35	0	0.00	18	12	40.00
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
PBX1	0	genome.wustl.edu	37	1	164761887	164761887	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	164761887	164761887	C	T	SNP	PBX1	ENST00000420696	human	ensembl	74_37	+1	known	missense	c.422	p.S141L	0.999	pfam_PBX	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX1	HGNC	ENSG00000185630	tier1	-	-	61	0	0.00	56	6	9.68
PRLR	0	genome.wustl.edu	37	5	35066042	35066042	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	35066042	35066042	G	T	SNP	PRLR	ENST00000382002	human	ensembl	74_37	-1	known	missense	c.1018	p.P340T	0.864	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PRLR	HGNC	ENSG00000113494	tier1	-	-	84	0	0.00	124	51	29.14
RP1	0	genome.wustl.edu	37	8	55541922	55541922	+	Nonsense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	55541922	55541922	C	G	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	nonsense	c.5480	p.S1827*	0.993	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	tier1	-	-	32	0	0.00	24	7	22.58
PAPOLG	0	genome.wustl.edu	37	2	61020798	61020798	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	61020798	61020798	G	C	SNP	PAPOLG	ENST00000238714	human	ensembl	74_37	+1	known	missense	c.1716	p.K572N	1.000	pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLG	HGNC	ENSG00000115421	tier1	-	-	117	0	0.00	91	15	14.15
F11R	0	genome.wustl.edu	37	1	160970420	160970420	+	Splice_Site	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	160970420	160970420	C	A	SNP	F11R	ENST00000368026	human	ensembl	74_37	-1	known	splice_site	c.388+1	e4+1	1.000	-	-	-	no_errors	F11R	HGNC	ENSG00000158769	tier1	-	-	50	0	0.00	56	132	70.21
KCNH3	0	genome.wustl.edu	37	12	49944060	49944060	+	Silent	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	49944060	49944060	C	G	SNP	KCNH3	ENST00000257981	human	ensembl	74_37	+1	known	silent	c.1866	p.V622	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519	tier1	-	-	59	0	0.00	32	26	44.83
GRIP1	0	genome.wustl.edu	37	12	66856716	66856716	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	66856716	66856716	C	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	missense	c.1030	p.G344W	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974	tier1	-	-	88	0	0.00	190	51	21.16
CSMD1	0	genome.wustl.edu	37	8	3245123	3245123	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	3245123	3245123	C	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.2678	p.R893T	0.353	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	54	0	0.00	51	12	19.05
OR10G8	0	genome.wustl.edu	37	11	123900411	123900411	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	123900411	123900411	G	A	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	missense	c.82	p.V28I	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560	tier1	rs202220125	-	126	0	0.00	70	10	12.50
HOXB7	0	genome.wustl.edu	37	17	46685168	46685168	+	RNA	SNP	T	T	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	17	46685168	46685168	T	C	SNP	HOXB7	ENST00000567101	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HOXB7	HGNC	ENSG00000260027	tier1	-	-	26	0	0.00	20	13	39.39
ERMN	0	genome.wustl.edu	37	2	158178133	158178133	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	158178133	158178133	C	A	SNP	ERMN	ENST00000397283	human	ensembl	74_37	-1	known	missense	c.544	p.D182Y	0.001	NULL	superfamily_Moesin_tail	-	no_errors	ERMN	HGNC	ENSG00000136541	tier1	-	-	86	0	0.00	34	17	33.33
OR10A7	0	genome.wustl.edu	37	12	55615732	55615732	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	55615732	55615732	A	T	SNP	OR10A7	ENST00000326258	human	ensembl	74_37	+1	known	missense	c.924	p.K308N	0.002	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A7	HGNC	ENSG00000179919	tier1	-	-	18	0	0.00	18	7	28.00
ETS1	0	genome.wustl.edu	37	11	128354952	128354952	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	128354952	128354952	G	T	SNP	ETS1	ENST00000392668	human	ensembl	74_37	-1	known	missense	c.628	p.H210N	1.000	pirsf_Transform_prot_C-ets	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pirsf_Transform_prot_C-ets,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETS1	HGNC	ENSG00000134954	tier1	-	-	50	0	0.00	11	3	21.43
PLEKHA8P1	0	genome.wustl.edu	37	12	45567096	45567096	+	RNA	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	45567096	45567096	C	G	SNP	PLEKHA8P1	ENST00000256692	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	PLEKHA8P1	HGNC	ENSG00000134297	tier1	-	-	103	1	0.96	62	21	25.30
