Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
COL1A1	0	genome.wustl.edu	37	17	48272451	48272451	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	48272451	48272451	C	T	SNP	COL1A1	ENST00000225964	human	ensembl	74_37	-1	known	missense	c.1310	p.G437D	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL1A1	HGNC	ENSG00000108821	tier1	-	-	42	0	0.00	22	4	15.38
LOXL1	0	genome.wustl.edu	37	15	74244422	74244422	+	RNA	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	74244422	74244422	C	T	SNP	LOXL1	ENST00000567675	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	LOXL1	HGNC	ENSG00000129038	tier1	rs7168465	-	45	0	0.00	29	3	9.38
PACRG	0	genome.wustl.edu	37	6	163483279	163483279	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	163483279	163483279	G	T	SNP	PACRG	ENST00000337019	human	ensembl	74_37	+1	known	missense	c.389	p.G130V	1.000	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	-	no_errors	PACRG	HGNC	ENSG00000112530	tier1	-	-	47	0	0.00	17	5	22.73
ELAC2	0	genome.wustl.edu	37	17	12906831	12906832	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	12906831	12906832	CA	-	DEL	ELAC2	ENST00000338034	human	ensembl	74_37	-1	known	frame_shift_del	c.1044_1043	p.V348fs	0.933:0.932	NULL	pfam_Beta-lactamas-like	-	no_errors	ELAC2	HGNC	ENSG00000006744	tier1			85	0	0.00	45	30	40.00
C7orf10	0	genome.wustl.edu	37	7	40277290	40277290	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	40277290	40277290	G	A	SNP	C7orf10	ENST00000309930	human	ensembl	74_37	+1	known	missense	c.562	p.A188T	1.000	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	C7orf10	HGNC	ENSG00000175600	tier1	-	-	47	0	0.00	26	4	12.90
INTS1	0	genome.wustl.edu	37	7	1538144	1538144	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	1538144	1538144	C	A	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	missense	c.1713	p.K571N	1.000	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880	tier1	-	-	80	0	0.00	47	5	9.62
GOLGB1	0	genome.wustl.edu	37	3	121413302	121413302	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	121413302	121413302	T	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.6053	p.Q2018L	1.000	superfamily_Prefoldin	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	14	0	0.00	4	7	63.64
TACSTD2	0	genome.wustl.edu	37	1	59041881	59041898	+	In_Frame_Del	DEL	CTCCCCCAGTTCCTTGAT	CTCCCCCAGTTCCTTGAT	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	CTCCCCCAGTTCCTTGAT	CTCCCCCAGTTCCTTGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	59041881	59041898	CTCCCCCAGTTCCTTGAT	-	DEL	TACSTD2	ENST00000371225	human	ensembl	74_37	-1	known	in_frame_del	c.948_931	p.IKELGE311in_frame_del	0.999:1.000:1.000:1.000:1.000:1.000:1.000:0.998:0.935:0.910:0.989:0.996:0.994:0.999:0.999:0.998:0.997:0.993	NULL	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	TACSTD2	HGNC	ENSG00000184292	tier1			NA	NA	NA	NA	NA	NA
CYP2C19	0	genome.wustl.edu	37	10	96609706	96609706	+	Silent	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	10	96609706	96609706	G	T	SNP	CYP2C19	ENST00000371321	human	ensembl	74_37	+1	known	silent	c.1182	p.V394	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C19	HGNC	ENSG00000165841	tier1	-	-	79	0	0.00	31	4	11.43
SSX1	0	genome.wustl.edu	37	X	48125797	48125797	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	X	48125797	48125797	G	T	SNP	SSX1	ENST00000376919	human	ensembl	74_37	+1	known	missense	c.542	p.S181I	0.735	pfam_SSXRD_motif	pfam_SSXRD_motif,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	SSX1	HGNC	ENSG00000126752	tier1	-	-	353	0	0.00	140	81	36.65
NPTXR	0	genome.wustl.edu	37	22	39222586	39222586	+	Silent	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	22	39222586	39222586	G	A	SNP	NPTXR	ENST00000333039	human	ensembl	74_37	-1	known	silent	c.1017	p.S339	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTXR	HGNC	ENSG00000221890	tier1	-	-	75	0	0.00	39	11	22.00
ENSG00000237234	0	genome.wustl.edu	37	6	112476928	112476928	+	RNA	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	112476928	112476928	G	T	SNP	ENSG00000237234	ENST00000588689	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-142L7.5	Clone_based_vega_gene	ENSG00000237234	tier1	-	-	59	0	0.00	25	7	21.88
TNS3	0	genome.wustl.edu	37	7	47408586	47408586	+	Silent	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	47408586	47408586	G	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	silent	c.1657	p.R553	0.699	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205	tier1	-	-	33	0	0.00	20	4	16.67
