Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
GIGYF1	0	genome.wustl.edu	37	7	100283916	100283916	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	100283916	100283916	G	C	SNP	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	missense	c.835	p.R279G	0.206	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830	tier1	-	-	25	0	0.00	34	19	35.85
CLEC4M	0	genome.wustl.edu	37	19	7828315	7828315	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	7828315	7828315	C	A	SNP	CLEC4M	ENST00000327325	human	ensembl	74_37	+1	known	missense	c.83	p.P28Q	0.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4M	HGNC	ENSG00000104938	tier1	-	-	17	0	0.00	27	7	20.59
CACNA1F	0	genome.wustl.edu	37	X	49083120	49083120	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	X	49083120	49083120	G	A	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.1354	p.R452C	0.375	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	39	0	0.00	35	21	37.50
ZDHHC23	0	genome.wustl.edu	37	3	113680306	113680306	+	RNA	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	113680306	113680306	G	C	SNP	ZDHHC23	ENST00000488129	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	ZDHHC23	HGNC	ENSG00000184307	tier1	-	-	49	0	0.00	61	9	12.86
C22orf42	0	genome.wustl.edu	37	22	32550298	32550298	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	22	32550298	32550298	G	A	SNP	C22orf42	ENST00000382097	human	ensembl	74_37	-1	known	silent	c.240	p.D80	0.000	NULL	NULL	-	no_errors	C22orf42	HGNC	ENSG00000205856	tier1	-	-	36	0	0.00	14	6	30.00
CHRM4	0	genome.wustl.edu	37	11	46407064	46407064	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	46407064	46407064	C	G	SNP	CHRM4	ENST00000433765	human	ensembl	74_37	-1	known	missense	c.1044	p.Q348H	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M4_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_M4_rcpt	-	no_errors	CHRM4	HGNC	ENSG00000180720	tier1	-	-	84	0	0.00	35	29	44.62
OR4N4	0	genome.wustl.edu	37	15	22382584	22382584	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	22382584	22382584	A	T	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.112	p.I38F	0.992	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706	tier1	-	-	254	0	0.00	297	27	8.33
TXNDC9	0	genome.wustl.edu	37	2	99944045	99944045	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	99944045	99944045	C	T	SNP	TXNDC9	ENST00000264255	human	ensembl	74_37	-1	known	silent	c.261	p.K87	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC9	HGNC	ENSG00000115514	tier1	-	-	65	0	0.00	57	11	16.18
PHEX	0	genome.wustl.edu	37	X	22231040	22231040	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	X	22231040	22231040	C	T	SNP	PHEX	ENST00000379374	human	ensembl	74_37	+1	known	silent	c.1665	p.L555	0.988	pfam_Peptidase_M13_C,prints_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	PHEX	HGNC	ENSG00000102174	tier1	-	-	18	0	0.00	7	25	78.12
MAN2A1	0	genome.wustl.edu	37	5	109110495	109110495	+	Silent	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	109110495	109110495	G	T	SNP	MAN2A1	ENST00000261483	human	ensembl	74_37	+1	known	silent	c.1203	p.R401	0.008	pfam_Glyco_hydro_38_N,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2A1	HGNC	ENSG00000112893	tier1	-	-	51	0	0.00	27	5	15.62
ADARB2-AS1	0	genome.wustl.edu	37	10	1577844	1577844	+	RNA	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	10	1577844	1577844	G	C	SNP	ADARB2-AS1	ENST00000381301	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ADARB2-AS1	HGNC	ENSG00000205696	tier1	-	-	53	0	0.00	29	16	34.78
C3orf79	0	genome.wustl.edu	37	3	153203846	153203846	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	153203846	153203846	C	T	SNP	C3orf79	ENST00000446603	human	ensembl	74_37	+1	known	missense	c.175	p.P59S	0.001	NULL	NULL	-	no_errors	C3orf79	HGNC	ENSG00000237787	tier1	-	-	39	0	0.00	28	11	28.21
MTTP	0	genome.wustl.edu	37	4	100521752	100521752	+	Silent	SNP	T	T	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	100521752	100521752	T	G	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	silent	c.1098	p.A366	0.999	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823	tier1	-	-	64	0	0.00	59	19	24.36
ZNF726	0	genome.wustl.edu	37	19	24115259	24115259	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	24115259	24115259	G	A	SNP	ZNF726	ENST00000322487	human	ensembl	74_37	+1	known	missense	c.341	p.R114K	0.003	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF726	HGNC	ENSG00000213967	tier1	-	-	30	0	0.00	39	10	20.41
USP24	0	genome.wustl.edu	37	1	55534764	55534764	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	55534764	55534764	A	G	SNP	USP24	ENST00000407756	human	ensembl	74_37	-1	known	missense	c.7337	p.M2446T	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	-	no_errors	USP24	HGNC	ENSG00000162402	tier1	-	-	27	0	0.00	25	4	13.79
C9orf84	0	genome.wustl.edu	37	9	114521079	114521079	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	9	114521079	114521079	G	C	SNP	C9orf84	ENST00000318737	human	ensembl	74_37	-1	known	missense	c.300	p.H100Q	0.010	NULL	superfamily_RuvA_2-like	-	no_errors	C9orf84	HGNC	ENSG00000165181	tier1	-	-	40	0	0.00	39	8	17.02
WDR46	0	genome.wustl.edu	37	6	33248252	33248252	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	33248252	33248252	T	G	SNP	WDR46	ENST00000374617	human	ensembl	74_37	-1	known	missense	c.1477	p.S493R	1.000	pfam_BING4_C_dom	pfam_BING4_C_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR46	HGNC	ENSG00000227057	tier1	-	-	92	0	0.00	71	17	19.10
HOXB1	0	genome.wustl.edu	37	17	46607840	46607840	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	46607840	46607840	G	C	SNP	HOXB1	ENST00000239174	human	ensembl	74_37	-1	known	missense	c.427	p.P143A	0.043	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB1	HGNC	ENSG00000120094	tier1	-	-	76	0	0.00	70	43	37.39
ANXA10	0	genome.wustl.edu	37	4	169083688	169083688	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	169083688	169083688	G	T	SNP	ANXA10	ENST00000359299	human	ensembl	74_37	+1	known	missense	c.205	p.G69W	0.104	pfam_Annexin_repeat,smart_Annexin_repeat	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinX	-	no_errors	ANXA10	HGNC	ENSG00000109511	tier1	-	-	60	0	0.00	54	12	18.18
PTPRB	0	genome.wustl.edu	37	12	70988329	70988329	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	12	70988329	70988329	C	T	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	silent	c.1434	p.L478	0.994	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	59	0	0.00	63	13	17.11