LRRC8E	0	genome.wustl.edu	37	19	7963872	7963872	+	Silent	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	7963872	7963872	G	A	SNP	LRRC8E	ENST00000306708	human	ensembl	74_37	+1	known	silent	c.465	p.K155	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8E	HGNC	ENSG00000171017	tier1	-	-	62	0	0.00	47	21	30.88
ITPR2	0	genome.wustl.edu	37	12	26780989	26780989	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	26780989	26780989	G	A	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.3041	p.S1014F	0.916	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	43	0	0.00	19	33	63.46
EML1	0	genome.wustl.edu	37	14	100402591	100402591	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	14	100402591	100402591	C	G	SNP	EML1	ENST00000334192	human	ensembl	74_37	+1	known	missense	c.2072	p.S691C	1.000	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629	tier1	-	-	67	0	0.00	115	27	19.01
TARSL2	0	genome.wustl.edu	37	15	102211786	102211786	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	15	102211786	102211786	C	G	SNP	TARSL2	ENST00000335968	human	ensembl	74_37	-1	known	missense	c.1870	p.D624H	1.000	pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARSL2	HGNC	ENSG00000185418	tier1	-	-	51	0	0.00	45	10	18.18
PROS1	0	genome.wustl.edu	37	3	93605266	93605266	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	93605266	93605266	G	T	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	missense	c.1237	p.L413I	0.999	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	PROS1	HGNC	ENSG00000184500	tier1	-	-	56	0	0.00	28	14	33.33
CRYGS	0	genome.wustl.edu	37	3	186256495	186256495	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	186256495	186256495	A	G	SNP	CRYGS	ENST00000307944	human	ensembl	74_37	-1	known	missense	c.527	p.I176T	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYGS	HGNC	ENSG00000213139	tier1	-	-	76	0	0.00	32	17	34.69
LOC101927806	0	genome.wustl.edu	37	1	17198860	17198860	+	RNA	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	17198860	17198860	C	T	SNP	LOC101927806	ENST00000438002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	U1	RFAM	ENSG00000228549	tier1	rs142643362	-	24	0	0.00	17	8	32.00
CPAMD8	0	genome.wustl.edu	37	19	17086945	17086945	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	17086945	17086945	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.1916	p.S639L	0.971	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	-	-	34	0	0.00	33	16	32.65
CCDC181	0	genome.wustl.edu	37	1	169366506	169366506	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	169366506	169366506	C	G	SNP	CCDC181	ENST00000367806	human	ensembl	74_37	-1	known	missense	c.1339	p.G447R	0.885	NULL	NULL	-	no_errors	CCDC181	HGNC	ENSG00000117477	tier1	-	-	20	0	0.00	40	11	21.57
SLITRK1	0	genome.wustl.edu	37	13	84454233	84454233	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	13	84454233	84454233	C	T	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.1410	p.M470I	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1	-	-	77	0	0.00	47	16	25.40
RTP2	0	genome.wustl.edu	37	3	187416376	187416376	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	187416376	187416376	G	C	SNP	RTP2	ENST00000358241	human	ensembl	74_37	-1	known	missense	c.588	p.F196L	1.000	NULL	NULL	-	no_errors	RTP2	HGNC	ENSG00000198471	tier1	-	-	77	0	0.00	30	29	49.15
CDH22	0	genome.wustl.edu	37	20	44879759	44879759	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	20	44879759	44879759	G	A	SNP	CDH22	ENST00000372262	human	ensembl	74_37	-1	known	missense	c.175	p.R59C	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,superfamily_MFS_dom_general_subst_transpt,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH22	HGNC	ENSG00000149654	tier1	-	-	24	0	0.00	8	17	68.00
FAT1	0	genome.wustl.edu	37	4	187518235	187518235	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	4	187518235	187518235	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	nonsense	c.12459	p.C4153*	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	50	0	0.00	37	4	9.76
PRRC2B	0	genome.wustl.edu	37	9	134349905	134349905	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	9	134349905	134349905	T	G	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.2389	p.F797V	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	70	0	0.00	52	28	35.00
DYRK2	0	genome.wustl.edu	37	12	68052027	68052027	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	12	68052027	68052027	A	G	SNP	DYRK2	ENST00000344096	human	ensembl	74_37	+1	known	missense	c.1340	p.D447G	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK2	HGNC	ENSG00000127334	tier1	-	-	32	0	0.00	650	287	30.56
