Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
PLEKHM2	0	genome.wustl.edu	37	1	16054148	16054148	+	Silent	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	16054148	16054148	G	T	SNP	PLEKHM2	ENST00000375799	human	ensembl	74_37	+1	known	silent	c.1581	p.L527	0.091	NULL	pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	36	0	0.00	44	4	8.33
MDM2	0	genome.wustl.edu	37	12	69210612	69210612	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	69210612	69210612	G	A	SNP	MDM2	ENST00000462284	human	ensembl	74_37	+1	known	silent	c.195	p.Q65	1.000	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4	pfam_SWIB_MDM2_domain,pfam_Znf_RanBP2,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2,pfscan_Znf_RING	-	no_errors	MDM2	HGNC	ENSG00000135679	tier1	-	-	50	0	0.00	41	4	8.89
MTX1	0	genome.wustl.edu	37	1	155178611	155178611	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	155178611	155178611	C	-	DEL	MTX1	ENST00000368376	human	ensembl	74_37	+1	known	frame_shift_del	c.16	p.R8fs	0.998	NULL	pfam_Sam37/metaxin,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	MTX1	HGNC	ENSG00000173171	tier1			13	0	0.00	6	2	25.00
TNKS2	0	genome.wustl.edu	37	10	93576932	93576932	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	93576932	93576932	G	T	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.466	p.D156Y	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854	tier1	-	-	29	0	0.00	28	5	15.15
DEC1	0	genome.wustl.edu	37	9	118068191	118068191	+	RNA	SNP	T	T	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	9	118068191	118068191	T	A	SNP	DEC1	ENST00000477580	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.409	-	-	-	no_errors	DEC1	HGNC	ENSG00000173077	tier1	-	-	58	0	0.00	45	4	8.16
ATRX	0	genome.wustl.edu	37	X	76872085	76872086	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	76872085	76872086	-	A	INS	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_ins	c.5562_5561	p.L1854fs	1.000:1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			106	0	0.00	35	30	46.15
FAM171A1	0	genome.wustl.edu	37	10	15256356	15256356	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	15256356	15256356	G	T	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	missense	c.1231	p.H411N	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	tier1	-	-	40	0	0.00	24	4	14.29
TMEM25	0	genome.wustl.edu	37	11	118402987	118402987	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	118402987	118402987	T	A	SNP	TMEM25	ENST00000533102	human	ensembl	74_37	+1	known	missense	c.193	p.W65R	1.000	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	TMEM25	HGNC	ENSG00000149582	tier1	-	-	33	0	0.00	33	4	10.81
PLG	0	genome.wustl.edu	37	6	161139335	161139335	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	6	161139335	161139335	C	A	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	missense	c.797	p.P266Q	0.475	pirsf_Pept_S1A_plasmin,superfamily_Kringle-like	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194	tier1	-	-	31	0	0.00	39	6	13.33
SNHG14	0	genome.wustl.edu	37	15	25226996	25226996	+	RNA	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	15	25226996	25226996	G	T	SNP	SNHG14	ENST00000551631	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	9	0	0.00	5	4	44.44
TMEM246	0	genome.wustl.edu	37	9	104238794	104238794	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	9	104238794	104238794	C	A	SNP	TMEM246	ENST00000374847	human	ensembl	74_37	-1	known	missense	c.581	p.C194F	1.000	NULL	NULL	-	no_errors	TMEM246	HGNC	ENSG00000165152	tier1	-	-	34	0	0.00	40	4	8.89
CAMK4	0	genome.wustl.edu	37	5	110560133	110560134	+	RNA	INS	-	-	GGCAGCGGCGGC			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	5	110560133	110560134	-	GGCAGCGGCGGC	INS	CAMK4	ENST00000509408	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033:0.224	-	-	-	no_errors	CAMK4	HGNC	ENSG00000152495	tier1			NA	NA	NA	NA	NA	NA
LOC101060604	0	genome.wustl.edu	37	16	21531204	21531204	+	RNA	SNP	G	G	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	16	21531204	21531204	G	C	SNP	LOC101060604	ENST00000435197	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2547E10.2	Clone_based_vega_gene	ENSG00000180747	tier1	-	-	161	0	0.00	137	32	18.93
DGCR8	0	genome.wustl.edu	37	22	20077333	20077333	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	22	20077333	20077333	G	T	SNP	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	missense	c.1022	p.R341L	1.000	NULL	pfam_dsRNA-bd_dom,superfamily_WW_dom,smart_WW_dom,smart_dsRNA-bd_dom,pfscan_WW_dom,pfscan_dsRNA-bd_dom	-	no_errors	DGCR8	HGNC	ENSG00000128191	tier1	-	-	32	0	0.00	31	4	11.43
