Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
CALHM1	0	genome.wustl.edu	37	10	105215261	105215261	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	10	105215261	105215261	G	A	SNP	CALHM1	ENST00000329905	human	ensembl	74_37	-1	known	silent	c.799	p.L267	0.115	NULL	NULL	-	no_errors	CALHM1	HGNC	ENSG00000185933	tier1	-	-	162	1	0.61	1	34	97.14
FBXO5	0	genome.wustl.edu	37	6	153294183	153294183	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	153294183	153294183	T	C	SNP	FBXO5	ENST00000229758	human	ensembl	74_37	-1	known	missense	c.907	p.T303A	0.008	NULL	pfam_F-box_dom,superfamily_F-box_dom	-	no_errors	FBXO5	HGNC	ENSG00000112029	tier1	-	-	124	0	0.00	13	14	51.85
GRIN2D	0	genome.wustl.edu	37	19	48945211	48945211	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	19	48945211	48945211	A	G	SNP	GRIN2D	ENST00000263269	human	ensembl	74_37	+1	known	missense	c.2438	p.D813G	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2D	HGNC	ENSG00000105464	tier1	-	-	74	0	0.00	25	9	25.71
GSDMD	0	genome.wustl.edu	37	8	144642051	144642051	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	8	144642051	144642051	G	T	SNP	GSDMD	ENST00000262580	human	ensembl	74_37	+1	known	missense	c.322	p.A108S	0.074	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMD	HGNC	ENSG00000104518	tier1	-	-	87	0	0.00	24	18	42.86
SNHG15	0	genome.wustl.edu	37	7	45025228	45025228	+	RNA	DEL	T	T	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	7	45025228	45025228	T	-	DEL	SNHG15	ENST00000577700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG15	HGNC	ENSG00000232956	tier1			54	0	0.00	13	2	13.33
SCN1A	0	genome.wustl.edu	37	2	166908339	166908339	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	166908339	166908339	G	A	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.854	p.A285V	0.015	pfam_Ion_trans_dom,prints_Na_channel_a1su	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285	tier1	-	-	109	0	0.00	21	16	43.24
NCAPG	0	genome.wustl.edu	37	4	17838918	17838918	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	17838918	17838918	G	T	SNP	NCAPG	ENST00000251496	human	ensembl	74_37	+1	known	missense	c.2246	p.R749L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NCAPG	HGNC	ENSG00000109805	tier1	-	-	130	0	0.00	23	3	11.54
SND1	0	genome.wustl.edu	37	7	127347658	127347658	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	7	127347658	127347658	C	A	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.995	p.P332H	1.000	superfamily_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157	tier1	-	-	67	0	0.00	16	10	38.46
LINC00052	0	genome.wustl.edu	37	15	88121557	88121558	+	RNA	DEL	CA	CA	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	15	88121557	88121558	CA	-	DEL	LINC00052	ENST00000560153	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	LINC00052	HGNC	ENSG00000259527	tier1			170	1	0.58	23	3	11.54
LOC101927958	0	genome.wustl.edu	37	2	239140352	239140353	+	RNA	INS	-	-	GGCCTCCGGGCCGCGGC			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	239140352	239140353	-	GGCCTCCGGGCCGCGGC	INS	LOC101927958	ENST00000456601	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC096574.4	Clone_based_vega_gene	ENSG00000225057	tier1			NA	NA	NA	NA	NA	NA
CTNND2	0	genome.wustl.edu	37	5	11117589	11117589	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	11117589	11117589	C	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	silent	c.2250	p.A750	0.188	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862	tier1	-	-	137	0	0.00	17	21	55.26
EFCAB6-AS1	0	genome.wustl.edu	37	22	43930759	43930759	+	RNA	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	22	43930759	43930759	A	-	DEL	EFCAB6-AS1	ENST00000431327	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	EFCAB6-AS1	HGNC	ENSG00000223843	tier1			43	0	0.00	2	9	81.82