TMEM132E	0	genome.wustl.edu	37	17	32963185	32963185	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	17	32963185	32963185	G	A	SNP	TMEM132E	ENST00000321639	human	ensembl	74_37	+1	known	missense	c.1867	p.A623T	0.737	NULL	NULL	-	no_errors	TMEM132E	HGNC	ENSG00000181291	tier1	-	-	71	0	0.00	46	35	43.21
XIST	0	genome.wustl.edu	37	X	73071941	73071941	+	RNA	DEL	A	A	-			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	X	73071941	73071941	A	-	DEL	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.531	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1			29	0	0.00	21	3	12.50
MYO1F	0	genome.wustl.edu	37	19	8601180	8601180	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	8601180	8601180	A	T	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	missense	c.1999	p.Y667N	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347	tier1	-	-	98	0	0.00	66	50	43.10
NMNAT3	0	genome.wustl.edu	37	3	139301903	139301903	+	RNA	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	139301903	139301903	C	T	SNP	NMNAT3	ENST00000507242	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	NMNAT3	HGNC	ENSG00000163864	tier1	-	-	46	0	0.00	17	16	48.48
SV2C	0	genome.wustl.edu	37	5	75621242	75621242	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	75621242	75621242	G	A	SNP	SV2C	ENST00000502798	human	ensembl	74_37	+1	known	missense	c.2054	p.G685E	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_SV2	-	no_errors	SV2C	HGNC	ENSG00000122012	tier1	-	-	54	0	0.00	34	8	19.05
HMCN1	0	genome.wustl.edu	37	1	185902757	185902757	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	185902757	185902757	C	T	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.1629	p.I543	0.891	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	71	0	0.00	137	35	20.35
PRSS42	0	genome.wustl.edu	37	3	46874437	46874437	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	46874437	46874437	G	A	SNP	PRSS42	ENST00000429665	human	ensembl	74_37	-1	known	nonsense	c.631	p.R211*	0.001	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS42	HGNC	ENSG00000178055	tier1	-	-	109	1	0.91	49	33	40.24
MPO	0	genome.wustl.edu	37	17	56357978	56357978	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	17	56357978	56357978	C	T	SNP	MPO	ENST00000340482	human	ensembl	74_37	-1	known	missense	c.142	p.G48S	0.000	NULL	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	MPO	HGNC	ENSG00000005381	tier1	rs200249653	-	39	0	0.00	29	10	25.64
NXPE4	0	genome.wustl.edu	37	11	114453019	114453019	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	114453019	114453019	A	G	SNP	NXPE4	ENST00000375478	human	ensembl	74_37	-1	known	missense	c.821	p.L274P	0.994	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE4	HGNC	ENSG00000137634	tier1	-	-	109	0	0.00	44	4	8.33
ITPRIPL2	0	genome.wustl.edu	37	16	19126010	19126010	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	16	19126010	19126010	C	A	SNP	ITPRIPL2	ENST00000381440	human	ensembl	74_37	+1	known	missense	c.227	p.P76H	0.206	NULL	NULL	-	no_errors	ITPRIPL2	HGNC	ENSG00000205730	tier1	-	-	15	0	0.00	10	6	37.50
MUC12	0	genome.wustl.edu	37	7	100643281	100643281	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	7	100643281	100643281	C	T	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.9437	p.T3146I	0.003	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	222	0	0.00	193	20	9.39
GUSBP1	0	genome.wustl.edu	37	5	21459642	21459642	+	RNA	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	5	21459642	21459642	G	A	SNP	GUSBP1	ENST00000508973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666	tier1	-	-	145	0	0.00	94	41	30.37
CCNA1	0	genome.wustl.edu	37	13	37006164	37006164	+	RNA	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	13	37006164	37006164	G	A	SNP	CCNA1	ENST00000463403	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CCNA1	HGNC	ENSG00000133101	tier1	-	-	25	0	0.00	6	7	53.85
OR10G8	0	genome.wustl.edu	37	11	123900385	123900385	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	123900385	123900385	C	A	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	missense	c.56	p.P19Q	0.575	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560	tier1	rs149524303	-	134	0	0.00	61	10	14.08
GSDMC	0	genome.wustl.edu	37	8	130760915	130760915	+	Silent	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	8	130760915	130760915	G	A	SNP	GSDMC	ENST00000276708	human	ensembl	74_37	-1	known	silent	c.1359	p.L453	0.000	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMC	HGNC	ENSG00000147697	tier1	-	-	52	0	0.00	16	20	55.56
