Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PTPN21	0	genome.wustl.edu	37	14	88946616	88946616	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	14	88946616	88946616	C	T	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.1159	p.G387S	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	29	0	0.00	27	6	18.18
PPCS	0	genome.wustl.edu	37	1	42925276	42925276	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	42925276	42925276	A	G	SNP	PPCS	ENST00000372561	human	ensembl	74_37	+1	known	missense	c.615	p.I205M	1.000	pfam_DNA/pantothenate-metab_flavo_C,superfamily_DNA/pantothenate-metab_flavo_C	pfam_DNA/pantothenate-metab_flavo_C,superfamily_DNA/pantothenate-metab_flavo_C	-	no_errors	PPCS	HGNC	ENSG00000127125	tier1	-	-	25	0	0.00	26	38	59.38
ASTE1	0	genome.wustl.edu	37	3	130733046	130733047	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	3	130733046	130733047	-	T	INS	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	frame_shift_ins	c.1895_1894	p.R632fs	0.003:0.014	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533	tier1			22	0	0.00	9	4	30.77
NXNL2	0	genome.wustl.edu	37	9	91150536	91150536	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	9	91150536	91150536	G	A	SNP	NXNL2	ENST00000375854	human	ensembl	74_37	+1	known	missense	c.187	p.A63T	0.997	superfamily_Thioredoxin-like_fold	superfamily_Thioredoxin-like_fold	-	no_errors	NXNL2	HGNC	ENSG00000130045	tier1	-	-	11	0	0.00	8	4	33.33
FOLH1	0	genome.wustl.edu	37	11	49207240	49207240	+	Silent	SNP	T	T	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	49207240	49207240	T	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.807	p.T269	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	91	0	0.00	72	29	28.71
ENSG00000227407	0	genome.wustl.edu	37	19	54942232	54942232	+	RNA	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	54942232	54942232	G	A	SNP	ENSG00000227407	ENST00000457113	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008746.3	Clone_based_vega_gene	ENSG00000227407	tier1	-	-	61	0	0.00	90	21	18.92
LOC101927211	0	genome.wustl.edu	37	6	57015419	57015419	+	RNA	SNP	A	A	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	6	57015419	57015419	A	T	SNP	LOC101927211	ENST00000589263	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-203B9.4	Clone_based_vega_gene	ENSG00000226803	tier1	-	-	30	0	0.00	14	35	71.43
CLDN8	0	genome.wustl.edu	37	21	31588020	31588020	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	21	31588020	31588020	G	A	SNP	CLDN8	ENST00000286809	human	ensembl	74_37	-1	known	missense	c.224	p.P75L	0.789	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin8,prints_Claudin14	-	no_errors	CLDN8	HGNC	ENSG00000156284	tier1	-	-	62	0	0.00	30	28	48.28
ENSG00000216193	0	genome.wustl.edu	37	2	176973387	176973388	+	RNA	INS	-	-	TGTGTG			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	176973387	176973388	-	TGTGTG	INS	ENSG00000216193	ENST00000401374	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.011:0.248	-	-	-	no_errors	AC009336.1	Clone_based_ensembl_gene	ENSG00000216193	tier1			NA	NA	NA	NA	NA	NA
BCL7B	0	genome.wustl.edu	37	7	72951686	72951686	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	72951686	72951686	G	A	SNP	BCL7B	ENST00000223368	human	ensembl	74_37	-1	known	missense	c.551	p.P184L	0.954	NULL	pfam_BCL7	-	no_errors	BCL7B	HGNC	ENSG00000106635	tier1	-	-	55	0	0.00	32	13	28.89
MAGEC1	0	genome.wustl.edu	37	X	140996581	140996581	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	X	140996581	140996581	A	G	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.3391	p.S1131G	0.009	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	41	0	0.00	8	48	85.71
CP	0	genome.wustl.edu	37	3	148924108	148924108	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	3	148924108	148924108	A	-	DEL	CP	ENST00000264613	human	ensembl	74_37	-1	known	frame_shift_del	c.1055	p.F352fs	1.000	pfam_Cu-oxidase_2,pfam_Cu-oxidase,superfamily_Cupredoxin	pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin	-	no_errors	CP	HGNC	ENSG00000047457	tier1			28	0	0.00	22	3	12.00
ENSG00000271787	0	genome.wustl.edu	37	2	10194736	10194736	+	RNA	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	10194736	10194736	C	T	SNP	ENSG00000271787	ENST00000607181	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-254F7.3	Clone_based_vega_gene	ENSG00000271787	tier1	-	-	128	0	0.00	33	4	10.81
LPHN1	0	genome.wustl.edu	37	19	14288464	14288464	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	14288464	14288464	C	T	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	missense	c.163	p.V55I	1.000	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071	tier1	-	-	42	0	0.00	38	8	17.39
