Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
UHRF1	0	genome.wustl.edu	37	19	4932853	4932853	+	RNA	SNP	A	A	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	4932853	4932853	A	C	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	83	0	0.00	64	167	72.29
WRN	0	genome.wustl.edu	37	8	30999277	30999277	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	8	30999277	30999277	G	T	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	missense	c.3219	p.K1073N	0.000	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	40	0	0.00	41	4	8.89
CFTR	0	genome.wustl.edu	37	7	117188766	117188766	+	Silent	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	7	117188766	117188766	C	T	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	silent	c.1281	p.S427	0.424	superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,pfscan_ABC_transporter-like,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	105	0	0.00	75	9	10.71
HERC1	0	genome.wustl.edu	37	15	63952050	63952050	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	15	63952050	63952050	T	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.9309	p.L3103F	0.998	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	76	0	0.00	46	15	24.59
PDZD2	0	genome.wustl.edu	37	5	32088673	32088673	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	5	32088673	32088673	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.5119	p.E1707K	0.034	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	33	0	0.00	55	47	46.08
PROCA1	0	genome.wustl.edu	37	17	27031194	27031194	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	17	27031194	27031194	G	C	SNP	PROCA1	ENST00000439862	human	ensembl	74_37	-1	known	missense	c.399	p.I133M	0.996	superfamily_PLipase_A2_dom	pfam_PLipase_A2,superfamily_PLipase_A2_dom	-	no_errors	PROCA1	HGNC	ENSG00000167525	tier1	-	-	39	0	0.00	24	4	14.29
MMP3	0	genome.wustl.edu	37	11	102712894	102712894	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	11	102712894	102712894	C	-	DEL	MMP3	ENST00000299855	human	ensembl	74_37	-1	known	frame_shift_del	c.616	p.D206fs	0.219	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP3	HGNC	ENSG00000149968	tier1			52	0	0.00	34	14	29.17
RTP3	0	genome.wustl.edu	37	3	46539582	46539582	+	Silent	SNP	A	A	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	46539582	46539582	A	G	SNP	RTP3	ENST00000296142	human	ensembl	74_37	+1	known	silent	c.30	p.Q10	0.000	NULL	NULL	-	no_errors	RTP3	HGNC	ENSG00000163825	tier1	-	-	17	0	0.00	11	4	26.67
SCN9A	0	genome.wustl.edu	37	2	167136889	167136889	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	167136889	167136889	T	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.2324	p.N775I	0.718	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	113	0	0.00	64	12	15.79
IFNA17	0	genome.wustl.edu	37	9	21227659	21227659	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	9	21227659	21227659	T	C	SNP	IFNA17	ENST00000413767	human	ensembl	74_37	-1	known	missense	c.514	p.M172V	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA17	HGNC	ENSG00000234829	tier1	-	-	102	0	0.00	50	19	27.54
MIR620	0	genome.wustl.edu	37	12	116586415	116586416	+	RNA	DEL	TA	TA	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	116586415	116586416	TA	-	DEL	MIR620	ENST00000385232	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR620	HGNC	ENSG00000207967	tier1			15	0	0.00	22	5	18.52
ZDHHC11B	0	genome.wustl.edu	37	5	711036	711037	+	RNA	INS	-	-	GA			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	5	711036	711037	-	GA	INS	ZDHHC11B	ENST00000522356	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1			14	0	0.00	23	9	28.12
TMEM182	0	genome.wustl.edu	37	2	103414356	103414356	+	Silent	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	103414356	103414356	G	A	SNP	TMEM182	ENST00000412401	human	ensembl	74_37	+1	known	silent	c.366	p.L122	0.998	NULL	NULL	-	no_errors	TMEM182	HGNC	ENSG00000170417	tier1	-	-	48	0	0.00	38	15	28.30
IFNLR1	0	genome.wustl.edu	37	1	24484158	24484158	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	24484158	24484158	G	A	SNP	IFNLR1	ENST00000327535	human	ensembl	74_37	-1	known	missense	c.1025	p.P342L	0.914	NULL	superfamily_Fibronectin_type3	-	no_errors	IFNLR1	HGNC	ENSG00000185436	tier1	-	-	65	0	0.00	54	17	23.94