DENND4B	0	genome.wustl.edu	37	1	153913520	153913520	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	153913520	153913520	C	T	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.1186	p.A396T	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	25	0	0.00	38	4	9.52
ATMIN	0	genome.wustl.edu	37	16	81078150	81078150	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	16	81078150	81078150	G	A	SNP	ATMIN	ENST00000299575	human	ensembl	74_37	+1	known	missense	c.2047	p.A683T	0.156	NULL	smart_Znf_C2H2-like	-	no_errors	ATMIN	HGNC	ENSG00000166454	tier1	-	-	36	0	0.00	19	3	13.64
RASA4CP	0	genome.wustl.edu	37	7	44073723	44073723	+	RNA	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	7	44073723	44073723	C	T	SNP	RASA4CP	ENST00000425524	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RASA4CP	HGNC	ENSG00000228903	tier1	-	-	110	0	0.00	97	10	9.35
SCN4B	0	genome.wustl.edu	37	11	118006825	118006826	+	RNA	INS	-	-	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	118006825	118006826	-	A	INS	SCN4B	ENST00000423160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SCN4B	HGNC	ENSG00000177098	tier1			11	0	0.00	6	4	40.00
XIST	0	genome.wustl.edu	37	X	73044010	73044010	+	RNA	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	73044010	73044010	G	T	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.053	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	24	0	0.00	15	4	21.05
CAPN2	0	genome.wustl.edu	37	1	223963659	223963659	+	RNA	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	223963659	223963659	C	T	SNP	CAPN2	ENST00000463997	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CAPN2	HGNC	ENSG00000162909	tier1	-	-	20	0	0.00	13	3	18.75
ABCC8	0	genome.wustl.edu	37	11	17427096	17427096	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	17427096	17427096	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.3347	p.T1116M	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	31	0	0.00	17	16	48.48
CACFD1	0	genome.wustl.edu	37	9	136330517	136330517	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	9	136330517	136330517	G	T	SNP	CACFD1	ENST00000540581	human	ensembl	74_37	+1	known	missense	c.268	p.A90S	0.969	pfam_TVP18/Ca-channel_flower	pfam_TVP18/Ca-channel_flower	-	no_errors	CACFD1	HGNC	ENSG00000160325	tier1	-	-	32	0	0.00	28	5	15.15
ENAH	0	genome.wustl.edu	37	1	225754957	225754957	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	225754957	225754957	G	T	SNP	ENAH	ENST00000366844	human	ensembl	74_37	-1	known	missense	c.165	p.D55E	1.000	pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	ENAH	HGNC	ENSG00000154380	tier1	-	-	52	0	0.00	35	4	10.26
CD300LB	0	genome.wustl.edu	37	17	72521968	72521968	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	72521968	72521968	C	A	SNP	CD300LB	ENST00000392621	human	ensembl	74_37	-1	known	missense	c.400	p.D134Y	0.000	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD300LB	HGNC	ENSG00000178789	tier1	-	-	71	0	0.00	36	7	16.28
NLRP4	0	genome.wustl.edu	37	19	56369983	56369983	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	56369983	56369983	G	A	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	nonsense	c.1224	p.W408*	0.998	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	tier1	-	-	68	0	0.00	53	8	13.11
WRB	0	genome.wustl.edu	37	21	40763742	40763742	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	21	40763742	40763742	G	T	SNP	WRB	ENST00000333781	human	ensembl	74_37	+1	known	missense	c.316	p.V106F	1.000	NULL	NULL	-	no_errors	WRB	HGNC	ENSG00000182093	tier1	-	-	31	0	0.00	30	7	18.92
PELI3	0	genome.wustl.edu	37	11	66243176	66243176	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	66243176	66243176	G	A	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	silent	c.948	p.K316	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516	tier1	-	-	12	0	0.00	12	4	25.00
SOS2	0	genome.wustl.edu	37	14	50623782	50623782	+	Silent	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	14	50623782	50623782	G	T	SNP	SOS2	ENST00000216373	human	ensembl	74_37	-1	known	silent	c.1992	p.G664	0.954	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS2	HGNC	ENSG00000100485	tier1	-	-	57	0	0.00	45	4	8.16
UPF2	0	genome.wustl.edu	37	10	11997274	11997274	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	11997274	11997274	C	T	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	missense	c.2807	p.G936D	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461	tier1	-	-	76	0	0.00	29	4	12.12
