Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
LOC100287042	0	genome.wustl.edu	37	17	73269841	73269842	+	RNA	INS	-	-	TTATT			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	73269841	73269842	-	TTATT	INS	LOC100287042	ENST00000585075	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	RP11-649A18.12	Clone_based_vega_gene	ENSG00000263843	tier1			NA	NA	NA	NA	NA	NA
DCAF10	0	genome.wustl.edu	37	9	37860098	37860098	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	9	37860098	37860098	A	T	SNP	DCAF10	ENST00000377724	human	ensembl	74_37	+1	known	missense	c.1219	p.S407C	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF10	HGNC	ENSG00000122741	tier1	-	-	44	0	0.00	11	23	67.65
TPTEP1	0	genome.wustl.edu	37	22	17178547	17178547	+	RNA	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	22	17178547	17178547	G	A	SNP	TPTEP1	ENST00000558085	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.098	-	-	-	no_errors	TPTEP1	HGNC	ENSG00000100181	tier1	-	-	63	0	0.00	37	8	17.78
VPS4A	0	genome.wustl.edu	37	16	69354619	69354619	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	16	69354619	69354619	G	A	SNP	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	silent	c.798	p.L266	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	tier1	-	-	32	0	0.00	1	14	93.33
KIAA0319L	0	genome.wustl.edu	37	1	35917355	35917355	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	35917355	35917355	C	T	SNP	KIAA0319L	ENST00000325722	human	ensembl	74_37	-1	known	missense	c.1936	p.E646K	0.971	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319L	HGNC	ENSG00000142687	tier1	-	-	65	0	0.00	68	8	10.53
EID1	0	genome.wustl.edu	37	15	49170547	49170552	+	In_Frame_Del	DEL	GGAGGA	GGAGGA	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	GGAGGA	GGAGGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	15	49170547	49170552	GGAGGA	-	DEL	EID1	ENST00000530028	human	ensembl	74_37	+1	known	in_frame_del	c.174_179	p.EE61in_frame_del	0.957:0.993:0.998:1.000:1.000:1.000	NULL	NULL	-	no_errors	EID1	HGNC	ENSG00000255302	tier1			NA	NA	NA	NA	NA	NA
NOP56	0	genome.wustl.edu	37	20	2633378	2633379	+	RNA	INS	-	-	GAGCCTGGGCCT			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	20	2633378	2633379	-	GAGCCTGGGCCT	INS	NOP56	ENST00000469588	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NOP56	HGNC	ENSG00000101361	tier1			NA	NA	NA	NA	NA	NA
DOCK2	0	genome.wustl.edu	37	5	169504797	169504797	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	5	169504797	169504797	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	silent	c.4950	p.S1650	0.999	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	29	0	0.00	13	6	31.58
DGKD	0	genome.wustl.edu	37	2	234343069	234343069	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	2	234343069	234343069	G	T	SNP	DGKD	ENST00000264057	human	ensembl	74_37	+1	known	missense	c.392	p.R131I	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,pfam_Pleckstrin_homology,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKD	HGNC	ENSG00000077044	tier1	-	-	80	0	0.00	37	4	9.76
TSTD3	0	genome.wustl.edu	37	6	99968898	99968899	+	RNA	INS	-	-	GCGCC			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	6	99968898	99968899	-	GCGCC	INS	TSTD3	ENST00000452647	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TSTD3	HGNC	ENSG00000228439	tier1			NA	NA	NA	NA	NA	NA
ENSG00000232220	0	genome.wustl.edu	37	19	54379103	54379104	+	RNA	INS	-	-	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	54379103	54379104	-	A	INS	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			32	0	0.00	24	3	11.11
LHFPL1	0	genome.wustl.edu	37	X	111914310	111914310	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	X	111914310	111914310	G	A	SNP	LHFPL1	ENST00000371968	human	ensembl	74_37	-1	known	silent	c.309	p.V103	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL1	HGNC	ENSG00000182508	tier1	-	-	21	0	0.00	26	11	29.73
ZNRF4	0	genome.wustl.edu	37	19	5456439	5456439	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	5456439	5456439	C	T	SNP	ZNRF4	ENST00000222033	human	ensembl	74_37	+1	known	silent	c.937	p.L313	0.994	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	ZNRF4	HGNC	ENSG00000105428	tier1	-	-	21	0	0.00	9	3	25.00