OLFML2B	0	genome.wustl.edu	37	1	161976156	161976156	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	1	161976156	161976156	G	C	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	missense	c.654	p.I218M	0.000	NULL	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	tier1	-	-	76	0	0.00	61	21	25.61
KLF13	0	genome.wustl.edu	37	15	31664456	31664456	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	15	31664456	31664456	G	A	SNP	KLF13	ENST00000307145	human	ensembl	74_37	+1	known	missense	c.821	p.R274H	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF13	HGNC	ENSG00000169926	tier1	-	-	26	0	0.00	5	6	54.55
EMR1	0	genome.wustl.edu	37	19	6913680	6913680	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	6913680	6913680	T	A	SNP	EMR1	ENST00000312053	human	ensembl	74_37	+1	known	missense	c.1139	p.F380Y	0.005	NULL	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	EMR1	HGNC	ENSG00000174837	tier1	-	-	42	0	0.00	34	4	10.53
ATOH1	0	genome.wustl.edu	37	4	94750585	94750585	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	4	94750585	94750585	C	T	SNP	ATOH1	ENST00000306011	human	ensembl	74_37	+1	known	missense	c.508	p.R170C	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ATOH1	HGNC	ENSG00000172238	tier1	-	-	85	0	0.00	52	11	17.46
CASC5	0	genome.wustl.edu	37	15	40907552	40907552	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	15	40907552	40907552	G	C	SNP	CASC5	ENST00000346991	human	ensembl	74_37	+1	known	missense	c.376	p.E126Q	0.983	NULL	NULL	-	no_errors	CASC5	HGNC	ENSG00000137812	tier1	-	-	89	0	0.00	48	15	23.81
CNTN6	0	genome.wustl.edu	37	3	1415693	1415693	+	Silent	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	3	1415693	1415693	C	T	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	silent	c.2031	p.A677	0.339	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	rs148069303	-	66	0	0.00	28	17	37.78
DUPD1	0	genome.wustl.edu	37	10	76797662	76797662	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	10	76797662	76797662	G	A	SNP	DUPD1	ENST00000338487	human	ensembl	74_37	-1	known	nonsense	c.595	p.Q199*	0.869	smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUPD1	HGNC	ENSG00000188716	tier1	-	-	83	0	0.00	24	10	29.41
OR5V1	0	genome.wustl.edu	37	6	29323624	29323624	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	6	29323624	29323624	C	T	SNP	OR5V1	ENST00000377154	human	ensembl	74_37	-1	known	missense	c.349	p.A117T	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5V1	HGNC	ENSG00000243729	tier1	-	-	41	0	0.00	5	22	81.48
CBLN2	0	genome.wustl.edu	37	18	70205471	70205471	+	Silent	SNP	G	G	C			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	18	70205471	70205471	G	C	SNP	CBLN2	ENST00000269503	human	ensembl	74_37	-1	known	silent	c.615	p.G205	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN2	HGNC	ENSG00000141668	tier1	-	-	38	0	0.00	8	7	46.67
MROH2A	0	genome.wustl.edu	37	2	234698542	234698542	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	2	234698542	234698542	G	-	DEL	MROH2A	ENST00000389758	human	ensembl	74_37	+1	novel	frame_shift_del	c.453	p.A152fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2A	HGNC	ENSG00000185038	tier1			58	0	0.00	18	2	10.00
OR10G8	0	genome.wustl.edu	37	11	123900382	123900382	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	123900382	123900382	C	T	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	missense	c.53	p.A18V	0.014	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560	tier1	rs73028928	-	128	0	0.00	59	8	11.94
EI24	0	genome.wustl.edu	37	11	125452254	125452254	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	11	125452254	125452254	C	G	SNP	EI24	ENST00000278903	human	ensembl	74_37	+1	known	missense	c.798	p.F266L	1.000	NULL	NULL	-	no_errors	EI24	HGNC	ENSG00000149547	tier1	-	-	159	0	0.00	121	21	14.00
KIR3DL1	0	genome.wustl.edu	37	19	55331443	55331443	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	19	55331443	55331443	G	A	SNP	KIR3DL1	ENST00000402254	human	ensembl	74_37	+1	known	missense	c.631	p.D211N	0.430	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL1	HGNC	ENSG00000167633	tier1	-	-	116	1	0.85	54	40	42.55
AKR1B10	0	genome.wustl.edu	37	7	134215401	134215401	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L0-01A-11D-A24N-09	TCGA-DX-A1L0-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	1c188bf5-2c99-4eb4-a774-59c75d53e643	e64c9084-028a-460d-8ebc-5587c4601ea8	7	134215401	134215401	C	G	SNP	AKR1B10	ENST00000359579	human	ensembl	74_37	+1	known	missense	c.73	p.L25V	0.192	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1B10	HGNC	ENSG00000198074	tier1	-	-	73	0	0.00	31	19	38.00