BTBD17	0	genome.wustl.edu	37	17	72357877	72357877	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	72357877	72357877	C	T	SNP	BTBD17	ENST00000375366	human	ensembl	74_37	-1	known	missense	c.82	p.A28T	0.993	NULL	pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD17	HGNC	ENSG00000204347	tier1	-	-	57	0	0.00	52	5	8.77
FRRS1	0	genome.wustl.edu	37	1	100176425	100176425	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	100176425	100176425	C	T	SNP	FRRS1	ENST00000287474	human	ensembl	74_37	-1	known	missense	c.1561	p.V521I	1.000	pfscan_Cyt_b561/ferric_Rdtase_TM	pfam_Reeler_dom,pfam_DOMON_domain,smart_DOMON_domain,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_DOMON_domain,pfscan_Reeler_dom,pfscan_Cyt_b561/ferric_Rdtase_TM	-	no_errors	FRRS1	HGNC	ENSG00000156869	tier1	-	-	71	0	0.00	122	17	12.23
DAB1	0	genome.wustl.edu	37	1	57535064	57535064	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	57535064	57535064	C	T	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.632	p.R211H	1.000	NULL	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	46	0	0.00	62	12	16.22
C1orf86	0	genome.wustl.edu	37	1	2118644	2118644	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	2118644	2118644	G	C	SNP	C1orf86	ENST00000414253	human	ensembl	74_37	-1	known	missense	c.541	p.L181V	1.000	NULL	NULL	-	no_errors	C1orf86	HGNC	ENSG00000162585	tier1	-	-	47	0	0.00	66	10	13.16
ZNF75D	0	genome.wustl.edu	37	X	134427799	134427799	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	134427799	134427799	C	-	DEL	ZNF75D	ENST00000370766	human	ensembl	74_37	-1	known	frame_shift_del	c.268	p.E90fs	0.728	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF75D	HGNC	ENSG00000186376	tier1			37	0	0.00	7	2	22.22
ZNF697	0	genome.wustl.edu	37	1	120165569	120165569	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	120165569	120165569	C	T	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	missense	c.1397	p.R466H	0.313	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067	tier1	-	-	32	0	0.00	16	17	51.52
RIMBP2	0	genome.wustl.edu	37	12	130927121	130927121	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	130927121	130927121	G	A	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.725	p.T242M	0.237	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	rs147881182	-	52	0	0.00	57	15	20.83
CCDC105	0	genome.wustl.edu	37	19	15132310	15132310	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	15132310	15132310	G	A	SNP	CCDC105	ENST00000292574	human	ensembl	74_37	+1	known	silent	c.1020	p.A340	0.945	pfam_Tektin	pfam_Tektin	-	no_errors	CCDC105	HGNC	ENSG00000160994	tier1	-	-	41	0	0.00	35	6	14.63
CPT1B	0	genome.wustl.edu	37	22	51007780	51007780	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	22	51007780	51007780	T	A	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	missense	c.2306	p.K769M	0.980	NULL	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	tier1	-	-	74	0	0.00	53	5	8.62
KIAA1841	0	genome.wustl.edu	37	2	61315638	61315639	+	RNA	INS	-	-	TA			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	2	61315638	61315639	-	TA	INS	KIAA1841	ENST00000482513	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	KIAA1841	HGNC	ENSG00000162929	tier1			22	0	0.00	19	3	13.64
SLC38A4	0	genome.wustl.edu	37	12	47172381	47172381	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	47172381	47172381	T	C	SNP	SLC38A4	ENST00000266579	human	ensembl	74_37	-1	known	missense	c.896	p.E299G	0.319	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A4	HGNC	ENSG00000139209	tier1	-	-	34	0	0.00	20	22	52.38
JAKMIP3	0	genome.wustl.edu	37	10	133930650	133930650	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	133930650	133930650	G	A	SNP	JAKMIP3	ENST00000298622	human	ensembl	74_37	+1	known	missense	c.205	p.A69T	0.811	NULL	NULL	-	no_errors	JAKMIP3	HGNC	ENSG00000188385	tier1	-	-	35	0	0.00	13	12	48.00
ZNF610	0	genome.wustl.edu	37	19	52869325	52869325	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	52869325	52869325	T	C	SNP	ZNF610	ENST00000321287	human	ensembl	74_37	+1	known	missense	c.694	p.Y232H	0.068	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF610	HGNC	ENSG00000167554	tier1	-	-	40	0	0.00	37	4	9.76
KLF5	0	genome.wustl.edu	37	13	73636861	73636861	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	13	73636861	73636861	G	-	DEL	KLF5	ENST00000377687	human	ensembl	74_37	+1	known	frame_shift_del	c.1124	p.C375fs	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF5	HGNC	ENSG00000102554	tier1			43	0	0.00	12	2	14.29