ANTXRL	0	genome.wustl.edu	37	10	47701296	47701296	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	10	47701296	47701296	C	-	DEL	ANTXRL	ENST00000537271	human	ensembl	74_37	+1	known	frame_shift_del	c.1652	p.R553fs	0.002	NULL	pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXRL	HGNC	ENSG00000198250	tier1			22	0	0.00	17	2	10.53
ZNF32	0	genome.wustl.edu	37	10	44139630	44139630	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	10	44139630	44139630	C	-	DEL	ZNF32	ENST00000374433	human	ensembl	74_37	-1	known	frame_shift_del	c.690	p.N231fs	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF32	HGNC	ENSG00000169740	tier1			36	0	0.00	18	2	10.00
CTNNA3	0	genome.wustl.edu	37	10	68280512	68280512	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	10	68280512	68280512	G	-	DEL	CTNNA3	ENST00000373744	human	ensembl	74_37	-1	known	frame_shift_del	c.1394	p.A465fs	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230	tier1			57	0	0.00	4	16	80.00
INTS3	0	genome.wustl.edu	37	1	153737498	153737498	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	153737498	153737498	G	T	SNP	INTS3	ENST00000318967	human	ensembl	74_37	+1	known	missense	c.2049	p.Q683H	1.000	NULL	pfam_Int_cplx_su3	-	no_errors	INTS3	HGNC	ENSG00000143624	tier1	-	-	32	0	0.00	46	4	8.00
SNORD115-25	0	genome.wustl.edu	37	15	25460742	25460742	+	RNA	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	15	25460742	25460742	C	T	SNP	SNORD115-25	ENST00000362619	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.940	-	-	-	no_errors	SNORD115-25	HGNC	ENSG00000199489	tier1	-	-	71	0	0.00	32	41	56.16
SLC22A18	0	genome.wustl.edu	37	11	2940204	2940204	+	RNA	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	11	2940204	2940204	C	T	SNP	SLC22A18	ENST00000441077	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC22A18	HGNC	ENSG00000110628	tier1	-	-	26	0	0.00	20	6	23.08
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
CNOT1	0	genome.wustl.edu	37	16	58572108	58572108	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	16	58572108	58572108	C	T	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	missense	c.5198	p.R1733H	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	rs185344213	GMAF=0.0005	51	0	0.00	36	4	10.00
MAGEB5	0	genome.wustl.edu	37	X	26235472	26235472	+	Silent	SNP	A	A	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	X	26235472	26235472	A	G	SNP	MAGEB5	ENST00000379029	human	ensembl	74_37	+1	known	silent	c.54	p.R18	0.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEB5	HGNC	ENSG00000188408	tier1	-	-	70	0	0.00	28	23	45.10
ZXDC	0	genome.wustl.edu	37	3	126194126	126194126	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	3	126194126	126194126	G	T	SNP	ZXDC	ENST00000389709	human	ensembl	74_37	-1	known	missense	c.583	p.H195N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDC	HGNC	ENSG00000070476	tier1	-	-	19	0	0.00	18	4	18.18
VPS54	0	genome.wustl.edu	37	2	64193060	64193060	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	2	64193060	64193060	G	A	SNP	VPS54	ENST00000272322	human	ensembl	74_37	-1	known	missense	c.533	p.T178I	1.000	NULL	pfam_Vps54,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS54	HGNC	ENSG00000143952	tier1	-	-	188	0	0.00	92	8	8.00
LAMC2	0	genome.wustl.edu	37	1	183195971	183195971	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	183195971	183195971	G	T	SNP	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	missense	c.1205	p.R402I	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085	tier1	-	-	52	0	0.00	37	4	9.76
KIF13B	0	genome.wustl.edu	37	8	28974507	28974507	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	28974507	28974507	G	A	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	silent	c.3678	p.S1226	0.804	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	tier1	-	-	17	0	0.00	5	7	58.33
MAGEB4	0	genome.wustl.edu	37	X	30260295	30260295	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	X	30260295	30260295	C	T	SNP	MAGEB4	ENST00000378982	human	ensembl	74_37	+1	known	missense	c.43	p.R15C	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	tier1	-	-	46	0	0.00	22	12	35.29