ADARB2	0	genome.wustl.edu	37	10	1246213	1246213	+	Silent	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	10	1246213	1246213	T	A	SNP	ADARB2	ENST00000381310	human	ensembl	74_37	-1	known	silent	c.84	p.G28	0.000	smart_A_deamin	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	-	no_errors	ADARB2	HGNC	ENSG00000185736	tier1	-	-	65	0	0.00	27	13	32.50
FRMD4B	0	genome.wustl.edu	37	3	69351552	69351552	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	69351552	69351552	C	T	SNP	FRMD4B	ENST00000398540	human	ensembl	74_37	-1	known	missense	c.358	p.V120I	1.000	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_DUF3338,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4B	HGNC	ENSG00000114541	tier1	-	-	95	0	0.00	32	35	52.24
GPRC5C	0	genome.wustl.edu	37	17	72436058	72436058	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	72436058	72436058	C	T	SNP	GPRC5C	ENST00000392627	human	ensembl	74_37	+1	known	missense	c.278	p.A93V	0.941	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5C	HGNC	ENSG00000170412	tier1	-	-	28	0	0.00	44	6	12.00
EEF1DP3	0	genome.wustl.edu	37	13	32520168	32520168	+	RNA	SNP	T	T	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	13	32520168	32520168	T	G	SNP	EEF1DP3	ENST00000428783	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	EEF1DP3	HGNC	ENSG00000229715	tier1	-	-	45	0	0.00	28	15	34.88
SP3	0	genome.wustl.edu	37	2	174819714	174819715	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	174819714	174819715	-	T	INS	SP3	ENST00000310015	human	ensembl	74_37	-1	known	frame_shift_ins	c.1526_1525	p.T509fs	1.000:1.000	NULL	pfam_Znf_C2H2,superfamily_Galactose-bd-like,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP3	HGNC	ENSG00000172845	tier1			58	0	0.00	38	14	26.92
SDHA	0	genome.wustl.edu	37	5	251510	251510	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	251510	251510	G	C	SNP	SDHA	ENST00000264932	human	ensembl	74_37	+1	known	missense	c.1721	p.C574S	0.992	pfam_Fum_Rdtase/Succ_DH_flav-like_C,superfamily_Fum_Rdtase/Succ_DH_flav-like_C,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	pfam_FAD_bind_dom,pfam_Fum_Rdtase/Succ_DH_flav-like_C,superfamily_Succ_DH/fumarate_Rdtase_cat,superfamily_Fum_Rdtase/Succ_DH_flav-like_C,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	-	no_errors	SDHA	HGNC	ENSG00000073578	tier1	-	-	65	0	0.00	88	57	39.31
OTP	0	genome.wustl.edu	37	5	76932914	76932914	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	76932914	76932914	C	G	SNP	OTP	ENST00000306422	human	ensembl	74_37	-1	known	missense	c.179	p.G60A	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	OTP	HGNC	ENSG00000171540	tier1	-	-	88	0	0.00	61	19	23.75
NR2E1	0	genome.wustl.edu	37	6	108499369	108499369	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	108499369	108499369	C	G	SNP	NR2E1	ENST00000368986	human	ensembl	74_37	+1	known	missense	c.566	p.A189G	0.997	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	NR2E1	HGNC	ENSG00000112333	tier1	-	-	79	0	0.00	64	15	18.75
KIAA2013	0	genome.wustl.edu	37	1	11983413	11983413	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	11983413	11983413	C	G	SNP	KIAA2013	ENST00000376576	human	ensembl	74_37	-1	known	missense	c.1167	p.Q389H	1.000	pfam_DUF2152	pfam_DUF2152	-	no_errors	KIAA2013	HGNC	ENSG00000116685	tier1	-	-	98	0	0.00	87	13	13.00
OR11H1	0	genome.wustl.edu	37	22	16449006	16449006	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	22	16449006	16449006	A	T	SNP	OR11H1	ENST00000252835	human	ensembl	74_37	-1	known	missense	c.799	p.Y267N	0.915	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H1	HGNC	ENSG00000130538	tier1	-	-	48	0	0.00	40	13	24.53
AKAP12	0	genome.wustl.edu	37	6	151672827	151672827	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	151672827	151672827	G	T	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	missense	c.3301	p.A1101S	0.000	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016	tier1	-	-	22	0	0.00	19	11	36.67
ARC	0	genome.wustl.edu	37	8	143693468	143693468	+	Splice_Site	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	143693468	143693468	C	A	SNP	ARC	ENST00000356613	human	ensembl	74_37	-1	known	splice_site	c.1191+1	e1+1	1.000	-	-	-	no_errors	ARC	HGNC	ENSG00000198576	tier1	-	-	111	0	0.00	115	28	19.58
NPTXR	0	genome.wustl.edu	37	22	39218630	39218630	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	22	39218630	39218630	C	T	SNP	NPTXR	ENST00000333039	human	ensembl	74_37	-1	known	missense	c.1487	p.G496E	0.998	NULL	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTXR	HGNC	ENSG00000221890	tier1	-	-	26	0	0.00	43	11	20.37
NMNAT2	0	genome.wustl.edu	37	1	183273820	183273820	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	183273820	183273820	A	C	SNP	NMNAT2	ENST00000294868	human	ensembl	74_37	-1	known	missense	c.55	p.F19V	0.002	NULL	pfam_Cyt_trans-like	-	no_errors	NMNAT2	HGNC	ENSG00000157064	tier1	-	-	36	0	0.00	23	19	45.24
CHST1	0	genome.wustl.edu	37	11	45670491	45670491	+	RNA	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	45670491	45670491	G	T	SNP	CHST1	ENST00000533673	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHST1	HGNC	ENSG00000175264	tier1	-	-	27	0	0.00	22	4	15.38
TBX21	0	genome.wustl.edu	37	17	45821866	45821866	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	45821866	45821866	G	T	SNP	TBX21	ENST00000177694	human	ensembl	74_37	+1	known	missense	c.946	p.D316Y	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX21	HGNC	ENSG00000073861	tier1	-	-	46	0	0.00	33	10	23.26
CRISP3	0	genome.wustl.edu	37	6	49703228	49703228	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	49703228	49703228	T	A	SNP	CRISP3	ENST00000433368	human	ensembl	74_37	-1	known	missense	c.335	p.D112V	0.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_CAP_domain,pfam_Cysteine_rich_secretory,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	CRISP3	HGNC	ENSG00000096006	tier1	-	-	87	0	0.00	89	9	9.00
NPY4R	0	genome.wustl.edu	37	10	47087186	47087186	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	10	47087186	47087186	G	A	SNP	NPY4R	ENST00000374312	human	ensembl	74_37	+1	known	missense	c.403	p.V135M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY4_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPY4R	HGNC	ENSG00000204174	tier1	rs144429123	-	96	0	0.00	56	12	17.65
TAGLN2	0	genome.wustl.edu	37	1	159889571	159889572	+	In_Frame_Ins	INS	-	-	TAA			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	159889571	159889572	-	TAA	INS	TAGLN2	ENST00000368096	human	ensembl	74_37	-1	known	in_frame_ins	c.298_297	p.99in_frame_insL	1.000:1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_Calponin_repeat,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin	-	no_errors	TAGLN2	HGNC	ENSG00000158710	tier1			26	0	0.00	90	19	17.43