KIR3DL2	0	genome.wustl.edu	37	19	55363537	55363537	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	55363537	55363537	G	A	SNP	KIR3DL2	ENST00000326321	human	ensembl	74_37	+1	known	missense	c.155	p.R52H	0.000	pfam_Immunoglobulin,smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL2	HGNC	ENSG00000240403	tier1	-	-	31	0	0.00	20	12	37.50
MOGAT2	0	genome.wustl.edu	37	11	75440005	75440005	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	75440005	75440005	T	A	SNP	MOGAT2	ENST00000198801	human	ensembl	74_37	+1	known	missense	c.821	p.I274K	0.099	pfam_DAGAT	pfam_DAGAT	-	no_errors	MOGAT2	HGNC	ENSG00000166391	tier1	-	-	26	0	0.00	29	6	17.14
OTOG	0	genome.wustl.edu	37	11	17653668	17653668	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	17653668	17653668	C	T	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	missense	c.7003	p.R2335W	0.999	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	57	0	0.00	59	18	23.08
SIAE	0	genome.wustl.edu	37	11	124543597	124543597	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	124543597	124543597	G	A	SNP	SIAE	ENST00000263593	human	ensembl	74_37	-1	known	missense	c.8	p.A3V	0.000	NULL	pfam_DUF303_acetylest	-	no_errors	SIAE	HGNC	ENSG00000110013	tier1	-	-	232	0	0.00	100	45	31.03
ZZZ3	0	genome.wustl.edu	37	1	78030139	78030139	+	RNA	DEL	A	A	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	78030139	78030139	A	-	DEL	ZZZ3	ENST00000481346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZZZ3	HGNC	ENSG00000036549	tier1			24	0	0.00	17	6	26.09
ILVBL	0	genome.wustl.edu	37	19	15234361	15234361	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	15234361	15234361	G	A	SNP	ILVBL	ENST00000263383	human	ensembl	74_37	-1	known	silent	c.162	p.G54	0.470	pfam_Thiamin_PyroP_enz_TPP-bd_dom	pfam_Thiamin_PyroP_enz_TPP-bd_dom,pfam_TPP_enzyme-bd_C,pfam_Thiamin_PyroP_enz_cen_dom	-	no_errors	ILVBL	HGNC	ENSG00000105135	tier1	-	-	36	0	0.00	21	7	25.00
RTEL1	0	genome.wustl.edu	37	20	62292822	62292824	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	20	62292822	62292824	GCT	-	DEL	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	in_frame_del	c.274_276	p.A95in_frame_del	0.006:0.021:0.035	superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1			14	0	0.00	15	2	11.76
CENPO	0	genome.wustl.edu	37	2	25016757	25016757	+	RNA	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	25016757	25016757	C	T	SNP	CENPO	ENST00000473476	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	CENPO	HGNC	ENSG00000138092	tier1	-	-	67	0	0.00	29	5	14.71
GJA8	0	genome.wustl.edu	37	1	147380140	147380140	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	147380140	147380140	G	A	SNP	GJA8	ENST00000240986	human	ensembl	74_37	+1	known	missense	c.58	p.V20I	0.995	pfam_Connexin_N	pfam_Connexin_N,pfam_Connexin50,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin50	-	no_errors	GJA8	HGNC	ENSG00000121634	tier1	-	-	35	0	0.00	17	36	67.92
VSIG10L	0	genome.wustl.edu	37	19	51844468	51844468	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	51844468	51844468	C	T	SNP	VSIG10L	ENST00000335624	human	ensembl	74_37	-1	novel	silent	c.834	p.T278	0.015	smart_Ig_sub	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	VSIG10L	HGNC	ENSG00000186806	tier1	-	-	72	0	0.00	82	18	18.00
CHRNA7	0	genome.wustl.edu	37	15	32460274	32460274	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	15	32460274	32460274	C	T	SNP	CHRNA7	ENST00000454250	human	ensembl	74_37	+1	known	missense	c.1211	p.A404V	0.031	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA7	HGNC	ENSG00000175344	tier1	-	-	108	0	0.00	103	19	15.57
FAT1	0	genome.wustl.edu	37	4	187539627	187539627	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	187539627	187539627	C	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	nonsense	c.8113	p.E2705*	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	31	0	0.00	7	21	75.00
SCN8A	0	genome.wustl.edu	37	12	52159701	52159701	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	52159701	52159701	C	T	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	nonsense	c.2791	p.R931*	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	69	0	0.00	53	23	30.26
ITGB7	0	genome.wustl.edu	37	12	53585695	53585695	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	53585695	53585695	C	T	SNP	ITGB7	ENST00000267082	human	ensembl	74_37	-1	known	missense	c.2264	p.R755H	0.996	pirsf_Integrin_bsu,pfam_Integrin_bsu_cyt_dom,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Plexin-like_fold,superfamily_Integrin_bsu_tail,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB7	HGNC	ENSG00000139626	tier1	-	-	91	0	0.00	68	17	20.00