ANHX	0	genome.wustl.edu	37	12	133803696	133803696	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	12	133803696	133803696	A	G	SNP	ANHX	ENST00000419717	human	ensembl	74_37	-1	known	missense	c.544	p.Y182H	0.746	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ANHX	HGNC	ENSG00000227059	tier1	-	-	99	0	0.00	40	36	47.37
FOXRED2	0	genome.wustl.edu	37	22	36894076	36894076	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	22	36894076	36894076	C	G	SNP	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	missense	c.1344	p.Q448H	1.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350	tier1	-	-	127	0	0.00	53	22	29.33
DMXL1	0	genome.wustl.edu	37	5	118533525	118533525	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	5	118533525	118533525	G	A	SNP	DMXL1	ENST00000539542	human	ensembl	74_37	+1	known	missense	c.7619	p.R2540Q	1.000	NULL	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL1	HGNC	ENSG00000172869	tier1	-	-	99	0	0.00	77	17	18.09
SOX6	0	genome.wustl.edu	37	11	16119196	16119196	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	16119196	16119196	C	A	SNP	SOX6	ENST00000352083	human	ensembl	74_37	-1	known	missense	c.937	p.A313S	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX6	HGNC	ENSG00000110693	tier1	-	-	55	0	0.00	27	7	20.59
UMODL1	0	genome.wustl.edu	37	21	43531405	43531405	+	Silent	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	21	43531405	43531405	G	T	SNP	UMODL1	ENST00000408989	human	ensembl	74_37	+1	known	silent	c.2073	p.R691	0.000	NULL	pfam_ZP_dom,pfam_SEA_dom,pfam_EGF-like_Ca-bd_dom,pfam_EMI_domain,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_EGF-like_Ca-bd_dom,smart_Fibronectin_type3,smart_ZP_dom,pfscan_EG-like_dom,pfscan_EMI_domain,pfscan_Fibronectin_type3,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMODL1	HGNC	ENSG00000177398	tier1	-	-	24	0	0.00	16	4	20.00
SEMA4G	0	genome.wustl.edu	37	10	102744515	102744515	+	Nonsense_Mutation	SNP	T	T	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	10	102744515	102744515	T	A	SNP	SEMA4G	ENST00000517724	human	ensembl	74_37	+1	putative	nonsense	c.1974	p.C658*	0.005	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4G	HGNC	ENSG00000095539	tier1	-	-	34	0	0.00	23	9	28.12
DNM1P47	0	genome.wustl.edu	37	15	102294602	102294602	+	RNA	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	102294602	102294602	C	T	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	61	0	0.00	40	5	11.11
RIC3	0	genome.wustl.edu	37	11	8159967	8159967	+	RNA	DEL	A	A	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	8159967	8159967	A	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			33	0	0.00	22	3	12.00
SIDT2	0	genome.wustl.edu	37	11	117064673	117064673	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	117064673	117064673	C	T	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	silent	c.2379	p.T793	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577	tier1	-	-	25	0	0.00	8	9	52.94
ZNF879	0	genome.wustl.edu	37	5	178459892	178459892	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	5	178459892	178459892	C	A	SNP	ZNF879	ENST00000444149	human	ensembl	74_37	+1	known	missense	c.943	p.P315T	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF879	HGNC	ENSG00000234284	tier1	-	-	56	0	0.00	58	16	21.62
KLHL24	0	genome.wustl.edu	37	3	183368664	183368664	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	183368664	183368664	T	-	DEL	KLHL24	ENST00000242810	human	ensembl	74_37	+1	known	frame_shift_del	c.520	p.F174fs	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL24	HGNC	ENSG00000114796	tier1			17	0	0.00	17	2	10.53
MN1	0	genome.wustl.edu	37	22	28194945	28194945	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	22	28194945	28194945	C	T	SNP	MN1	ENST00000302326	human	ensembl	74_37	-1	known	silent	c.1587	p.Q529	0.972	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184	tier1	-	-	61	0	0.00	18	9	33.33
OR10Z1	0	genome.wustl.edu	37	1	158576852	158576852	+	Silent	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	158576852	158576852	G	A	SNP	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	silent	c.624	p.L208	0.029	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967	tier1	-	-	34	0	0.00	21	4	16.00
ZNF683	0	genome.wustl.edu	37	1	26691177	26691177	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	26691177	26691177	T	C	SNP	ZNF683	ENST00000403843	human	ensembl	74_37	-1	known	missense	c.860	p.E287G	0.004	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF683	HGNC	ENSG00000176083	tier1	-	-	121	0	0.00	42	4	8.70