STARD9	0	genome.wustl.edu	37	15	42983936	42983936	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	42983936	42983936	C	A	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	nonsense	c.10160	p.S3387*	0.000	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	35	0	0.00	54	6	10.00
LRRC37A3	0	genome.wustl.edu	37	17	62892261	62892261	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	62892261	62892261	T	A	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.1115	p.E372V	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1	-	-	198	1	0.50	240	28	10.45
NIPAL2	0	genome.wustl.edu	37	8	99205061	99205061	+	RNA	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	99205061	99205061	C	T	SNP	NIPAL2	ENST00000520545	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.081	-	-	-	no_errors	NIPAL2	HGNC	ENSG00000104361	tier1	-	-	39	0	0.00	34	10	22.73
SLIT3	0	genome.wustl.edu	37	5	168123305	168123305	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	168123305	168123305	T	A	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.3074	p.N1025I	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	74	0	0.00	76	14	15.56
ENSG00000259668	0	genome.wustl.edu	37	15	51751092	51751097	+	RNA	DEL	AGCAGC	AGCAGC	-			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	AGCAGC	AGCAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	51751092	51751097	AGCAGC	-	DEL	ENSG00000259668	ENST00000559173	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994:0.992:0.991:0.990:0.990:0.990	-	-	-	no_errors	RP11-707P17.2	Clone_based_vega_gene	ENSG00000259668	tier1			NA	NA	NA	NA	NA	NA
SLIT3	0	genome.wustl.edu	37	5	168123307	168123307	+	Silent	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	168123307	168123307	A	T	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	silent	c.3072	p.P1024	0.002	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	74	0	0.00	77	14	15.38
LOC648987	0	genome.wustl.edu	37	5	43017498	43017498	+	RNA	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	43017498	43017498	G	A	SNP	LOC648987	ENST00000314957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	CTD-2201E18.3	Clone_based_vega_gene	ENSG00000177738	tier1	-	-	45	0	0.00	27	11	28.95
PADI4	0	genome.wustl.edu	37	1	17668836	17668836	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	17668836	17668836	C	T	SNP	PADI4	ENST00000375448	human	ensembl	74_37	+1	known	missense	c.874	p.R292C	1.000	pfam_PAD_C,superfamily_Prot_Arg_deaminase_cen_dom,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI4	HGNC	ENSG00000159339	tier1	-	-	68	0	0.00	67	26	27.96
CAMTA1	0	genome.wustl.edu	37	1	7723664	7723664	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	7723664	7723664	G	A	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.1057	p.D353N	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	55	0	0.00	48	18	27.27
FRAS1	0	genome.wustl.edu	37	4	79350248	79350248	+	Splice_Site	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	79350248	79350248	G	C	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	splice_site	c.4712-1	e36-1	1.000	-	-	-	no_errors	FRAS1	HGNC	ENSG00000138759	tier1	-	-	43	0	0.00	37	15	28.85
SYNE1	0	genome.wustl.edu	37	6	152522994	152522994	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	152522994	152522994	G	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.23110	p.H7704N	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	46	0	0.00	66	6	8.22
MIR1197	0	genome.wustl.edu	37	14	101491981	101491981	+	RNA	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	14	101491981	101491981	C	T	SNP	MIR1197	ENST00000408818	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR1197	HGNC	ENSG00000221745	tier1	-	-	140	0	0.00	93	59	38.82
ENSG00000254990	0	genome.wustl.edu	37	11	111639566	111639567	+	RNA	INS	-	-	GTGTGTGT			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	111639566	111639567	-	GTGTGTGT	INS	ENSG00000254990	ENST00000529841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013:0.014	-	-	-	no_errors	RP11-108O10.2	Clone_based_vega_gene	ENSG00000254990	tier1			NA	NA	NA	NA	NA	NA
DUSP27	0	genome.wustl.edu	37	1	167096341	167096341	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	167096341	167096341	C	G	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.1973	p.P658R	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	20	0	0.00	107	19	14.96
ADAM17	0	genome.wustl.edu	37	2	9630591	9630591	+	Silent	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	9630591	9630591	A	G	SNP	ADAM17	ENST00000310823	human	ensembl	74_37	-1	known	silent	c.2190	p.F730	0.924	NULL	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM17	HGNC	ENSG00000151694	tier1	-	-	39	0	0.00	33	5	13.16
DUSP27	0	genome.wustl.edu	37	1	167096495	167096495	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	167096495	167096495	C	A	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.2127	p.N709K	0.995	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	19	0	0.00	207	37	15.16
CCDC175	0	genome.wustl.edu	37	14	59977465	59977465	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	14	59977465	59977465	C	T	SNP	CCDC175	ENST00000281581	human	ensembl	74_37	-1	known	missense	c.2204	p.R735H	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC175	HGNC	ENSG00000151838	tier1	-	-	67	0	0.00	14	28	66.67
PPOX	0	genome.wustl.edu	37	1	161140426	161140426	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	161140426	161140426	C	G	SNP	PPOX	ENST00000352210	human	ensembl	74_37	+1	known	missense	c.1115	p.S372C	0.999	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	-	no_errors	PPOX	HGNC	ENSG00000143224	tier1	-	-	84	0	0.00	421	102	19.47
UBASH3A	0	genome.wustl.edu	37	21	43833596	43833596	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	21	43833596	43833596	A	G	SNP	UBASH3A	ENST00000319294	human	ensembl	74_37	+1	known	missense	c.631	p.R211G	0.000	NULL	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,superfamily_SH3_domain,superfamily_UBA-like,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3A	HGNC	ENSG00000160185	tier1	-	-	58	0	0.00	45	16	26.23
CCR3	0	genome.wustl.edu	37	3	46307606	46307606	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	46307606	46307606	C	G	SNP	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	missense	c.1020	p.H340Q	0.001	prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625	tier1	-	-	35	0	0.00	30	10	25.00
