Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ZNF444	0	genome.wustl.edu	37	19	56671273	56671281	+	In_Frame_Del	DEL	CCCCGGCAG	CCCCGGCAG	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	CCCCGGCAG	CCCCGGCAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	56671273	56671281	CCCCGGCAG	-	DEL	ZNF444	ENST00000337080	human	ensembl	74_37	+1	known	in_frame_del	c.687_695	p.PGS233in_frame_del	0.998:0.996:0.995:0.994:0.994:0.994:0.994:0.995:0.997	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF444	HGNC	ENSG00000167685	tier1			NA	NA	NA	NA	NA	NA
LINC00032	0	genome.wustl.edu	37	9	27247404	27247404	+	RNA	SNP	T	T	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	9	27247404	27247404	T	A	SNP	LINC00032	ENST00000425633	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	LINC00032	HGNC	ENSG00000231459	tier1	-	-	39	0	0.00	3	22	88.00
ZHX2	0	genome.wustl.edu	37	8	123964551	123964551	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	8	123964551	123964551	C	-	DEL	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	frame_shift_del	c.801	p.Y267fs	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764	tier1			57	0	0.00	39	26	40.00
MT-RNR2	0	genome.wustl.edu	37	MT	2747	2747	+	RNA	SNP	T	T	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	MT	2747	2747	T	C	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	3456	0	0.00	1123	173	13.34
BOLL	0	genome.wustl.edu	37	2	198607837	198607837	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	198607837	198607837	G	A	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	missense	c.812	p.A271V	1.000	NULL	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	43	0	0.00	4	8	66.67
STAG1	0	genome.wustl.edu	37	3	136261014	136261014	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	3	136261014	136261014	G	A	SNP	STAG1	ENST00000383202	human	ensembl	74_37	-1	known	nonsense	c.418	p.R140*	1.000	NULL	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	tier1	-	-	59	0	0.00	43	7	14.00
OR4C5	0	genome.wustl.edu	37	11	48387284	48387284	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	11	48387284	48387284	G	A	SNP	OR4C5	ENST00000319813	human	ensembl	74_37	-1	known	missense	c.734	p.S245L	0.092	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C5	HGNC	ENSG00000176540	tier1	-	-	40	0	0.00	45	6	11.76
GRM5-AS1	0	genome.wustl.edu	37	11	88241643	88241643	+	RNA	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	11	88241643	88241643	G	A	SNP	GRM5-AS1	ENST00000526448	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GRM5-AS1	HGNC	ENSG00000255082	tier1	-	-	26	0	0.00	15	4	21.05
USP32P1	0	genome.wustl.edu	37	17	16706960	16706963	+	RNA	DEL	TAAT	TAAT	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	TAAT	TAAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	17	16706960	16706963	TAAT	-	DEL	USP32P1	ENST00000341745	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.734:0.743:0.823:0.867	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933	tier1			29	0	0.00	33	3	8.33
ITGAL	0	genome.wustl.edu	37	16	30484205	30484205	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	16	30484205	30484205	G	T	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.47	p.G16V	0.464	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	48	0	0.00	45	4	8.16
SRGAP2B	0	genome.wustl.edu	37	1	144053567	144053567	+	RNA	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	144053567	144053567	C	T	SNP	SRGAP2B	ENST00000467933	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SRGAP2B	HGNC	ENSG00000196369	tier1	rs202144114	-	33	0	0.00	33	5	13.16
ENSG00000239179	0	genome.wustl.edu	37	21	9937745	9937745	+	RNA	SNP	A	A	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	21	9937745	9937745	A	C	SNP	ENSG00000239179	ENST00000458847	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	CR392039.2	Clone_based_ensembl_gene	ENSG00000239179	tier1	-	-	18	0	0.00	14	4	22.22
KIF1B	0	genome.wustl.edu	37	1	10403307	10403307	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	10403307	10403307	G	A	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.3512	p.R1171H	0.999	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	tier1	-	-	71	0	0.00	65	14	17.72
BRD8	0	genome.wustl.edu	37	5	137502401	137502401	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	5	137502401	137502401	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	missense	c.803	p.S268F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983	tier1	-	-	31	0	0.00	20	19	48.72