MYO5A	0	genome.wustl.edu	37	15	52688573	52688573	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	15	52688573	52688573	A	T	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.1341	p.N447K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535	tier1	-	-	67	0	0.00	52	5	8.77
CHD5	0	genome.wustl.edu	37	1	6214848	6214848	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	6214848	6214848	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.617	p.A206V	1.000	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	tier1	-	-	29	0	0.00	43	6	12.24
LMTK2	0	genome.wustl.edu	37	7	97770732	97770732	+	Silent	SNP	T	T	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	7	97770732	97770732	T	C	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	silent	c.255	p.D85	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715	tier1	-	-	25	0	0.00	33	4	10.81
C20orf194	0	genome.wustl.edu	37	20	3305587	3305587	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	20	3305587	3305587	C	T	SNP	C20orf194	ENST00000252032	human	ensembl	74_37	-1	known	missense	c.1217	p.G406E	0.004	NULL	NULL	-	no_errors	C20orf194	HGNC	ENSG00000088854	tier1	-	-	58	0	0.00	69	6	8.00
ASCC3	0	genome.wustl.edu	37	6	101253758	101253758	+	Splice_Site	SNP	T	T	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	6	101253758	101253758	T	A	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	splice_site	c.802-2	e4-2	0.999	-	-	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1	-	-	34	0	0.00	18	3	14.29
WRN	0	genome.wustl.edu	37	8	31014958	31014958	+	Silent	SNP	C	C	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	8	31014958	31014958	C	G	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	silent	c.3894	p.G1298	1.000	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	30	0	0.00	17	8	32.00
GPR182	0	genome.wustl.edu	37	12	57390107	57390107	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	57390107	57390107	G	A	SNP	GPR182	ENST00000300098	human	ensembl	74_37	+1	known	missense	c.1114	p.A372T	0.005	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_G10D_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	GPR182	HGNC	ENSG00000166856	tier1	-	-	38	0	0.00	21	11	34.38
CDH20	0	genome.wustl.edu	37	18	59166690	59166690	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	18	59166690	59166690	C	A	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	missense	c.518	p.T173N	0.994	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542	tier1	-	-	34	0	0.00	46	26	36.11
CRIPAK	0	genome.wustl.edu	37	4	1388738	1388738	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	4	1388738	1388738	G	A	SNP	CRIPAK	ENST00000324803	human	ensembl	74_37	+1	known	missense	c.439	p.A147T	0.000	smart_Post-SET_dom	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979	tier1	rs146777511	-	141	0	0.00	101	11	9.57
TECTA	0	genome.wustl.edu	37	11	121028808	121028808	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	121028808	121028808	G	A	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.4564	p.D1522N	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1	-	-	26	0	0.00	17	4	19.05
C2CD3	0	genome.wustl.edu	37	11	73814461	73814461	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	73814461	73814461	G	A	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	silent	c.2295	p.L765	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1	-	-	85	0	0.00	43	19	30.65
ACAN	0	genome.wustl.edu	37	15	89390479	89390479	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	15	89390479	89390479	G	A	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.1435	p.V479I	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	53	0	0.00	40	11	21.57
ZNF268	0	genome.wustl.edu	37	12	133779911	133779911	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	133779911	133779911	C	G	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	missense	c.1639	p.Q547E	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	tier1	-	-	30	0	0.00	49	12	19.67
ASB2	0	genome.wustl.edu	37	14	94430829	94430829	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	14	94430829	94430829	G	A	SNP	ASB2	ENST00000555019	human	ensembl	74_37	-1	novel	silent	c.57	p.Y19	1.000	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB2	HGNC	ENSG00000100628	tier1	-	-	42	0	0.00	41	4	8.89
KCNV2	0	genome.wustl.edu	37	9	2717764	2717764	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	9	2717764	2717764	C	T	SNP	KCNV2	ENST00000382082	human	ensembl	74_37	+1	known	missense	c.25	p.R9W	0.005	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNV2	HGNC	ENSG00000168263	tier1	-	-	51	0	0.00	41	30	42.25
