Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
COPS4	0	genome.wustl.edu	37	4	83966800	83966800	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	4	83966800	83966800	A	G	SNP	COPS4	ENST00000507376	human	ensembl	74_37	+1	known	missense	c.125	p.K42R	1.000	NULL	NULL	-	no_errors	COPS4	HGNC	ENSG00000138663	tier1	-	-	103	0	0.00	40	4	9.09
FUT11	0	genome.wustl.edu	37	10	75535408	75535408	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	10	75535408	75535408	C	A	SNP	FUT11	ENST00000372841	human	ensembl	74_37	+1	known	missense	c.1444	p.L482I	1.000	pirsf_Alpha-1_3-FUT_met	pfam_Glyco_trans_10,pirsf_Alpha-1_3-FUT_met	-	no_errors	FUT11	HGNC	ENSG00000196968	tier1	-	-	41	0	0.00	27	4	12.90
PDE12	0	genome.wustl.edu	37	3	57545573	57545573	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	57545573	57545573	G	T	SNP	PDE12	ENST00000311180	human	ensembl	74_37	+1	known	nonsense	c.1672	p.G558*	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	PDE12	HGNC	ENSG00000174840	tier1	-	-	43	0	0.00	18	3	14.29
PDE10A	0	genome.wustl.edu	37	6	165749697	165749697	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	6	165749697	165749697	C	A	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	missense	c.2182	p.G728W	0.253	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541	tier1	-	-	42	0	0.00	29	4	12.12
C3orf72	0	genome.wustl.edu	37	3	138668445	138668445	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	138668445	138668445	C	A	SNP	C3orf72	ENST00000383165	human	ensembl	74_37	+1	known	missense	c.184	p.H62N	0.000	NULL	NULL	-	no_errors	C3orf72	HGNC	ENSG00000206262	tier1	-	-	59	0	0.00	38	4	9.52
DSCAML1	0	genome.wustl.edu	37	11	117351251	117351251	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	117351251	117351251	C	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.2872	p.V958L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	68	0	0.00	33	4	10.81
RNFT2	0	genome.wustl.edu	37	12	117289549	117289549	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	117289549	117289549	A	-	DEL	RNFT2	ENST00000319176	human	ensembl	74_37	+1	putative	frame_shift_del	c.766	p.K259fs	0.003	NULL	NULL	-	no_errors	RNFT2	HGNC	ENSG00000135119	tier1			21	0	0.00	5	3	37.50
SEZ6L	0	genome.wustl.edu	37	22	26695005	26695005	+	Silent	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	22	26695005	26695005	G	T	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.1218	p.V406	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095	tier1	-	-	30	0	0.00	12	3	20.00
ALG3	0	genome.wustl.edu	37	3	183960417	183960417	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	183960417	183960417	G	T	SNP	ALG3	ENST00000397676	human	ensembl	74_37	-1	known	missense	c.1202	p.S401Y	1.000	pfam_Glycosyltransferase_ALG3	pfam_Glycosyltransferase_ALG3	-	no_errors	ALG3	HGNC	ENSG00000214160	tier1	-	-	45	0	0.00	19	3	13.64
DCLK2	0	genome.wustl.edu	37	4	151000434	151000434	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	4	151000434	151000434	G	T	SNP	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	missense	c.255	p.K85N	1.000	smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390	tier1	-	-	60	0	0.00	27	4	12.90
PEX7	0	genome.wustl.edu	37	6	137146370	137146370	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	6	137146370	137146370	T	C	SNP	PEX7	ENST00000318471	human	ensembl	74_37	+1	known	missense	c.149	p.I50T	0.015	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PEX7	HGNC	ENSG00000112357	tier1	-	-	124	0	0.00	58	26	30.95
UGDH	0	genome.wustl.edu	37	4	39505572	39505584	+	Frame_Shift_Del	DEL	GCATTTTTTTATG	GCATTTTTTTATG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	GCATTTTTTTATG	GCATTTTTTTATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	4	39505572	39505584	GCATTTTTTTATG	-	DEL	UGDH	ENST00000316423	human	ensembl	74_37	-1	known	frame_shift_del	c.1297_1285	p.H429fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000	pfam_UDP-Glc/GDP-Man_DH_C,superfamily_UDP-Glc/GDP-Man_DH_C,tigrfam_UDP-Glc/GDP-Man	pfam_UDP-Glc/GDP-Man_DH_N,pfam_UDP-Glc/GDP-Man_DH_C,pfam_UDP-Glc/GDP-Man_DH_dimer,superfamily_UDP-Glc/GDP-Man_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_UDP-Glc/GDP-Man	-	no_errors	UGDH	HGNC	ENSG00000109814	tier1			NA	NA	NA	NA	NA	NA
FRMPD3	0	genome.wustl.edu	37	X	106846478	106846480	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	X	106846478	106846480	CAG	-	DEL	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	in_frame_del	c.5308_5310	p.Q1773in_frame_del	0.517:0.515:0.516	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1			78	0	0.00	24	3	11.11
NF1	0	genome.wustl.edu	37	17	29663696	29663696	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	29663696	29663696	C	A	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	missense	c.6191	p.S2064Y	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	tier1	-	-	62	0	0.00	40	4	9.09
ZNF425	0	genome.wustl.edu	37	7	148802643	148802643	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	148802643	148802643	G	T	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	missense	c.320	p.P107H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	tier1	-	-	47	0	0.00	16	3	15.79