METTL21B	0	genome.wustl.edu	37	12	58168434	58168434	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	58168434	58168434	G	T	SNP	METTL21B	ENST00000333012	human	ensembl	74_37	+1	known	missense	c.312	p.E104D	0.000	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL21B	HGNC	ENSG00000123427	tier1	-	-	38	0	0.00	462	145	23.89
IL7R	0	genome.wustl.edu	37	5	35873642	35873642	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	5	35873642	35873642	A	G	SNP	IL7R	ENST00000303115	human	ensembl	74_37	+1	known	missense	c.598	p.M200V	0.804	pfam_Fibronectin_type3,superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3	-	no_errors	IL7R	HGNC	ENSG00000168685	tier1	-	-	34	0	0.00	23	10	30.30
BNC1	0	genome.wustl.edu	37	15	83932020	83932020	+	Silent	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	15	83932020	83932020	C	T	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	silent	c.1983	p.G661	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	48	0	0.00	32	17	34.00
LOC100286922	0	genome.wustl.edu	37	2	234663718	234663718	+	RNA	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	234663718	234663718	G	A	SNP	LOC100286922	ENST00000389816	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC114812.5	Clone_based_vega_gene	ENSG00000178836	tier1	-	-	88	0	0.00	39	12	23.53
MTMR11	0	genome.wustl.edu	37	1	149900986	149900986	+	RNA	DEL	A	A	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	149900986	149900986	A	-	DEL	MTMR11	ENST00000466496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTMR11	HGNC	ENSG00000014914	tier1			41	0	0.00	34	5	12.82
TRAM1	0	genome.wustl.edu	37	8	71520527	71520527	+	RNA	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	8	71520527	71520527	C	T	SNP	TRAM1	ENST00000520700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	TRAM1	HGNC	ENSG00000067167	tier1	-	-	11	0	0.00	5	6	54.55
USP30	0	genome.wustl.edu	37	12	109511301	109511301	+	Silent	SNP	C	C	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	109511301	109511301	C	G	SNP	USP30	ENST00000257548	human	ensembl	74_37	+1	known	silent	c.684	p.L228	0.899	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP30	HGNC	ENSG00000135093	tier1	-	-	29	0	0.00	21	8	27.59
CD84	0	genome.wustl.edu	37	1	160523553	160523553	+	RNA	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	160523553	160523553	G	A	SNP	CD84	ENST00000368047	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD84	HGNC	ENSG00000066294	tier1	-	-	19	0	0.00	16	4	20.00
METTL21B	0	genome.wustl.edu	37	12	58168459	58168459	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	58168459	58168459	G	C	SNP	METTL21B	ENST00000333012	human	ensembl	74_37	+1	known	missense	c.337	p.E113Q	0.002	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL21B	HGNC	ENSG00000123427	tier1	-	-	38	0	0.00	517	177	25.47
ARID2	0	genome.wustl.edu	37	12	46124998	46124998	+	Splice_Site	SNP	A	A	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	46124998	46124998	A	G	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	splice_site	c.187-2	e3-2	1.000	-	-	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1	-	-	56	0	0.00	31	10	23.81
PDE3B	0	genome.wustl.edu	37	11	14810576	14810576	+	RNA	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	11	14810576	14810576	C	T	SNP	PDE3B	ENST00000525439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1	-	-	50	0	0.00	35	4	10.00
LRRN4	0	genome.wustl.edu	37	20	6022395	6022395	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	20	6022395	6022395	G	A	SNP	LRRN4	ENST00000378858	human	ensembl	74_37	-1	known	missense	c.1496	p.P499L	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4	HGNC	ENSG00000125872	tier1	-	-	61	0	0.00	25	18	41.86
FCRLA	0	genome.wustl.edu	37	1	161680486	161680486	+	RNA	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	161680486	161680486	C	T	SNP	FCRLA	ENST00000470841	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FCRLA	HGNC	ENSG00000132185	tier1	-	-	47	0	0.00	50	17	25.37