KRTAP12-2	0	genome.wustl.edu	37	21	46086450	46086450	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	21	46086450	46086450	C	T	SNP	KRTAP12-2	ENST00000360770	human	ensembl	74_37	-1	known	silent	c.354	p.P118	0.042	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP12-2	HGNC	ENSG00000221864	tier1	-	-	51	0	0.00	32	12	27.27
ATRX	0	genome.wustl.edu	37	X	76939918	76939919	+	Frame_Shift_Ins	INS	-	-	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	X	76939918	76939919	-	C	INS	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_ins	c.830_829	p.V277fs	1.000:1.000	superfamily_Znf_FYVE_PHD	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			44	0	0.00	18	18	50.00
TUBG1	0	genome.wustl.edu	37	17	40764110	40764110	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	40764110	40764110	G	C	SNP	TUBG1	ENST00000251413	human	ensembl	74_37	+1	known	missense	c.348	p.E116D	0.993	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Gamma_tubulin,prints_Tubulin,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Gamma_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBG1	HGNC	ENSG00000131462	tier1	-	-	59	0	0.00	49	8	14.04
C3orf79	0	genome.wustl.edu	37	3	153203844	153203844	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	153203844	153203844	A	G	SNP	C3orf79	ENST00000446603	human	ensembl	74_37	+1	known	missense	c.173	p.H58R	0.001	NULL	NULL	-	no_errors	C3orf79	HGNC	ENSG00000237787	tier1	-	-	34	0	0.00	26	11	27.50
CHRNB1	0	genome.wustl.edu	37	17	7360003	7360003	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	7360003	7360003	C	T	SNP	CHRNB1	ENST00000306071	human	ensembl	74_37	+1	known	silent	c.1467	p.D489	0.607	superfamily_Neurotrans-gated_channel_TM	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB1	HGNC	ENSG00000170175	tier1	-	-	106	0	0.00	121	24	16.55
SYNE1	0	genome.wustl.edu	37	6	152485349	152485349	+	Silent	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	152485349	152485349	G	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.23739	p.V7913	1.000	pfam_Spectrin_repeat,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	66	0	0.00	71	21	22.83
KIAA2013	0	genome.wustl.edu	37	1	11983047	11983047	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	11983047	11983047	C	T	SNP	KIAA2013	ENST00000376576	human	ensembl	74_37	-1	known	silent	c.1533	p.V511	1.000	pfam_DUF2152	pfam_DUF2152	-	no_errors	KIAA2013	HGNC	ENSG00000116685	tier1	-	-	50	0	0.00	52	10	16.13
ENSG00000183154	0	genome.wustl.edu	37	8	37593892	37593892	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	37593892	37593892	T	C	SNP	ENSG00000183154	ENST00000330539	human	ensembl	74_37	-1	putative	missense	c.124	p.S42G	0.010	NULL	NULL	-	no_errors	RP11-863K10.7	Clone_based_vega_gene	ENSG00000183154	tier1	-	-	53	0	0.00	44	12	21.43
FBXW10	0	genome.wustl.edu	37	17	18653126	18653126	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	18653126	18653126	C	T	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	silent	c.762	p.P254	0.010	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931	tier1	-	-	68	0	0.00	92	20	17.86
ST18	0	genome.wustl.edu	37	8	53084940	53084940	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	53084940	53084940	T	A	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.481	p.S161C	0.730	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	61	0	0.00	71	21	22.83
TGIF2LX	0	genome.wustl.edu	37	X	89177282	89177282	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	X	89177282	89177282	C	T	SNP	TGIF2LX	ENST00000283891	human	ensembl	74_37	+1	known	silent	c.198	p.R66	0.005	pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LX	HGNC	ENSG00000153779	tier1	-	-	17	0	0.00	3	8	72.73
LUC7L	0	genome.wustl.edu	37	16	258115	258115	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	16	258115	258115	C	T	SNP	LUC7L	ENST00000293872	human	ensembl	74_37	-1	known	missense	c.328	p.E110K	1.000	pfam_Luc7-rel	pfam_Luc7-rel	-	no_errors	LUC7L	HGNC	ENSG00000007392	tier1	-	-	54	0	0.00	31	15	32.61
DUSP27	0	genome.wustl.edu	37	1	167096970	167096970	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	167096970	167096970	C	G	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.2602	p.L868V	0.994	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	36	0	0.00	164	21	11.29
RELN	0	genome.wustl.edu	37	7	103276804	103276804	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	103276804	103276804	G	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	nonsense	c.2181	p.Y727*	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	33	0	0.00	32	4	11.11
EDC4	0	genome.wustl.edu	37	16	67915420	67915420	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	16	67915420	67915420	G	T	SNP	EDC4	ENST00000358933	human	ensembl	74_37	+1	known	missense	c.2810	p.R937L	1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EDC4	HGNC	ENSG00000038358	tier1	-	-	46	0	0.00	51	13	20.31
KIF5A	0	genome.wustl.edu	37	12	57969035	57969035	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	12	57969035	57969035	T	C	SNP	KIF5A	ENST00000455537	human	ensembl	74_37	+1	known	missense	c.1885	p.C629R	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980	tier1	-	-	35	0	0.00	13	10	43.48
UBB	0	genome.wustl.edu	37	17	16285594	16285594	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	16285594	16285594	C	T	SNP	UBB	ENST00000302182	human	ensembl	74_37	+1	novel	nonsense	c.373	p.Q125*	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,prints_Ubiquitin,pfscan_Ubiquitin_supergroup	-	no_errors	UBB	HGNC	ENSG00000170315	tier1	-	-	63	0	0.00	101	37	26.62
TECTA	0	genome.wustl.edu	37	11	121028837	121028837	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	121028837	121028837	C	A	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.4593	p.F1531L	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1	-	-	35	0	0.00	23	11	32.35
GPRC5C	0	genome.wustl.edu	37	17	72435889	72435889	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	72435889	72435889	C	G	SNP	GPRC5C	ENST00000392627	human	ensembl	74_37	+1	known	missense	c.109	p.Q37E	0.976	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5C	HGNC	ENSG00000170412	tier1	-	-	66	0	0.00	95	17	15.18
NRP2	0	genome.wustl.edu	37	2	206588626	206588626	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	206588626	206588626	C	T	SNP	NRP2	ENST00000360409	human	ensembl	74_37	+1	known	missense	c.782	p.S261F	1.000	pirsf_Neuropilin,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257	tier1	-	-	95	0	0.00	60	13	17.81