LRRN4CL	0	genome.wustl.edu	37	11	62455864	62455864	+	Silent	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	62455864	62455864	C	T	SNP	LRRN4CL	ENST00000317449	human	ensembl	74_37	-1	known	silent	c.117	p.A39	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LRRN4CL	HGNC	ENSG00000177363	tier1	-	-	73	0	0.00	27	4	12.90
WDR34	0	genome.wustl.edu	37	9	131398646	131398646	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	9	131398646	131398646	C	T	SNP	WDR34	ENST00000372715	human	ensembl	74_37	-1	known	missense	c.617	p.R206H	0.863	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR34	HGNC	ENSG00000119333	tier1	-	-	97	0	0.00	55	15	21.43
CHD7	0	genome.wustl.edu	37	8	61769387	61769387	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	8	61769387	61769387	G	A	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	silent	c.7548	p.R2516	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	tier1	-	-	19	0	0.00	21	6	22.22
IGFN1	0	genome.wustl.edu	37	1	201196039	201196039	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	201196039	201196039	C	T	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.10816	p.R3606W	0.019	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	-	-	51	0	0.00	27	6	18.18
FURIN	0	genome.wustl.edu	37	15	91421487	91421489	+	In_Frame_Del	DEL	GGG	GGG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	GGG	GGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	15	91421487	91421489	GGG	-	DEL	FURIN	ENST00000268171	human	ensembl	74_37	+1	known	in_frame_del	c.793_795	p.G265in_frame_del	1.000:1.000:0.996	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,prints_Peptidase_S8_subtilisin-rel	-	no_errors	FURIN	HGNC	ENSG00000140564	tier1			125	0	0.00	42	7	14.29
PPP1R12C	0	genome.wustl.edu	37	19	55610363	55610363	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	55610363	55610363	G	C	SNP	PPP1R12C	ENST00000263433	human	ensembl	74_37	-1	known	missense	c.832	p.L278V	0.997	pirsf_Pase-1_reg_su_12A/B/C_euk,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pirsf_Pase-1_reg_su_12A/B/C_euk,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12C	HGNC	ENSG00000125503	tier1	-	-	65	0	0.00	40	6	13.04
PANX1	0	genome.wustl.edu	37	11	93913360	93913360	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	93913360	93913360	G	A	SNP	PANX1	ENST00000227638	human	ensembl	74_37	+1	known	missense	c.1138	p.G380S	0.999	pfscan_Innexin	pfam_Innexin,pfscan_Innexin	-	no_errors	PANX1	HGNC	ENSG00000110218	tier1	-	-	49	0	0.00	19	7	26.92
RBM4B	0	genome.wustl.edu	37	11	66436591	66436591	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	66436591	66436591	C	-	DEL	RBM4B	ENST00000310046	human	ensembl	74_37	-1	known	frame_shift_del	c.584	p.G195fs	1.000	NULL	pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	RBM4B	HGNC	ENSG00000173914	tier1			43	0	0.00	12	2	14.29
THNSL2	0	genome.wustl.edu	37	2	88484878	88484878	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	88484878	88484878	C	A	SNP	THNSL2	ENST00000324166	human	ensembl	74_37	+1	known	nonsense	c.1109	p.S370*	0.075	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	-	no_errors	THNSL2	HGNC	ENSG00000144115	tier1	-	-	41	0	0.00	33	4	10.81
TP53	0	genome.wustl.edu	37	17	7578553	7578553	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	7578553	7578553	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.377	p.Y126C	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	23	0	0.00	4	4	50.00
SUMF2	0	genome.wustl.edu	37	7	56147316	56147316	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	56147316	56147316	G	A	SNP	SUMF2	ENST00000342190	human	ensembl	74_37	+1	known	missense	c.829	p.G277S	0.000	NULL	pfam_FGE_dom,superfamily_C-type_lectin_fold	-	no_errors	SUMF2	HGNC	ENSG00000129103	tier1	-	-	74	0	0.00	44	10	18.52
FRMPD3	0	genome.wustl.edu	37	X	106843718	106843718	+	Silent	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	X	106843718	106843718	C	A	SNP	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	silent	c.2548	p.R850	0.995	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1	-	-	43	0	0.00	9	3	25.00
COL5A3	0	genome.wustl.edu	37	19	10104349	10104349	+	Splice_Site	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	10104349	10104349	C	A	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	splice_site	c.1642-1	e18-1	1.000	-	-	-	no_errors	COL5A3	HGNC	ENSG00000080573	tier1	-	-	92	0	0.00	40	4	8.89
KREMEN1	0	genome.wustl.edu	37	22	29490359	29490359	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	22	29490359	29490359	C	A	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.211	p.L71M	1.000	pirsf_Kremen,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762	tier1	-	-	82	0	0.00	44	4	8.16
FICD	0	genome.wustl.edu	37	12	108912292	108912292	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	108912292	108912292	C	A	SNP	FICD	ENST00000552695	human	ensembl	74_37	+1	known	missense	c.417	p.F139L	0.541	pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_Fido,superfamily_Fido,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	FICD	HGNC	ENSG00000198855	tier1	-	-	94	0	0.00	41	4	8.89
FGD3	0	genome.wustl.edu	37	9	95768364	95768364	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	9	95768364	95768364	T	C	SNP	FGD3	ENST00000337352	human	ensembl	74_37	+1	known	missense	c.739	p.Y247H	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,superfamily_Znf_FYVE_PHD,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD3	HGNC	ENSG00000127084	tier1	-	-	80	0	0.00	57	8	12.31