USP17L2	0	genome.wustl.edu	37	8	11995025	11995025	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	11995025	11995025	G	A	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	silent	c.1245	p.L415	0.003	pfam_HABP4_PAIRBP1-bd	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443	tier1	-	-	130	0	0.00	36	61	62.24
FLNC	0	genome.wustl.edu	37	7	128486157	128486160	+	Frame_Shift_Del	DEL	ACCT	ACCT	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	ACCT	ACCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	7	128486157	128486160	ACCT	-	DEL	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	frame_shift_del	c.3904_3907	p.T1302fs	1.000:1.000:0.980:0.983	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	tier1			33	0	0.00	33	8	19.51
GBA2	0	genome.wustl.edu	37	9	35740618	35740618	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	9	35740618	35740618	G	A	SNP	GBA2	ENST00000545786	human	ensembl	74_37	-1	known	missense	c.1052	p.T351I	0.798	pfam_GBA2_N,pirsf_Beta_glucosidase_GBA2-type	pfam_Glucosylceramidase,pfam_GBA2_N,superfamily_6-hairpin_glycosidase-like,pirsf_Beta_glucosidase_GBA2-type	-	no_errors	GBA2	HGNC	ENSG00000070610	tier1	-	-	42	0	0.00	3	23	88.46
PRX	0	genome.wustl.edu	37	19	40900180	40900182	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	40900180	40900182	TCC	-	DEL	PRX	ENST00000324001	human	ensembl	74_37	-1	known	in_frame_del	c.4079_4077	p.E1361in_frame_del	0.908:0.904:0.008	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227	tier1			27	0	0.00	29	5	14.71
ENSG00000263120	0	genome.wustl.edu	37	17	55062464	55062465	+	RNA	INS	-	-	GAAAA			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	55062464	55062465	-	GAAAA	INS	ENSG00000263120	ENST00000572877	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	RP5-1107A17.4	Clone_based_vega_gene	ENSG00000263120	tier1			NA	NA	NA	NA	NA	NA
LINC00686	0	genome.wustl.edu	37	20	61326511	61326511	+	RNA	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	20	61326511	61326511	C	T	SNP	LINC00686	ENST00000435412	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	LINC00686	HGNC	ENSG00000237687	tier1	-	-	38	0	0.00	20	20	50.00
TTC4	0	genome.wustl.edu	37	1	55207181	55207181	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	55207181	55207181	C	T	SNP	TTC4	ENST00000371281	human	ensembl	74_37	+1	known	nonsense	c.1159	p.R387*	0.144	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC4	HGNC	ENSG00000243725	tier1	rs200228539	GMAF=0.0005	32	0	0.00	44	4	8.33
SEZ6	0	genome.wustl.edu	37	17	27284100	27284100	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	27284100	27284100	G	-	DEL	SEZ6	ENST00000317338	human	ensembl	74_37	-1	known	frame_shift_del	c.2655	p.S886fs	0.714	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_CUB_dom,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6	HGNC	ENSG00000063015	tier1			19	0	0.00	14	2	12.50
DNAH5	0	genome.wustl.edu	37	5	13829759	13829759	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	5	13829759	13829759	G	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.6304	p.R2102C	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	62	0	0.00	69	8	10.39
ENSG00000232783	0	genome.wustl.edu	37	3	197838274	197838275	+	RNA	DEL	AA	AA	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	3	197838274	197838275	AA	-	DEL	ENSG00000232783	ENST00000411596	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene	ENSG00000232783	tier1			20	0	0.00	25	5	16.67
CD2	0	genome.wustl.edu	37	1	117311333	117311333	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	117311333	117311333	C	-	DEL	CD2	ENST00000369478	human	ensembl	74_37	+1	known	frame_shift_del	c.984	p.R330fs	0.998	NULL	pfam_Ig_C2-set,pfam_Ig_V-set,prints_CD2	-	no_errors	CD2	HGNC	ENSG00000116824	tier1			22	0	0.00	18	2	10.00
TNFAIP1	0	genome.wustl.edu	37	17	26671442	26671442	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	26671442	26671442	A	G	SNP	TNFAIP1	ENST00000226225	human	ensembl	74_37	+1	known	missense	c.767	p.Y256C	0.995	NULL	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	TNFAIP1	HGNC	ENSG00000109079	tier1	-	-	51	0	0.00	4	21	84.00
SEMA6A	0	genome.wustl.edu	37	5	115822489	115822489	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	5	115822489	115822489	G	A	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	silent	c.918	p.N306	0.994	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421	tier1	rs201133760	GMAF=0	126	0	0.00	54	34	38.64