MYRF	0	genome.wustl.edu	37	11	61541466	61541466	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	11	61541466	61541466	G	A	SNP	MYRF	ENST00000278836	human	ensembl	74_37	+1	known	silent	c.1143	p.A381	0.259	superfamily_p53-like_TF_DNA-bd	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRF	HGNC	ENSG00000124920	tier1	-	-	49	0	0.00	13	3	18.75
PACS2	0	genome.wustl.edu	37	14	105843157	105843157	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	14	105843157	105843157	A	G	SNP	PACS2	ENST00000458164	human	ensembl	74_37	+1	known	missense	c.854	p.D285G	1.000	NULL	pfam_Phosphofurin_acidic_CS-1	-	no_errors	PACS2	HGNC	ENSG00000179364	tier1	-	-	144	0	0.00	41	21	33.87
SUFU	0	genome.wustl.edu	37	10	104352400	104352401	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	10	104352400	104352401	AA	-	DEL	SUFU	ENST00000369902	human	ensembl	74_37	+1	known	frame_shift_del	c.516_517	p.R173fs	0.987:1.000	pfam_SUFU-like_domain,pirsf_Suppressor_of_fused_euk	pfam_SUFU_C,pfam_SUFU-like_domain,pirsf_Suppressor_of_fused_euk	-	no_errors	SUFU	HGNC	ENSG00000107882	tier1			53	0	0.00	14	2	12.50
DNAJC8	0	genome.wustl.edu	37	1	28535044	28535045	+	RNA	INS	-	-	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	28535044	28535045	-	A	INS	DNAJC8	ENST00000470967	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DNAJC8	HGNC	ENSG00000126698	tier1			21	0	0.00	8	3	27.27
SERPINB8	0	genome.wustl.edu	37	18	61654403	61654403	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	18	61654403	61654403	G	T	SNP	SERPINB8	ENST00000353706	human	ensembl	74_37	+1	known	missense	c.1016	p.R339L	0.017	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB8	HGNC	ENSG00000166401	tier1	-	-	90	0	0.00	20	4	16.67
MAP3K11	0	genome.wustl.edu	37	11	65374848	65374848	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	11	65374848	65374848	A	T	SNP	MAP3K11	ENST00000309100	human	ensembl	74_37	-1	known	missense	c.1382	p.L461Q	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K11	HGNC	ENSG00000173327	tier1	-	-	13	0	0.00	5	10	66.67
EMID1	0	genome.wustl.edu	37	22	29611585	29611585	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	22	29611585	29611585	C	T	SNP	EMID1	ENST00000334018	human	ensembl	74_37	+1	known	silent	c.285	p.C95	1.000	pfam_EMI_domain,pfscan_EMI_domain	pfam_Collagen,pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMID1	HGNC	ENSG00000186998	tier1	-	-	97	0	0.00	20	3	13.04
TESK2	0	genome.wustl.edu	37	1	45811025	45811025	+	Silent	SNP	A	A	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	45811025	45811025	A	C	SNP	TESK2	ENST00000372086	human	ensembl	74_37	-1	known	silent	c.1203	p.P401	0.999	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK2	HGNC	ENSG00000070759	tier1	-	-	89	0	0.00	14	13	48.15
LOC101927345	0	genome.wustl.edu	37	1	143398949	143398949	+	RNA	SNP	A	A	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	143398949	143398949	A	T	SNP	LOC101927345	ENST00000458155	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.181	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	70	0	0.00	20	3	13.04
PRIM2	0	genome.wustl.edu	37	6	57512787	57512788	+	RNA	INS	-	-	CACCAAGGC			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	57512787	57512788	-	CACCAAGGC	INS	PRIM2	ENST00000389488	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057:0.034	-	-	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1			NA	NA	NA	NA	NA	NA
DOCK8	0	genome.wustl.edu	37	9	379812	379812	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	9	379812	379812	G	A	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.2482	p.A828T	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	rs138519226	-	150	0	0.00	25	26	50.00
SPATA31A6	0	genome.wustl.edu	37	9	43626916	43626916	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	9	43626916	43626916	G	C	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.1771	p.L591V	0.002	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775	tier1	-	-	177	0	0.00	73	59	44.70