NT5DC4	0	genome.wustl.edu	37	2	113484278	113484278	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	113484278	113484278	A	G	SNP	NT5DC4	ENST00000327581	human	ensembl	74_37	+1	novel	missense	c.1133	p.E378G	0.160	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5DC4	HGNC	ENSG00000144130	tier1	-	-	64	0	0.00	38	11	22.45
MGAM	0	genome.wustl.edu	37	7	141778612	141778612	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	141778612	141778612	C	G	SNP	MGAM	ENST00000475668	human	ensembl	74_37	+1	putative	missense	c.5651	p.S1884C	0.011	pfam_P_trefoil,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	25	0	0.00	6	16	72.73
IRX4	0	genome.wustl.edu	37	5	1881171	1881183	+	RNA	DEL	CGGTGGGGGGGGG	CGGTGGGGGGGGG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	CGGTGGGGGGGGG	CGGTGGGGGGGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	5	1881171	1881183	CGGTGGGGGGGGG	-	DEL	IRX4	ENST00000505938	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.002:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.003:0.003:0.001	-	-	-	no_errors	IRX4	HGNC	ENSG00000113430	tier1			NA	NA	NA	NA	NA	NA
AGFG1	0	genome.wustl.edu	37	2	228389621	228389621	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	228389621	228389621	C	A	SNP	AGFG1	ENST00000409979	human	ensembl	74_37	+1	known	missense	c.684	p.N228K	1.000	NULL	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGFG1	HGNC	ENSG00000173744	tier1	-	-	68	0	0.00	19	4	17.39
CBL	0	genome.wustl.edu	37	11	119149356	119149358	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	119149356	119149358	ATG	-	DEL	CBL	ENST00000264033	human	ensembl	74_37	+1	known	in_frame_del	c.1364_1366	p.D459in_frame_del	1.000:0.995:1.000	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	tier1			38	0	0.00	16	3	15.79
CCL2	0	genome.wustl.edu	37	17	32583311	32583311	+	Silent	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	32583311	32583311	G	T	SNP	CCL2	ENST00000225831	human	ensembl	74_37	+1	known	silent	c.147	p.A49	0.136	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL2	HGNC	ENSG00000108691	tier1	-	-	39	0	0.00	26	4	13.33
DOCK3	0	genome.wustl.edu	37	3	51264843	51264843	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	51264843	51264843	T	C	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.1507	p.S503P	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	33	0	0.00	23	4	13.79
AGXT	0	genome.wustl.edu	37	2	241808604	241808604	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	241808604	241808604	G	T	SNP	AGXT	ENST00000307503	human	ensembl	74_37	+1	known	missense	c.183	p.K61N	0.890	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT	HGNC	ENSG00000172482	tier1	-	-	45	0	0.00	6	3	33.33
ACAD9	0	genome.wustl.edu	37	3	128627900	128627900	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	128627900	128627900	G	-	DEL	ACAD9	ENST00000308982	human	ensembl	74_37	+1	known	frame_shift_del	c.1443	p.L483fs	0.997	NULL	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACAD9	HGNC	ENSG00000177646	tier1			38	0	0.00	12	2	14.29
THAP3	0	genome.wustl.edu	37	1	6688526	6688526	+	RNA	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	6688526	6688526	G	T	SNP	THAP3	ENST00000484676	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	THAP3	HGNC	ENSG00000041988	tier1	-	-	60	0	0.00	41	4	8.89
VEPH1	0	genome.wustl.edu	37	3	157081226	157081227	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	157081226	157081227	-	T	INS	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	frame_shift_ins	c.1662_1661	p.N554fs	1.000:1.000	NULL	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415	tier1			27	0	0.00	23	2	8.00
SHANK3	0	genome.wustl.edu	37	22	51143505	51143505	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	22	51143505	51143505	G	-	DEL	SHANK3	ENST00000262795	human	ensembl	74_37	+1	known	frame_shift_del	c.2058	p.D687fs	0.791	NULL	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC	ENSG00000251322	tier1			53	0	0.00	7	2	22.22
C5orf42	0	genome.wustl.edu	37	5	37206408	37206408	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	5	37206408	37206408	G	-	DEL	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	frame_shift_del	c.3040	p.L1014fs	1.000	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603	tier1			78	0	0.00	79	15	15.96
NPLOC4	0	genome.wustl.edu	37	17	79575877	79575877	+	RNA	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	79575877	79575877	G	T	SNP	NPLOC4	ENST00000570300	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	NPLOC4	HGNC	ENSG00000182446	tier1	-	-	56	0	0.00	29	4	12.12
XRRA1	0	genome.wustl.edu	37	11	74554931	74554931	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	74554931	74554931	C	A	SNP	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	missense	c.2093	p.R698L	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1	-	-	75	0	0.00	45	4	8.16
ZNF208	0	genome.wustl.edu	37	19	22156134	22156134	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	22156134	22156134	G	T	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.1702	p.L568I	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	36	0	0.00	35	8	18.60