SLC7A3	0	genome.wustl.edu	37	X	70147136	70147136	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	X	70147136	70147136	G	A	SNP	SLC7A3	ENST00000298085	human	ensembl	74_37	-1	known	missense	c.1282	p.L428F	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	-	no_errors	SLC7A3	HGNC	ENSG00000165349	tier1	-	-	25	0	0.00	21	20	48.78
MYO1G	0	genome.wustl.edu	37	7	45005706	45005706	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	45005706	45005706	C	T	SNP	MYO1G	ENST00000258787	human	ensembl	74_37	-1	known	missense	c.2123	p.R708H	0.001	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO1G	HGNC	ENSG00000136286	tier1	-	-	32	0	0.00	9	7	43.75
PIM3	0	genome.wustl.edu	37	22	50355434	50355434	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	22	50355434	50355434	G	T	SNP	PIM3	ENST00000360612	human	ensembl	74_37	+1	known	missense	c.591	p.K197N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PIM3	HGNC	ENSG00000198355	tier1	-	-	58	0	0.00	43	4	8.51
ENSG00000263698	0	genome.wustl.edu	37	18	28711868	28711868	+	RNA	DEL	T	T	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	18	28711868	28711868	T	-	DEL	ENSG00000263698	ENST00000582307	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.072	-	-	-	no_errors	RP11-408H20.3	Clone_based_vega_gene	ENSG00000263698	tier1			28	0	0.00	26	4	13.33
KIAA0355	0	genome.wustl.edu	37	19	34838875	34838875	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	34838875	34838875	A	T	SNP	KIAA0355	ENST00000299505	human	ensembl	74_37	+1	known	missense	c.2615	p.N872I	1.000	NULL	NULL	-	no_errors	KIAA0355	HGNC	ENSG00000166398	tier1	-	-	39	0	0.00	30	11	26.19
RGS3	0	genome.wustl.edu	37	9	116359104	116359104	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	9	116359104	116359104	G	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	silent	c.3468	p.T1156	0.345	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835	tier1	-	-	72	0	0.00	77	16	17.20
AQP12B	0	genome.wustl.edu	37	2	241622006	241622006	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	241622006	241622006	G	A	SNP	AQP12B	ENST00000407834	human	ensembl	74_37	-1	known	silent	c.249	p.H83	0.972	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_MIP	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12B	HGNC	ENSG00000185176	tier1	-	-	127	0	0.00	88	25	22.12
HAPLN1	0	genome.wustl.edu	37	5	82940427	82940427	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	5	82940427	82940427	G	A	SNP	HAPLN1	ENST00000274341	human	ensembl	74_37	-1	known	missense	c.530	p.A177V	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link,prints_Link	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN1	HGNC	ENSG00000145681	tier1	-	-	41	0	0.00	38	16	29.63
FAM86B3P	0	genome.wustl.edu	37	8	8092059	8092059	+	RNA	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	8	8092059	8092059	A	G	SNP	FAM86B3P	ENST00000522601	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.354	-	-	-	no_errors	FAM86B3P	HGNC	ENSG00000173295	tier1	-	-	216	0	0.00	199	39	16.32
ABCA12	0	genome.wustl.edu	37	2	215940283	215940284	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	215940283	215940284	-	A	INS	ABCA12	ENST00000412081	human	ensembl	74_37	-1	novel	frame_shift_ins	c.221_220	p.S74fs	0.094:0.082	NULL	NULL	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1			36	0	0.00	29	3	9.38
ITPR2	0	genome.wustl.edu	37	12	26592165	26592165	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	26592165	26592165	C	A	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.6538	p.V2180L	0.996	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	57	0	0.00	26	19	42.22
UTP3	0	genome.wustl.edu	37	4	71554691	71554693	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	71554691	71554693	GGA	-	DEL	UTP3	ENST00000254803	human	ensembl	74_37	+1	known	in_frame_del	c.297_299	p.E103in_frame_del	0.002:0.002:0.002	NULL	pfam_Sas10_C_dom,pfam_Sas10/Utp3/C1D	-	no_errors	UTP3	HGNC	ENSG00000132467	tier1			38	0	0.00	19	3	13.64
KCNH2	0	genome.wustl.edu	37	7	150642533	150642533	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	150642533	150642533	G	A	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	nonsense	c.3400	p.R1134*	0.996	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118	tier1	-	-	40	0	0.00	32	32	50.00
AASDHPPT	0	genome.wustl.edu	37	11	105967630	105967630	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	105967630	105967630	C	T	SNP	AASDHPPT	ENST00000278618	human	ensembl	74_37	+1	known	missense	c.926	p.S309L	1.000	NULL	pfam_4-PPantetheinyl_Trfase_SF,superfamily_4-PPantetheinyl_Trfase_SF	-	no_errors	AASDHPPT	HGNC	ENSG00000149313	tier1	-	-	25	0	0.00	11	7	38.89