POU4F2	0	genome.wustl.edu	37	4	147561228	147561228	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	147561228	147561228	G	A	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	silent	c.498	p.A166	0.217	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615	tier1	-	-	122	0	0.00	25	23	47.92
LOC100129434	0	genome.wustl.edu	37	2	56404786	56404786	+	RNA	SNP	T	T	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	56404786	56404786	T	G	SNP	LOC100129434	ENST00000432793	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC007743.1	Clone_based_vega_gene	ENSG00000233251	tier1	-	-	118	0	0.00	19	5	20.83
RANGAP1	0	genome.wustl.edu	37	22	41642642	41642642	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	22	41642642	41642642	G	-	DEL	RANGAP1	ENST00000356244	human	ensembl	74_37	-1	known	frame_shift_del	c.1729	p.R577fs	1.000	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RANGAP1	HGNC	ENSG00000100401	tier1			133	0	0.00	21	2	8.70
THAP11	0	genome.wustl.edu	37	16	67876994	67876994	+	Silent	SNP	T	T	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	16	67876994	67876994	T	C	SNP	THAP11	ENST00000303596	human	ensembl	74_37	+1	known	silent	c.537	p.T179	0.999	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP11	HGNC	ENSG00000168286	tier1	-	-	86	0	0.00	1	14	93.33
KIAA1191	0	genome.wustl.edu	37	5	175782612	175782612	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	175782612	175782612	G	A	SNP	KIAA1191	ENST00000298569	human	ensembl	74_37	-1	known	missense	c.169	p.P57S	1.000	NULL	NULL	-	no_errors	KIAA1191	HGNC	ENSG00000122203	tier1	-	-	98	0	0.00	24	4	14.29
FLAD1	0	genome.wustl.edu	37	1	154956441	154956442	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	154956441	154956442	-	T	INS	FLAD1	ENST00000292180	human	ensembl	74_37	+1	novel	frame_shift_ins	c.271_272	p.R91fs	0.034:0.042	pirsf_FAD_synth_Mopterin-bd	pfam_Mopterin-bd_dom,pfam_PAPS_reduct,superfamily_Mopterin-bd_dom,smart_Mopterin-bd_dom,pirsf_FAD_synth_Mopterin-bd	-	no_errors	FLAD1	HGNC	ENSG00000160688	tier1			86	0	0.00	22	17	43.59
MAML3	0	genome.wustl.edu	37	4	140811086	140811096	+	Frame_Shift_Del	DEL	GCTGCTGCTGC	GCTGCTGCTGC	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	GCTGCTGCTGC	GCTGCTGCTGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	140811086	140811096	GCTGCTGCTGC	-	DEL	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	frame_shift_del	c.1504_1494	p.Q499fs	1.000:1.000:0.999:1.000:0.997:1.000:1.000:0.999:1.000:1.000:0.999	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782	tier1			NA	NA	NA	NA	NA	NA
GPR111	0	genome.wustl.edu	37	6	47649471	47649471	+	Silent	SNP	A	A	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	47649471	47649471	A	G	SNP	GPR111	ENST00000296862	human	ensembl	74_37	+1	known	silent	c.1176	p.T392	0.004	pfam_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR111	HGNC	ENSG00000164393	tier1	-	-	60	0	0.00	9	6	40.00
S100A7L2	0	genome.wustl.edu	37	1	153410753	153410753	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	153410753	153410753	C	T	SNP	S100A7L2	ENST00000368725	human	ensembl	74_37	-1	known	missense	c.86	p.R29H	0.000	NULL	pfscan_EF_hand_dom	-	no_errors	S100A7L2	HGNC	ENSG00000197364	tier1	-	-	37	0	0.00	6	6	50.00
USP9Y	0	genome.wustl.edu	37	Y	14902412	14902412	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	Y	14902412	14902412	G	A	SNP	USP9Y	ENST00000338981	human	ensembl	74_37	+1	known	missense	c.3634	p.E1212K	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,superfamily_Glycoside_hydrolase_SF,pfscan_Peptidase_C19/C67	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1	-	-	98	0	0.00	20	3	13.04
SYT16	0	genome.wustl.edu	37	14	62550996	62550996	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	14	62550996	62550996	C	T	SNP	SYT16	ENST00000430451	human	ensembl	74_37	+1	novel	missense	c.1517	p.A506V	0.999	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT16	HGNC	ENSG00000139973	tier1	-	-	69	0	0.00	3	9	75.00