PIGZ	0	genome.wustl.edu	37	3	196675189	196675189	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	196675189	196675189	G	T	SNP	PIGZ	ENST00000443835	human	ensembl	74_37	-1	putative	missense	c.269	p.P90H	0.845	NULL	pfam_GPI_mannosylTrfase	-	no_errors	PIGZ	HGNC	ENSG00000119227	tier1	-	-	78	0	0.00	38	4	9.52
NARFL	0	genome.wustl.edu	37	16	789597	789597	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	789597	789597	G	T	SNP	NARFL	ENST00000570289	human	ensembl	74_37	-1	known	missense	c.208	p.P70T	0.000	NULL	NULL	-	no_errors	NARFL	HGNC	ENSG00000103245	tier1	-	-	29	0	0.00	20	4	16.67
PKHD1L1	0	genome.wustl.edu	37	8	110477410	110477410	+	Silent	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	8	110477410	110477410	G	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.8349	p.P2783	0.032	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	41	0	0.00	47	5	9.62
HLA-DRB6	0	genome.wustl.edu	37	6	32521699	32521699	+	RNA	SNP	C	C	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	6	32521699	32521699	C	G	SNP	HLA-DRB6	ENST00000411500	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.376	-	-	-	no_errors	HLA-DRB6	HGNC	ENSG00000229391	tier1	-	-	67	0	0.00	17	69	79.31
SLC15A5	0	genome.wustl.edu	37	12	16392681	16392681	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	16392681	16392681	G	T	SNP	SLC15A5	ENST00000344941	human	ensembl	74_37	-1	novel	missense	c.1096	p.L366M	0.049	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC15A5	HGNC	ENSG00000188991	tier1	-	-	93	0	0.00	29	4	12.12
NME6	0	genome.wustl.edu	37	3	48339991	48339991	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	48339991	48339991	G	-	DEL	NME6	ENST00000421967	human	ensembl	74_37	-1	known	frame_shift_del	c.40	p.R14fs	0.541	NULL	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	-	no_errors	NME6	HGNC	ENSG00000172113	tier1			52	0	0.00	14	2	12.50
TECPR2	0	genome.wustl.edu	37	14	102904421	102904421	+	Silent	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	14	102904421	102904421	C	A	SNP	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	silent	c.2457	p.S819	0.019	NULL	pfam_Beta-propeller_rpt_TECPR,superfamily_WD40_repeat_dom,superfamily_RCC1/BLIP-II,smart_WD40_repeat,smart_Beta-propeller_rpt_TECPR	-	no_errors	TECPR2	HGNC	ENSG00000196663	tier1	-	-	47	0	0.00	15	3	16.67
ACP1	0	genome.wustl.edu	37	2	272129	272129	+	Silent	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	272129	272129	C	T	SNP	ACP1	ENST00000272065	human	ensembl	74_37	+1	known	silent	c.210	p.P70	1.000	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml,prints_Tyr_phospatase/Ars_reductase	-	no_errors	ACP1	HGNC	ENSG00000143727	tier1	-	-	80	0	0.00	32	4	11.11
BAI1	0	genome.wustl.edu	37	8	143570413	143570413	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	8	143570413	143570413	G	A	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.2470	p.V824M	0.997	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	86	0	0.00	39	7	15.22
PHKG1	0	genome.wustl.edu	37	7	56155339	56155339	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	56155339	56155339	G	T	SNP	PHKG1	ENST00000452681	human	ensembl	74_37	-1	known	missense	c.214	p.L72M	0.733	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma	-	no_errors	PHKG1	HGNC	ENSG00000164776	tier1	-	-	40	0	0.00	33	4	10.81
TRAF3IP3	0	genome.wustl.edu	37	1	209955427	209955427	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	209955427	209955427	G	A	SNP	TRAF3IP3	ENST00000477431	human	ensembl	74_37	+1	putative	missense	c.424	p.A142T	0.079	NULL	pfam_Leu_zip_homeo	-	no_errors	TRAF3IP3	HGNC	ENSG00000009790	tier1	-	-	71	0	0.00	40	7	14.89
DNAH8	0	genome.wustl.edu	37	6	38998064	38998064	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	6	38998064	38998064	A	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.13369	p.R4457G	0.016	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	60	0	0.00	46	4	8.00
MRGPRX4	0	genome.wustl.edu	37	11	18195201	18195201	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	18195201	18195201	G	A	SNP	MRGPRX4	ENST00000314254	human	ensembl	74_37	+1	known	missense	c.398	p.R133H	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX4	HGNC	ENSG00000179817	tier1	-	-	28	0	0.00	6	7	53.85
FAM217B	0	genome.wustl.edu	37	20	58519635	58519635	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	20	58519635	58519635	G	T	SNP	FAM217B	ENST00000358293	human	ensembl	74_37	+1	known	missense	c.637	p.G213W	0.051	NULL	NULL	-	no_errors	FAM217B	HGNC	ENSG00000196227	tier1	-	-	66	0	0.00	39	6	13.33
LRP2	0	genome.wustl.edu	37	2	170009390	170009390	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	170009390	170009390	C	T	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.12380	p.R4127H	0.272	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	rs142934522	-	57	0	0.00	30	17	36.17
PITX3	0	genome.wustl.edu	37	10	103991442	103991443	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	10	103991442	103991443	TG	-	DEL	PITX3	ENST00000370002	human	ensembl	74_37	-1	known	frame_shift_del	c.224_223	p.Q75fs	1.000:1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX3	HGNC	ENSG00000107859	tier1			55	0	0.00	17	2	10.53