RNF167	0	genome.wustl.edu	37	17	4844429	4844429	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	4844429	4844429	A	T	SNP	RNF167	ENST00000262482	human	ensembl	74_37	+1	known	missense	c.142	p.T48S	0.003	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF167	HGNC	ENSG00000108523	tier1	-	-	35	0	0.00	35	4	10.26
SFMBT2	0	genome.wustl.edu	37	10	7214483	7214483	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	7214483	7214483	C	T	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.2125	p.V709M	0.289	superfamily_ARM-type_fold	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879	tier1	-	-	70	0	0.00	37	8	17.78
SLIT2	0	genome.wustl.edu	37	4	20525452	20525452	+	Silent	SNP	T	T	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	4	20525452	20525452	T	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	silent	c.1200	p.L400	0.992	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	57	0	0.00	39	5	11.36
ENSG00000249149	0	genome.wustl.edu	37	5	72706300	72706300	+	RNA	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	5	72706300	72706300	C	T	SNP	ENSG00000249149	ENST00000505955	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-79P5.3	Clone_based_vega_gene	ENSG00000249149	tier1	-	-	20	0	0.00	4	11	73.33
SHROOM3	0	genome.wustl.edu	37	4	77662897	77662897	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	4	77662897	77662897	G	A	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.3571	p.G1191R	0.002	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	14	0	0.00	19	7	26.92
CAPN13	0	genome.wustl.edu	37	2	31000431	31000431	+	Splice_Site	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	2	31000431	31000431	A	T	SNP	CAPN13	ENST00000295055	human	ensembl	74_37	-1	known	splice_site	c.271+2	e2+2	1.000	-	-	-	no_errors	CAPN13	HGNC	ENSG00000162949	tier1	-	-	61	0	0.00	40	8	16.67
CEP89	0	genome.wustl.edu	37	19	33392250	33392250	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	33392250	33392250	A	G	SNP	CEP89	ENST00000305768	human	ensembl	74_37	-1	known	missense	c.1634	p.L545P	0.997	NULL	NULL	-	no_errors	CEP89	HGNC	ENSG00000121289	tier1	-	-	42	0	0.00	37	4	9.76
ZDHHC1	0	genome.wustl.edu	37	16	67428948	67428948	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	16	67428948	67428948	G	T	SNP	ZDHHC1	ENST00000348579	human	ensembl	74_37	-1	known	missense	c.1187	p.A396E	0.002	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC1	HGNC	ENSG00000159714	tier1	-	-	33	0	0.00	30	4	11.76
REPIN1	0	genome.wustl.edu	37	7	150069396	150069407	+	In_Frame_Del	DEL	CCGCCAGGGGCC	CCGCCAGGGGCC	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	CCGCCAGGGGCC	CCGCCAGGGGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	7	150069396	150069407	CCGCCAGGGGCC	-	DEL	REPIN1	ENST00000489432	human	ensembl	74_37	+1	known	in_frame_del	c.1237_1248	p.GAPP415in_frame_del	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REPIN1	HGNC	ENSG00000214022	tier1			NA	NA	NA	NA	NA	NA
FBN3	0	genome.wustl.edu	37	19	8131121	8131121	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	8131121	8131121	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	silent	c.8112	p.S2704	0.000	pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	76	0	0.00	47	7	12.96
INCENP	0	genome.wustl.edu	37	11	61897827	61897827	+	Silent	SNP	A	A	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	61897827	61897827	A	G	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	silent	c.828	p.P276	0.003	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503	tier1	-	-	62	0	0.00	44	24	35.29
AGAP2	0	genome.wustl.edu	37	12	58123509	58123509	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	58123509	58123509	G	A	SNP	AGAP2	ENST00000547588	human	ensembl	74_37	-1	known	missense	c.2470	p.P824S	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP2	HGNC	ENSG00000135439	tier1	-	-	47	0	0.00	48	7	12.73
CHD9	0	genome.wustl.edu	37	16	53321893	53321893	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	16	53321893	53321893	A	C	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.5214	p.K1738N	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	43	0	0.00	11	22	66.67
KRTAP4-11	0	genome.wustl.edu	37	17	39274274	39274274	+	Silent	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	39274274	39274274	A	T	SNP	KRTAP4-11	ENST00000391413	human	ensembl	74_37	-1	known	silent	c.294	p.T98	0.110	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-11	HGNC	ENSG00000212721	tier1	-	-	95	0	0.00	49	45	45.92
