Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ZBTB46	0	genome.wustl.edu	37	20	62384159	62384159	+	Silent	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	20	62384159	62384159	C	T	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	silent	c.1278	p.S426	0.494	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584	tier1	-	-	60	0	0.00	75	15	16.67
OR9K2	0	genome.wustl.edu	37	12	55523587	55523587	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	55523587	55523587	T	-	DEL	OR9K2	ENST00000305377	human	ensembl	74_37	+1	known	frame_shift_del	c.35	p.L13fs	0.782	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9K2	HGNC	ENSG00000170605	tier1			50	0	0.00	42	4	8.70
AMFR	0	genome.wustl.edu	37	16	56438907	56438907	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	56438907	56438907	C	T	SNP	AMFR	ENST00000290649	human	ensembl	74_37	-1	known	missense	c.754	p.G252R	1.000	NULL	pfam_CUE,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_CUE,pfscan_CUE,pfscan_Znf_RING	-	no_errors	AMFR	HGNC	ENSG00000159461	tier1	rs187472781	GMAF=0.0005	75	0	0.00	65	91	58.33
SLC25A35	0	genome.wustl.edu	37	17	8194200	8194200	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	17	8194200	8194200	C	T	SNP	SLC25A35	ENST00000577745	human	ensembl	74_37	-1	known	missense	c.689	p.C230Y	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A35	HGNC	ENSG00000125434	tier1	-	-	54	0	0.00	98	53	35.10
RALGPS1	0	genome.wustl.edu	37	9	129796752	129796752	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	9	129796752	129796752	C	G	SNP	RALGPS1	ENST00000259351	human	ensembl	74_37	+1	known	missense	c.259	p.L87V	0.999	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_RasGRF_CDC25	-	no_errors	RALGPS1	HGNC	ENSG00000136828	tier1	-	-	61	0	0.00	83	15	15.31
DNAH14	0	genome.wustl.edu	37	1	225539569	225539569	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	225539569	225539569	A	-	DEL	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	frame_shift_del	c.11238	p.K3747fs	0.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1			11	0	0.00	15	8	34.78
DYRK4	0	genome.wustl.edu	37	12	4677210	4677210	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	4677210	4677210	C	T	SNP	DYRK4	ENST00000539701	human	ensembl	74_37	+1	known	missense	c.128	p.A43V	0.000	NULL	NULL	-	no_errors	DYRK4	HGNC	ENSG00000010219	tier1	-	-	13	0	0.00	13	4	23.53
HCAR3	0	genome.wustl.edu	37	12	123200742	123200742	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	123200742	123200742	G	A	SNP	HCAR3	ENST00000528880	human	ensembl	74_37	-1	known	silent	c.543	p.S181	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	HCAR3	HGNC	ENSG00000255398	tier1	-	-	49	0	0.00	13	27	67.50
CABP1	0	genome.wustl.edu	37	12	121093630	121093635	+	In_Frame_Del	DEL	GTGCGT	GTGCGT	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	GTGCGT	GTGCGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	121093630	121093635	GTGCGT	-	DEL	CABP1	ENST00000453000	human	ensembl	74_37	+1	putative	in_frame_del	c.17_22	p.AC7in_frame_del	0.940:0.982:0.991:0.991:0.991:0.982	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1			NA	NA	NA	NA	NA	NA
GKAP1	0	genome.wustl.edu	37	9	86354626	86354626	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	9	86354626	86354626	C	T	SNP	GKAP1	ENST00000376371	human	ensembl	74_37	-1	known	missense	c.1087	p.D363N	1.000	NULL	NULL	-	no_errors	GKAP1	HGNC	ENSG00000165113	tier1	-	-	50	0	0.00	64	8	11.11
SGK3	0	genome.wustl.edu	37	8	67753177	67753177	+	RNA	DEL	A	A	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	8	67753177	67753177	A	-	DEL	SGK3	ENST00000523260	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.034	-	-	-	no_errors	SGK3	HGNC	ENSG00000104205	tier1			17	0	0.00	19	3	13.64
AMFR	0	genome.wustl.edu	37	16	56438954	56438954	+	Splice_Site	SNP	C	C	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	56438954	56438954	C	G	SNP	AMFR	ENST00000290649	human	ensembl	74_37	-1	known	splice_site	c.708-1	e6-1	1.000	-	-	-	no_errors	AMFR	HGNC	ENSG00000159461	tier1	-	-	81	0	0.00	70	89	55.62
TBC1D4	0	genome.wustl.edu	37	13	75861109	75861109	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	13	75861109	75861109	G	A	SNP	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	missense	c.3716	p.T1239M	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111	tier1	-	-	77	0	0.00	49	7	12.50