NDOR1	0	genome.wustl.edu	37	9	140108673	140108673	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	9	140108673	140108673	C	A	SNP	NDOR1	ENST00000371521	human	ensembl	74_37	+1	known	missense	c.530	p.T177N	0.482	superfamily_Riboflavin_synthase-like_b-brl	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NDOR1	HGNC	ENSG00000188566	tier1	-	-	45	0	0.00	28	4	12.50
MACF1	0	genome.wustl.edu	37	1	39800992	39800992	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	39800992	39800992	A	-	DEL	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	frame_shift_del	c.8843	p.A2950fs	0.536	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			56	0	0.00	23	2	8.00
MMP2	0	genome.wustl.edu	37	16	55518075	55518075	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	55518075	55518075	G	T	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	missense	c.528	p.W176C	1.000	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245	tier1	-	-	64	0	0.00	35	4	10.26
YWHAQ	0	genome.wustl.edu	37	2	9770428	9770428	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	9770428	9770428	C	T	SNP	YWHAQ	ENST00000238081	human	ensembl	74_37	-1	known	missense	c.154	p.V52I	1.000	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAQ	HGNC	ENSG00000134308	tier1	-	-	42	0	0.00	13	3	18.75
ACTB	0	genome.wustl.edu	37	7	5567794	5567808	+	In_Frame_Del	DEL	GTGGATGCCACAGGA	GTGGATGCCACAGGA	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	GTGGATGCCACAGGA	GTGGATGCCACAGGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	5567794	5567808	GTGGATGCCACAGGA	-	DEL	ACTB	ENST00000331789	human	ensembl	74_37	-1	known	in_frame_del	c.825_811	p.SCGIH271in_frame_del	0.895:1.000:1.000:1.000:1.000:1.000:0.993:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTB	HGNC	ENSG00000075624	tier1			NA	NA	NA	NA	NA	NA
PLXNB1	0	genome.wustl.edu	37	3	48462153	48462153	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	48462153	48462153	C	A	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	missense	c.1949	p.G650V	1.000	superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1	-	-	84	0	0.00	37	4	9.76
LUZP2	0	genome.wustl.edu	37	11	24750765	24750765	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	11	24750765	24750765	G	A	SNP	LUZP2	ENST00000336930	human	ensembl	74_37	+1	known	missense	c.113	p.R38Q	1.000	NULL	NULL	-	no_errors	LUZP2	HGNC	ENSG00000187398	tier1	-	-	38	0	0.00	20	9	31.03
RTL1	0	genome.wustl.edu	37	14	101350508	101350508	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	14	101350508	101350508	G	A	SNP	RTL1	ENST00000534062	human	ensembl	74_37	-1	known	silent	c.618	p.F206	0.694	NULL	pfam_Retrotrans_gag_dom,superfamily_Peptidase_aspartic_dom	-	no_errors	RTL1	HGNC	ENSG00000254656	tier1	-	-	41	0	0.00	6	11	64.71
TRIM67	0	genome.wustl.edu	37	1	231342468	231342468	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	231342468	231342468	G	T	SNP	TRIM67	ENST00000366652	human	ensembl	74_37	+1	known	missense	c.1751	p.R584L	1.000	pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM67	HGNC	ENSG00000119283	tier1	-	-	51	0	0.00	24	4	14.29
SLC24A1	0	genome.wustl.edu	37	15	65916825	65916825	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	15	65916825	65916825	G	T	SNP	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	missense	c.407	p.G136V	0.000	tigrfam_K-dep_Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621	tier1	-	-	66	0	0.00	34	4	10.53
SRGAP3	0	genome.wustl.edu	37	3	9101969	9101969	+	Silent	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	9101969	9101969	G	T	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	silent	c.747	p.A249	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP3	HGNC	ENSG00000196220	tier1	-	-	88	0	0.00	40	12	23.08
PPP1R12B	0	genome.wustl.edu	37	1	202407189	202407190	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	202407189	202407190	-	T	INS	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_ins	c.1495_1496	p.F503fs	0.085:0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1			45	0	0.00	24	5	17.24
CNDP1	0	genome.wustl.edu	37	18	72238471	72238471	+	Silent	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	18	72238471	72238471	T	C	SNP	CNDP1	ENST00000358821	human	ensembl	74_37	+1	known	silent	c.807	p.L269	0.000	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP1	HGNC	ENSG00000150656	tier1	-	-	43	0	0.00	14	7	33.33
RNF213	0	genome.wustl.edu	37	17	78264516	78264516	+	Silent	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	78264516	78264516	G	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	silent	c.1260	p.L420	0.870	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	71	0	0.00	29	4	12.12
TMEM52	0	genome.wustl.edu	37	1	1849499	1849499	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	1849499	1849499	G	T	SNP	TMEM52	ENST00000310991	human	ensembl	74_37	-1	known	missense	c.452	p.P151Q	0.032	NULL	NULL	-	no_errors	TMEM52	HGNC	ENSG00000178821	tier1	-	-	65	0	0.00	34	4	10.53
GPR173	0	genome.wustl.edu	37	X	53106448	53106448	+	Silent	SNP	C	C	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	X	53106448	53106448	C	G	SNP	GPR173	ENST00000332582	human	ensembl	74_37	+1	known	silent	c.645	p.R215	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR173	HGNC	ENSG00000184194	tier1	-	-	38	0	0.00	14	21	60.00