UNC5B	0	genome.wustl.edu	37	10	73044578	73044578	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	73044578	73044578	G	A	SNP	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	missense	c.406	p.A136T	0.987	smart_Ig_sub	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731	tier1	-	-	25	0	0.00	12	5	29.41
TSC2	0	genome.wustl.edu	37	16	2136285	2136285	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	16	2136285	2136285	A	T	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.4754	p.K1585M	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	-	-	48	0	0.00	43	4	8.51
PATZ1	0	genome.wustl.edu	37	22	31723052	31723052	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	22	31723052	31723052	C	T	SNP	PATZ1	ENST00000266269	human	ensembl	74_37	-1	known	missense	c.1889	p.R630Q	1.000	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105	tier1	-	-	50	0	0.00	43	5	10.42
LGI1	0	genome.wustl.edu	37	10	95537148	95537148	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	95537148	95537148	G	A	SNP	LGI1	ENST00000371418	human	ensembl	74_37	+1	known	silent	c.300	p.S100	0.995	smart_Leu-rich_rpt_typical-subtyp	pfam_EPTP,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI1	HGNC	ENSG00000108231	tier1	-	-	45	0	0.00	49	5	9.26
ROBO3	0	genome.wustl.edu	37	11	124750448	124750453	+	In_Frame_Del	DEL	CGGAGT	CGGAGT	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	CGGAGT	CGGAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	124750448	124750453	CGGAGT	-	DEL	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	in_frame_del	c.4093_4098	p.RS1367in_frame_del	1.000:1.000:0.988:0.987:1.000:0.999	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134	tier1			NA	NA	NA	NA	NA	NA
CAP1	0	genome.wustl.edu	37	1	40535300	40535300	+	RNA	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	40535300	40535300	G	A	SNP	CAP1	ENST00000461993	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CAP1	HGNC	ENSG00000131236	tier1	-	-	57	0	0.00	54	6	10.00
DPY19L2	0	genome.wustl.edu	37	12	63974526	63974526	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	63974526	63974526	G	A	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	missense	c.1816	p.R606C	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990	tier1	-	-	78	0	0.00	81	17	17.35
WRNIP1	0	genome.wustl.edu	37	6	2770457	2770457	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	6	2770457	2770457	G	T	SNP	WRNIP1	ENST00000380773	human	ensembl	74_37	+1	known	missense	c.1118	p.R373L	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_MgsA_C,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_DUF815,pfam_IstB_ATP-bd,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_Znf_Rad18_put,smart_AAA+_ATPase	-	no_errors	WRNIP1	HGNC	ENSG00000124535	tier1	-	-	57	0	0.00	25	4	13.79
KCNT2	0	genome.wustl.edu	37	1	196309693	196309693	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	196309693	196309693	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.1561	p.V521I	1.000	pfam_K_chnl_Ca-activ_BK_asu	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	rs200217178	-	33	0	0.00	19	7	26.92
ITGA3	0	genome.wustl.edu	37	17	48154746	48154746	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	48154746	48154746	G	-	DEL	ITGA3	ENST00000320031	human	ensembl	74_37	+1	known	frame_shift_del	c.2074	p.A693fs	0.455	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA3	HGNC	ENSG00000005884	tier1			49	0	0.00	26	3	10.34
DPH1	0	genome.wustl.edu	37	17	1933486	1933486	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	1933486	1933486	G	T	SNP	DPH1	ENST00000263083	human	ensembl	74_37	+1	known	missense	c.38	p.G13V	0.001	NULL	pfam_DPH1/DPH2,pirsf_DPH1_eu/DPH2_arc,tigrfam_DPH1/DPH2	-	no_errors	DPH1	HGNC	ENSG00000108963	tier1	-	-	32	0	0.00	35	4	10.26
C20orf26	0	genome.wustl.edu	37	20	20258030	20258030	+	Silent	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	20	20258030	20258030	C	T	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	silent	c.2724	p.D908	0.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	tier1	-	-	44	0	0.00	76	7	8.43
FN3K	0	genome.wustl.edu	37	17	80696429	80696429	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	80696429	80696429	G	A	SNP	FN3K	ENST00000300784	human	ensembl	74_37	+1	known	missense	c.206	p.R69Q	0.840	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	-	no_errors	FN3K	HGNC	ENSG00000167363	tier1	-	-	39	0	0.00	25	9	26.47
PPM1B	0	genome.wustl.edu	37	2	44429142	44429142	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	2	44429142	44429142	G	A	SNP	PPM1B	ENST00000282412	human	ensembl	74_37	+1	known	silent	c.804	p.L268	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,pfam_PP2C_C,superfamily_PP2C-like_dom,superfamily_PP2C_C,smart_PP2C-like_dom	-	no_errors	PPM1B	HGNC	ENSG00000138032	tier1	-	-	32	0	0.00	44	4	8.33