CABP1	0	genome.wustl.edu	37	12	121093630	121093635	+	In_Frame_Del	DEL	GTGCGT	GTGCGT	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	GTGCGT	GTGCGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	121093630	121093635	GTGCGT	-	DEL	CABP1	ENST00000453000	human	ensembl	74_37	+1	putative	in_frame_del	c.17_22	p.AC7in_frame_del	0.940:0.982:0.991:0.991:0.991:0.982	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1			NA	NA	NA	NA	NA	NA
LOC101927345	0	genome.wustl.edu	37	1	143378289	143378289	+	RNA	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	143378289	143378289	G	T	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	123	0	0.00	75	21	21.88
TUSC3	0	genome.wustl.edu	37	8	15508302	15508302	+	Silent	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	8	15508302	15508302	G	A	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	silent	c.405	p.E135	0.997	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723	tier1	-	-	152	0	0.00	66	17	20.24
OR4D10	0	genome.wustl.edu	37	11	59245419	59245419	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	11	59245419	59245419	G	A	SNP	OR4D10	ENST00000530162	human	ensembl	74_37	+1	known	missense	c.517	p.V173I	0.169	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D10	HGNC	ENSG00000254466	tier1	-	-	73	0	0.00	32	15	31.91
CARD10	0	genome.wustl.edu	37	22	37906309	37906314	+	In_Frame_Del	DEL	CTCCTT	CTCCTT	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	CTCCTT	CTCCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	22	37906309	37906314	CTCCTT	-	DEL	CARD10	ENST00000251973	human	ensembl	74_37	-1	known	in_frame_del	c.819_814	p.KE272in_frame_del	0.939:0.949:0.957:0.963:0.966:0.967	NULL	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	-	no_errors	CARD10	HGNC	ENSG00000100065	tier1			NA	NA	NA	NA	NA	NA
ITPR2	0	genome.wustl.edu	37	12	26755360	26755360	+	Silent	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	26755360	26755360	C	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	silent	c.3621	p.L1207	1.000	pfam_Ca-rel_channel,superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	21	0	0.00	15	6	28.57
ENSG00000216020	0	genome.wustl.edu	37	3	191693737	191693749	+	RNA	DEL	TCTCTCCGTGTGT	TCTCTCCGTGTGT	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	TCTCTCCGTGTGT	TCTCTCCGTGTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	191693737	191693749	TCTCTCCGTGTGT	-	DEL	ENSG00000216020	ENST00000401201	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003:0.003:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	AC026320.1	Clone_based_ensembl_gene	ENSG00000216020	tier1			NA	NA	NA	NA	NA	NA
TDRD12	0	genome.wustl.edu	37	19	33240749	33240749	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	33240749	33240749	C	A	SNP	TDRD12	ENST00000444215	human	ensembl	74_37	+1	known	missense	c.556	p.L186I	1.000	NULL	pfam_Tudor,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase	-	no_errors	TDRD12	HGNC	ENSG00000173809	tier1	-	-	21	0	0.00	22	5	18.52
CCDC30	0	genome.wustl.edu	37	1	42948563	42948563	+	RNA	DEL	A	A	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	42948563	42948563	A	-	DEL	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			15	0	0.00	13	4	23.53
MKI67	0	genome.wustl.edu	37	10	129910646	129910646	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	10	129910646	129910646	G	T	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.1720	p.Q574K	0.000	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	38	0	0.00	31	13	28.26
ZNRF4	0	genome.wustl.edu	37	19	5456046	5456046	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	5456046	5456046	G	A	SNP	ZNRF4	ENST00000222033	human	ensembl	74_37	+1	known	missense	c.544	p.A182T	0.748	pfam_Protease-assoc_domain	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF4	HGNC	ENSG00000105428	tier1	-	-	32	0	0.00	32	8	20.00
KLHL26	0	genome.wustl.edu	37	19	18779660	18779660	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	18779660	18779660	G	T	SNP	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	missense	c.1453	p.A485S	0.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487	tier1	-	-	26	0	0.00	24	4	14.29
SLTM	0	genome.wustl.edu	37	15	59192056	59192056	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	15	59192056	59192056	T	C	SNP	SLTM	ENST00000380516	human	ensembl	74_37	-1	known	missense	c.670	p.T224A	1.000	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776	tier1	-	-	18	0	0.00	9	6	40.00