ZNF821	0	genome.wustl.edu	37	16	71898846	71898846	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	71898846	71898846	G	T	SNP	ZNF821	ENST00000425432	human	ensembl	74_37	-1	known	missense	c.272	p.T91K	0.995	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF821	HGNC	ENSG00000102984	tier1	-	-	76	0	0.00	37	4	9.76
LAMA3	0	genome.wustl.edu	37	18	21441699	21441699	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	18	21441699	21441699	G	A	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	silent	c.4512	p.A1504	0.001	superfamily_Growth_fac_rcpt_N_dom,pfscan_Laminin_B_type_IV	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747	tier1	-	-	29	0	0.00	13	4	23.53
CNTD1	0	genome.wustl.edu	37	17	40961674	40961674	+	RNA	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	40961674	40961674	C	A	SNP	CNTD1	ENST00000315066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	CNTD1	HGNC	ENSG00000176563	tier1	-	-	41	0	0.00	19	3	13.64
SIDT1	0	genome.wustl.edu	37	3	113342518	113342518	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	113342518	113342518	G	A	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	missense	c.2260	p.A754T	0.995	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858	tier1	-	-	37	0	0.00	16	3	15.79
DAO	0	genome.wustl.edu	37	12	109277522	109277522	+	RNA	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	109277522	109277522	G	A	SNP	DAO	ENST00000548052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DAO	HGNC	ENSG00000110887	tier1	-	-	34	0	0.00	19	8	29.63
ENSG00000221126	0	genome.wustl.edu	37	1	30117426	30117426	+	RNA	SNP	A	A	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	30117426	30117426	A	T	SNP	ENSG00000221126	ENST00000408199	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.101	-	-	-	no_errors	AC092265.1	Clone_based_ensembl_gene	ENSG00000221126	tier1	-	-	109	0	0.00	65	18	21.69
ACP1	0	genome.wustl.edu	37	2	272100	272100	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	272100	272100	C	A	SNP	ACP1	ENST00000272065	human	ensembl	74_37	+1	known	missense	c.181	p.Q61K	1.000	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_phospatase/Ars_reductase	pfam_Ptyr_pPase_SF,superfamily_Ptyr_pPase_SF,smart_Ptyr_pPase_SF,prints_Tyr_Pase_low_mol_wt_mml,prints_Tyr_phospatase/Ars_reductase	-	no_errors	ACP1	HGNC	ENSG00000143727	tier1	-	-	90	0	0.00	41	4	8.89
FAM194B	0	genome.wustl.edu	37	13	46135548	46135548	+	Nonsense_Mutation	SNP	T	T	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	13	46135548	46135548	T	A	SNP	FAM194B	ENST00000298738	human	ensembl	74_37	-1	known	nonsense	c.1363	p.K455*	0.081	NULL	NULL	-	no_errors	FAM194B	HGNC	ENSG00000165837	tier1	-	-	52	0	0.00	36	9	19.57
KIAA2026	0	genome.wustl.edu	37	9	5968043	5968044	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	9	5968043	5968044	-	T	INS	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	frame_shift_ins	c.2188_2187	p.A729fs	1.000:1.000	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354	tier1			41	0	0.00	23	2	8.00
RPGRIP1L	0	genome.wustl.edu	37	16	53675388	53675388	+	Splice_Site	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	53675388	53675388	C	A	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	splice_site	c.2684-1	e17-1	1.000	-	-	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494	tier1	-	-	44	0	0.00	24	3	11.11
PCDH10	0	genome.wustl.edu	37	4	134073569	134073571	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	4	134073569	134073571	CTG	-	DEL	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	in_frame_del	c.2274_2276	p.C762in_frame_del	0.999:1.000:1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1			40	0	0.00	16	3	15.79
FAM78B	0	genome.wustl.edu	37	1	166135346	166135346	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	166135346	166135346	G	T	SNP	FAM78B	ENST00000338353	human	ensembl	74_37	-1	known	missense	c.140	p.P47H	1.000	NULL	NULL	-	no_errors	FAM78B	HGNC	ENSG00000188859	tier1	-	-	66	0	0.00	25	4	13.79
CCDC66	0	genome.wustl.edu	37	3	56591278	56591279	+	Frame_Shift_Ins	INS	-	-	GGGGTAAGCA			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	56591278	56591279	-	GGGGTAAGCA	INS	CCDC66	ENST00000394672	human	ensembl	74_37	+1	known	frame_shift_ins	c.8_9	p.D5fs	1.000:1.000	NULL	NULL	-	no_errors	CCDC66	HGNC	ENSG00000180376	tier1			NA	NA	NA	NA	NA	NA
FAM9B	0	genome.wustl.edu	37	X	8993603	8993603	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	X	8993603	8993603	G	A	SNP	FAM9B	ENST00000327220	human	ensembl	74_37	-1	known	missense	c.514	p.L172F	0.000	pfam_Cor1/Xlr/Xmr	pfam_Cor1/Xlr/Xmr	-	no_errors	FAM9B	HGNC	ENSG00000177138	tier1	-	-	191	0	0.00	168	38	18.45
ARHGEF40	0	genome.wustl.edu	37	14	21542353	21542353	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	14	21542353	21542353	A	G	SNP	ARHGEF40	ENST00000298694	human	ensembl	74_37	+1	known	missense	c.464	p.K155R	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF40	HGNC	ENSG00000165801	tier1	-	-	53	0	0.00	28	7	20.00
NCOR2	0	genome.wustl.edu	37	12	124824721	124824722	+	In_Frame_Ins	INS	-	-	GCCGCTGCT			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	124824721	124824722	-	GCCGCTGCT	INS	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	in_frame_ins	c.5539_5538	p.1846in_frame_insSSG	1.000:0.999	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1			NA	NA	NA	NA	NA	NA