LOC100631378	0	genome.wustl.edu	37	19	38324091	38324091	+	RNA	SNP	C	C	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	38324091	38324091	C	A	SNP	LOC100631378	ENST00000433142	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047	-	-	-	no_errors	AC016582.2	Clone_based_vega_gene	ENSG00000225868	tier1	-	-	74	0	0.00	49	15	23.44
DIP2C	0	genome.wustl.edu	37	10	412231	412231	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	10	412231	412231	G	T	SNP	DIP2C	ENST00000280886	human	ensembl	74_37	-1	known	missense	c.2252	p.T751N	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240	tier1	-	-	70	0	0.00	34	4	10.53
ASAP1	0	genome.wustl.edu	37	8	131124344	131124344	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	131124344	131124344	C	-	DEL	ASAP1	ENST00000357668	human	ensembl	74_37	-1	known	frame_shift_del	c.2397	p.G801fs	1.000	NULL	pfam_ArfGAP,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP,prints_p67phox	-	no_errors	ASAP1	HGNC	ENSG00000153317	tier1			88	0	0.00	12	2	14.29
FOXD2	0	genome.wustl.edu	37	1	47904668	47904669	+	In_Frame_Ins	INS	-	-	CCGCAC			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	47904668	47904669	-	CCGCAC	INS	FOXD2	ENST00000334793	human	ensembl	74_37	+1	known	in_frame_ins	c.861_862	p.291in_frame_insPH	0.056:0.602	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD2	HGNC	ENSG00000186564	tier1			NA	NA	NA	NA	NA	NA
USP17L2	0	genome.wustl.edu	37	8	11995433	11995433	+	Silent	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	11995433	11995433	G	T	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	silent	c.837	p.V279	0.021	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443	tier1	rs75180221	-	124	0	0.00	50	37	42.53
TTC40	0	genome.wustl.edu	37	10	134628237	134628237	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	10	134628237	134628237	C	T	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	missense	c.1685	p.R562Q	0.289	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	80	0	0.00	20	19	48.72
USP17L2	0	genome.wustl.edu	37	8	11995496	11995496	+	Silent	SNP	G	G	C			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	11995496	11995496	G	C	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	silent	c.774	p.L258	0.003	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443	tier1	-	-	101	0	0.00	45	38	45.78
ZNF730	0	genome.wustl.edu	37	19	23329315	23329315	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	23329315	23329315	G	C	SNP	ZNF730	ENST00000597761	human	ensembl	74_37	+1	known	missense	c.1469	p.R490T	0.040	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF730	HGNC	ENSG00000183850	tier1	-	-	134	0	0.00	35	43	55.13
MICB	0	genome.wustl.edu	37	6	31477568	31477568	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	6	31477568	31477568	G	T	SNP	MICB	ENST00000252229	human	ensembl	74_37	+1	known	missense	c.1034	p.S345I	0.001	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	MICB	HGNC	ENSG00000204516	tier1	-	-	45	0	0.00	27	4	12.90
PTPRZ1	0	genome.wustl.edu	37	7	121623806	121623806	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	7	121623806	121623806	C	A	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	missense	c.707	p.T236K	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	tier1	-	-	69	0	0.00	31	39	55.71
TMEM71	0	genome.wustl.edu	37	8	133759251	133759251	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	133759251	133759251	G	A	SNP	TMEM71	ENST00000356838	human	ensembl	74_37	-1	known	missense	c.367	p.P123S	0.002	NULL	NULL	-	no_errors	TMEM71	HGNC	ENSG00000165071	tier1	-	-	139	0	0.00	80	132	61.97
GRIK5	0	genome.wustl.edu	37	19	42567637	42567637	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	42567637	42567637	C	T	SNP	GRIK5	ENST00000594528	human	ensembl	74_37	-1	known	silent	c.285	p.R95	0.020	NULL	NULL	-	no_errors	GRIK5	HGNC	ENSG00000105737	tier1	-	-	14	0	0.00	3	15	83.33
EPHA3	0	genome.wustl.edu	37	3	89259542	89259542	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	3	89259542	89259542	C	T	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.686	p.S229F	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524	tier1	-	-	55	0	0.00	28	18	39.13