APOB	0	genome.wustl.edu	37	2	21263893	21263893	+	Silent	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	21263893	21263893	T	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.300	p.K100	0.139	pfam_Lipid_transpt_N,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	52	0	0.00	24	8	25.00
FAM166B	0	genome.wustl.edu	37	9	35561913	35561920	+	RNA	DEL	CCCACCCT	CCCACCCT	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	CCCACCCT	CCCACCCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	9	35561913	35561920	CCCACCCT	-	DEL	FAM166B	ENST00000480287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.002:0.001:0.008:0.015:0.015:0.015	-	-	-	no_errors	FAM166B	HGNC	ENSG00000215187	tier1			NA	NA	NA	NA	NA	NA
SRRT	0	genome.wustl.edu	37	7	100482417	100482417	+	Silent	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	7	100482417	100482417	C	T	SNP	SRRT	ENST00000388793	human	ensembl	74_37	+1	known	silent	c.999	p.D333	0.989	NULL	pfam_Arsenite-R_2,pfam_DUF3546	-	no_errors	SRRT	HGNC	ENSG00000087087	tier1	rs201815722	GMAF=0.0005	65	0	0.00	31	17	35.42
PDZD2	0	genome.wustl.edu	37	5	32089053	32089053	+	Silent	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	5	32089053	32089053	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	silent	c.5499	p.K1833	0.074	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	31	0	0.00	11	9	42.86
SMC4	0	genome.wustl.edu	37	3	160148853	160148853	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	160148853	160148853	A	G	SNP	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	missense	c.2974	p.N992D	0.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	tier1	-	-	49	0	0.00	29	6	17.14
ENSG00000215941	0	genome.wustl.edu	37	3	38948802	38948813	+	RNA	DEL	TGTGTGTGTGTG	TGTGTGTGTGTG	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	TGTGTGTGTGTG	TGTGTGTGTGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	38948802	38948813	TGTGTGTGTGTG	-	DEL	ENSG00000215941	ENST00000401122	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.001:0.005:0.007:0.015:0.028:0.021:0.020:0.022:0.022:0.028:0.032	-	-	-	no_errors	AC116038.1	Clone_based_ensembl_gene	ENSG00000215941	tier1			NA	NA	NA	NA	NA	NA
ZNF610	0	genome.wustl.edu	37	19	52869387	52869387	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	52869387	52869387	A	C	SNP	ZNF610	ENST00000321287	human	ensembl	74_37	+1	known	missense	c.756	p.R252S	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	tier1	-	-	41	0	0.00	18	8	30.77
TMTC3	0	genome.wustl.edu	37	12	88582692	88582692	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	88582692	88582692	C	G	SNP	TMTC3	ENST00000266712	human	ensembl	74_37	+1	known	missense	c.1505	p.S502C	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_TPR_1,pfam_DUF1736,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC3	HGNC	ENSG00000139324	tier1	-	-	15	0	0.00	8	106	92.98
CHERP	0	genome.wustl.edu	37	19	16630497	16630497	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	16630497	16630497	G	T	SNP	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	missense	c.2492	p.A831E	0.968	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872	tier1	-	-	55	0	0.00	34	4	10.53
ZNF827	0	genome.wustl.edu	37	4	146700609	146700609	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	4	146700609	146700609	T	C	SNP	ZNF827	ENST00000508784	human	ensembl	74_37	-1	known	missense	c.2438	p.N813S	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF827	HGNC	ENSG00000151612	tier1	-	-	56	0	0.00	40	8	16.67
RHO	0	genome.wustl.edu	37	3	129249837	129249837	+	Silent	SNP	C	C	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	129249837	129249837	C	A	SNP	RHO	ENST00000296271	human	ensembl	74_37	+1	known	silent	c.480	p.T160	0.945	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Rhodopsin_N,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	RHO	HGNC	ENSG00000163914	tier1	rs151063543	GMAF=0.0005	54	0	0.00	31	4	11.43
CEP170P1	0	genome.wustl.edu	37	4	119475261	119475261	+	RNA	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	4	119475261	119475261	T	C	SNP	CEP170P1	ENST00000412784	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.475	-	-	-	no_errors	CEP170P1	HGNC	ENSG00000154608	tier1	-	-	29	0	0.00	16	12	42.86