RXFP2	0	genome.wustl.edu	37	13	32367198	32367198	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	13	32367198	32367198	A	G	SNP	RXFP2	ENST00000298386	human	ensembl	74_37	+1	known	missense	c.1759	p.K587E	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP2	HGNC	ENSG00000133105	tier1	-	-	65	0	0.00	42	4	8.70
PRKRIR	0	genome.wustl.edu	37	11	76062929	76062929	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	11	76062929	76062929	A	G	SNP	PRKRIR	ENST00000260045	human	ensembl	74_37	-1	known	missense	c.1265	p.I422T	0.993	superfamily_RNaseH-like_dom	pfam_Znf_C2CH,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	PRKRIR	HGNC	ENSG00000137492	tier1	-	-	35	0	0.00	27	9	25.00
EPB41L3	0	genome.wustl.edu	37	18	5415858	5415858	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	18	5415858	5415858	C	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.2026	p.A676T	1.000	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	-	-	34	0	0.00	29	6	17.14
CCDC134	0	genome.wustl.edu	37	22	42205909	42205909	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	22	42205909	42205909	C	T	SNP	CCDC134	ENST00000255784	human	ensembl	74_37	+1	known	missense	c.130	p.R44W	0.934	NULL	NULL	-	no_errors	CCDC134	HGNC	ENSG00000100147	tier1	-	-	37	0	0.00	46	12	20.69
GALNTL6	0	genome.wustl.edu	37	4	173734827	173734827	+	Silent	SNP	C	C	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	4	173734827	173734827	C	A	SNP	GALNTL6	ENST00000506823	human	ensembl	74_37	+1	known	silent	c.876	p.I292	0.973	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNTL6	HGNC	ENSG00000174473	tier1	-	-	23	0	0.00	23	8	25.81
NLRP4	0	genome.wustl.edu	37	19	56370443	56370443	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	19	56370443	56370443	G	T	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	missense	c.1684	p.D562Y	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	tier1	-	-	69	0	0.00	76	36	32.14
MAGI1	0	genome.wustl.edu	37	3	65479204	65479204	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	3	65479204	65479204	T	C	SNP	MAGI1	ENST00000402939	human	ensembl	74_37	-1	known	missense	c.533	p.E178G	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI1	HGNC	ENSG00000151276	tier1	-	-	51	0	0.00	63	19	23.17
HMMR	0	genome.wustl.edu	37	5	162918134	162918134	+	Silent	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	5	162918134	162918134	C	T	SNP	HMMR	ENST00000393915	human	ensembl	74_37	+1	known	silent	c.2142	p.Y714	0.032	NULL	NULL	-	no_errors	HMMR	HGNC	ENSG00000072571	tier1	-	-	61	0	0.00	111	10	8.26
SPRY3	0	genome.wustl.edu	37	X	155003566	155003566	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	X	155003566	155003566	A	T	SNP	SPRY3	ENST00000302805	human	ensembl	74_37	+1	known	missense	c.33	p.Q11H	0.998	NULL	pfam_Sprouty	-	no_errors	SPRY3	HGNC	ENSG00000168939	tier1	-	-	93	0	0.00	112	34	23.29
ENSG00000177553	0	genome.wustl.edu	37	1	11837201	11837201	+	RNA	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	11837201	11837201	G	T	SNP	ENSG00000177553	ENST00000376620	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	RP11-56N19.5	Clone_based_vega_gene	ENSG00000177553	tier1	-	-	28	0	0.00	22	4	15.38
PBX2P1	0	genome.wustl.edu	37	3	142897208	142897210	+	RNA	DEL	TTG	TTG	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	3	142897208	142897210	TTG	-	DEL	PBX2P1	ENST00000560287	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.006:0.006	-	-	-	no_errors	PBX2P1	HGNC	ENSG00000244171	tier1			8	0	0.00	5	8	61.54
RGPD4	0	genome.wustl.edu	37	2	108479404	108479404	+	Splice_Site	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	2	108479404	108479404	G	T	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	splice_site	c.2386-1	e17-1	1.000	-	-	-	no_errors	RGPD4	HGNC	ENSG00000196862	tier1	-	-	137	0	0.00	168	31	15.58
TRAF3IP2-AS1	0	genome.wustl.edu	37	6	111812290	111812291	+	RNA	INS	-	-	TGCGAAATT			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	111812290	111812291	-	TGCGAAATT	INS	TRAF3IP2-AS1	ENST00000532226	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.045:0.046	-	-	-	no_errors	TRAF3IP2-AS1	HGNC	ENSG00000231889	tier1			NA	NA	NA	NA	NA	NA