MEGF9	0	genome.wustl.edu	37	9	123476543	123476548	+	In_Frame_Del	DEL	CGGCGG	CGGCGG	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	CGGCGG	CGGCGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	9	123476543	123476548	CGGCGG	-	DEL	MEGF9	ENST00000426959	human	ensembl	74_37	-1	known	in_frame_del	c.70_65	p.AA22in_frame_del	0.255:0.243:0.247:0.263:0.993:0.998	NULL	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF9	HGNC	ENSG00000106780	tier1			NA	NA	NA	NA	NA	NA
ANKRD30BP2	0	genome.wustl.edu	37	21	14410709	14410709	+	RNA	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	21	14410709	14410709	C	T	SNP	ANKRD30BP2	ENST00000507941	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD30BP2	HGNC	ENSG00000224309	tier1	-	-	127	0	0.00	93	18	16.22
TAF7L	0	genome.wustl.edu	37	X	100531414	100531419	+	In_Frame_Del	DEL	TCATCC	TCATCC	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	TCATCC	TCATCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	X	100531414	100531419	TCATCC	-	DEL	TAF7L	ENST00000372907	human	ensembl	74_37	-1	known	in_frame_del	c.1052_1047	p.ED353in_frame_del	0.002:0.004:0.000:0.078:0.088:0.000	NULL	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7L	HGNC	ENSG00000102387	tier1			NA	NA	NA	NA	NA	NA
SHANK1	0	genome.wustl.edu	37	19	51201120	51201120	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	51201120	51201120	C	T	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.1841	p.R614H	0.109	superfamily_SH3_domain	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	78	0	0.00	78	25	24.27
TOX2	0	genome.wustl.edu	37	20	42635240	42635240	+	Silent	SNP	A	A	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	20	42635240	42635240	A	T	SNP	TOX2	ENST00000341197	human	ensembl	74_37	+1	known	silent	c.219	p.T73	0.963	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX2	HGNC	ENSG00000124191	tier1	-	-	58	0	0.00	31	18	36.73
OR2V2	0	genome.wustl.edu	37	5	180582017	180582017	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	5	180582017	180582017	C	A	SNP	OR2V2	ENST00000328275	human	ensembl	74_37	+1	known	missense	c.75	p.D25E	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2V2	HGNC	ENSG00000182613	tier1	-	-	76	0	0.00	62	26	29.55
DRAM2	0	genome.wustl.edu	37	1	111674157	111674157	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	111674157	111674157	C	A	SNP	DRAM2	ENST00000286692	human	ensembl	74_37	-1	known	missense	c.20	p.G7V	1.000	NULL	pfam_Frag1/DRAM/Sfk1	-	no_errors	DRAM2	HGNC	ENSG00000156171	tier1	-	-	58	0	0.00	42	4	8.70
SEPT11	0	genome.wustl.edu	37	4	77952007	77952007	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	77952007	77952007	G	T	SNP	SEPT11	ENST00000541121	human	ensembl	74_37	+1	known	missense	c.1188	p.K396N	1.000	pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT11	HGNC	ENSG00000138758	tier1	-	-	42	0	0.00	28	4	12.50
ZNF467	0	genome.wustl.edu	37	7	149462898	149462898	+	Silent	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	149462898	149462898	C	A	SNP	ZNF467	ENST00000302017	human	ensembl	74_37	-1	known	silent	c.693	p.L231	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF467	HGNC	ENSG00000181444	tier1	-	-	34	0	0.00	39	10	20.41
STAB2	0	genome.wustl.edu	37	12	103981330	103981330	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	103981330	103981330	G	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.76	p.G26W	0.000	NULL	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	44	0	0.00	41	9	18.00
ENSG00000201913	0	genome.wustl.edu	37	7	99928403	99928403	+	RNA	SNP	T	T	C			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	99928403	99928403	T	C	SNP	ENSG00000201913	ENST00000365043	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.023	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000201913	tier1	-	-	35	0	0.00	37	5	11.90
LILRA1	0	genome.wustl.edu	37	19	55107308	55107308	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	55107308	55107308	G	A	SNP	LILRA1	ENST00000251372	human	ensembl	74_37	+1	known	missense	c.866	p.R289H	0.000	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA1	HGNC	ENSG00000104974	tier1	-	-	185	0	0.00	148	41	21.58
ENSG00000232220	0	genome.wustl.edu	37	19	54379104	54379104	+	RNA	DEL	A	A	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	54379104	54379104	A	-	DEL	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			27	0	0.00	36	8	18.18
HPSE2	0	genome.wustl.edu	37	10	100503735	100503735	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	100503735	100503735	C	T	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	missense	c.689	p.R230H	1.000	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	tier1	-	-	56	0	0.00	28	12	30.00