PUF60	0	genome.wustl.edu	37	8	144898811	144898811	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	8	144898811	144898811	G	T	SNP	PUF60	ENST00000526683	human	ensembl	74_37	-1	known	missense	c.1559	p.S520Y	1.000	smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PolyU-bd	-	no_errors	PUF60	HGNC	ENSG00000179950	tier1	-	-	80	0	0.00	46	4	8.00
ROS1	0	genome.wustl.edu	37	6	117662358	117662358	+	Silent	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	6	117662358	117662358	T	C	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	silent	c.5019	p.Q1673	0.596	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936	tier1	-	-	53	0	0.00	57	40	41.24
OR1D2	0	genome.wustl.edu	37	17	2996238	2996238	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	2996238	2996238	G	T	SNP	OR1D2	ENST00000331459	human	ensembl	74_37	-1	known	nonsense	c.53	p.S18*	0.012	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1D2	HGNC	ENSG00000184166	tier1	-	-	49	0	0.00	40	4	9.09
GRIP1	0	genome.wustl.edu	37	12	66770956	66770956	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	66770956	66770956	C	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	nonsense	c.2731	p.E911*	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974	tier1	-	-	63	0	0.00	21	4	16.00
KLK8	0	genome.wustl.edu	37	19	51499377	51499377	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	51499377	51499377	C	T	SNP	KLK8	ENST00000391806	human	ensembl	74_37	-1	known	missense	c.856	p.V286I	0.962	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK8	HGNC	ENSG00000129455	tier1	rs56296296	-	38	0	0.00	30	11	26.83
LIMS2	0	genome.wustl.edu	37	2	128415042	128415042	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	128415042	128415042	A	C	SNP	LIMS2	ENST00000324938	human	ensembl	74_37	-1	known	missense	c.178	p.Y60D	1.000	pfam_Znf_LIM,smart_Znf_LIM,pirsf_PINCH,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pirsf_PINCH,pfscan_Znf_LIM	-	no_errors	LIMS2	HGNC	ENSG00000072163	tier1	-	-	71	0	0.00	49	16	24.62
ITGA10	0	genome.wustl.edu	37	1	145527693	145527693	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	145527693	145527693	G	T	SNP	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	missense	c.133	p.V45F	1.000	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1	-	-	88	0	0.00	45	10	18.18
TRAF7	0	genome.wustl.edu	37	16	2220714	2220716	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	2220714	2220716	GAG	-	DEL	TRAF7	ENST00000326181	human	ensembl	74_37	+1	known	in_frame_del	c.331_333	p.E114in_frame_del	1.000:1.000:1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_TRAF-like,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING,pfscan_Znf_TRAF,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TRAF7	HGNC	ENSG00000131653	tier1			34	0	0.00	17	3	15.00
USP37	0	genome.wustl.edu	37	2	219374834	219374834	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	219374834	219374834	G	T	SNP	USP37	ENST00000258399	human	ensembl	74_37	-1	known	missense	c.893	p.A298D	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19/C67	-	no_errors	USP37	HGNC	ENSG00000135913	tier1	-	-	64	0	0.00	36	4	10.00
TNIP3	0	genome.wustl.edu	37	4	122068281	122068281	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	4	122068281	122068281	T	C	SNP	TNIP3	ENST00000057513	human	ensembl	74_37	-1	known	missense	c.658	p.R220G	1.000	NULL	NULL	-	no_errors	TNIP3	HGNC	ENSG00000050730	tier1	-	-	49	0	0.00	21	16	43.24
ZDHHC23	0	genome.wustl.edu	37	3	113680733	113680733	+	RNA	DEL	T	T	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	113680733	113680733	T	-	DEL	ZDHHC23	ENST00000488129	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.901	-	-	-	no_errors	ZDHHC23	HGNC	ENSG00000184307	tier1			46	0	0.00	22	5	18.52
ENSG00000224113	0	genome.wustl.edu	37	17	33336054	33336054	+	RNA	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	33336054	33336054	G	T	SNP	ENSG00000224113	ENST00000578488	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP5-837J1.2	Clone_based_vega_gene	ENSG00000224113	tier1	-	-	38	0	0.00	19	3	13.64
NR2C2	0	genome.wustl.edu	37	3	15062399	15062399	+	Silent	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	15062399	15062399	C	T	SNP	NR2C2	ENST00000323373	human	ensembl	74_37	+1	known	silent	c.573	p.C191	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C2	HGNC	ENSG00000177463	tier1	-	-	84	0	0.00	42	4	8.70
RBM44	0	genome.wustl.edu	37	2	238737936	238737936	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	2	238737936	238737936	G	T	SNP	RBM44	ENST00000316997	human	ensembl	74_37	+1	known	nonsense	c.2680	p.G894*	0.996	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM44	HGNC	ENSG00000177483	tier1	-	-	30	0	0.00	22	3	12.00
ACTB	0	genome.wustl.edu	37	7	5567780	5567791	+	In_Frame_Del	DEL	TTGAAGGTAGTT	TTGAAGGTAGTT	-			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	TTGAAGGTAGTT	TTGAAGGTAGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	7	5567780	5567791	TTGAAGGTAGTT	-	DEL	ACTB	ENST00000331789	human	ensembl	74_37	-1	known	in_frame_del	c.839_828	p.ETTFN276in_frame_delD	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.983:1.000:1.000:1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTB	HGNC	ENSG00000075624	tier1			NA	NA	NA	NA	NA	NA