HNF1A	0	genome.wustl.edu	37	12	121416794	121416794	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	121416794	121416794	G	A	SNP	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	missense	c.223	p.D75N	1.000	pfam_HNF-1_N	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100	tier1	-	-	24	0	0.00	64	22	25.58
PARK2	0	genome.wustl.edu	37	6	162864388	162864388	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	162864388	162864388	C	T	SNP	PARK2	ENST00000366898	human	ensembl	74_37	-1	known	missense	c.125	p.R42H	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pirsf_Parkin,pfscan_Ubiquitin_supergroup,prints_Parkin,prints_Ubiquitin	pfam_Ubiquitin_dom,pfam_Znf_C6HC,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,smart_Znf_C6HC,pirsf_Parkin,pfscan_Ubiquitin_supergroup,prints_Parkin,prints_Ubiquitin	-	no_errors	PARK2	HGNC	ENSG00000185345	tier1	-	-	41	0	0.00	67	14	17.28
SULF1	0	genome.wustl.edu	37	8	70533467	70533467	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	8	70533467	70533467	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	silent	c.1575	p.L525	1.000	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	29	0	0.00	17	6	25.00
PREP	0	genome.wustl.edu	37	6	105821433	105821433	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	105821433	105821433	C	T	SNP	PREP	ENST00000369110	human	ensembl	74_37	-1	known	missense	c.406	p.G136S	1.000	pfam_Pept_S9A_N	pfam_Pept_S9A_N,pfam_Peptidase_S9,prints_Peptidase_S9A	-	no_errors	PREP	HGNC	ENSG00000085377	tier1	-	-	36	0	0.00	44	19	30.16
LINC00273	0	genome.wustl.edu	37	16	33961400	33961400	+	RNA	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	33961400	33961400	G	T	SNP	LINC00273	ENST00000539813	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LINC00273	HGNC	ENSG00000256642	tier1	rs113037697	-	17	0	0.00	16	8	33.33
ZNF518A	0	genome.wustl.edu	37	10	97923283	97923283	+	RNA	DEL	A	A	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	10	97923283	97923283	A	-	DEL	ZNF518A	ENST00000534948	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1			39	0	0.00	33	18	35.29
WBP2NL	0	genome.wustl.edu	37	22	42415314	42415314	+	Splice_Site	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	22	42415314	42415314	G	T	SNP	WBP2NL	ENST00000328823	human	ensembl	74_37	+1	known	splice_site	c.63-1	e2-1	0.999	-	-	-	no_errors	WBP2NL	HGNC	ENSG00000183066	tier1	-	-	47	0	0.00	44	4	8.33
UHRF1BP1L	0	genome.wustl.edu	37	12	100453644	100453644	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	100453644	100453644	T	G	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	missense	c.1727	p.D576A	1.000	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647	tier1	-	-	41	0	0.00	360	122	25.31
SMG1P1	0	genome.wustl.edu	37	16	22503208	22503208	+	RNA	SNP	A	A	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	22503208	22503208	A	T	SNP	SMG1P1	ENST00000431681	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.087	-	-	-	no_errors	SMG1P1	HGNC	ENSG00000237296	tier1	-	-	65	0	0.00	75	7	8.33
MUC5B	0	genome.wustl.edu	37	11	1253942	1253942	+	Silent	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	11	1253942	1253942	T	C	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.2016	p.Y672	0.726	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	rs908229	-	22	0	0.00	10	6	37.50
PRB2	0	genome.wustl.edu	37	12	11546647	11546647	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	11546647	11546647	G	T	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	missense	c.365	p.P122H	0.680	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335	tier1	-	-	179	1	0.56	147	31	17.42
AMZ1	0	genome.wustl.edu	37	7	2740235	2740235	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	7	2740235	2740235	G	A	SNP	AMZ1	ENST00000312371	human	ensembl	74_37	+1	known	silent	c.150	p.P50	0.019	NULL	pfam_Pept_M54_archaemetzincn	-	no_errors	AMZ1	HGNC	ENSG00000174945	tier1	-	-	51	0	0.00	46	15	24.59
ATRX	0	genome.wustl.edu	37	X	76937963	76937963	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	X	76937963	76937963	G	A	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	nonsense	c.2785	p.Q929*	0.205	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	22	0	0.00	12	9	42.86