MYO18B	0	genome.wustl.edu	37	22	26247469	26247469	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	22	26247469	26247469	C	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.3808	p.R1270C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	53	0	0.00	72	30	29.41
SSPO	0	genome.wustl.edu	37	7	149480380	149480380	+	RNA	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	149480380	149480380	C	T	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	30	0	0.00	57	9	13.64
RPS27L	0	genome.wustl.edu	37	15	63447932	63447933	+	Splice_Site	INS	-	-	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	15	63447932	63447933	-	A	INS	RPS27L	ENST00000330964	human	ensembl	74_37	-1	known	splice_site_ins	c.116-3_116-2	e3-2	1.000:0.554	-	-	-	no_errors	RPS27L	HGNC	ENSG00000185088	tier1			32	0	0.00	35	6	14.63
GPR50	0	genome.wustl.edu	37	X	150345294	150345294	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	X	150345294	150345294	C	T	SNP	GPR50	ENST00000218316	human	ensembl	74_37	+1	known	missense	c.101	p.A34V	0.649	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mel_rcpt_1X,prints_GPCR_Rhodpsn,prints_Melatonin_rcpt,prints_NPY_rcpt	-	no_errors	GPR50	HGNC	ENSG00000102195	tier1	-	-	71	0	0.00	62	35	36.08
DTHD1	0	genome.wustl.edu	37	4	36295187	36295187	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	36295187	36295187	T	G	SNP	DTHD1	ENST00000456874	human	ensembl	74_37	+1	known	missense	c.883	p.F295V	1.000	NULL	pfam_Death_domain,superfamily_DEATH-like_dom,pfscan_Death_domain	-	no_errors	DTHD1	HGNC	ENSG00000197057	tier1	-	-	67	0	0.00	70	18	20.45
TPR	0	genome.wustl.edu	37	1	186313635	186313635	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	186313635	186313635	G	T	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	missense	c.3289	p.Q1097K	1.000	pfam_TPR_MLP1_2	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	tier1	-	-	50	0	0.00	30	4	11.76
FRG2B	0	genome.wustl.edu	37	10	135439015	135439015	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	135439015	135439015	T	C	SNP	FRG2B	ENST00000425520	human	ensembl	74_37	-1	known	missense	c.425	p.D142G	0.272	NULL	NULL	-	no_errors	FRG2B	HGNC	ENSG00000225899	tier1	rs75470891	-	79	0	0.00	12	5	29.41
MAATS1	0	genome.wustl.edu	37	3	119462955	119462955	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	3	119462955	119462955	G	A	SNP	MAATS1	ENST00000273390	human	ensembl	74_37	+1	known	missense	c.1814	p.R605H	0.994	NULL	superfamily_S-AdoMet_deCO2ase_core	-	no_errors	MAATS1	HGNC	ENSG00000183833	tier1	rs201045322	GMAF=0.0005	21	0	0.00	16	8	33.33
GOT1L1	0	genome.wustl.edu	37	8	37791833	37791834	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	8	37791833	37791834	-	T	INS	GOT1L1	ENST00000307599	human	ensembl	74_37	-1	known	frame_shift_ins	c.1244_1243	p.T415fs	0.000:0.000	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	-	no_errors	GOT1L1	HGNC	ENSG00000169154	tier1			30	0	0.00	43	4	8.51
HCN2	0	genome.wustl.edu	37	19	603785	603785	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	603785	603785	G	A	SNP	HCN2	ENST00000251287	human	ensembl	74_37	+1	known	missense	c.874	p.V292M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN2	HGNC	ENSG00000099822	tier1	-	-	71	0	0.00	56	12	17.65
RSAD1	0	genome.wustl.edu	37	17	48562112	48562112	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	17	48562112	48562112	C	T	SNP	RSAD1	ENST00000258955	human	ensembl	74_37	+1	known	missense	c.1219	p.R407W	1.000	pfam_HemN_C_dom	pfam_HemN_C_dom,pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	-	no_errors	RSAD1	HGNC	ENSG00000136444	tier1	-	-	79	0	0.00	51	25	32.89
UHRF1	0	genome.wustl.edu	37	19	4960773	4960773	+	RNA	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	4960773	4960773	G	A	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	33	0	0.00	49	14	22.22
CERKL	0	genome.wustl.edu	37	2	182403828	182403828	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	182403828	182403828	A	G	SNP	CERKL	ENST00000339098	human	ensembl	74_37	-1	known	missense	c.1607	p.V536A	1.000	NULL	pfam_Diacylglycerol_kinase_cat_dom	-	no_errors	CERKL	HGNC	ENSG00000188452	tier1	-	-	161	0	0.00	28	88	75.86
LOC101927345	0	genome.wustl.edu	37	1	143378850	143378850	+	RNA	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	143378850	143378850	G	T	SNP	LOC101927345	ENST00000423394	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	160	0	0.00	196	24	10.91
ZNF665	0	genome.wustl.edu	37	19	53668216	53668216	+	Silent	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	53668216	53668216	A	G	SNP	ZNF665	ENST00000396424	human	ensembl	74_37	-1	known	silent	c.1527	p.T509	0.405	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF665	HGNC	ENSG00000197497	tier1	-	-	55	0	0.00	90	23	20.35