DYNC1H1	0	genome.wustl.edu	37	14	102493601	102493601	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	14	102493601	102493601	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	silent	c.8862	p.N2954	0.786	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	175	0	0.00	5	32	86.49
PRTN3	0	genome.wustl.edu	37	19	841040	841040	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	19	841040	841040	C	T	SNP	PRTN3	ENST00000234347	human	ensembl	74_37	+1	known	missense	c.32	p.A11V	0.002	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRTN3	HGNC	ENSG00000196415	tier1	-	-	156	0	0.00	41	21	33.87
OR52L1	0	genome.wustl.edu	37	11	6007790	6007790	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	11	6007790	6007790	G	T	SNP	OR52L1	ENST00000332249	human	ensembl	74_37	-1	known	missense	c.371	p.A124E	0.676	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52L1	HGNC	ENSG00000183313	tier1	-	-	118	0	0.00	5	24	82.76
PRSS1	0	genome.wustl.edu	37	7	142459862	142459862	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	7	142459862	142459862	C	A	SNP	PRSS1	ENST00000311737	human	ensembl	74_37	+1	known	missense	c.438	p.N146K	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS1	HGNC	ENSG00000204983	tier1	-	-	89	0	0.00	36	10	21.74
ENO2	0	genome.wustl.edu	37	12	7028828	7028828	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	12	7028828	7028828	A	-	DEL	ENO2	ENST00000229277	human	ensembl	74_37	+1	known	frame_shift_del	c.766	p.K256fs	1.000	pfam_Enolase_C,pirsf_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pfam_MeAsp_NH4-lyase_C,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO2	HGNC	ENSG00000111674	tier1			78	0	0.00	16	2	11.11
EDEM2	0	genome.wustl.edu	37	20	33730242	33730242	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	20	33730242	33730242	C	T	SNP	EDEM2	ENST00000374492	human	ensembl	74_37	-1	known	missense	c.298	p.V100M	0.998	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM2	HGNC	ENSG00000088298	tier1	-	-	81	0	0.00	19	22	53.66
CERS6	0	genome.wustl.edu	37	2	169571588	169571588	+	Silent	SNP	A	A	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	169571588	169571588	A	C	SNP	CERS6	ENST00000392687	human	ensembl	74_37	+1	known	silent	c.687	p.R229	1.000	pfam_TLC-dom,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom	pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_TLC-dom,pirsf_Longevity_assurance_LAG1_LAC1,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS6	HGNC	ENSG00000172292	tier1	-	-	168	0	0.00	53	11	17.19
WDR52	0	genome.wustl.edu	37	3	113045447	113045447	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	3	113045447	113045447	T	-	DEL	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	frame_shift_del	c.4361	p.K1454fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	tier1			60	0	0.00	16	2	11.11
OTUD6B	0	genome.wustl.edu	37	8	92096322	92096322	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	8	92096322	92096322	A	-	DEL	OTUD6B	ENST00000285420	human	ensembl	74_37	+1	known	frame_shift_del	c.867	p.K291fs	0.000	pfam_OTU,pfscan_OTU	pfam_OTU,pfam_Peptidase_C65_otubain,pfscan_OTU	-	no_errors	OTUD6B	HGNC	ENSG00000155100	tier1			97	0	0.00	32	3	8.57
CCDC30	0	genome.wustl.edu	37	1	42948563	42948563	+	RNA	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	42948563	42948563	A	-	DEL	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			24	0	0.00	21	3	12.50
ATRX	0	genome.wustl.edu	37	X	76937411	76937411	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	X	76937411	76937411	C	A	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	nonsense	c.3337	p.E1113*	0.992	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	16	0	0.00	0	16	100.00
ANO8	0	genome.wustl.edu	37	19	17443927	17443927	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	19	17443927	17443927	G	A	SNP	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	missense	c.472	p.R158C	0.988	NULL	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855	tier1	-	-	65	0	0.00	7	20	74.07