FAT1	0	genome.wustl.edu	37	4	187629538	187629538	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	4	187629538	187629538	C	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.1444	p.V482F	0.970	pfam_Cadherin,superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	12	0	0.00	3	6	31.58
MUC17	0	genome.wustl.edu	37	7	100678114	100678114	+	Silent	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	7	100678114	100678114	T	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.3417	p.S1139	0.002	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	95	0	0.00	87	24	21.62
BMP1	0	genome.wustl.edu	37	8	22064428	22064428	+	Silent	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	8	22064428	22064428	C	T	SNP	BMP1	ENST00000306385	human	ensembl	74_37	+1	known	silent	c.2295	p.D765	1.000	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,prints_Peptidase_M12A,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	BMP1	HGNC	ENSG00000168487	tier1	-	-	50	0	0.00	39	10	20.41
AEBP1	0	genome.wustl.edu	37	7	44153422	44153422	+	Silent	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	7	44153422	44153422	C	T	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	silent	c.3039	p.P1013	1.000	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	38	0	0.00	46	44	48.89
NWD1	0	genome.wustl.edu	37	19	16860451	16860451	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	19	16860451	16860451	A	G	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.998	p.Q333R	0.000	superfamily_P-loop_NTPase	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	34	0	0.00	23	5	17.86
SMTN	0	genome.wustl.edu	37	22	31486830	31486830	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	22	31486830	31486830	C	T	SNP	SMTN	ENST00000347557	human	ensembl	74_37	+1	known	missense	c.902	p.S301L	0.369	NULL	pfam_Smoothelin,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963	tier1	-	-	61	0	0.00	58	31	34.83
C9orf43	0	genome.wustl.edu	37	9	116187646	116187648	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	9	116187646	116187648	GCA	-	DEL	C9orf43	ENST00000288462	human	ensembl	74_37	+1	known	in_frame_del	c.888_890	p.Q300in_frame_del	0.211:0.207:0.211	NULL	NULL	-	no_errors	C9orf43	HGNC	ENSG00000157653	tier1			28	0	0.00	44	8	15.38
REV3L	0	genome.wustl.edu	37	6	111688530	111688530	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	111688530	111688530	G	T	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	nonsense	c.6461	p.S2154*	0.085	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	52	0	0.00	83	12	12.63
PTMA	0	genome.wustl.edu	37	2	232577616	232577616	+	RNA	SNP	A	A	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	2	232577616	232577616	A	G	SNP	PTMA	ENST00000466801	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTMA	HGNC	ENSG00000187514	tier1	-	-	17	0	0.00	10	5	31.25
ENSG00000221130	0	genome.wustl.edu	37	11	88845967	88845970	+	RNA	DEL	ATAT	ATAT	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	ATAT	ATAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	11	88845967	88845970	ATAT	-	DEL	ENSG00000221130	ENST00000408203	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.024:0.026:0.027:0.034	-	-	-	no_errors	AP001482.1	Clone_based_ensembl_gene	ENSG00000221130	tier1			8	0	0.00	12	7	36.84
UTP20	0	genome.wustl.edu	37	12	101728256	101728256	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	101728256	101728256	G	A	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.3615	p.L1205	0.872	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	tier1	-	-	40	0	0.00	70	112	61.54
TOX2	0	genome.wustl.edu	37	20	42694484	42694484	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	20	42694484	42694484	C	T	SNP	TOX2	ENST00000341197	human	ensembl	74_37	+1	known	missense	c.1093	p.R365C	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX2	HGNC	ENSG00000124191	tier1	rs142650311	-	42	0	0.00	37	19	33.93
TMPRSS3	0	genome.wustl.edu	37	21	43815481	43815481	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	21	43815481	43815481	G	A	SNP	TMPRSS3	ENST00000380399	human	ensembl	74_37	-1	known	nonsense	c.298	p.R100*	0.970	NULL	pfam_Peptidase_S1,pfam_SRCR,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS3	HGNC	ENSG00000160183	tier1	-	-	30	0	0.00	45	13	22.41
HNRNPA1	0	genome.wustl.edu	37	12	54676401	54676401	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	54676401	54676401	T	A	SNP	HNRNPA1	ENST00000340913	human	ensembl	74_37	+1	known	missense	c.628	p.F210I	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA1	HGNC	ENSG00000135486	tier1	-	-	48	0	0.00	44	25	36.23