LPPR2	0	genome.wustl.edu	37	19	11475026	11475026	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	11475026	11475026	C	T	SNP	LPPR2	ENST00000591608	human	ensembl	74_37	+1	known	missense	c.944	p.S315L	0.999	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	DKFZP761J1410	Uniprot_gn	ENSG00000105520	tier1	-	-	29	0	0.00	41	6	12.77
NRP2	0	genome.wustl.edu	37	2	206588625	206588625	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	206588625	206588625	T	A	SNP	NRP2	ENST00000360409	human	ensembl	74_37	+1	known	missense	c.781	p.S261T	1.000	pirsf_Neuropilin,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257	tier1	-	-	95	0	0.00	58	13	18.31
KPTN	0	genome.wustl.edu	37	19	47978546	47978546	+	RNA	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	47978546	47978546	G	C	SNP	KPTN	ENST00000600551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	KPTN	HGNC	ENSG00000118162	tier1	-	-	34	0	0.00	61	11	15.28
TMEM63C	0	genome.wustl.edu	37	14	77697934	77697934	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	14	77697934	77697934	C	T	SNP	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	silent	c.354	p.D118	0.760	NULL	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548	tier1	rs201147786	GMAF=0	46	0	0.00	38	9	18.75
MAN1C1	0	genome.wustl.edu	37	1	26098237	26098237	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	26098237	26098237	A	G	SNP	MAN1C1	ENST00000374332	human	ensembl	74_37	+1	known	missense	c.1231	p.K411E	0.994	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1C1	HGNC	ENSG00000117643	tier1	-	-	39	0	0.00	39	14	26.42
ENSG00000233002	0	genome.wustl.edu	37	17	15639142	15639142	+	RNA	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	15639142	15639142	G	A	SNP	ENSG00000233002	ENST00000434017	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	AC005324.6	Clone_based_vega_gene	ENSG00000233002	tier1	rs199625653	-	9	0	0.00	6	7	53.85
PMPCB	0	genome.wustl.edu	37	7	102949431	102949431	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	102949431	102949431	G	A	SNP	PMPCB	ENST00000249269	human	ensembl	74_37	+1	known	silent	c.882	p.A294	0.984	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	PMPCB	HGNC	ENSG00000105819	tier1	rs76757936	GMAF=0.0005	46	0	0.00	48	23	32.39
ADAM17	0	genome.wustl.edu	37	2	9675993	9675993	+	Silent	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	9675993	9675993	G	T	SNP	ADAM17	ENST00000310823	human	ensembl	74_37	-1	known	silent	c.420	p.I140	1.000	pfam_Peptidase_M12B_N	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM17	HGNC	ENSG00000151694	tier1	-	-	75	0	0.00	18	11	37.93
PRTG	0	genome.wustl.edu	37	15	55919246	55919246	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	55919246	55919246	G	T	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	missense	c.2887	p.L963I	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	70	0	0.00	36	32	47.06
ZNF704	0	genome.wustl.edu	37	8	81577130	81577130	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	81577130	81577130	T	A	SNP	ZNF704	ENST00000327835	human	ensembl	74_37	-1	known	missense	c.847	p.T283S	0.999	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF704	HGNC	ENSG00000164684	tier1	-	-	100	0	0.00	114	18	13.64
GRK5	0	genome.wustl.edu	37	10	121086078	121086078	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	10	121086078	121086078	A	C	SNP	GRK5	ENST00000392870	human	ensembl	74_37	+1	known	missense	c.103	p.K35Q	1.000	superfamily_Regulat_G_prot_signal_superfam	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK5	HGNC	ENSG00000198873	tier1	-	-	45	0	0.00	43	4	8.51
SCN4A	0	genome.wustl.edu	37	17	62025311	62025311	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	62025311	62025311	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.3257	p.A1086V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	78	0	0.00	89	14	13.59
DOK2	0	genome.wustl.edu	37	8	21767194	21767194	+	Silent	SNP	A	A	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	21767194	21767194	A	G	SNP	DOK2	ENST00000276420	human	ensembl	74_37	-1	known	silent	c.867	p.A289	0.000	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	DOK2	HGNC	ENSG00000147443	tier1	-	-	104	1	0.95	63	20	24.10
NBPF10	0	genome.wustl.edu	37	1	145368496	145368496	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	145368496	145368496	G	C	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.10474	p.D3492H	0.012	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	238	0	0.00	759	82	9.74
XYLB	0	genome.wustl.edu	37	3	38411731	38411732	+	RNA	INS	-	-	CACACACACA			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	3	38411731	38411732	-	CACACACACA	INS	XYLB	ENST00000487569	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	XYLB	HGNC	ENSG00000093217	tier1			NA	NA	NA	NA	NA	NA
NKAIN4	0	genome.wustl.edu	37	20	61872719	61872719	+	RNA	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	20	61872719	61872719	G	T	SNP	NKAIN4	ENST00000466885	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NKAIN4	HGNC	ENSG00000101198	tier1	-	-	66	0	0.00	65	17	20.73
MYH14	0	genome.wustl.edu	37	19	50792733	50792733	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	50792733	50792733	C	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.4793	p.A1598E	1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357	tier1	-	-	50	0	0.00	43	6	12.24
SCAND3	0	genome.wustl.edu	37	6	28541205	28541205	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	28541205	28541205	G	A	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.2461	p.R821W	0.984	NULL	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	rs199908707	GMAF=0.0005	53	0	0.00	62	12	16.22
MTMR4	0	genome.wustl.edu	37	17	56573691	56573691	+	Silent	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	56573691	56573691	T	C	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	silent	c.1812	p.R604	0.998	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389	tier1	-	-	30	0	0.00	41	4	8.89
NBPF10	0	genome.wustl.edu	37	1	145368529	145368529	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	145368529	145368529	G	C	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.10507	p.E3503Q	0.004	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	260	0	0.00	935	104	10.01
UNC13A	0	genome.wustl.edu	37	19	17768952	17768952	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	17768952	17768952	C	T	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.950	p.R317H	0.981	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477	tier1	-	-	87	0	0.00	95	30	24.00