CILP2	0	genome.wustl.edu	37	19	19654128	19654128	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	19654128	19654128	G	A	SNP	CILP2	ENST00000291495	human	ensembl	74_37	+1	known	missense	c.1049	p.R350H	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP2	HGNC	ENSG00000160161	tier1	rs201485988	GMAF=0	100	0	0.00	25	10	28.57
GALNT8	0	genome.wustl.edu	37	12	4881618	4881618	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	12	4881618	4881618	C	T	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	missense	c.1769	p.A590V	0.002	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035	tier1	-	-	93	0	0.00	36	4	10.00
ENSG00000221515	0	genome.wustl.edu	37	16	52289448	52289449	+	RNA	INS	-	-	C			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	52289448	52289449	-	C	INS	ENSG00000221515	ENST00000408588	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	AC007333.1	Clone_based_ensembl_gene	ENSG00000221515	tier1			54	0	0.00	33	3	8.33
GRIN2C	0	genome.wustl.edu	37	17	72838591	72838591	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	17	72838591	72838591	G	A	SNP	GRIN2C	ENST00000293190	human	ensembl	74_37	-1	known	silent	c.3685	p.L1229	0.998	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,pfam_NMDAR2_C,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2C	HGNC	ENSG00000161509	tier1	-	-	88	0	0.00	31	25	44.64
USP6NL	0	genome.wustl.edu	37	10	11505780	11505780	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	10	11505780	11505780	G	T	SNP	USP6NL	ENST00000379237	human	ensembl	74_37	-1	known	missense	c.1216	p.H406N	0.133	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	USP6NL	HGNC	ENSG00000148429	tier1	-	-	78	0	0.00	35	4	10.26
WDR24	0	genome.wustl.edu	37	16	739189	739189	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	16	739189	739189	C	A	SNP	WDR24	ENST00000248142	human	ensembl	74_37	-1	known	missense	c.638	p.R213L	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR24	HGNC	ENSG00000127580	tier1	-	-	54	0	0.00	23	4	14.81
GLUL	0	genome.wustl.edu	37	1	182354511	182354511	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	182354511	182354511	G	A	SNP	GLUL	ENST00000311223	human	ensembl	74_37	-1	known	missense	c.784	p.R262W	1.000	pfam_Gln_synth_cat_dom	pfam_Gln_synth_cat_dom,pfam_Gln_synt_beta,superfamily_Gln_synt_beta	-	no_errors	GLUL	HGNC	ENSG00000135821	tier1	-	-	39	0	0.00	24	4	14.29
CYP4F11	0	genome.wustl.edu	37	19	16034882	16034882	+	Nonsense_Mutation	SNP	C	C	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	19	16034882	16034882	C	A	SNP	CYP4F11	ENST00000248041	human	ensembl	74_37	-1	known	nonsense	c.658	p.E220*	0.547	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F11	HGNC	ENSG00000171903	tier1	-	-	52	0	0.00	29	3	9.38
CCDC30	0	genome.wustl.edu	37	1	43108234	43108234	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	43108234	43108234	C	G	SNP	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	missense	c.1729	p.Q577E	0.036	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1	-	-	66	0	0.00	62	15	19.48
CD5L	0	genome.wustl.edu	37	1	157805788	157805788	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	1	157805788	157805788	G	A	SNP	CD5L	ENST00000368174	human	ensembl	74_37	-1	known	silent	c.213	p.S71	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD5L	HGNC	ENSG00000073754	tier1	-	-	33	0	0.00	17	8	32.00
SNX18	0	genome.wustl.edu	37	5	53815309	53815309	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	5	53815309	53815309	G	A	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	silent	c.1527	p.E509	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996	tier1	-	-	43	0	0.00	29	4	12.12
IDO1	0	genome.wustl.edu	37	8	39771493	39771493	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	8	39771493	39771493	G	T	SNP	IDO1	ENST00000518237	human	ensembl	74_37	+1	known	missense	c.52	p.D18Y	0.504	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO1	HGNC	ENSG00000131203	tier1	-	-	69	0	0.00	46	4	8.00
SLC6A11	0	genome.wustl.edu	37	3	10916711	10916711	+	Silent	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	3	10916711	10916711	G	A	SNP	SLC6A11	ENST00000254488	human	ensembl	74_37	+1	known	silent	c.822	p.T274	0.096	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,superfamily_S-AdoMet_deCO2ase_core,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT3	-	no_errors	SLC6A11	HGNC	ENSG00000132164	tier1	rs144481019	-	73	0	0.00	31	15	32.61
GABRQ	0	genome.wustl.edu	37	X	151815504	151815504	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YU-01A-12D-A33E-09	TCGA-DX-A6YU-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ace05a35-d1b2-4aa7-9c34-05b79d14a493	da7c4573-b81f-450f-9aeb-48c58a975706	X	151815504	151815504	G	A	SNP	GABRQ	ENST00000370306	human	ensembl	74_37	+1	known	missense	c.402	p.M134I	0.425	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAt_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABAAb_rcpt,prints_GABAAa_rcpt,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRQ	HGNC	ENSG00000147402	tier1	-	-	90	0	0.00	41	19	31.67