TRPV5	0	genome.wustl.edu	37	7	142627168	142627168	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	142627168	142627168	A	G	SNP	TRPV5	ENST00000265310	human	ensembl	74_37	-1	known	missense	c.334	p.C112R	0.779	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV5,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV5	HGNC	ENSG00000127412	tier1	-	-	32	0	0.00	19	9	32.14
CNTNAP2	0	genome.wustl.edu	37	7	148080943	148080943	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	7	148080943	148080943	C	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	silent	c.3678	p.S1226	0.004	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1	-	-	42	0	0.00	66	15	18.52
PCDHA6	0	genome.wustl.edu	37	5	140208762	140208762	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	5	140208762	140208762	C	T	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	silent	c.1086	p.D362	0.935	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842	tier1	-	-	70	0	0.00	40	12	23.08
C10orf54	0	genome.wustl.edu	37	10	73521633	73521633	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	73521633	73521633	C	T	SNP	C10orf54	ENST00000394957	human	ensembl	74_37	-1	known	missense	c.233	p.G78D	0.018	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	C10orf54	HGNC	ENSG00000107738	tier1	-	-	24	0	0.00	17	13	43.33
KIR3DX1	0	genome.wustl.edu	37	19	55048149	55048149	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	55048149	55048149	A	C	SNP	KIR3DX1	ENST00000335056	human	ensembl	74_37	+1	known	missense	c.716	p.K239T	0.063	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	47	0	0.00	30	10	25.00
HPSE2	0	genome.wustl.edu	37	10	100242511	100242511	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	100242511	100242511	G	T	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	missense	c.1495	p.L499I	1.000	NULL	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	tier1	-	-	45	0	0.00	34	11	24.44
ANK3	0	genome.wustl.edu	37	10	61834026	61834026	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	61834026	61834026	G	T	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.6613	p.P2205T	0.998	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	34	0	0.00	16	7	30.43
LRP2	0	genome.wustl.edu	37	2	170062573	170062573	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	2	170062573	170062573	C	T	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.7516	p.V2506I	0.815	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	rs199918722	-	18	0	0.00	2	16	88.89
ZNF37A	0	genome.wustl.edu	37	10	38406967	38406967	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	38406967	38406967	A	-	DEL	ZNF37A	ENST00000351773	human	ensembl	74_37	+1	known	frame_shift_del	c.888	p.K297fs	0.714	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF37A	HGNC	ENSG00000075407	tier1			53	0	0.00	19	2	9.52
SNORD3B-2	0	genome.wustl.edu	37	17	18967389	18967390	+	RNA	INS	-	-	ACGTTCAGAGAA			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	17	18967389	18967390	-	ACGTTCAGAGAA	INS	SNORD3B-2	ENST00000364880	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.247:0.254	-	-	-	no_errors	SNORD3B-2	HGNC	ENSG00000262074	tier1			NA	NA	NA	NA	NA	NA
ANKRD62P1-PARP4P3	0	genome.wustl.edu	37	22	17160294	17160294	+	RNA	DEL	T	T	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	22	17160294	17160294	T	-	DEL	ANKRD62P1-PARP4P3	ENST00000338526	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.185	-	-	-	no_errors	ANKRD62P1-PARP4P3	HGNC	ENSG00000189295	tier1			22	0	0.00	12	7	36.84
MMRN2	0	genome.wustl.edu	37	10	88717176	88717176	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	88717176	88717176	C	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	nonsense	c.123	p.W41*	0.002	NULL	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269	tier1	-	-	68	0	0.00	13	15	53.57
ENSG00000226647	0	genome.wustl.edu	37	10	5756021	5756022	+	RNA	INS	-	-	AAA			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	5756021	5756022	-	AAA	INS	ENSG00000226647	ENST00000596567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007:0.000	-	-	-	no_errors	RP11-336A10.2	Clone_based_vega_gene	ENSG00000226647	tier1			42	0	0.00	23	3	11.54
TP53I11	0	genome.wustl.edu	37	11	44925357	44925357	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	44925357	44925357	G	A	SNP	TP53I11	ENST00000354556	human	ensembl	74_37	-1	known	missense	c.419	p.A140V	0.001	NULL	NULL	-	no_errors	TP53I11	HGNC	ENSG00000175274	tier1	-	-	60	0	0.00	64	10	13.51
GALNT18	0	genome.wustl.edu	37	11	11454275	11454275	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	11454275	11454275	A	T	SNP	GALNT18	ENST00000227756	human	ensembl	74_37	-1	known	missense	c.488	p.V163D	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT18	HGNC	ENSG00000110328	tier1	-	-	39	0	0.00	32	5	13.51