ERI1	0	genome.wustl.edu	37	8	8873857	8873857	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	8873857	8873857	G	T	SNP	ERI1	ENST00000250263	human	ensembl	74_37	+1	known	missense	c.524	p.R175I	0.998	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_SAP_dom,superfamily_RNaseH-like_dom,smart_SAP_dom,smart_Exonuclease,pfscan_SAP_dom	-	no_errors	ERI1	HGNC	ENSG00000104626	tier1	-	-	39	0	0.00	40	4	9.09
STARD9	0	genome.wustl.edu	37	15	42985565	42985565	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	42985565	42985565	G	T	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	missense	c.11789	p.G3930V	0.000	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	33	0	0.00	38	4	9.52
CDKL5	0	genome.wustl.edu	37	X	18668605	18668605	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	X	18668605	18668605	T	A	SNP	CDKL5	ENST00000379989	human	ensembl	74_37	+1	known	missense	c.2873	p.I958N	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL5	HGNC	ENSG00000008086	tier1	-	-	42	0	0.00	38	14	26.42
MIR129-1	0	genome.wustl.edu	37	7	127847943	127847943	+	RNA	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	127847943	127847943	G	C	SNP	MIR129-1	ENST00000384972	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR129-1	HGNC	ENSG00000207705	tier1	-	-	41	0	0.00	21	5	19.23
DPP9	0	genome.wustl.edu	37	19	4694694	4694694	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	4694694	4694694	C	G	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	missense	c.1495	p.E499Q	0.123	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP9	HGNC	ENSG00000142002	tier1	-	-	53	0	0.00	80	9	10.11
PNPLA6	0	genome.wustl.edu	37	19	7619446	7619446	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	7619446	7619446	A	C	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	missense	c.2501	p.Q834P	0.997	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	tier1	-	-	50	0	0.00	76	15	16.48
FSTL5	0	genome.wustl.edu	37	4	162307283	162307283	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	162307283	162307283	G	A	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	silent	c.2160	p.Y720	0.962	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	38	0	0.00	18	15	45.45
ADAMTS3	0	genome.wustl.edu	37	4	73280608	73280608	+	Silent	SNP	T	T	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	73280608	73280608	T	G	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	silent	c.585	p.G195	1.000	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140	tier1	-	-	91	0	0.00	80	15	15.79
PREX2	0	genome.wustl.edu	37	8	69032459	69032459	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	8	69032459	69032459	G	A	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.3533	p.G1178E	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	33	0	0.00	34	11	24.44
TUBA3C	0	genome.wustl.edu	37	13	19751171	19751171	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	13	19751171	19751171	A	T	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	missense	c.952	p.L318M	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	-	-	135	0	0.00	129	30	18.87
DUSP27	0	genome.wustl.edu	37	1	167096832	167096832	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	167096832	167096832	C	G	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.2464	p.P822A	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	26	0	0.00	176	27	13.30
PCDHB6	0	genome.wustl.edu	37	5	140530374	140530374	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	140530374	140530374	T	C	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.536	p.V179A	0.006	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	tier1	-	-	35	0	0.00	21	5	19.23
TDRD6	0	genome.wustl.edu	37	6	46656482	46656482	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	46656482	46656482	G	A	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.617	p.R206H	0.960	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113	tier1	-	-	39	0	0.00	38	13	25.49
INF2	0	genome.wustl.edu	37	14	105177455	105177455	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	14	105177455	105177455	A	C	SNP	INF2	ENST00000392634	human	ensembl	74_37	+1	known	missense	c.2350	p.T784P	0.997	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485	tier1	-	-	27	0	0.00	20	17	45.95
IFI6	0	genome.wustl.edu	37	1	27995782	27995782	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	27995782	27995782	A	C	SNP	IFI6	ENST00000339145	human	ensembl	74_37	-1	known	missense	c.44	p.L15R	0.003	NULL	pfam_IFI6/IFI27	-	no_errors	IFI6	HGNC	ENSG00000126709	tier1	-	-	110	0	0.00	96	19	16.38
TMPRSS5	0	genome.wustl.edu	37	11	113560630	113560630	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	113560630	113560630	C	T	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	missense	c.1216	p.G406R	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	tier1	-	-	36	0	0.00	20	13	39.39
EXOC6B	0	genome.wustl.edu	37	2	72411239	72411239	+	Silent	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	72411239	72411239	C	G	SNP	EXOC6B	ENST00000272427	human	ensembl	74_37	-1	known	silent	c.2274	p.R758	0.622	pfam_Sec15,pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036	tier1	-	-	54	0	0.00	33	14	29.79
PCYOX1	0	genome.wustl.edu	37	2	70504006	70504006	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	70504006	70504006	G	T	SNP	PCYOX1	ENST00000433351	human	ensembl	74_37	+1	known	nonsense	c.1000	p.E334*	1.000	pfam_Prenylcys_lyase,pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Amino_oxidase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1	HGNC	ENSG00000116005	tier1	rs200244897	-	54	0	0.00	33	11	25.00
PCLO	0	genome.wustl.edu	37	7	82545805	82545805	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	82545805	82545805	A	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.11497	p.Y3833N	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	62	0	0.00	82	16	16.33
NBPF10	0	genome.wustl.edu	37	1	145368500	145368500	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	145368500	145368500	G	T	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.10478	p.R3493I	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	241	0	0.00	787	86	9.85
GUSB	0	genome.wustl.edu	37	7	65439619	65439619	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	7	65439619	65439619	C	T	SNP	GUSB	ENST00000304895	human	ensembl	74_37	-1	known	missense	c.1138	p.A380T	0.941	pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_2	pfam_Glyco_hydro_2_TIM,pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_Ig-like,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like,prints_Glyco_hydro_2	-	no_errors	GUSB	HGNC	ENSG00000169919	tier1	-	-	39	0	0.00	58	13	18.06