CCDC23	0	genome.wustl.edu	37	1	43273167	43273167	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	43273167	43273167	T	C	SNP	CCDC23	ENST00000372521	human	ensembl	74_37	-1	known	missense	c.119	p.Y40C	1.000	NULL	NULL	-	no_errors	CCDC23	HGNC	ENSG00000177868	tier1	-	-	54	0	0.00	57	6	9.52
TTN	0	genome.wustl.edu	37	2	179435239	179435239	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	179435239	179435239	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.67916	p.P22639L	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	46	0	0.00	21	9	30.00
CYP4F12	0	genome.wustl.edu	37	19	15807832	15807832	+	Silent	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	15807832	15807832	G	A	SNP	CYP4F12	ENST00000324632	human	ensembl	74_37	+1	known	silent	c.1512	p.L504	0.967	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC	ENSG00000186204	tier1	-	-	148	1	0.67	120	12	9.09
AKR1D1	0	genome.wustl.edu	37	7	137776523	137776523	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	7	137776523	137776523	A	G	SNP	AKR1D1	ENST00000242375	human	ensembl	74_37	+1	known	missense	c.271	p.T91A	0.996	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1D1	HGNC	ENSG00000122787	tier1	-	-	77	0	0.00	39	31	44.29
HIPK1	0	genome.wustl.edu	37	1	114506024	114506024	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	114506024	114506024	C	A	SNP	HIPK1	ENST00000369558	human	ensembl	74_37	+1	known	missense	c.2119	p.L707I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK1	HGNC	ENSG00000163349	tier1	-	-	100	0	0.00	58	42	42.00
UBXN10	0	genome.wustl.edu	37	1	20517676	20517676	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	20517676	20517676	G	T	SNP	UBXN10	ENST00000375099	human	ensembl	74_37	+1	known	missense	c.622	p.G208C	0.999	pfam_UBX,smart_UBX,pfscan_UBX	pfam_UBX,smart_UBX,pfscan_UBX	-	no_errors	UBXN10	HGNC	ENSG00000162543	tier1	-	-	32	0	0.00	19	3	13.64
PREX2	0	genome.wustl.edu	37	8	69030858	69030858	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	8	69030858	69030858	C	A	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.3400	p.H1134N	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	87	0	0.00	68	8	10.53
SEMA4D	0	genome.wustl.edu	37	9	92006299	92006299	+	Silent	SNP	T	T	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	9	92006299	92006299	T	C	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	silent	c.654	p.R218	0.012	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764	tier1	-	-	35	0	0.00	8	8	50.00
MMP25	0	genome.wustl.edu	37	16	3100142	3100142	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	16	3100142	3100142	G	A	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	nonsense	c.365	p.W122*	1.000	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP25	HGNC	ENSG00000008516	tier1	-	-	61	0	0.00	75	7	8.43
EEF1A1	0	genome.wustl.edu	37	6	74227622	74227622	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	6	74227622	74227622	C	T	SNP	EEF1A1	ENST00000309268	human	ensembl	74_37	-1	known	missense	c.1300	p.A434T	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C,tigrfam_Transl_elong_EF1A_euk/arc	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EF1A_euk/arc	-	no_errors	EEF1A1	HGNC	ENSG00000156508	tier1	-	-	119	0	0.00	85	64	42.67
DSP	0	genome.wustl.edu	37	6	7581360	7581360	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	6	7581360	7581360	A	-	DEL	DSP	ENST00000379802	human	ensembl	74_37	+1	known	frame_shift_del	c.4937	p.K1647fs	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1			35	0	0.00	20	2	9.09
COL24A1	0	genome.wustl.edu	37	1	86362070	86362070	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	86362070	86362070	A	G	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	missense	c.2801	p.L934P	0.989	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502	tier1	-	-	40	0	0.00	52	6	10.34
SLC26A9	0	genome.wustl.edu	37	1	205897159	205897159	+	Silent	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	205897159	205897159	C	T	SNP	SLC26A9	ENST00000340781	human	ensembl	74_37	-1	known	silent	c.972	p.S324	0.001	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502	tier1	rs147218911	-	59	0	0.00	27	24	45.28
TM2D3	0	genome.wustl.edu	37	15	102186981	102186981	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	15	102186981	102186981	G	T	SNP	TM2D3	ENST00000333202	human	ensembl	74_37	-1	known	missense	c.449	p.P150H	1.000	NULL	pfam_TM2	-	no_errors	TM2D3	HGNC	ENSG00000184277	tier1	-	-	45	0	0.00	43	4	8.51