PMCHL1	0	genome.wustl.edu	37	5	22142560	22142560	+	RNA	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	5	22142560	22142560	C	T	SNP	PMCHL1	ENST00000418902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	PMCHL1	HGNC	ENSG00000168967	tier1	-	-	86	0	0.00	110	19	14.73
FTMT	0	genome.wustl.edu	37	5	121187750	121187750	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	5	121187750	121187750	G	A	SNP	FTMT	ENST00000321339	human	ensembl	74_37	+1	known	missense	c.92	p.R31H	0.371	NULL	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	-	no_errors	FTMT	HGNC	ENSG00000181867	tier1	-	-	24	0	0.00	14	6	30.00
GUCY2F	0	genome.wustl.edu	37	X	108708524	108708524	+	Silent	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	X	108708524	108708524	G	T	SNP	GUCY2F	ENST00000218006	human	ensembl	74_37	-1	known	silent	c.879	p.T293	0.978	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Haem_no_assoc-bd,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2F	HGNC	ENSG00000101890	tier1	-	-	36	0	0.00	42	25	37.31
TFDP1	0	genome.wustl.edu	37	13	114294576	114294576	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	13	114294576	114294576	C	T	SNP	TFDP1	ENST00000375370	human	ensembl	74_37	+1	known	silent	c.1227	p.D409	0.006	NULL	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP1	HGNC	ENSG00000198176	tier1	-	-	65	0	0.00	69	53	43.44
KCNMA1	0	genome.wustl.edu	37	10	79397243	79397243	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	79397243	79397243	G	A	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.158	p.S53F	0.999	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113	tier1	-	-	27	0	0.00	42	13	23.64
MROH7-TTC4	0	genome.wustl.edu	37	1	55151962	55151962	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	1	55151962	55151962	T	G	SNP	MROH7-TTC4	ENST00000414150	human	ensembl	74_37	+1	known	missense	c.2552	p.V851G	0.997	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH7-TTC4	HGNC	ENSG00000271723	tier1	-	-	31	0	0.00	16	27	62.79
HCAR2	0	genome.wustl.edu	37	12	123187043	123187043	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	123187043	123187043	G	A	SNP	HCAR2	ENST00000328880	human	ensembl	74_37	-1	known	missense	c.788	p.T263M	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	HCAR2	HGNC	ENSG00000182782	tier1	-	-	59	0	0.00	47	10	17.54
KLK15	0	genome.wustl.edu	37	19	51330315	51330315	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	51330315	51330315	C	T	SNP	KLK15	ENST00000598239	human	ensembl	74_37	-1	known	silent	c.300	p.A100	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK15	HGNC	ENSG00000174562	tier1	-	-	45	0	0.00	37	11	22.92
MATK	0	genome.wustl.edu	37	19	3778349	3778349	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	3778349	3778349	G	A	SNP	MATK	ENST00000395045	human	ensembl	74_37	-1	known	silent	c.1359	p.P453	0.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	MATK	HGNC	ENSG00000007264	tier1	-	-	79	0	0.00	11	63	85.14
SEZ6L	0	genome.wustl.edu	37	22	26688611	26688611	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	22	26688611	26688611	G	A	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	missense	c.334	p.A112T	0.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095	tier1	-	-	128	0	0.00	224	28	11.02
LHX5	0	genome.wustl.edu	37	12	113906052	113906052	+	Silent	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	113906052	113906052	G	T	SNP	LHX5	ENST00000261731	human	ensembl	74_37	-1	known	silent	c.555	p.T185	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX5	HGNC	ENSG00000089116	tier1	-	-	41	0	0.00	16	7	30.43
PKHD1	0	genome.wustl.edu	37	6	51747956	51747956	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	6	51747956	51747956	C	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.7285	p.V2429I	1.000	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	rs148284341	-	65	0	0.00	74	17	18.68
COL22A1	0	genome.wustl.edu	37	8	139606332	139606332	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	8	139606332	139606332	C	T	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.4543	p.G1515S	1.000	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	90	0	0.00	39	17	30.36
USP32P1	0	genome.wustl.edu	37	17	16706243	16706243	+	RNA	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	17	16706243	16706243	G	A	SNP	USP32P1	ENST00000341745	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.061	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933	tier1	-	-	67	0	0.00	94	20	17.54