VPS16	0	genome.wustl.edu	37	20	2842314	2842314	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	20	2842314	2842314	G	A	SNP	VPS16	ENST00000380445	human	ensembl	74_37	+1	known	missense	c.863	p.R288Q	1.000	pfam_Vps16_N,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC	ENSG00000215305	tier1	-	-	135	0	0.00	11	32	74.42
GSDMD	0	genome.wustl.edu	37	8	144642052	144642052	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	8	144642052	144642052	C	A	SNP	GSDMD	ENST00000262580	human	ensembl	74_37	+1	known	missense	c.323	p.A108D	0.067	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMD	HGNC	ENSG00000104518	tier1	-	-	87	0	0.00	24	16	40.00
HIF1A	0	genome.wustl.edu	37	14	62187220	62187220	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	14	62187220	62187220	G	A	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	silent	c.228	p.S76	0.024	superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	102	0	0.00	18	4	18.18
KRT74	0	genome.wustl.edu	37	12	52965747	52965747	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	12	52965747	52965747	T	G	SNP	KRT74	ENST00000305620	human	ensembl	74_37	-1	known	missense	c.728	p.E243A	1.000	pfam_IF,prints_Keratin_II	pfam_IF,prints_Keratin_II	-	no_errors	KRT74	HGNC	ENSG00000170484	tier1	-	-	129	0	0.00	13	3	18.75
HERC2	0	genome.wustl.edu	37	15	28421691	28421691	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	15	28421691	28421691	C	G	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.9569	p.S3190T	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	tier1	-	-	319	0	0.00	8	59	88.06
YY1	0	genome.wustl.edu	37	14	100728670	100728670	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	14	100728670	100728670	G	C	SNP	YY1	ENST00000262238	human	ensembl	74_37	+1	known	missense	c.709	p.V237L	1.000	pirsf_TF_Yin_yang	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY1	HGNC	ENSG00000100811	tier1	-	-	101	0	0.00	15	6	28.57
FBN2	0	genome.wustl.edu	37	5	127645047	127645047	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	127645047	127645047	A	-	DEL	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	frame_shift_del	c.5245	p.C1749fs	0.993	pirsf_FBN,pfam_TB_dom,superfamily_TB_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1			73	0	0.00	17	2	10.53
STRADA	0	genome.wustl.edu	37	17	61787902	61787903	+	In_Frame_Ins	INS	-	-	GCAGGATGTAAGCAATCGCCA			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	61787902	61787903	-	GCAGGATGTAAGCAATCGCCA	INS	STRADA	ENST00000336174	human	ensembl	74_37	-1	known	in_frame_ins	c.530_529	p.177in_frame_insLAIAYIL	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADA	HGNC	ENSG00000266173	tier1			NA	NA	NA	NA	NA	NA
MCAM	0	genome.wustl.edu	37	11	119183296	119183296	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	11	119183296	119183296	C	T	SNP	MCAM	ENST00000264036	human	ensembl	74_37	-1	known	missense	c.802	p.V268M	0.996	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MCAM	HGNC	ENSG00000076706	tier1	-	-	63	0	0.00	13	13	50.00
FAM131B	0	genome.wustl.edu	37	7	143053674	143053674	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	7	143053674	143053674	A	G	SNP	FAM131B	ENST00000443739	human	ensembl	74_37	-1	known	missense	c.1052	p.F351S	1.000	NULL	NULL	-	no_errors	FAM131B	HGNC	ENSG00000159784	tier1	-	-	60	0	0.00	14	12	46.15
EPHA4	0	genome.wustl.edu	37	2	222283801	222283801	+	RNA	DEL	T	T	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	222283801	222283801	T	-	DEL	EPHA4	ENST00000469354	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	EPHA4	HGNC	ENSG00000116106	tier1			78	0	0.00	14	2	12.50
PCDHB4	0	genome.wustl.edu	37	5	140502487	140502487	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	140502487	140502487	A	-	DEL	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	frame_shift_del	c.907	p.K305fs	0.078	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1			41	0	0.00	11	4	26.67