POPDC2	0	genome.wustl.edu	37	3	119367292	119367292	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	3	119367292	119367292	G	T	SNP	POPDC2	ENST00000341124	human	ensembl	74_37	-1	known	missense	c.824	p.A275D	0.714	NULL	pfam_Popeye_prot,superfamily_cNMP-bd-like	-	no_errors	POPDC2	HGNC	ENSG00000121577	tier1	-	-	28	0	0.00	31	4	11.43
RAI1	0	genome.wustl.edu	37	17	17697094	17697096	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	17697094	17697096	CAG	-	DEL	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	in_frame_del	c.832_834	p.Q281in_frame_del	0.831:0.157:0.050	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557	tier1			49	0	0.00	45	5	10.00
GEN1	0	genome.wustl.edu	37	2	17941359	17941359	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	2	17941359	17941359	A	T	SNP	GEN1	ENST00000317402	human	ensembl	74_37	+1	known	missense	c.149	p.K50M	1.000	pfam_XPG_DNA_repair_N,smart_XPG_DNA_repair_N	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	GEN1	HGNC	ENSG00000178295	tier1	-	-	79	0	0.00	39	4	9.30
KRTAP24-1	0	genome.wustl.edu	37	21	31654516	31654516	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	21	31654516	31654516	G	A	SNP	KRTAP24-1	ENST00000340345	human	ensembl	74_37	-1	known	silent	c.735	p.C245	0.979	NULL	pfam_KRTAP_PMG	-	no_errors	KRTAP24-1	HGNC	ENSG00000188694	tier1	-	-	37	0	0.00	41	4	8.89
MFSD6L	0	genome.wustl.edu	37	17	8701913	8701913	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	8701913	8701913	C	T	SNP	MFSD6L	ENST00000329805	human	ensembl	74_37	-1	known	missense	c.526	p.V176I	0.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156	tier1	-	-	56	0	0.00	63	9	12.50
PTPRU	0	genome.wustl.edu	37	1	29641954	29641954	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	29641954	29641954	G	A	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.3328	p.V1110I	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656	tier1	-	-	35	0	0.00	43	4	8.51
TP53	0	genome.wustl.edu	37	17	7577570	7577570	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	7577570	7577570	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.711	p.M237I	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	40	0	0.00	8	28	77.78
CDC42BPG	0	genome.wustl.edu	37	11	64594547	64594547	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	64594547	64594547	C	T	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.4364	p.R1455Q	0.586	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	tier1	-	-	25	0	0.00	26	5	16.13
ENSG00000264057	0	genome.wustl.edu	37	17	62927326	62927326	+	RNA	SNP	T	T	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	17	62927326	62927326	T	G	SNP	ENSG00000264057	ENST00000583052	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-583F2.1	Clone_based_vega_gene	ENSG00000264057	tier1	-	-	23	0	0.00	11	8	42.11
HOOK2	0	genome.wustl.edu	37	19	12874393	12874393	+	Silent	SNP	T	T	C			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	12874393	12874393	T	C	SNP	HOOK2	ENST00000397668	human	ensembl	74_37	-1	known	silent	c.1959	p.R653	0.020	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066	tier1	-	-	40	0	0.00	35	21	37.50
ARSE	0	genome.wustl.edu	37	X	2864082	2864082	+	Silent	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	2864082	2864082	G	A	SNP	ARSE	ENST00000545496	human	ensembl	74_37	-1	known	silent	c.1023	p.H341	0.789	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSE	HGNC	ENSG00000157399	tier1	-	-	76	0	0.00	47	13	21.67
HELZ2	0	genome.wustl.edu	37	20	62195106	62195106	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	20	62195106	62195106	G	A	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	missense	c.5069	p.A1690V	0.008	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	47	0	0.00	77	36	31.86
RBMX	0	genome.wustl.edu	37	X	135956028	135956028	+	RNA	DEL	G	G	-			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	135956028	135956028	G	-	DEL	RBMX	ENST00000496459	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RBMX	HGNC	ENSG00000147274	tier1			26	0	0.00	10	4	28.57
CATSPER2P1	0	genome.wustl.edu	37	15	44028967	44028967	+	RNA	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	15	44028967	44028967	G	T	SNP	CATSPER2P1	ENST00000381680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CATSPER2P1	HGNC	ENSG00000205771	tier1	-	-	33	0	0.00	28	4	12.50