PDZD2	0	genome.wustl.edu	37	5	32088856	32088856	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	5	32088856	32088856	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.5302	p.G1768R	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	92	0	0.00	69	74	51.75
MUC5B	0	genome.wustl.edu	37	11	1269472	1269549	+	In_Frame_Del	DEL	ACACCCACAGCTACCAGCTTTACAGCCATCCCCTCCTCCTCCCTGGGCACCACCTGGACCCGCCTATCACAGACCACC	ACACCCACAGCTACCAGCTTTACAGCCATCCCCTCCTCCTCCCTGGGCACCACCTGGACCCGCCTATCACAGACCACC	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	ACACCCACAGCTACCAGCTTTACAGCCATCCCCTCCTCCTCCCTGGGCACCACCTGGACCCGCCTATCACAGACCACC	ACACCCACAGCTACCAGCTTTACAGCCATCCCCTCCTCCTCCCTGGGCACCACCTGGACCCGCCTATCACAGACCACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	11	1269472	1269549	ACACCCACAGCTACCAGCTTTACAGCCATCCCCTCCTCCTCCCTGGGCACCACCTGGACCCGCCTATCACAGACCACC	-	DEL	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	in_frame_del	c.11371_11448	p.ATSFTAIPSSSLGTTWTRLSQTTTPT3794in_frame_del	0.000:0.000:0.000:0.005:0.097:0.008:0.012:0.015:0.000:0.000:0.000:0.000:0.000:0.010:0.000:0.000:0.001:0.001:0.000:0.000:0.000:0.000:0.016:0.002:0.000:0.000:0.007:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.034:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.019:0.021:0.016:0.015:0.012:0.014:0.003:0.007:0.031:0.030:0.020:0.019:0.018:0.009:0.003:0.004:0.001:0.000:0.000:0.001:0.005:0.008:0.009:0.008:0.004:0.000:0.000:0.000:0.000:0.000:0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1			NA	NA	NA	NA	NA	NA
CXorf40A	0	genome.wustl.edu	37	X	148628297	148628297	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	X	148628297	148628297	T	G	SNP	CXorf40A	ENST00000359293	human	ensembl	74_37	+1	known	missense	c.266	p.I89S	0.893	superfamily_PUA-like_domain	superfamily_PUA-like_domain	-	no_errors	CXorf40A	HGNC	ENSG00000197620	tier1	-	-	76	0	0.00	52	13	20.00
HIST2H2AB	0	genome.wustl.edu	37	1	149859187	149859187	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	149859187	149859187	G	C	SNP	HIST2H2AB	ENST00000331128	human	ensembl	74_37	-1	known	missense	c.280	p.L94V	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST2H2AB	HGNC	ENSG00000184270	tier1	-	-	54	0	0.00	43	6	12.24
AZGP1	0	genome.wustl.edu	37	7	99564889	99564893	+	Frame_Shift_Del	DEL	TGACC	TGACC	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	TGACC	TGACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	7	99564889	99564893	TGACC	-	DEL	AZGP1	ENST00000292401	human	ensembl	74_37	-1	known	frame_shift_del	c.634_630	p.V211fs	0.319:0.295:0.275:0.225:0.030	pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	AZGP1	HGNC	ENSG00000160862	tier1			NA	NA	NA	NA	NA	NA
NFASC	0	genome.wustl.edu	37	1	204945807	204945807	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	204945807	204945807	A	C	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	missense	c.1715	p.K572T	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531	tier1	-	-	64	0	0.00	46	7	13.21
LIMCH1	0	genome.wustl.edu	37	4	41664997	41664997	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	4	41664997	41664997	A	-	DEL	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	frame_shift_del	c.3287	p.K1097fs	0.994	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1			20	0	0.00	21	2	8.70
MYOCD	0	genome.wustl.edu	37	17	12666834	12666834	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	17	12666834	12666834	C	T	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	missense	c.2834	p.P945L	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1	rs139170912	-	55	0	0.00	20	18	47.37
EPB41	0	genome.wustl.edu	37	1	29365852	29365852	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	29365852	29365852	C	G	SNP	EPB41	ENST00000343067	human	ensembl	74_37	+1	known	missense	c.1550	p.T517S	1.000	pirsf_Band_41_protein,pfam_FERM-adjacent	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain	-	no_errors	EPB41	HGNC	ENSG00000159023	tier1	-	-	62	0	0.00	44	6	12.00