NCKAP1	0	genome.wustl.edu	37	2	183806893	183806894	+	Splice_Site	INS	-	-	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	183806893	183806894	-	A	INS	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	splice_site_ins	c.2620-3_2620-2	e25-2	0.999:0.019	-	-	-	no_errors	NCKAP1	HGNC	ENSG00000061676	tier1			96	0	0.00	12	3	20.00
KIAA1804	0	genome.wustl.edu	37	1	233482270	233482270	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	233482270	233482270	G	A	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	nonsense	c.888	p.W296*	1.000	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674	tier1	-	-	66	0	0.00	1	18	94.74
EXOC7	0	genome.wustl.edu	37	17	74077182	74077182	+	RNA	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	74077182	74077182	G	A	SNP	EXOC7	ENST00000591724	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EXOC7	HGNC	ENSG00000182473	tier1	-	-	50	0	0.00	3	14	82.35
LINC00461	0	genome.wustl.edu	37	5	87972088	87972088	+	RNA	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	87972088	87972088	G	T	SNP	LINC00461	ENST00000504246	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00461	HGNC	ENSG00000245526	tier1	-	-	71	0	0.00	21	3	12.50
ANKRD34C	0	genome.wustl.edu	37	15	79587136	79587136	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	15	79587136	79587136	A	G	SNP	ANKRD34C	ENST00000421388	human	ensembl	74_37	+1	known	missense	c.1510	p.R504G	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34C	HGNC	ENSG00000235711	tier1	-	-	71	0	0.00	5	18	78.26
GLYATL3	0	genome.wustl.edu	37	6	49494259	49494259	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	49494259	49494259	C	T	SNP	GLYATL3	ENST00000371197	human	ensembl	74_37	+1	known	missense	c.499	p.R167W	0.867	pfam_Glycine_N-acyltransferase_N,superfamily_Acyl_CoA_acyltransferase	pfam_Glycine_N-acyltransferase_N,pfam_Glycine_N-acyltransferase_C,pfam_FR47,superfamily_Acyl_CoA_acyltransferase	-	no_errors	GLYATL3	HGNC	ENSG00000203972	tier1	-	-	128	0	0.00	31	26	45.61
TMEM184B	0	genome.wustl.edu	37	22	38643803	38643803	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	22	38643803	38643803	C	-	DEL	TMEM184B	ENST00000361684	human	ensembl	74_37	-1	known	frame_shift_del	c.165	p.W55fs	1.000	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184B	HGNC	ENSG00000198792	tier1			77	0	0.00	18	2	10.00
XKR6	0	genome.wustl.edu	37	8	11052720	11052720	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	8	11052720	11052720	G	T	SNP	XKR6	ENST00000297303	human	ensembl	74_37	-1	putative	missense	c.775	p.P259T	0.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR6	HGNC	ENSG00000171044	tier1	-	-	135	0	0.00	13	21	61.76
FAM3D	0	genome.wustl.edu	37	3	58629402	58629402	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	3	58629402	58629402	G	A	SNP	FAM3D	ENST00000358781	human	ensembl	74_37	-1	known	silent	c.309	p.I103	0.988	NULL	NULL	-	no_errors	FAM3D	HGNC	ENSG00000198643	tier1	-	-	160	0	0.00	27	9	25.00
ATP10D	0	genome.wustl.edu	37	4	47537547	47537547	+	Silent	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	47537547	47537547	C	A	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	silent	c.798	p.R266	0.090	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246	tier1	-	-	94	0	0.00	4	15	78.95
HMGB1	0	genome.wustl.edu	37	13	31035551	31035551	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	13	31035551	31035551	C	A	SNP	HMGB1	ENST00000339872	human	ensembl	74_37	-1	known	missense	c.591	p.E197D	0.679	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGB1	HGNC	ENSG00000189403	tier1	-	-	54	0	0.00	9	2	18.18
PROL1	0	genome.wustl.edu	37	4	71265275	71265275	+	RNA	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	71265275	71265275	C	T	SNP	PROL1	ENST00000514338	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	PROL1	HGNC	ENSG00000171199	tier1	-	-	9	0	0.00	2	7	77.78
LRP2	0	genome.wustl.edu	37	2	170163909	170163909	+	Splice_Site	SNP	T	T	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	170163909	170163909	T	C	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	splice_site	c.311-2	e4-2	1.000	-	-	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	52	0	0.00	1	12	92.31