CDK11A	0	genome.wustl.edu	37	1	1647893	1647894	+	In_Frame_Ins	INS	-	-	TTTCTT			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	1647893	1647894	-	TTTCTT	INS	CDK11A	ENST00000404249	human	ensembl	74_37	-1	known	in_frame_ins	c.380_379	p.127in_frame_insKE	0.142:0.971	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11A	HGNC	ENSG00000008128	tier1			NA	NA	NA	NA	NA	NA
ENSG00000267601	0	genome.wustl.edu	37	17	76851711	76851711	+	RNA	DEL	T	T	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	76851711	76851711	T	-	DEL	ENSG00000267601	ENST00000587434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.655	-	-	-	no_errors	RP11-323N12.5	Clone_based_vega_gene	ENSG00000267601	tier1			45	0	0.00	27	3	10.00
TEKT3	0	genome.wustl.edu	37	17	15215789	15215789	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	15215789	15215789	C	T	SNP	TEKT3	ENST00000338696	human	ensembl	74_37	-1	known	silent	c.888	p.V296	1.000	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT3	HGNC	ENSG00000125409	tier1	-	-	40	0	0.00	32	7	17.95
ENSG00000268985	0	genome.wustl.edu	37	19	17120142	17120143	+	RNA	DEL	AC	AC	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	19	17120142	17120143	AC	-	DEL	ENSG00000268985	ENST00000595134	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991:0.989	-	-	-	no_errors	CTD-2528A14.1	Clone_based_vega_gene	ENSG00000268985	tier1			76	0	0.00	38	12	24.00
CELP	0	genome.wustl.edu	37	9	135962585	135962586	+	RNA	INS	-	-	GCCCCATCCCCGCTACGGGTGACTCTGAGGCC			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	9	135962585	135962586	-	GCCCCATCCCCGCTACGGGTGACTCTGAGGCC	INS	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.130:0.000	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1			NA	NA	NA	NA	NA	NA
USP28	0	genome.wustl.edu	37	11	113711441	113711441	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	113711441	113711441	T	G	SNP	USP28	ENST00000003302	human	ensembl	74_37	-1	known	missense	c.413	p.K138T	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,pfscan_Peptidase_C19/C67	-	no_errors	USP28	HGNC	ENSG00000048028	tier1	-	-	61	0	0.00	33	16	32.65
NAGLU	0	genome.wustl.edu	37	17	40695606	40695606	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	40695606	40695606	A	G	SNP	NAGLU	ENST00000225927	human	ensembl	74_37	+1	known	missense	c.1582	p.S528G	0.010	pfam_NAGLU_tim-barrel	pfam_NAGLU_tim-barrel,superfamily_Glycoside_hydrolase_SF	-	no_errors	NAGLU	HGNC	ENSG00000108784	tier1	-	-	42	0	0.00	20	5	20.00
NME6	0	genome.wustl.edu	37	3	48336679	48336679	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	48336679	48336679	G	T	SNP	NME6	ENST00000421967	human	ensembl	74_37	-1	known	missense	c.304	p.L102I	1.000	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,prints_Nucleoside_diP_kinase	-	no_errors	NME6	HGNC	ENSG00000172113	tier1	-	-	63	0	0.00	30	4	11.76
MAP1LC3A	0	genome.wustl.edu	37	20	33147980	33147987	+	RNA	DEL	CTGCCTGT	CTGCCTGT	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	CTGCCTGT	CTGCCTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	20	33147980	33147987	CTGCCTGT	-	DEL	MAP1LC3A	ENST00000476428	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000	-	-	-	no_errors	MAP1LC3A	HGNC	ENSG00000101460	tier1			NA	NA	NA	NA	NA	NA
HELB	0	genome.wustl.edu	37	12	66703801	66703801	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	12	66703801	66703801	T	-	DEL	HELB	ENST00000247815	human	ensembl	74_37	+1	known	frame_shift_del	c.1093	p.S366fs	0.098	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELB	HGNC	ENSG00000127311	tier1			42	0	0.00	21	2	8.70
RASGEF1C	0	genome.wustl.edu	37	5	179542375	179542375	+	RNA	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	5	179542375	179542375	C	A	SNP	RASGEF1C	ENST00000519456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	RASGEF1C	HGNC	ENSG00000146090	tier1	-	-	34	0	0.00	42	6	12.50
FANCM	0	genome.wustl.edu	37	14	45633722	45633722	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	14	45633722	45633722	G	C	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.1742	p.R581P	1.000	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	91	0	0.00	84	25	22.94
LDLRAD4	0	genome.wustl.edu	37	18	13387561	13387561	+	RNA	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	18	13387561	13387561	C	A	SNP	LDLRAD4	ENST00000590371	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.925	-	-	-	no_errors	LDLRAD4	HGNC	ENSG00000168675	tier1	-	-	41	0	0.00	13	3	18.75