CUL4B	0	genome.wustl.edu	37	X	119672572	119672572	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	X	119672572	119672572	C	A	SNP	CUL4B	ENST00000404115	human	ensembl	74_37	-1	known	missense	c.1849	p.V617F	1.000	pfam_Cullin_N,superfamily_Cullin_homology,smart_Cullin_homology,pfscan_Cullin_homology	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4B	HGNC	ENSG00000158290	tier1	-	-	74	0	0.00	52	24	31.58
HR	0	genome.wustl.edu	37	8	21986391	21986391	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	8	21986391	21986391	C	T	SNP	HR	ENST00000381418	human	ensembl	74_37	-1	known	missense	c.293	p.R98H	0.988	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HR	HGNC	ENSG00000168453	tier1	-	-	64	0	0.00	44	9	16.98
CEACAM20	0	genome.wustl.edu	37	19	45029180	45029180	+	RNA	SNP	A	A	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	19	45029180	45029180	A	T	SNP	CEACAM20	ENST00000316962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CEACAM20	HGNC	ENSG00000176395	tier1	-	-	67	0	0.00	63	6	8.70
TCF7L2	0	genome.wustl.edu	37	10	114925317	114925317	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	10	114925317	114925317	A	-	DEL	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	frame_shift_del	c.1446	p.K485fs	1.000	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737	tier1			38	0	0.00	23	3	11.54
ABCC10	0	genome.wustl.edu	37	6	43403588	43403588	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	6	43403588	43403588	C	T	SNP	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	missense	c.1708	p.R570W	1.000	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574	tier1	-	-	40	0	0.00	22	6	21.43
SKIL	0	genome.wustl.edu	37	3	170078753	170078753	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	170078753	170078753	C	T	SNP	SKIL	ENST00000259119	human	ensembl	74_37	+1	known	missense	c.634	p.P212S	1.000	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKIL	HGNC	ENSG00000136603	tier1	-	-	24	0	0.00	13	6	31.58
MUC4	0	genome.wustl.edu	37	3	195509286	195509286	+	Silent	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	195509286	195509286	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.9165	p.N3055	0.001	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	168	0	0.00	110	17	13.39
KIAA1279	0	genome.wustl.edu	37	10	70748980	70748980	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	10	70748980	70748980	C	T	SNP	KIAA1279	ENST00000361983	human	ensembl	74_37	+1	known	missense	c.392	p.S131L	0.989	NULL	pfam_KBP	-	no_errors	KIAA1279	HGNC	ENSG00000198954	tier1	-	-	43	0	0.00	34	4	10.53
POU2F1	0	genome.wustl.edu	37	1	167381363	167381363	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	167381363	167381363	C	T	SNP	POU2F1	ENST00000367866	human	ensembl	74_37	+1	known	missense	c.1723	p.P575S	0.999	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190	tier1	-	-	48	0	0.00	103	15	12.71
RHCG	0	genome.wustl.edu	37	15	90020057	90020057	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	15	90020057	90020057	G	A	SNP	RHCG	ENST00000268122	human	ensembl	74_37	-1	known	missense	c.1240	p.L414F	0.000	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHCG	HGNC	ENSG00000140519	tier1	-	-	30	0	0.00	30	8	21.05
SIRPB1	0	genome.wustl.edu	37	20	1546901	1546901	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	20	1546901	1546901	G	T	SNP	SIRPB1	ENST00000381605	human	ensembl	74_37	-1	known	missense	c.1097	p.A366D	0.001	NULL	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	SIRPB1	HGNC	ENSG00000101307	tier1	-	-	25	0	0.00	13	4	23.53
LYZ	0	genome.wustl.edu	37	12	69744056	69744056	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	69744056	69744056	A	G	SNP	LYZ	ENST00000548839	human	ensembl	74_37	+1	putative	missense	c.305	p.K102R	1.000	smart_Glyco_hydro_22,prints_Glyco_hydro_22	pfam_Glyco_hydro_22,pfam_TGlycosylase-like_SLT,superfamily_Lysozyme-like_dom,smart_Glyco_hydro_22,prints_Glyco_hydro_22_lys,prints_Glyco_hydro_22	-	no_errors	LYZ	HGNC	ENSG00000090382	tier1	-	-	29	0	0.00	439	39	8.16
GIGYF1	0	genome.wustl.edu	37	7	100279600	100279600	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	7	100279600	100279600	C	T	SNP	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	missense	c.2942	p.S981N	0.960	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830	tier1	-	-	72	0	0.00	42	19	30.65