ENSG00000262112	0	genome.wustl.edu	37	17	54969002	54969002	+	RNA	SNP	T	T	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	54969002	54969002	T	C	SNP	ENSG00000262112	ENST00000574826	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-670E13.5	Clone_based_vega_gene	ENSG00000262112	tier1	-	-	19	0	0.00	1	7	87.50
C6orf10	0	genome.wustl.edu	37	6	32283562	32283562	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	32283562	32283562	C	T	SNP	C6orf10	ENST00000442822	human	ensembl	74_37	-1	putative	silent	c.540	p.S180	0.861	NULL	NULL	-	no_errors	C6orf10	HGNC	ENSG00000204296	tier1	-	-	71	0	0.00	21	9	30.00
CECR2	0	genome.wustl.edu	37	22	17983960	17983960	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	22	17983960	17983960	G	A	SNP	CECR2	ENST00000400573	human	ensembl	74_37	+1	novel	missense	c.716	p.R239H	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	tier1	-	-	80	0	0.00	4	9	69.23
DMGDH	0	genome.wustl.edu	37	5	78338141	78338141	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	78338141	78338141	C	T	SNP	DMGDH	ENST00000255189	human	ensembl	74_37	-1	known	silent	c.1158	p.Q386	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_SoxG	-	no_errors	DMGDH	HGNC	ENSG00000132837	tier1	-	-	79	0	0.00	11	23	67.65
NLRP5	0	genome.wustl.edu	37	19	56539567	56539567	+	Silent	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	19	56539567	56539567	C	T	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	+1	known	silent	c.1968	p.P656	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487	tier1	-	-	77	0	0.00	21	13	38.24
CPN1	0	genome.wustl.edu	37	10	101841286	101841286	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	10	101841286	101841286	G	A	SNP	CPN1	ENST00000370418	human	ensembl	74_37	-1	known	missense	c.97	p.R33W	0.997	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_DUF2817,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPN1	HGNC	ENSG00000120054	tier1	-	-	99	0	0.00	17	3	15.00
ZFYVE27	0	genome.wustl.edu	37	10	99511211	99511211	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	10	99511211	99511211	G	T	SNP	ZFYVE27	ENST00000356257	human	ensembl	74_37	+1	known	missense	c.883	p.A295S	1.000	superfamily_Znf_FYVE_PHD	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256	tier1	-	-	174	0	0.00	31	4	11.43
SMG6	0	genome.wustl.edu	37	17	1968420	1968420	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	1968420	1968420	C	T	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.4076	p.C1359Y	1.000	smart_PIN_dom	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366	tier1	-	-	102	0	0.00	37	4	9.76
TAF1L	0	genome.wustl.edu	37	9	32635336	32635336	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	9	32635336	32635336	G	A	SNP	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	missense	c.242	p.T81M	1.000	pirsf_TAF1_animal,pfam_TAF_II_230-bd,superfamily_TAF_II_230-bd	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	tier1	-	-	207	0	0.00	77	10	11.36
TAS1R2	0	genome.wustl.edu	37	1	19181394	19181394	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	19181394	19181394	G	A	SNP	TAS1R2	ENST00000375371	human	ensembl	74_37	-1	novel	silent	c.570	p.H190	0.003	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R2	HGNC	ENSG00000179002	tier1	-	-	73	0	0.00	21	6	22.22
WASH3P	0	genome.wustl.edu	37	15	102515215	102515215	+	Splice_Site	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	15	102515215	102515215	G	A	SNP	WASH3P	ENST00000557932	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.209	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1	-	-	467	0	0.00	63	8	11.27
PCDHB1	0	genome.wustl.edu	37	5	140431715	140431715	+	Silent	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	140431715	140431715	G	A	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	silent	c.660	p.P220	0.659	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815	tier1	-	-	45	0	0.00	5	4	44.44