MYO5B	0	genome.wustl.edu	37	18	47431168	47431168	+	Silent	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	18	47431168	47431168	C	T	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	silent	c.2445	p.A815	0.001	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306	tier1	-	-	110	0	0.00	67	18	21.18
GNPTAB	0	genome.wustl.edu	37	12	102142886	102142886	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	12	102142886	102142886	G	A	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.3686	p.A1229V	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1	-	-	34	0	0.00	39	4	9.30
KLF2	0	genome.wustl.edu	37	19	16437824	16437824	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	16437824	16437824	C	T	SNP	KLF2	ENST00000592003	human	ensembl	74_37	+1	putative	missense	c.233	p.T78I	1.000	NULL	NULL	-	no_errors	KLF2	HGNC	ENSG00000127528	tier1	-	-	55	0	0.00	74	16	17.78
TBC1D7	0	genome.wustl.edu	37	6	13307950	13307950	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	6	13307950	13307950	G	T	SNP	TBC1D7	ENST00000356436	human	ensembl	74_37	-1	known	missense	c.547	p.L183M	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D7	HGNC	ENSG00000145979	tier1	-	-	39	0	0.00	33	4	10.81
VASN	0	genome.wustl.edu	37	16	4431389	4431391	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	16	4431389	4431391	CTG	-	DEL	VASN	ENST00000304735	human	ensembl	74_37	+1	known	in_frame_del	c.511_513	p.L174in_frame_del	1.000:1.000:1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	VASN	HGNC	ENSG00000168140	tier1			24	0	0.00	16	3	15.79
ARAP2	0	genome.wustl.edu	37	4	36212335	36212335	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	36212335	36212335	G	A	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	silent	c.1164	p.S388	0.810	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	21	0	0.00	13	12	48.00
CLEC3A	0	genome.wustl.edu	37	16	78064763	78064763	+	RNA	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	16	78064763	78064763	G	T	SNP	CLEC3A	ENST00000565808	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.578	-	-	-	no_errors	CLEC3A	HGNC	ENSG00000166509	tier1	-	-	47	0	0.00	30	19	38.78
MYBPC3	0	genome.wustl.edu	37	11	47372888	47372888	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	47372888	47372888	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	missense	c.194	p.T65M	0.997	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	39	0	0.00	26	4	13.33
ERVV-2	0	genome.wustl.edu	37	19	53553299	53553299	+	Silent	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	19	53553299	53553299	G	T	SNP	ERVV-2	ENST00000601417	human	ensembl	74_37	+1	known	silent	c.795	p.L265	0.010	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVV-2	HGNC	ENSG00000268964	tier1	-	-	100	0	0.00	113	15	11.72
ING2	0	genome.wustl.edu	37	4	184431445	184431445	+	Silent	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	4	184431445	184431445	G	A	SNP	ING2	ENST00000302327	human	ensembl	74_37	+1	known	silent	c.183	p.K61	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING2	HGNC	ENSG00000168556	tier1	-	-	36	0	0.00	19	22	52.38
KCNG4	0	genome.wustl.edu	37	16	84270517	84270517	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	16	84270517	84270517	C	T	SNP	KCNG4	ENST00000308251	human	ensembl	74_37	-1	known	missense	c.575	p.R192H	0.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG4	HGNC	ENSG00000168418	tier1	-	-	89	0	0.00	23	18	41.86
SF1	0	genome.wustl.edu	37	11	64532898	64532898	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	64532898	64532898	C	T	SNP	SF1	ENST00000334944	human	ensembl	74_37	-1	known	missense	c.1880	p.R627H	1.000	NULL	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066	tier1	-	-	55	0	0.00	45	13	22.41
VRTN	0	genome.wustl.edu	37	14	74823735	74823735	+	Silent	SNP	C	C	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	14	74823735	74823735	C	A	SNP	VRTN	ENST00000256362	human	ensembl	74_37	+1	known	silent	c.249	p.G83	0.967	NULL	pfam_Transposase_8	-	no_errors	VRTN	HGNC	ENSG00000133980	tier1	-	-	15	0	0.00	16	9	34.62
OR4C5	0	genome.wustl.edu	37	11	48387926	48387926	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	11	48387926	48387926	G	A	SNP	OR4C5	ENST00000319813	human	ensembl	74_37	-1	known	missense	c.92	p.T31M	0.963	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C5	HGNC	ENSG00000176540	tier1	-	-	68	0	0.00	57	14	19.72
KCNMA1	0	genome.wustl.edu	37	10	79397225	79397225	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YR-01A-33D-A351-09	TCGA-DX-A6YR-10B-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0851f971-c95c-4c39-8390-f62598885c5a	f97fc91e-8830-4217-9c02-02531bdffc59	10	79397225	79397225	G	T	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.176	p.S59Y	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113	tier1	-	-	37	0	0.00	47	15	24.19