LOC101927285	0	genome.wustl.edu	37	2	59504881	59504881	+	RNA	SNP	G	G	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	59504881	59504881	G	C	SNP	LOC101927285	ENST00000409590	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.215	-	-	-	no_errors	AC007131.1	Clone_based_vega_gene	ENSG00000222030	tier1	rs78259922	-	11	0	0.00	4	4	50.00
RPRD1B	0	genome.wustl.edu	37	20	36718299	36718299	+	RNA	SNP	T	T	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	20	36718299	36718299	T	A	SNP	RPRD1B	ENST00000471511	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPRD1B	HGNC	ENSG00000101413	tier1	-	-	46	0	0.00	28	37	56.92
CGB	0	genome.wustl.edu	37	19	49526360	49526360	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	49526360	49526360	C	T	SNP	CGB	ENST00000357383	human	ensembl	74_37	-1	known	missense	c.281	p.R94H	0.993	pfam_Cys_knot,smart_Gonadotropin_bsu	pfam_Cys_knot,smart_Gonadotropin_bsu	-	no_errors	CGB	HGNC	ENSG00000104827	tier1	-	-	41	0	0.00	7	22	75.86
ADCY9	0	genome.wustl.edu	37	16	4033317	4033317	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	16	4033317	4033317	G	A	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	missense	c.2435	p.A812V	0.014	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104	tier1	-	-	45	0	0.00	19	26	57.78
MT-TL1	0	genome.wustl.edu	37	MT	3243	3243	+	RNA	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	MT	3243	3243	A	G	SNP	MT-TL1	ENST00000386347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TL1	HGNC	ENSG00000209082	tier1	rs199474657	-	40	0	0.00	0	21	100.00
PBX3	0	genome.wustl.edu	37	9	128678030	128678030	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	9	128678030	128678030	A	G	SNP	PBX3	ENST00000373489	human	ensembl	74_37	+1	known	missense	c.340	p.M114V	1.000	pfam_PBX	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX3	HGNC	ENSG00000167081	tier1	-	-	71	0	0.00	38	37	49.33
ENSG00000216116	0	genome.wustl.edu	37	3	79633761	79633762	+	RNA	DEL	GT	GT	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	3	79633761	79633762	GT	-	DEL	ENSG00000216116	ENST00000401297	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	AC117479.1	Clone_based_ensembl_gene	ENSG00000216116	tier1			38	0	0.00	31	4	11.43
PSG1	0	genome.wustl.edu	37	19	43373052	43373052	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	43373052	43373052	C	A	SNP	PSG1	ENST00000312439	human	ensembl	74_37	-1	known	missense	c.844	p.V282F	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG1	HGNC	ENSG00000231924	tier1	-	-	209	0	0.00	79	71	47.33
C6orf118	0	genome.wustl.edu	37	6	165693595	165693595	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	6	165693595	165693595	G	T	SNP	C6orf118	ENST00000230301	human	ensembl	74_37	-1	known	missense	c.1361	p.P454H	0.000	NULL	superfamily_Ribonuclease/ribotoxin	-	no_errors	C6orf118	HGNC	ENSG00000112539	tier1	-	-	62	0	0.00	45	4	8.16
HELZ2	0	genome.wustl.edu	37	20	62202620	62202620	+	RNA	SNP	A	A	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	20	62202620	62202620	A	C	SNP	HELZ2	ENST00000479540	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.503	-	-	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	39	0	0.00	35	5	12.50
REPIN1	0	genome.wustl.edu	37	7	150069822	150069822	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	7	150069822	150069822	C	G	SNP	REPIN1	ENST00000489432	human	ensembl	74_37	+1	known	missense	c.1663	p.Q555E	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REPIN1	HGNC	ENSG00000214022	tier1	-	-	47	0	0.00	45	4	8.16
ERBB2	0	genome.wustl.edu	37	17	37864783	37864783	+	Silent	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	17	37864783	37864783	C	T	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	silent	c.435	p.L145	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	58	0	0.00	33	6	15.38
HSP90AA4P	0	genome.wustl.edu	37	4	190395127	190395127	+	RNA	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	4	190395127	190395127	G	A	SNP	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100	tier1	-	-	67	0	0.00	44	4	8.33
CD3EAP	0	genome.wustl.edu	37	19	45912490	45912492	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	45912490	45912492	AAG	-	DEL	CD3EAP	ENST00000589804	human	ensembl	74_37	+1	known	in_frame_del	c.1270_1272	p.K427in_frame_del	0.656:0.828:0.908	NULL	pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	CD3EAP	HGNC	ENSG00000117877	tier1			36	0	0.00	28	4	12.50