ZNF512	0	genome.wustl.edu	37	2	27822468	27822468	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	27822468	27822468	C	G	SNP	ZNF512	ENST00000355467	human	ensembl	74_37	+1	known	missense	c.296	p.A99G	0.235	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF512	HGNC	ENSG00000243943	tier1	-	-	97	0	0.00	39	10	20.41
TNXB	0	genome.wustl.edu	37	6	32032641	32032641	+	Silent	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	32032641	32032641	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.6798	p.H2266	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	81	0	0.00	43	4	8.51
CD55	0	genome.wustl.edu	37	1	207532941	207532941	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	207532941	207532941	G	T	SNP	CD55	ENST00000314754	human	ensembl	74_37	+1	known	missense	c.1250	p.G417V	0.983	NULL	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD55	HGNC	ENSG00000196352	tier1	-	-	76	0	0.00	41	4	8.89
FBXO39	0	genome.wustl.edu	37	17	6690669	6690669	+	Silent	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	6690669	6690669	G	T	SNP	FBXO39	ENST00000321535	human	ensembl	74_37	+1	known	silent	c.1251	p.L417	0.998	NULL	NULL	-	no_errors	FBXO39	HGNC	ENSG00000177294	tier1	-	-	20	0	0.00	10	3	23.08
LRP1B	0	genome.wustl.edu	37	2	141272314	141272314	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	141272314	141272314	G	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.8177	p.A2726V	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	75	0	0.00	46	4	8.00
COL11A2	0	genome.wustl.edu	37	6	33156189	33156189	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	33156189	33156189	G	C	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.556	p.H186D	0.941	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	tier1	-	-	55	0	0.00	20	11	35.48
DPYSL5	0	genome.wustl.edu	37	2	27167529	27167529	+	Silent	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	27167529	27167529	A	G	SNP	DPYSL5	ENST00000288699	human	ensembl	74_37	+1	known	silent	c.1446	p.L482	0.995	superfamily_Metal-dep_hydrolase_composite	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL5	HGNC	ENSG00000157851	tier1	-	-	95	0	0.00	37	15	28.85
HSF2BP	0	genome.wustl.edu	37	21	45064234	45064234	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	21	45064234	45064234	A	T	SNP	HSF2BP	ENST00000291560	human	ensembl	74_37	-1	known	missense	c.227	p.M76K	0.998	NULL	superfamily_ARM-type_fold	-	no_errors	HSF2BP	HGNC	ENSG00000160207	tier1	-	-	44	0	0.00	30	4	11.76
ZC3H15	0	genome.wustl.edu	37	2	187370520	187370520	+	Silent	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	187370520	187370520	T	C	SNP	ZC3H15	ENST00000337859	human	ensembl	74_37	+1	known	silent	c.918	p.D306	0.998	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H15	HGNC	ENSG00000065548	tier1	-	-	87	0	0.00	42	25	37.31
MORC3	0	genome.wustl.edu	37	21	37741363	37741363	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	21	37741363	37741363	C	-	DEL	MORC3	ENST00000400485	human	ensembl	74_37	+1	known	frame_shift_del	c.1697	p.S566fs	0.728	NULL	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC3	HGNC	ENSG00000159256	tier1			42	0	0.00	35	4	10.26
MOV10L1	0	genome.wustl.edu	37	22	50558966	50558966	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	22	50558966	50558966	A	G	SNP	MOV10L1	ENST00000262794	human	ensembl	74_37	+1	known	missense	c.1490	p.Q497R	0.868	NULL	superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold	-	no_errors	MOV10L1	HGNC	ENSG00000073146	tier1	-	-	100	0	0.00	38	16	29.63
TXNDC8	0	genome.wustl.edu	37	9	113091512	113091512	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	9	113091512	113091512	C	T	SNP	TXNDC8	ENST00000374511	human	ensembl	74_37	-1	known	silent	c.189	p.P63	0.964	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC8	HGNC	ENSG00000204193	tier1	rs200152415	-	74	0	0.00	47	5	9.62
CMYA5	0	genome.wustl.edu	37	5	79032251	79032251	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	5	79032251	79032251	C	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	nonsense	c.7663	p.Q2555*	0.279	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1	-	-	36	0	0.00	24	4	14.29
PPAP2B	0	genome.wustl.edu	37	1	56978868	56978869	+	RNA	INS	-	-	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	56978868	56978869	-	A	INS	PPAP2B	ENST00000459962	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1			51	0	0.00	27	3	10.00
TMEM254	0	genome.wustl.edu	37	10	81850173	81850173	+	RNA	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	10	81850173	81850173	C	T	SNP	TMEM254	ENST00000476173	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	TMEM254	HGNC	ENSG00000133678	tier1	-	-	63	0	0.00	32	4	11.11