SMG7	0	genome.wustl.edu	37	1	183497112	183497112	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	183497112	183497112	G	T	SNP	SMG7	ENST00000507469	human	ensembl	74_37	+1	known	missense	c.506	p.S169I	1.000	pfam_EST1	pfam_EST1	-	no_errors	SMG7	HGNC	ENSG00000116698	tier1	-	-	26	0	0.00	19	8	29.63
IGSF22	0	genome.wustl.edu	37	11	18743396	18743397	+	RNA	INS	-	-	G			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	11	18743396	18743397	-	G	INS	IGSF22	ENST00000412229	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1			35	0	0.00	30	3	9.09
METTL21B	0	genome.wustl.edu	37	12	58168428	58168428	+	Silent	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	58168428	58168428	G	T	SNP	METTL21B	ENST00000333012	human	ensembl	74_37	+1	known	silent	c.306	p.V102	0.010	NULL	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL21B	HGNC	ENSG00000123427	tier1	-	-	37	0	0.00	451	143	24.03
NDUFB2-AS1	0	genome.wustl.edu	37	7	140395555	140395555	+	RNA	DEL	T	T	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	7	140395555	140395555	T	-	DEL	NDUFB2-AS1	ENST00000465466	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDUFB2-AS1	HGNC	ENSG00000240889	tier1			26	0	0.00	28	8	22.22
ENSG00000259859	0	genome.wustl.edu	37	16	64770704	64770705	+	RNA	INS	-	-	CCAGTGATGGTCACCT			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	16	64770704	64770705	-	CCAGTGATGGTCACCT	INS	ENSG00000259859	ENST00000564293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009:0.006	-	-	-	no_errors	RP11-439I14.2	Clone_based_vega_gene	ENSG00000259859	tier1			NA	NA	NA	NA	NA	NA
CPNE8	0	genome.wustl.edu	37	12	39124125	39124125	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	12	39124125	39124125	C	T	SNP	CPNE8	ENST00000331366	human	ensembl	74_37	-1	known	missense	c.758	p.R253K	1.000	superfamily_C2_dom,smart_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1	-	-	82	0	0.00	67	9	11.84
PRR21	0	genome.wustl.edu	37	2	240982144	240982144	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	240982144	240982144	T	-	DEL	PRR21	ENST00000408934	human	ensembl	74_37	-1	known	frame_shift_del	c.256	p.S86fs	0.000	NULL	NULL	-	no_errors	PRR21	HGNC	ENSG00000221961	tier1			15	0	0.00	7	3	30.00
MYO9A	0	genome.wustl.edu	37	15	72231260	72231260	+	Silent	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	15	72231260	72231260	G	T	SNP	MYO9A	ENST00000424560	human	ensembl	74_37	-1	known	silent	c.2311	p.R771	0.963	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933	tier1	-	-	36	0	0.00	30	4	11.76
TFDP3	0	genome.wustl.edu	37	X	132351355	132351355	+	Silent	SNP	G	G	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	X	132351355	132351355	G	A	SNP	TFDP3	ENST00000310125	human	ensembl	74_37	-1	known	silent	c.933	p.A311	0.998	pfam_Transc_factor_DP_C,pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP3	HGNC	ENSG00000183434	tier1	-	-	40	0	0.00	32	10	23.81
TTN	0	genome.wustl.edu	37	2	179476124	179476124	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	2	179476124	179476124	T	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.43128	p.E14376D	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	23	0	0.00	24	7	22.58
HEATR1	0	genome.wustl.edu	37	1	236749628	236749628	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	1	236749628	236749628	T	C	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.1840	p.T614A	0.000	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285	tier1	-	-	47	0	0.00	43	4	8.51
SI	0	genome.wustl.edu	37	3	164786611	164786611	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	3	164786611	164786611	C	T	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	missense	c.382	p.A128T	0.990	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	tier1	-	-	63	0	0.00	37	21	36.21
PRLHR	0	genome.wustl.edu	37	10	120353829	120353829	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A1L3-01A-11D-A24N-09	TCGA-DX-A1L3-10A-01D-A24N-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	18ec066e-8510-4921-9e35-45d85fb01e38	7f34c3a1-efee-47c6-bd61-502061fec7e3	10	120353829	120353829	G	T	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.928	p.P310T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973	tier1	-	-	73	0	0.00	42	10	19.23