CBWD1	0	genome.wustl.edu	37	9	121796	121796	+	RNA	SNP	C	C	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	9	121796	121796	C	A	SNP	CBWD1	ENST00000475990	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CBWD1	HGNC	ENSG00000172785	tier1	-	-	102	1	0.97	32	25	43.86
MTRF1	0	genome.wustl.edu	37	13	41834665	41834665	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	13	41834665	41834665	C	T	SNP	MTRF1	ENST00000430347	human	ensembl	74_37	-1	known	missense	c.418	p.E140K	0.942	NULL	pfam_Pep_chain_release_fac_I_II,pfam_PCRF,smart_PCRF	-	no_errors	MTRF1	HGNC	ENSG00000120662	tier1	-	-	62	0	0.00	45	5	10.00
MIER2	0	genome.wustl.edu	37	19	306713	306713	+	Splice_Site	SNP	T	T	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	306713	306713	T	A	SNP	MIER2	ENST00000264819	human	ensembl	74_37	-1	known	splice_site	c.1617-2	e14-2	0.997	-	-	-	no_errors	MIER2	HGNC	ENSG00000105556	tier1	-	-	61	0	0.00	41	43	51.19
PITPNM1	0	genome.wustl.edu	37	11	67259587	67259587	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	11	67259587	67259587	G	A	SNP	PITPNM1	ENST00000356404	human	ensembl	74_37	-1	known	missense	c.3652	p.R1218C	0.933	NULL	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM1	HGNC	ENSG00000110697	tier1	-	-	134	0	0.00	55	53	49.07
MT-RNR2	0	genome.wustl.edu	37	MT	3052	3052	+	RNA	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	MT	3052	3052	A	G	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	123	0	0.00	56	7	11.11
LOC101927498	0	genome.wustl.edu	37	1	83451871	83451871	+	RNA	SNP	A	A	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	1	83451871	83451871	A	T	SNP	LOC101927498	ENST00000421931	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-170N11.1	Clone_based_vega_gene	ENSG00000236268	tier1	-	-	137	0	0.00	80	29	26.61
ADAM5	0	genome.wustl.edu	37	8	39239107	39239107	+	RNA	SNP	T	T	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	8	39239107	39239107	T	A	SNP	ADAM5	ENST00000359790	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.140	-	-	-	no_errors	ADAM5	HGNC	ENSG00000196115	tier1	-	-	72	0	0.00	44	26	36.62
C9orf117	0	genome.wustl.edu	37	9	130471904	130471904	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	9	130471904	130471904	A	C	SNP	C9orf117	ENST00000373295	human	ensembl	74_37	+1	known	missense	c.365	p.Q122P	1.000	NULL	NULL	-	no_errors	C9orf117	HGNC	ENSG00000160401	tier1	-	-	43	0	0.00	41	4	8.89
ANK2	0	genome.wustl.edu	37	4	114288730	114288730	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	4	114288730	114288730	G	A	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.11041	p.V3681I	0.168	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	tier1	-	-	49	0	0.00	24	15	38.46
GPR158	0	genome.wustl.edu	37	10	25877983	25877983	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	10	25877983	25877983	C	T	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.1801	p.R601W	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1	-	-	95	0	0.00	54	42	43.75
ZFP30	0	genome.wustl.edu	37	19	38126321	38126321	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	38126321	38126321	C	T	SNP	ZFP30	ENST00000351218	human	ensembl	74_37	-1	known	missense	c.1121	p.R374K	0.996	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP30	HGNC	ENSG00000120784	tier1	-	-	47	0	0.00	22	20	47.62
RICTOR	0	genome.wustl.edu	37	5	38982076	38982076	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	5	38982076	38982076	T	G	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.646	p.I216L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	105	0	0.00	79	41	34.17
RNF212	0	genome.wustl.edu	37	4	1087327	1087328	+	In_Frame_Ins	INS	-	-	CTGCCCAGGCTGGAGCCAGCC			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	4	1087327	1087328	-	CTGCCCAGGCTGGAGCCAGCC	INS	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	in_frame_ins	c.722_721	p.S241in_frame_insWLAPAWAA	0.085:0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222	tier1			NA	NA	NA	NA	NA	NA
GPR132	0	genome.wustl.edu	37	14	105517724	105517724	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	14	105517724	105517724	G	C	SNP	GPR132	ENST00000329797	human	ensembl	74_37	-1	known	missense	c.750	p.I250M	1.000	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_G2A_lysphc_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR132	HGNC	ENSG00000183484	tier1	-	-	35	0	0.00	14	12	46.15
ZNF2	0	genome.wustl.edu	37	2	95847067	95847067	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	95847067	95847067	G	A	SNP	ZNF2	ENST00000340539	human	ensembl	74_37	+1	known	missense	c.494	p.R165K	0.427	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF2	HGNC	ENSG00000163067	tier1	-	-	122	0	0.00	76	37	32.46