SQRDL	0	genome.wustl.edu	37	15	45951302	45951302	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	45951302	45951302	C	A	SNP	SQRDL	ENST00000260324	human	ensembl	74_37	+1	known	missense	c.181	p.R61S	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	SQRDL	HGNC	ENSG00000137767	tier1	-	-	31	0	0.00	21	3	12.50
CTAGE9	0	genome.wustl.edu	37	6	132031121	132031121	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	132031121	132031121	T	C	SNP	CTAGE9	ENST00000314099	human	ensembl	74_37	-1	known	missense	c.1037	p.D346G	0.942	NULL	NULL	-	no_errors	CTAGE9	HGNC	ENSG00000236761	tier1	-	-	55	0	0.00	32	7	17.95
GATA1	0	genome.wustl.edu	37	X	48651599	48651599	+	Silent	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	X	48651599	48651599	T	C	SNP	GATA1	ENST00000376670	human	ensembl	74_37	+1	known	silent	c.765	p.G255	0.957	smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA1	HGNC	ENSG00000102145	tier1	-	-	86	0	0.00	37	7	15.91
TOR1A	0	genome.wustl.edu	37	9	132580862	132580862	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	9	132580862	132580862	C	T	SNP	TOR1A	ENST00000351698	human	ensembl	74_37	-1	known	missense	c.685	p.E229K	1.000	superfamily_P-loop_NTPase,pirsf_Torsin_subgr	pfam_Torsin,superfamily_P-loop_NTPase,pirsf_Torsin_subgr	-	no_errors	TOR1A	HGNC	ENSG00000136827	tier1	-	-	92	0	0.00	51	23	31.08
C7orf63	0	genome.wustl.edu	37	7	89933287	89933287	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	89933287	89933287	A	-	DEL	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	frame_shift_del	c.2055	p.K687fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792	tier1			55	0	0.00	26	4	13.33
KPTN	0	genome.wustl.edu	37	19	47978663	47978663	+	RNA	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	19	47978663	47978663	G	T	SNP	KPTN	ENST00000600551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KPTN	HGNC	ENSG00000118162	tier1	-	-	94	0	0.00	53	5	8.62
TULP4	0	genome.wustl.edu	37	6	158924606	158924606	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	158924606	158924606	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	missense	c.3911	p.G1304D	0.335	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1	-	-	66	0	0.00	44	4	8.33
ZNF684	0	genome.wustl.edu	37	1	41012818	41012818	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	41012818	41012818	G	T	SNP	ZNF684	ENST00000372699	human	ensembl	74_37	+1	known	nonsense	c.823	p.E275*	0.556	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF684	HGNC	ENSG00000117010	tier1	-	-	62	0	0.00	39	4	9.30
MIR205HG	0	genome.wustl.edu	37	1	209605637	209605648	+	RNA	DEL	AGCAGCAGCAGC	AGCAGCAGCAGC	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	AGCAGCAGCAGC	AGCAGCAGCAGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	209605637	209605648	AGCAGCAGCAGC	-	DEL	MIR205HG	ENST00000366437	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.002:0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	MIR205HG	HGNC	ENSG00000230937	tier1			NA	NA	NA	NA	NA	NA
SECISBP2L	0	genome.wustl.edu	37	15	49301523	49301523	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	49301523	49301523	G	T	SNP	SECISBP2L	ENST00000559471	human	ensembl	74_37	-1	known	missense	c.1917	p.N639K	0.997	NULL	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2L	HGNC	ENSG00000138593	tier1	-	-	47	0	0.00	27	4	12.90
CYP4F11	0	genome.wustl.edu	37	19	16024597	16024597	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	19	16024597	16024597	C	T	SNP	CYP4F11	ENST00000248041	human	ensembl	74_37	-1	known	missense	c.1520	p.R507H	0.800	superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F11	HGNC	ENSG00000171903	tier1	-	-	79	0	0.00	27	12	30.77
FBLN2	0	genome.wustl.edu	37	3	13611824	13611824	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	13611824	13611824	G	C	SNP	FBLN2	ENST00000535798	human	ensembl	74_37	+1	known	missense	c.47	p.R16T	0.004	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1	-	-	35	0	0.00	19	6	24.00
STT3A	0	genome.wustl.edu	37	11	125472725	125472725	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	125472725	125472725	A	C	SNP	STT3A	ENST00000392708	human	ensembl	74_37	+1	known	missense	c.299	p.Y100S	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3A	HGNC	ENSG00000134910	tier1	-	-	59	0	0.00	32	8	20.00
LZTR1	0	genome.wustl.edu	37	22	21336825	21336825	+	Silent	SNP	G	G	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	22	21336825	21336825	G	C	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	silent	c.165	p.R55	0.999	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	141	0	0.00	76	24	24.00