PRMT8	0	genome.wustl.edu	37	12	3678670	3678670	+	Silent	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	12	3678670	3678670	C	A	SNP	PRMT8	ENST00000382622	human	ensembl	74_37	+1	known	silent	c.652	p.R218	1.000	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218	tier1	-	-	68	0	0.00	47	15	24.19
LOC440905	0	genome.wustl.edu	37	2	130748075	130748075	+	RNA	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	2	130748075	130748075	G	T	SNP	LOC440905	ENST00000440931	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.512	-	-	-	no_errors	AC018865.8	Clone_based_vega_gene	ENSG00000180178	tier1	-	-	44	0	0.00	20	11	35.48
SETD3	0	genome.wustl.edu	37	14	99865106	99865106	+	Silent	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	14	99865106	99865106	G	T	SNP	SETD3	ENST00000331768	human	ensembl	74_37	-1	known	silent	c.1695	p.S565	0.000	NULL	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,superfamily_Rubisco_LSMT_subst-bd	-	no_errors	SETD3	HGNC	ENSG00000183576	tier1	-	-	59	0	0.00	35	4	10.00
SYNRG	0	genome.wustl.edu	37	17	35902452	35902452	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	35902452	35902452	T	C	SNP	SYNRG	ENST00000339208	human	ensembl	74_37	-1	known	missense	c.2824	p.T942A	0.945	NULL	smart_EPS15_homology,pfscan_EPS15_homology	-	no_errors	SYNRG	HGNC	ENSG00000006114	tier1	-	-	69	0	0.00	76	15	16.48
LOR	0	genome.wustl.edu	37	1	153233488	153233489	+	In_Frame_Ins	INS	-	-	GGCGGT			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	153233488	153233489	-	GGCGGT	INS	LOR	ENST00000368742	human	ensembl	74_37	+1	known	in_frame_ins	c.63_64	p.25in_frame_insGG	0.924:0.986	NULL	NULL	-	no_errors	LOR	HGNC	ENSG00000203782	tier1			NA	NA	NA	NA	NA	NA
TDO2	0	genome.wustl.edu	37	4	156835543	156835543	+	Silent	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	4	156835543	156835543	G	C	SNP	TDO2	ENST00000536354	human	ensembl	74_37	+1	known	silent	c.795	p.L265	0.428	pfam_Trp_2_3_dOase	pfam_Trp_2_3_dOase	-	no_errors	TDO2	HGNC	ENSG00000151790	tier1	-	-	46	0	0.00	24	18	42.86
LOC100288842	0	genome.wustl.edu	37	9	123560880	123560880	+	RNA	SNP	C	C	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	9	123560880	123560880	C	A	SNP	LOC100288842	ENST00000437707	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-27I1.4	Clone_based_vega_gene	ENSG00000214654	tier1	-	-	48	0	0.00	37	9	19.57
NLRP4	0	genome.wustl.edu	37	19	56369480	56369480	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	56369480	56369480	A	C	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	missense	c.721	p.N241H	0.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	tier1	-	-	66	0	0.00	106	20	15.87
BLVRB	0	genome.wustl.edu	37	19	40953796	40953796	+	Nonstop_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	40953796	40953796	C	G	SNP	BLVRB	ENST00000263368	human	ensembl	74_37	-1	known	nonstop	c.621	p.*207Y	0.967	NULL	pfam_NmrA,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	BLVRB	HGNC	ENSG00000090013	tier1	-	-	46	0	0.00	64	8	11.11
SYNM	0	genome.wustl.edu	37	15	99674046	99674047	+	RNA	INS	-	-	TTCTGTTATAGCCTAAG			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	99674046	99674047	-	TTCTGTTATAGCCTAAG	INS	SYNM	ENST00000558420	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	SYNM	HGNC	ENSG00000182253	tier1			NA	NA	NA	NA	NA	NA
MEGF6	0	genome.wustl.edu	37	1	3412562	3412562	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	3412562	3412562	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.3763	p.G1255S	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	175	0	0.00	142	51	26.42
PKLR	0	genome.wustl.edu	37	1	155265486	155265486	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	155265486	155265486	C	T	SNP	PKLR	ENST00000342741	human	ensembl	74_37	-1	known	silent	c.345	p.A115	0.915	pfam_Pyrv_Knase_brl,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,tigrfam_Pyr_Knase	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKLR	HGNC	ENSG00000143627	tier1	-	-	47	0	0.00	37	11	22.92
F10	0	genome.wustl.edu	37	13	113803498	113803498	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	13	113803498	113803498	G	A	SNP	F10	ENST00000375559	human	ensembl	74_37	+1	known	silent	c.1134	p.K378	1.000	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Peptidase_S1,prints_Peptidase_S1A,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	F10	HGNC	ENSG00000126218	tier1	-	-	45	0	0.00	29	21	42.00
PCDHA1	0	genome.wustl.edu	37	5	140166038	140166038	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	140166038	140166038	G	T	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	nonsense	c.163	p.E55*	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	tier1	-	-	66	0	0.00	72	23	24.21
SHANK1	0	genome.wustl.edu	37	19	51219979	51219979	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	51219979	51219979	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	silent	c.198	p.D66	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	43	0	0.00	42	7	14.29
KIAA2013	0	genome.wustl.edu	37	1	11982747	11982747	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	11982747	11982747	C	G	SNP	KIAA2013	ENST00000376576	human	ensembl	74_37	-1	known	missense	c.1833	p.K611N	1.000	pfam_DUF2152	pfam_DUF2152	-	no_errors	KIAA2013	HGNC	ENSG00000116685	tier1	-	-	59	0	0.00	47	9	16.07
GAPT	0	genome.wustl.edu	37	5	57790369	57790369	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	57790369	57790369	G	A	SNP	GAPT	ENST00000318469	human	ensembl	74_37	+1	known	silent	c.6	p.S2	0.006	pfam_Protein_GAPT	pfam_Protein_GAPT	-	no_errors	GAPT	HGNC	ENSG00000175857	tier1	rs201851075	GMAF=0.0005	79	0	0.00	56	31	35.63
NUTM2D	0	genome.wustl.edu	37	10	89127109	89127109	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	10	89127109	89127109	C	G	SNP	NUTM2D	ENST00000412718	human	ensembl	74_37	+1	novel	missense	c.1654	p.P552A	0.147	NULL	NULL	-	no_errors	NUTM2D	HGNC	ENSG00000214562	tier1	-	-	148	0	0.00	94	30	24.19
TRPC7	0	genome.wustl.edu	37	5	135692859	135692859	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	135692859	135692859	A	T	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.217	p.C73S	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	tier1	-	-	39	0	0.00	54	6	10.00
MGA	0	genome.wustl.edu	37	15	41988903	41988903	+	Silent	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	15	41988903	41988903	A	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	silent	c.1695	p.I565	0.000	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	tier1	-	-	15	0	0.00	23	5	17.86