GPR56	0	genome.wustl.edu	37	16	57691386	57691386	+	Silent	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	57691386	57691386	C	T	SNP	GPR56	ENST00000379696	human	ensembl	74_37	+1	known	silent	c.1269	p.A423	0.951	pfam_GPCR_2_secretin-like,prints_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR56	HGNC	ENSG00000205336	tier1	-	-	79	0	0.00	156	25	13.81
OR2T12	0	genome.wustl.edu	37	1	248457939	248457939	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	248457939	248457939	A	C	SNP	OR2T12	ENST00000317996	human	ensembl	74_37	-1	known	missense	c.942	p.N314K	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T12	HGNC	ENSG00000177201	tier1	-	-	75	0	0.00	60	38	38.78
POTEB2	0	genome.wustl.edu	37	15	21071460	21071460	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	15	21071460	21071460	C	T	SNP	POTEB2	ENST00000454856	human	ensembl	74_37	-1	known	missense	c.151	p.D51N	0.034	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEB2	HGNC	ENSG00000230031	tier1	-	-	9	0	0.00	7	4	36.36
ACADVL	0	genome.wustl.edu	37	17	7123240	7123241	+	RNA	INS	-	-	GGGCGTGCAGGACGC			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	17	7123240	7123241	-	GGGCGTGCAGGACGC	INS	ACADVL	ENST00000577857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ACADVL	HGNC	ENSG00000072778	tier1			NA	NA	NA	NA	NA	NA
CT47B1	0	genome.wustl.edu	37	X	120009417	120009417	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	X	120009417	120009417	G	A	SNP	CT47B1	ENST00000371311	human	ensembl	74_37	-1	known	silent	c.108	p.G36	0.000	NULL	NULL	-	no_errors	CT47B1	HGNC	ENSG00000236446	tier1	-	-	34	0	0.00	11	49	81.67
PNN	0	genome.wustl.edu	37	14	39651863	39651863	+	RNA	SNP	A	A	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	14	39651863	39651863	A	C	SNP	PNN	ENST00000557680	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	PNN	HGNC	ENSG00000100941	tier1	-	-	23	0	0.00	11	13	54.17
TMEM132D	0	genome.wustl.edu	37	12	129558577	129558577	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	129558577	129558577	G	T	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.3143	p.T1048N	1.000	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	tier1	-	-	58	0	0.00	32	34	51.52
OR2M4	0	genome.wustl.edu	37	1	248402501	248402501	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	248402501	248402501	T	A	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.271	p.S91T	0.004	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180	tier1	-	-	76	0	0.00	56	45	44.55
RRN3P2	0	genome.wustl.edu	37	16	29110458	29110458	+	RNA	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	16	29110458	29110458	T	C	SNP	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472	tier1	-	-	52	0	0.00	85	9	9.57
HSPD1	0	genome.wustl.edu	37	2	198358123	198358123	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	2	198358123	198358123	T	C	SNP	HSPD1	ENST00000345042	human	ensembl	74_37	-1	known	missense	c.794	p.N265S	1.000	pfam_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,superfamily_Cpn60/TCP-1,tigrfam_Chaprnin_Cpn60	pfam_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,superfamily_Cpn60/TCP-1,prints_Chaprnin_Cpn60,prints_Chaperone_TCP-1,tigrfam_Chaprnin_Cpn60	-	no_errors	HSPD1	HGNC	ENSG00000144381	tier1	rs149003485	-	30	0	0.00	33	7	17.50
RERE	0	genome.wustl.edu	37	1	8421513	8421513	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	8421513	8421513	C	T	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.2054	p.G685E	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599	tier1	-	-	28	0	0.00	22	21	48.84
LOC101060264	0	genome.wustl.edu	37	6	41516286	41516292	+	RNA	DEL	GCCTGTA	GCCTGTA	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	GCCTGTA	GCCTGTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	41516286	41516292	GCCTGTA	-	DEL	LOC101060264	ENST00000454812	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015:0.013:0.008:0.006:0.003:0.002:0.006	-	-	-	no_errors	RP11-328M4.2	Clone_based_vega_gene	ENSG00000234753	tier1			NA	NA	NA	NA	NA	NA