ENSG00000221319	0	genome.wustl.edu	37	20	29637246	29637247	+	RNA	DEL	TA	TA	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	20	29637246	29637247	TA	-	DEL	ENSG00000221319	ENST00000408392	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.029:0.028	-	-	-	no_errors	AL441988.1	Clone_based_ensembl_gene	ENSG00000221319	tier1			128	0	0.00	71	24	25.26
HIP1	0	genome.wustl.edu	37	7	75185340	75185340	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	75185340	75185340	G	A	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	missense	c.1817	p.A606V	0.018	NULL	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946	tier1	-	-	42	0	0.00	27	3	10.00
GOLGA6L4	0	genome.wustl.edu	37	15	82932257	82932288	+	RNA	DEL	ACACAAATAAATTTAAACTATAAATTAGAAAC	ACACAAATAAATTTAAACTATAAATTAGAAAC	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	ACACAAATAAATTTAAACTATAAATTAGAAAC	ACACAAATAAATTTAAACTATAAATTAGAAAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	82932257	82932288	ACACAAATAAATTTAAACTATAAATTAGAAAC	-	DEL	GOLGA6L4	ENST00000560844	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.140:0.148:0.154:0.160:0.165:0.169:0.172:0.175:0.177:0.178:0.179:0.179:0.180:0.179:0.135:0.131:0.126:0.121:0.112:0.097:0.077:0.050:0.041:0.040:0.045:0.047:0.048:0.046:0.049:0.052:0.050:0.046	-	-	-	no_errors	RP13-996F3.5	Clone_based_vega_gene	ENSG00000215749	tier1			NA	NA	NA	NA	NA	NA
CPT2	0	genome.wustl.edu	37	1	53668131	53668131	+	RNA	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	53668131	53668131	C	A	SNP	CPT2	ENST00000468572	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CPT2	HGNC	ENSG00000157184	tier1	-	-	75	0	0.00	20	7	25.93
HP1BP3	0	genome.wustl.edu	37	1	21106864	21106864	+	Silent	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	21106864	21106864	G	A	SNP	HP1BP3	ENST00000312239	human	ensembl	74_37	-1	known	silent	c.70	p.L24	1.000	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15	-	no_errors	HP1BP3	HGNC	ENSG00000127483	tier1	-	-	110	0	0.00	35	4	10.26
SEC24A	0	genome.wustl.edu	37	5	134050773	134050773	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	5	134050773	134050773	A	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	missense	c.2787	p.Q929H	1.000	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	tier1	-	-	77	0	0.00	38	29	43.28
NPC1L1	0	genome.wustl.edu	37	7	44578865	44578865	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	44578865	44578865	C	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	silent	c.1131	p.T377	0.015	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520	tier1	-	-	55	0	0.00	37	4	9.76
ENPP1	0	genome.wustl.edu	37	6	132185704	132185704	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	132185704	132185704	G	A	SNP	ENPP1	ENST00000360971	human	ensembl	74_37	+1	known	missense	c.1084	p.D362N	0.907	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594	tier1	-	-	19	0	0.00	13	4	23.53
HINFP	0	genome.wustl.edu	37	11	119004898	119004898	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	119004898	119004898	T	C	SNP	HINFP	ENST00000350777	human	ensembl	74_37	+1	known	missense	c.1244	p.L415P	0.130	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HINFP	HGNC	ENSG00000172273	tier1	-	-	56	0	0.00	20	3	13.04
BRDT	0	genome.wustl.edu	37	1	92470012	92470012	+	Silent	SNP	C	C	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	92470012	92470012	C	G	SNP	BRDT	ENST00000362005	human	ensembl	74_37	+1	known	silent	c.2430	p.G810	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948	tier1	-	-	65	0	0.00	39	4	9.30
SURF2	0	genome.wustl.edu	37	9	136226880	136226882	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	9	136226880	136226882	GGA	-	DEL	SURF2	ENST00000371964	human	ensembl	74_37	+1	known	in_frame_del	c.392_394	p.R135in_frame_del	0.001:0.001:0.000	pfam_Surf2	pfam_Surf2	-	no_errors	SURF2	HGNC	ENSG00000148291	tier1			48	0	0.00	28	3	9.68
MT1L	0	genome.wustl.edu	37	16	56652634	56652634	+	RNA	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	16	56652634	56652634	G	A	SNP	MT1L	ENST00000565768	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MT1L	HGNC	ENSG00000260549	tier1	-	-	50	0	0.00	33	4	10.81
SCN7A	0	genome.wustl.edu	37	2	167263047	167263047	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	167263047	167263047	C	T	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	silent	c.4092	p.K1364	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	tier1	-	-	70	0	0.00	25	17	40.48