RGS6	0	genome.wustl.edu	37	14	72924986	72924986	+	Silent	SNP	A	A	C			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	14	72924986	72924986	A	C	SNP	RGS6	ENST00000553525	human	ensembl	74_37	+1	known	silent	c.243	p.A81	1.000	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS6	HGNC	ENSG00000182732	tier1	-	-	68	0	0.00	39	14	26.42
RHOXF2	0	genome.wustl.edu	37	X	119293221	119293221	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	X	119293221	119293221	G	A	SNP	RHOXF2	ENST00000371388	human	ensembl	74_37	+1	known	missense	c.380	p.G127E	0.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	RHOXF2	HGNC	ENSG00000131721	tier1	-	-	57	0	0.00	64	29	31.18
LRIG2	0	genome.wustl.edu	37	1	113655143	113655143	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	113655143	113655143	G	T	SNP	LRIG2	ENST00000361127	human	ensembl	74_37	+1	known	missense	c.1841	p.R614L	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1	-	-	40	0	0.00	16	3	15.79
SNORD3A	0	genome.wustl.edu	37	17	19091392	19091392	+	RNA	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	19091392	19091392	G	A	SNP	SNORD3A	ENST00000365494	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SNORD3A	HGNC	ENSG00000263934	tier1	-	-	711	0	0.00	587	53	8.27
SCN4A	0	genome.wustl.edu	37	17	62018305	62018305	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	62018305	62018305	C	G	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.5337	p.M1779I	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	23	0	0.00	22	13	37.14
HCP5	0	genome.wustl.edu	37	6	31431255	31431255	+	RNA	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	6	31431255	31431255	G	T	SNP	HCP5	ENST00000414046	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.034	-	-	-	no_errors	HCP5	HGNC	ENSG00000206337	tier1	-	-	44	0	0.00	30	4	11.76
CCDC170	0	genome.wustl.edu	37	6	151869452	151869452	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	6	151869452	151869452	G	A	SNP	CCDC170	ENST00000367290	human	ensembl	74_37	+1	known	missense	c.602	p.R201H	0.998	NULL	superfamily_Prefoldin,superfamily_Smac_DIABLO-like	-	no_errors	CCDC170	HGNC	ENSG00000120262	tier1	rs200538059	-	106	0	0.00	52	5	8.77
RP1L1	0	genome.wustl.edu	37	8	10469906	10469906	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	8	10469906	10469906	C	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.1702	p.A568T	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	71	0	0.00	12	25	67.57
LILRB5	0	genome.wustl.edu	37	19	54760408	54760408	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	54760408	54760408	T	G	SNP	LILRB5	ENST00000450632	human	ensembl	74_37	-1	known	missense	c.299	p.Y100S	0.000	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB5	HGNC	ENSG00000105609	tier1	-	-	52	0	0.00	39	14	26.42
KIF4B	0	genome.wustl.edu	37	5	154394598	154394598	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	5	154394598	154394598	G	A	SNP	KIF4B	ENST00000435029	human	ensembl	74_37	+1	known	silent	c.1179	p.Q393	0.065	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4B	HGNC	ENSG00000226650	tier1	-	-	82	0	0.00	48	20	29.41
SCN2A	0	genome.wustl.edu	37	2	166243439	166243439	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	2	166243439	166243439	G	A	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.4735	p.V1579M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	70	0	0.00	3	25	89.29
MYO15A	0	genome.wustl.edu	37	17	18023164	18023164	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	18023164	18023164	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.1050	p.D350	0.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	86	0	0.00	7	45	86.54
LOC100128374	0	genome.wustl.edu	37	7	1887286	1887286	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	7	1887286	1887286	C	T	SNP	LOC100128374	ENST00000318959	human	ensembl	74_37	+1	known	silent	c.528	p.L176	0.000	NULL	NULL	-	no_errors	AC110781.3	Clone_based_vega_gene	ENSG00000176349	tier1	-	-	30	0	0.00	17	8	32.00
SMURF2	0	genome.wustl.edu	37	17	62552085	62552085	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	17	62552085	62552085	C	T	SNP	SMURF2	ENST00000262435	human	ensembl	74_37	-1	known	missense	c.1463	p.R488Q	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF2	HGNC	ENSG00000108854	tier1	-	-	165	1	0.60	72	85	54.14