ZNF862	0	genome.wustl.edu	37	7	149545354	149545354	+	Silent	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	7	149545354	149545354	C	T	SNP	ZNF862	ENST00000223210	human	ensembl	74_37	+1	known	silent	c.772	p.L258	0.997	NULL	pfam_Krueppel-associated_box,pfam_HATC_dom_C,superfamily_Krueppel-associated_box,superfamily_RNaseH-like_dom,smart_Krueppel-associated_box,smart_Znf_TTF,pfscan_Krueppel-associated_box	-	no_errors	ZNF862	HGNC	ENSG00000106479	tier1	-	-	78	0	0.00	45	10	18.18
ENSG00000250740	0	genome.wustl.edu	37	4	106848394	106848395	+	RNA	INS	-	-	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	4	106848394	106848395	-	T	INS	ENSG00000250740	ENST00000511059	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-710F7.2	Clone_based_vega_gene	ENSG00000250740	tier1			16	0	0.00	13	4	23.53
PLA2G4C	0	genome.wustl.edu	37	19	48613997	48613998	+	RNA	INS	-	-	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	19	48613997	48613998	-	G	INS	PLA2G4C	ENST00000594156	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.033:0.032	-	-	-	no_errors	PLA2G4C	HGNC	ENSG00000105499	tier1			9	0	0.00	6	5	45.45
OTOP2	0	genome.wustl.edu	37	17	72927065	72927065	+	Silent	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	17	72927065	72927065	C	T	SNP	OTOP2	ENST00000331427	human	ensembl	74_37	+1	known	silent	c.1335	p.D445	0.952	NULL	pfam_Otopetrin	-	no_errors	OTOP2	HGNC	ENSG00000183034	tier1	-	-	82	0	0.00	39	12	23.53
MYF5	0	genome.wustl.edu	37	12	81111289	81111289	+	Silent	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	12	81111289	81111289	G	A	SNP	MYF5	ENST00000228644	human	ensembl	74_37	+1	known	silent	c.447	p.P149	0.888	pfam_Myf5,superfamily_bHLH_dom	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYF5	HGNC	ENSG00000111049	tier1	-	-	58	0	0.00	30	28	48.28
STK10	0	genome.wustl.edu	37	5	171533797	171533797	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	5	171533797	171533797	C	T	SNP	STK10	ENST00000176763	human	ensembl	74_37	-1	known	missense	c.615	p.M205I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_PKK,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK10	HGNC	ENSG00000072786	tier1	-	-	34	0	0.00	26	4	12.90
EHBP1	0	genome.wustl.edu	37	2	63175630	63175630	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	63175630	63175630	A	G	SNP	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	missense	c.1754	p.Y585C	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504	tier1	-	-	32	0	0.00	15	11	42.31
PXDC1	0	genome.wustl.edu	37	6	3739162	3739162	+	RNA	SNP	G	G	A			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	6	3739162	3739162	G	A	SNP	PXDC1	ENST00000485986	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	PXDC1	HGNC	ENSG00000168994	tier1	-	-	52	0	0.00	26	16	38.10
ANKRD20A5P	0	genome.wustl.edu	37	18	14184171	14184171	+	RNA	SNP	A	A	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	18	14184171	14184171	A	T	SNP	ANKRD20A5P	ENST00000581935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ANKRD20A5P	HGNC	ENSG00000186481	tier1	-	-	119	0	0.00	53	34	38.64
NMUR1	0	genome.wustl.edu	37	2	232393509	232393509	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	2	232393509	232393509	C	T	SNP	NMUR1	ENST00000305141	human	ensembl	74_37	-1	known	missense	c.223	p.A75T	0.166	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_1,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR1	HGNC	ENSG00000171596	tier1	-	-	39	0	0.00	30	4	11.76
GABRP	0	genome.wustl.edu	37	5	170236578	170236578	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	5	170236578	170236578	C	T	SNP	GABRP	ENST00000265294	human	ensembl	74_37	+1	known	missense	c.839	p.T280M	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAp_rcpt,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRP	HGNC	ENSG00000094755	tier1	-	-	126	0	0.00	58	53	47.75
FCF1	0	genome.wustl.edu	37	14	75190037	75190037	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EQ-01A-11D-A387-09	TCGA-DX-A7EQ-11B-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	41948940-1e2e-4f0d-bc61-bd6d41e027a0	5f13aa05-d3b4-4a3c-be59-99ea03f2a5f7	14	75190037	75190037	G	T	SNP	FCF1	ENST00000341162	human	ensembl	74_37	+1	known	missense	c.355	p.V119L	1.000	pfam_Fcf1/Utp23,smart_PIN_dom	pfam_Fcf1/Utp23,smart_PIN_dom	-	no_errors	FCF1	HGNC	ENSG00000119616	tier1	-	-	70	0	0.00	44	13	22.81