LAMB3	0	genome.wustl.edu	37	1	209796433	209796433	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	209796433	209796433	C	T	SNP	LAMB3	ENST00000356082	human	ensembl	74_37	-1	known	missense	c.2450	p.R817H	0.799	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB3	HGNC	ENSG00000196878	tier1	-	-	99	0	0.00	20	16	44.44
PCDH11Y	0	genome.wustl.edu	37	Y	4925426	4925426	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	Y	4925426	4925426	T	A	SNP	PCDH11Y	ENST00000215473	human	ensembl	74_37	+1	known	missense	c.562	p.S188T	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11Y	HGNC	ENSG00000099715	tier1	-	-	71	0	0.00	1	20	95.24
OR4X2	0	genome.wustl.edu	37	11	48267306	48267306	+	Silent	SNP	G	G	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	11	48267306	48267306	G	C	SNP	OR4X2	ENST00000302329	human	ensembl	74_37	+1	known	silent	c.651	p.L217	0.126	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4X2	HGNC	ENSG00000172208	tier1	-	-	52	0	0.00	15	12	44.44
PPIP5K2	0	genome.wustl.edu	37	5	102503855	102503855	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	5	102503855	102503855	G	T	SNP	PPIP5K2	ENST00000358359	human	ensembl	74_37	+1	known	missense	c.2142	p.K714N	1.000	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	PPIP5K2	HGNC	ENSG00000145725	tier1	-	-	150	0	0.00	35	25	41.67
METTL16	0	genome.wustl.edu	37	17	2310279	2310279	+	RNA	SNP	G	G	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	2310279	2310279	G	A	SNP	METTL16	ENST00000571332	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	METTL16	HGNC	ENSG00000127804	tier1	-	-	83	0	0.00	24	15	38.46
DDX43	0	genome.wustl.edu	37	6	74125300	74125301	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	6	74125300	74125301	-	A	INS	DDX43	ENST00000370336	human	ensembl	74_37	+1	known	frame_shift_ins	c.1826_1827	p.N610fs	1.000:1.000	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_KH_dom_type_1,superfamily_P-loop_NTPase,smart_KH_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_KH_dom_type_1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX43	HGNC	ENSG00000080007	tier1			95	0	0.00	23	2	8.00
MMRN1	0	genome.wustl.edu	37	4	90856549	90856549	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	4	90856549	90856549	A	C	SNP	MMRN1	ENST00000264790	human	ensembl	74_37	+1	known	missense	c.1718	p.K573T	1.000	NULL	pfam_C1q,pfam_EMI_domain,pfam_EG-like_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MMRN1	HGNC	ENSG00000138722	tier1	-	-	24	0	0.00	10	12	54.55
JUP	0	genome.wustl.edu	37	17	39912102	39912103	+	Frame_Shift_Ins	INS	-	-	GGGGCACATCGCT			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	39912102	39912103	-	GGGGCACATCGCT	INS	JUP	ENST00000310706	human	ensembl	74_37	-1	known	frame_shift_ins	c.2132_2131	p.L711fs	0.999:0.999	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801	tier1			NA	NA	NA	NA	NA	NA
TP53	0	genome.wustl.edu	37	17	7579470	7579471	+	Frame_Shift_Ins	INS	-	-	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	17	7579470	7579471	-	G	INS	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_ins	c.217_216	p.V72fs	0.000:0.001	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			78	0	0.00	13	33	71.74
SNED1	0	genome.wustl.edu	37	2	241988519	241988519	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	2	241988519	241988519	T	C	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	missense	c.1585	p.C529R	0.990	NULL	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804	tier1	-	-	99	0	0.00	2	8	80.00
INADL	0	genome.wustl.edu	37	1	62253620	62253620	+	Silent	SNP	T	T	G			TCGA-DX-A6B8-01A-11D-A307-09	TCGA-DX-A6B8-10A-01D-A307-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f06f79b3-53f9-4c0a-935f-e721ebcada6b	b50283e5-96cd-4cf4-a35d-6a07340996aa	1	62253620	62253620	T	G	SNP	INADL	ENST00000371158	human	ensembl	74_37	+1	known	silent	c.1044	p.T348	0.001	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849	tier1	-	-	80	0	0.00	31	26	45.61