GVINP1	0	genome.wustl.edu	37	11	6739019	6739019	+	RNA	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	6739019	6739019	T	C	SNP	GVINP1	ENST00000526769	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	GVINP1	HGNC	ENSG00000254838	tier1	-	-	21	0	0.00	8	3	27.27
MYL6	0	genome.wustl.edu	37	12	56553456	56553456	+	Silent	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	12	56553456	56553456	G	T	SNP	MYL6	ENST00000547649	human	ensembl	74_37	+1	known	silent	c.117	p.L39	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL6	HGNC	ENSG00000092841	tier1	-	-	131	0	0.00	44	4	8.00
GRIK3	0	genome.wustl.edu	37	1	37267481	37267481	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	37267481	37267481	T	G	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.2731	p.S911R	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1	-	-	30	0	0.00	13	4	23.53
ENSG00000238411	0	genome.wustl.edu	37	21	9683195	9683195	+	RNA	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	21	9683195	9683195	G	A	SNP	ENSG00000238411	ENST00000459169	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.002	-	-	-	no_errors	CR381670.1	Clone_based_ensembl_gene	ENSG00000238411	tier1	-	-	14	0	0.00	11	6	35.29
KLHL36	0	genome.wustl.edu	37	16	84695592	84695592	+	Silent	SNP	C	C	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	16	84695592	84695592	C	T	SNP	KLHL36	ENST00000564996	human	ensembl	74_37	+1	known	silent	c.1704	p.Y568	0.995	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686	tier1	-	-	85	0	0.00	46	4	8.00
CCDC13	0	genome.wustl.edu	37	3	42793507	42793507	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	42793507	42793507	G	A	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	missense	c.524	p.A175V	0.013	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607	tier1	-	-	31	0	0.00	12	3	18.75
ABHD11	0	genome.wustl.edu	37	7	73150897	73150897	+	Silent	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	73150897	73150897	G	A	SNP	ABHD11	ENST00000222800	human	ensembl	74_37	-1	known	silent	c.940	p.L314	1.000	NULL	pfam_AB_hydrolase_1,pfam_PGAP1-like,pfam_Thioesterase,pfam_Esterase_put,prints_AB_hydrolase_1	-	no_errors	ABHD11	HGNC	ENSG00000106077	tier1	-	-	54	0	0.00	36	4	10.00
PLCB2	0	genome.wustl.edu	37	15	40590121	40590121	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	40590121	40590121	A	G	SNP	PLCB2	ENST00000260402	human	ensembl	74_37	-1	known	missense	c.1195	p.S399P	1.000	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLC-beta_C,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB2	HGNC	ENSG00000137841	tier1	-	-	81	0	0.00	49	5	9.26
IL37	0	genome.wustl.edu	37	2	113676368	113676368	+	Silent	SNP	C	C	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	2	113676368	113676368	C	A	SNP	IL37	ENST00000263326	human	ensembl	74_37	+1	known	silent	c.639	p.P213	0.000	NULL	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1,prints_IL-1RA/IL-36	-	no_errors	IL37	HGNC	ENSG00000125571	tier1	-	-	25	0	0.00	13	9	40.91
MDC1	0	genome.wustl.edu	37	6	30679822	30679822	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	30679822	30679822	G	T	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.1897	p.Q633K	0.019	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337	tier1	-	-	47	0	0.00	37	4	9.76
ENSG00000267387	0	genome.wustl.edu	37	19	10200774	10200774	+	RNA	SNP	T	T	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	19	10200774	10200774	T	C	SNP	ENSG00000267387	ENST00000589622	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2240E14.4	Clone_based_vega_gene	ENSG00000267387	tier1	-	-	30	0	0.00	23	4	14.81
TET1	0	genome.wustl.edu	37	10	70432803	70432803	+	Splice_Site	SNP	G	G	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	10	70432803	70432803	G	A	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	splice_site	c.4824+1	e7+1	1.000	-	-	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	86	0	0.00	32	3	8.57
HSPG2	0	genome.wustl.edu	37	1	22168130	22168130	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	22168130	22168130	G	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.9230	p.T3077N	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	89	0	0.00	33	4	10.81
RNPC3	0	genome.wustl.edu	37	1	104076466	104076467	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	104076466	104076467	-	A	INS	RNPC3	ENST00000423855	human	ensembl	74_37	+1	known	frame_shift_ins	c.346_347	p.K120fs	0.748:0.784	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	tier1			46	0	0.00	31	6	16.22