SERPINA11	0	genome.wustl.edu	37	14	94909527	94909527	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	14	94909527	94909527	G	A	SNP	SERPINA11	ENST00000334708	human	ensembl	74_37	-1	known	missense	c.953	p.S318F	0.710	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA11	HGNC	ENSG00000186910	tier1	-	-	66	0	0.00	35	8	18.60
ENSG00000228463	0	genome.wustl.edu	37	1	234408	234408	+	RNA	SNP	A	A	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	1	234408	234408	A	G	SNP	ENSG00000228463	ENST00000442116	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	AP006222.2	Clone_based_vega_gene	ENSG00000228463	tier1	rs111659307	-	23	0	0.00	33	8	19.51
STARD4	0	genome.wustl.edu	37	5	110836598	110836598	+	RNA	SNP	T	T	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	5	110836598	110836598	T	G	SNP	STARD4	ENST00000510346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	STARD4	HGNC	ENSG00000164211	tier1	-	-	14	0	0.00	15	8	34.78
UHRF1BP1L	0	genome.wustl.edu	37	12	100451839	100451839	+	Silent	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	100451839	100451839	T	C	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	silent	c.3216	p.P1072	0.841	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647	tier1	-	-	27	0	0.00	55	107	66.05
DNAI2	0	genome.wustl.edu	37	17	72308191	72308191	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	17	72308191	72308191	G	A	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	missense	c.1544	p.R515Q	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595	tier1	-	-	24	0	0.00	24	7	22.58
ATP8B3	0	genome.wustl.edu	37	19	1799764	1799764	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	19	1799764	1799764	A	-	DEL	ATP8B3	ENST00000526092	human	ensembl	74_37	-1	putative	frame_shift_del	c.1575	p.F525fs	0.016	NULL	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			12	0	0.00	7	4	36.36
UTP20	0	genome.wustl.edu	37	12	101715333	101715333	+	Silent	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	12	101715333	101715333	G	A	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.2967	p.V989	0.997	pfam_DRIM,superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	tier1	-	-	42	0	0.00	105	165	61.11
VDAC1	0	genome.wustl.edu	37	5	133316708	133316708	+	RNA	DEL	T	T	-			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	5	133316708	133316708	T	-	DEL	VDAC1	ENST00000492324	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VDAC1	HGNC	ENSG00000213585	tier1			8	0	0.00	13	3	18.75
SULF1	0	genome.wustl.edu	37	8	70533469	70533469	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	8	70533469	70533469	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1577	p.R526K	1.000	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	29	0	0.00	18	6	25.00
REV3L	0	genome.wustl.edu	37	6	111688371	111688371	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	6	111688371	111688371	C	G	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.6620	p.R2207T	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	54	0	0.00	85	437	83.56
SULF1	0	genome.wustl.edu	37	8	70533412	70533412	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	8	70533412	70533412	G	A	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.1520	p.R507K	0.076	superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	33	0	0.00	26	7	21.21
RNF213	0	genome.wustl.edu	37	17	78268762	78268762	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	17	78268762	78268762	A	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.1715	p.Q572L	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	47	0	0.00	39	10	20.41
MUC5AC	0	genome.wustl.edu	37	11	1214194	1214194	+	RNA	SNP	T	T	C			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	11	1214194	1214194	T	C	SNP	MUC5AC	ENST00000358378	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.016	-	-	-	no_errors	MUC5AC	HGNC	ENSG00000215182	tier1	-	-	46	0	0.00	19	18	48.65
SERPINA11	0	genome.wustl.edu	37	14	94909524	94909524	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A23Y-01A-11D-A27P-09	TCGA-DX-A23Y-10A-01D-A27P-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d4936d96-0bcc-45f5-8c25-88095c8c18cc	21bc6cb1-b5ea-4cc1-9c9e-4f9885cee5d0	14	94909524	94909524	C	T	SNP	SERPINA11	ENST00000334708	human	ensembl	74_37	-1	known	missense	c.956	p.G319E	0.034	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA11	HGNC	ENSG00000186910	tier1	-	-	68	0	0.00	39	11	22.00