NUGGC	0	genome.wustl.edu	37	8	27884481	27884481	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	8	27884481	27884481	G	A	SNP	NUGGC	ENST00000341513	human	ensembl	74_37	-1	known	missense	c.2243	p.A748V	0.979	NULL	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	NUGGC	HGNC	ENSG00000189233	tier1	-	-	42	0	0.00	42	4	8.70
SHANK1	0	genome.wustl.edu	37	19	51217492	51217492	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	51217492	51217492	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	missense	c.587	p.A196V	0.985	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	67	0	0.00	34	5	12.82
WDR45	0	genome.wustl.edu	37	X	48932827	48932827	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	X	48932827	48932827	C	T	SNP	WDR45	ENST00000322995	human	ensembl	74_37	-1	known	missense	c.974	p.R325H	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR45	HGNC	ENSG00000196998	tier1	-	-	33	0	0.00	52	8	13.33
COG2	0	genome.wustl.edu	37	1	230807385	230807385	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	230807385	230807385	A	G	SNP	COG2	ENST00000366669	human	ensembl	74_37	+1	known	missense	c.898	p.S300G	1.000	NULL	pfam_COG_complex_COG2_C,pfam_COG_su2_N	-	no_errors	COG2	HGNC	ENSG00000135775	tier1	-	-	68	0	0.00	30	11	26.83
YY1	0	genome.wustl.edu	37	14	100742831	100742831	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	14	100742831	100742831	G	T	SNP	YY1	ENST00000262238	human	ensembl	74_37	+1	known	missense	c.908	p.C303F	1.000	smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY1	HGNC	ENSG00000100811	tier1	-	-	35	0	0.00	38	4	9.52
SOX14	0	genome.wustl.edu	37	3	137484304	137484304	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	3	137484304	137484304	G	T	SNP	SOX14	ENST00000306087	human	ensembl	74_37	+1	known	missense	c.678	p.K226N	1.000	NULL	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX14	HGNC	ENSG00000168875	tier1	-	-	51	0	0.00	20	10	33.33
PELI3	0	genome.wustl.edu	37	11	66243493	66243493	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	11	66243493	66243493	G	A	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	missense	c.1265	p.C422Y	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516	tier1	-	-	12	0	0.00	10	7	41.18
USP18	0	genome.wustl.edu	37	22	18652696	18652696	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	22	18652696	18652696	G	A	SNP	USP18	ENST00000215794	human	ensembl	74_37	+1	known	missense	c.713	p.R238H	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP18	HGNC	ENSG00000184979	tier1	-	-	87	0	0.00	91	14	13.33
OGDHL	0	genome.wustl.edu	37	10	50953842	50953842	+	Splice_Site	SNP	A	A	G			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	10	50953842	50953842	A	G	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	splice_site	c.1476+2	e10+2	1.000	-	-	-	no_errors	OGDHL	HGNC	ENSG00000197444	tier1	-	-	30	0	0.00	25	4	13.79
ELAVL3	0	genome.wustl.edu	37	19	11565658	11565658	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	19	11565658	11565658	C	T	SNP	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	missense	c.787	p.A263T	1.000	tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1	-	-	43	0	0.00	35	8	18.60
KHDRBS2	0	genome.wustl.edu	37	6	62604721	62604721	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	6	62604721	62604721	A	T	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.629	p.I210N	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232	tier1	-	-	55	0	0.00	50	9	15.25
NRD1	0	genome.wustl.edu	37	1	52305981	52305981	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	1	52305981	52305981	C	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.547	p.D183N	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618	tier1	-	-	31	0	0.00	35	4	10.26
DNAJC13	0	genome.wustl.edu	37	3	132175605	132175605	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	3	132175605	132175605	G	T	SNP	DNAJC13	ENST00000260818	human	ensembl	74_37	+1	known	missense	c.1278	p.E426D	1.000	NULL	pfam_DnaJ_domain,superfamily_ARM-type_fold,superfamily_GYF,smart_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC13	HGNC	ENSG00000138246	tier1	-	-	29	0	0.00	21	3	12.50
DTX1	0	genome.wustl.edu	37	12	113496104	113496104	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A7EU-01A-22D-A36J-09	TCGA-DX-A7EU-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	3ace7f8c-f2d1-4d11-a831-3a6c4596b7cc	e53ef50a-f7fe-49d0-a177-771e1fad6e10	12	113496104	113496104	G	A	SNP	DTX1	ENST00000257600	human	ensembl	74_37	+1	known	missense	c.107	p.R36H	1.000	pfam_WWE-dom,smart_WWE-dom_subgr,pfscan_WWE-dom	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX1	HGNC	ENSG00000135144	tier1	-	-	49	0	0.00	97	9	8.49