CTDSPL2	0	genome.wustl.edu	37	15	44811494	44811494	+	Splice_Site	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	15	44811494	44811494	G	T	SNP	CTDSPL2	ENST00000260327	human	ensembl	74_37	+1	known	splice_site	c.1239+1	e10+1	1.000	-	-	-	no_errors	CTDSPL2	HGNC	ENSG00000137770	tier1	-	-	114	0	0.00	46	24	34.29
ZNF423	0	genome.wustl.edu	37	16	49671660	49671660	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	16	49671660	49671660	G	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.1403	p.A468D	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	64	0	0.00	38	4	9.52
CD81	0	genome.wustl.edu	37	11	2417894	2417894	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	2417894	2417894	G	C	SNP	CD81	ENST00000263645	human	ensembl	74_37	+1	known	missense	c.598	p.G200R	0.081	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	CD81	HGNC	ENSG00000110651	tier1	-	-	49	0	0.00	26	11	29.73
ZIC4	0	genome.wustl.edu	37	3	147124340	147124340	+	RNA	SNP	A	A	C			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	3	147124340	147124340	A	C	SNP	ZIC4	ENST00000464144	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	103	0	0.00	61	7	10.29
ENSG00000258428	0	genome.wustl.edu	37	14	57099977	57099977	+	RNA	DEL	T	T	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	14	57099977	57099977	T	-	DEL	ENSG00000258428	ENST00000553800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-1085N6.2	Clone_based_vega_gene	ENSG00000258428	tier1			20	0	0.00	17	4	19.05
ABCC8	0	genome.wustl.edu	37	11	17449472	17449472	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	11	17449472	17449472	G	T	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.2058	p.F686L	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	63	0	0.00	40	4	9.09
SPATA42	0	genome.wustl.edu	37	1	109400923	109400924	+	RNA	INS	-	-	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	1	109400923	109400924	-	T	INS	SPATA42	ENST00000417241	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SPATA42	HGNC	ENSG00000203897	tier1			11	0	0.00	9	4	30.77
GNE	0	genome.wustl.edu	37	9	36246334	36246334	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	9	36246334	36246334	G	T	SNP	GNE	ENST00000396594	human	ensembl	74_37	-1	known	missense	c.403	p.P135T	1.000	pfam_UDP_GlcNAc_Epimerase_2,tigrfam_UDP-GlcNAc_Epase	pfam_UDP_GlcNAc_Epimerase_2,pfam_ROK,prints_Hexokinase,tigrfam_UDP-GlcNAc_Epase	-	no_errors	GNE	HGNC	ENSG00000159921	tier1	-	-	40	0	0.00	20	3	13.04
MYO6	0	genome.wustl.edu	37	6	76599857	76599858	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	76599857	76599858	-	A	INS	MYO6	ENST00000369981	human	ensembl	74_37	+1	known	frame_shift_ins	c.2742_2743	p.Q917fs	1.000:1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586	tier1			50	0	0.00	24	5	17.24
MPP5	0	genome.wustl.edu	37	14	67787071	67787071	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	14	67787071	67787071	G	T	SNP	MPP5	ENST00000261681	human	ensembl	74_37	+1	known	missense	c.1494	p.R498S	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_N,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,pfam_L27_C,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP5	HGNC	ENSG00000072415	tier1	-	-	60	0	0.00	41	4	8.89
ARHGAP10	0	genome.wustl.edu	37	4	148876500	148876500	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	4	148876500	148876500	A	T	SNP	ARHGAP10	ENST00000336498	human	ensembl	74_37	+1	known	missense	c.1425	p.L475F	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP10	HGNC	ENSG00000071205	tier1	-	-	51	0	0.00	68	9	11.69
BAZ1B	0	genome.wustl.edu	37	7	72912943	72912943	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	7	72912943	72912943	G	T	SNP	BAZ1B	ENST00000339594	human	ensembl	74_37	-1	known	missense	c.455	p.S152Y	0.999	NULL	pfam_WSTF_Acf1_Cbp146,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_WSTF_Acf1_Cbp146,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ1B	HGNC	ENSG00000009954	tier1	-	-	39	0	0.00	46	4	8.00
ITPR3	0	genome.wustl.edu	37	6	33646250	33646250	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	6	33646250	33646250	A	G	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.3701	p.K1234R	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433	tier1	-	-	37	0	0.00	22	16	42.11
MYH8	0	genome.wustl.edu	37	17	10323509	10323509	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A7EL-01A-12D-A36J-09	TCGA-DX-A7EL-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ac690007-d6de-4a5c-b7fc-72c128815ebe	26b5714d-b99a-4e34-9e74-e7746a0bd867	17	10323509	10323509	A	-	DEL	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	frame_shift_del	c.36	p.F12fs	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	tier1			33	0	0.00	19	3	13.64