LINC00955	0	genome.wustl.edu	37	4	3589656	3589669	+	Frame_Shift_Del	DEL	ACTCCCAGATGCAG	ACTCCCAGATGCAG	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	ACTCCCAGATGCAG	ACTCCCAGATGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	4	3589656	3589669	ACTCCCAGATGCAG	-	DEL	LINC00955	ENST00000514422	human	ensembl	74_37	+1	novel	frame_shift_del	c.24_37	p.D11fs	0.086:0.080:0.080:0.088:0.143:0.156:0.154:0.145:0.135:0.135:0.134:0.130:0.136:0.162	NULL	NULL	-	no_errors	LINC00955	HGNC	ENSG00000216560	tier1			NA	NA	NA	NA	NA	NA
MUC16	0	genome.wustl.edu	37	19	9026241	9026241	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	9026241	9026241	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.36745	p.R12249C	0.000	pfam_SEA_dom,smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	78	0	0.00	48	9	15.79
PCDHAC2	0	genome.wustl.edu	37	5	140347582	140347582	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	5	140347582	140347582	C	G	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	missense	c.1231	p.R411G	0.143	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232	tier1	-	-	26	0	0.00	10	16	61.54
ZBTB39	0	genome.wustl.edu	37	12	57398662	57398662	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	12	57398662	57398662	T	C	SNP	ZBTB39	ENST00000300101	human	ensembl	74_37	-1	known	missense	c.40	p.N14D	1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB39	HGNC	ENSG00000166860	tier1	-	-	52	0	0.00	36	4	10.00
OBSCN	0	genome.wustl.edu	37	1	228562289	228562289	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	228562289	228562289	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.22499	p.G7500V	0.942	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	55	0	0.00	28	4	12.50
TET2	0	genome.wustl.edu	37	4	106158255	106158255	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	4	106158255	106158255	G	T	SNP	TET2	ENST00000380013	human	ensembl	74_37	+1	known	missense	c.3156	p.K1052N	1.000	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769	tier1	-	-	45	0	0.00	17	3	15.00
SH3BGRL	0	genome.wustl.edu	37	X	80532631	80532631	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	X	80532631	80532631	T	C	SNP	SH3BGRL	ENST00000373212	human	ensembl	74_37	+1	known	missense	c.194	p.L65P	0.903	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	-	no_errors	SH3BGRL	HGNC	ENSG00000131171	tier1	-	-	237	0	0.00	148	80	35.09
TPP2	0	genome.wustl.edu	37	13	103301602	103301602	+	RNA	DEL	T	T	-			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	13	103301602	103301602	T	-	DEL	TPP2	ENST00000490420	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPP2	HGNC	ENSG00000134900	tier1			44	0	0.00	25	6	19.35
MAP3K10	0	genome.wustl.edu	37	19	40721091	40721091	+	Silent	SNP	G	G	A			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	19	40721091	40721091	G	A	SNP	MAP3K10	ENST00000253055	human	ensembl	74_37	+1	known	silent	c.2757	p.P919	0.001	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K10	HGNC	ENSG00000130758	tier1	-	-	52	0	0.00	28	9	24.32
TANK	0	genome.wustl.edu	37	2	162017849	162017849	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	2	162017849	162017849	G	T	SNP	TANK	ENST00000402568	human	ensembl	74_37	+1	putative	missense	c.51	p.K17N	0.014	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	50	0	0.00	36	4	10.00
OAS3	0	genome.wustl.edu	37	12	113401152	113401152	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	12	113401152	113401152	A	G	SNP	OAS3	ENST00000228928	human	ensembl	74_37	+1	known	missense	c.2119	p.N707D	0.998	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS3	HGNC	ENSG00000111331	tier1	-	-	23	0	0.00	25	12	32.43
GBP2	0	genome.wustl.edu	37	1	89578203	89578203	+	Silent	SNP	C	C	T			TCGA-DX-A6YX-01A-11D-A417-09	TCGA-DX-A6YX-10B-01D-A41A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	292eef9c-c947-4841-99cc-5f5d183e2f1c	1ca46aad-e03c-417b-9dca-178b183c93c1	1	89578203	89578203	C	T	SNP	GBP2	ENST00000370466	human	ensembl	74_37	-1	known	silent	c.1314	p.L438	0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP2	HGNC	ENSG00000162645	tier1	-	-	43	0	0.00	38	4	9.52