ZZEF1	0	genome.wustl.edu	37	17	4027291	4027291	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	4027291	4027291	A	C	SNP	ZZEF1	ENST00000381638	human	ensembl	74_37	-1	known	missense	c.409	p.L137V	0.944	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_EF_hand_dom,smart_Znf_ZZ,pfscan_EF_hand_dom,pfscan_Znf_ZZ	-	no_errors	ZZEF1	HGNC	ENSG00000074755	tier1	-	-	82	0	0.00	110	17	13.39
MED17	0	genome.wustl.edu	37	11	93529663	93529663	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	93529663	93529663	A	T	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	missense	c.1100	p.H367L	1.000	pfam_Mediator_Med17	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429	tier1	-	-	64	0	0.00	54	16	22.86
MYH4	0	genome.wustl.edu	37	17	10346789	10346789	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	10346789	10346789	T	C	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.5723	p.E1908G	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	99	0	0.00	112	33	22.76
IBTK	0	genome.wustl.edu	37	6	82911138	82911138	+	Splice_Site	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	82911138	82911138	C	T	SNP	IBTK	ENST00000306270	human	ensembl	74_37	-1	known	splice_site	c.2790+1	e18+1	1.000	-	-	-	no_errors	IBTK	HGNC	ENSG00000005700	tier1	-	-	22	0	0.00	12	6	33.33
IFNL2	0	genome.wustl.edu	37	19	39759837	39759837	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	39759837	39759837	T	A	SNP	IFNL2	ENST00000331982	human	ensembl	74_37	+1	known	missense	c.238	p.F80I	0.849	NULL	NULL	-	no_errors	IFNL2	HGNC	ENSG00000183709	tier1	-	-	41	0	0.00	56	11	16.42
KIAA1919	0	genome.wustl.edu	37	6	111587418	111587418	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	111587418	111587418	C	G	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	missense	c.653	p.A218G	0.069	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	tier1	-	-	73	0	0.00	55	10	15.38
RYR1	0	genome.wustl.edu	37	19	38990310	38990310	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	38990310	38990310	C	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.7063	p.R2355W	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	rs193922803	-	37	0	0.00	23	27	52.94
RASAL1	0	genome.wustl.edu	37	12	113539812	113539812	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	12	113539812	113539812	C	T	SNP	RASAL1	ENST00000546530	human	ensembl	74_37	-1	known	missense	c.2110	p.A704T	0.004	pfam_Znf_Btk_motif,smart_Znf_Btk_motif,pfscan_Znf_Btk_motif	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASAL1	HGNC	ENSG00000111344	tier1	rs200091326	-	65	0	0.00	69	16	18.82
TXLNB	0	genome.wustl.edu	37	6	139564104	139564104	+	Silent	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	6	139564104	139564104	G	C	SNP	TXLNB	ENST00000358430	human	ensembl	74_37	-1	known	silent	c.1614	p.L538	0.000	NULL	pfam_Taxilin_fam	-	no_errors	TXLNB	HGNC	ENSG00000164440	tier1	-	-	46	0	0.00	51	11	17.74
PLEKHA7	0	genome.wustl.edu	37	11	16810669	16810669	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	11	16810669	16810669	G	A	SNP	PLEKHA7	ENST00000448080	human	ensembl	74_37	-1	known	missense	c.3334	p.R1112W	1.000	NULL	pfam_Pleckstrin_homology,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA7	HGNC	ENSG00000166689	tier1	-	-	22	0	0.00	18	4	17.39
CDH26	0	genome.wustl.edu	37	20	58571109	58571109	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	20	58571109	58571109	G	A	SNP	CDH26	ENST00000244047	human	ensembl	74_37	+1	known	missense	c.1888	p.V630M	0.992	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1	-	-	76	0	0.00	106	16	13.11
SYT6	0	genome.wustl.edu	37	1	114641799	114641799	+	Silent	SNP	G	G	C			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	114641799	114641799	G	C	SNP	SYT6	ENST00000393296	human	ensembl	74_37	-1	known	silent	c.1281	p.V427	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT6	HGNC	ENSG00000134207	tier1	-	-	183	0	0.00	143	30	17.34
HIGD1B	0	genome.wustl.edu	37	17	42926715	42926715	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	42926715	42926715	G	A	SNP	HIGD1B	ENST00000253410	human	ensembl	74_37	+1	known	missense	c.194	p.R65Q	1.000	pfam_Hypoxia_induced_domain	pfam_Hypoxia_induced_domain	-	no_errors	HIGD1B	HGNC	ENSG00000131097	tier1	-	-	60	0	0.00	68	16	19.05
MARCH6	0	genome.wustl.edu	37	5	10403604	10403604	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	5	10403604	10403604	G	A	SNP	MARCH6	ENST00000274140	human	ensembl	74_37	+1	known	missense	c.1283	p.G428E	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH6	HGNC	ENSG00000145495	tier1	-	-	45	0	0.00	106	31	22.63
TBX2	0	genome.wustl.edu	37	17	59477918	59477918	+	Silent	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	17	59477918	59477918	C	T	SNP	TBX2	ENST00000419047	human	ensembl	74_37	+1	known	silent	c.381	p.I127	0.999	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,pfscan_TF_T-box	-	no_errors	TBX2	HGNC	ENSG00000121068	tier1	-	-	28	0	0.00	76	9	10.59
YY1AP1	0	genome.wustl.edu	37	1	155658167	155658167	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	155658167	155658167	C	G	SNP	YY1AP1	ENST00000368339	human	ensembl	74_37	-1	known	missense	c.89	p.S30T	0.997	NULL	NULL	-	no_errors	YY1AP1	HGNC	ENSG00000163374	tier1	-	-	42	0	0.00	76	27	26.21
TRMT1	0	genome.wustl.edu	37	19	13218410	13218410	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	19	13218410	13218410	G	A	SNP	TRMT1	ENST00000357720	human	ensembl	74_37	-1	known	missense	c.1561	p.R521C	1.000	NULL	pfam_TRM1,pfam_Znf_CCCH,pfam_tRNA_Trfase_Trm5/Tyw2,smart_Znf_CCCH,tigrfam_TRM1	-	no_errors	TRMT1	HGNC	ENSG00000104907	tier1	-	-	48	0	0.00	64	9	12.16
JPH2	0	genome.wustl.edu	37	20	42788548	42788548	+	Silent	SNP	G	G	A			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	20	42788548	42788548	G	A	SNP	JPH2	ENST00000372980	human	ensembl	74_37	-1	known	silent	c.879	p.G293	1.000	pfam_MORN,smart_MORN,pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH2	HGNC	ENSG00000149596	tier1	-	-	40	0	0.00	51	15	22.73
KIAA2013	0	genome.wustl.edu	37	1	11983547	11983547	+	Splice_Site	SNP	C	C	T			TCGA-DX-A1L2-01A-22D-A24N-09	TCGA-DX-A1L2-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4c59fb2d-21b6-4b09-8174-6102de736e4d	bab2414e-d20b-4b79-ae79-1223a627736e	1	11983547	11983547	C	T	SNP	KIAA2013	ENST00000376576	human	ensembl	74_37	-1	known	splice_site	c.1034-1	e2-1	1.000	-	-	-	no_errors	KIAA2013	HGNC	ENSG00000116685	tier1	-	-	82	0	0.00	67	20	22.99
