Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
C5orf15	0	genome.wustl.edu	37	5	133295199	133295199	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	5	133295199	133295199	G	C	SNP	C5orf15	ENST00000231512	human	ensembl	74_37	-1	known	missense	c.652	p.H218D	1.000	NULL	NULL	-	no_errors	C5orf15	HGNC	ENSG00000113583	tier1	-	-	116	0	0.00	37	17	31.48
TTK	0	genome.wustl.edu	37	6	80737669	80737669	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	6	80737669	80737669	C	T	SNP	TTK	ENST00000369798	human	ensembl	74_37	+1	known	missense	c.1462	p.P488S	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742	tier1	-	-	79	0	0.00	35	5	12.50
SYT8	0	genome.wustl.edu	37	11	1856592	1856592	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	1856592	1856592	G	T	SNP	SYT8	ENST00000381968	human	ensembl	74_37	+1	known	missense	c.203	p.C68F	0.513	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT8	HGNC	ENSG00000149043	tier1	-	-	81	0	0.00	21	4	16.00
HSPG2	0	genome.wustl.edu	37	1	22169884	22169885	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	22169884	22169885	AG	-	DEL	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	frame_shift_del	c.8664_8663	p.S2888fs	0.999:1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_V-set_subgr,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1			145	0	0.00	31	6	16.22
KMT2A	0	genome.wustl.edu	37	11	118343956	118343956	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	118343956	118343956	C	-	DEL	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	frame_shift_del	c.2082	p.P695fs	1.000	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1			66	0	0.00	16	2	11.11
AMY2B	0	genome.wustl.edu	37	1	104118398	104118399	+	RNA	INS	-	-	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	104118398	104118399	-	A	INS	AMY2B	ENST00000462971	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.005	-	-	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1			11	0	0.00	11	4	26.67
WASH6P	0	genome.wustl.edu	37	X	155253591	155253591	+	RNA	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	X	155253591	155253591	G	A	SNP	WASH6P	ENST00000461007	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	tier1	-	-	245	0	0.00	62	10	13.89
MS4A2	0	genome.wustl.edu	37	11	59860903	59860903	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	59860903	59860903	A	G	SNP	MS4A2	ENST00000278888	human	ensembl	74_37	+1	known	missense	c.409	p.S137G	0.231	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A2	HGNC	ENSG00000149534	tier1	-	-	106	0	0.00	20	12	37.50
OBFC1	0	genome.wustl.edu	37	10	105658736	105658736	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	10	105658736	105658736	C	A	SNP	OBFC1	ENST00000224950	human	ensembl	74_37	-1	known	missense	c.480	p.W160C	0.998	pfam_CST_STN1_C,superfamily_NA-bd_OB-fold,pirsf_CST_STN1	pfam_CST_STN1_C,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pirsf_CST_STN1	-	no_errors	OBFC1	HGNC	ENSG00000107960	tier1	-	-	79	0	0.00	18	3	14.29
DSCAML1	0	genome.wustl.edu	37	11	117308034	117308034	+	Silent	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	117308034	117308034	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	silent	c.4704	p.C1568	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	58	0	0.00	12	3	20.00
FBP1	0	genome.wustl.edu	37	9	97367745	97367746	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	97367745	97367746	-	T	INS	FBP1	ENST00000375326	human	ensembl	74_37	-1	known	frame_shift_ins	c.819_818	p.N273fs	0.000:0.201	pfam_FBPase_class-1/SBPase	pfam_FBPase_class-1/SBPase,pfam_Inositol_monophosphatase,prints_FBPtase,prints_SBPase	-	no_errors	FBP1	HGNC	ENSG00000165140	tier1			57	0	0.00	15	2	11.76
KIF5C	0	genome.wustl.edu	37	2	149879946	149879946	+	RNA	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	149879946	149879946	A	-	DEL	KIF5C	ENST00000464066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.847	-	-	-	no_errors	KIF5C	HGNC	ENSG00000168280	tier1			48	0	0.00	14	2	12.50
DSPP	0	genome.wustl.edu	37	4	88536614	88536614	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	4	88536614	88536614	A	G	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	missense	c.2800	p.N934D	0.354	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	tier1	-	-	120	1	0.83	55	6	9.84
SLC6A9	0	genome.wustl.edu	37	1	44466534	44466534	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	44466534	44466534	G	A	SNP	SLC6A9	ENST00000360584	human	ensembl	74_37	-1	known	missense	c.1660	p.R554W	0.995	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517	tier1	-	-	122	0	0.00	47	20	29.85
EMC7	0	genome.wustl.edu	37	15	34393991	34393993	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	34393991	34393993	AGC	-	DEL	EMC7	ENST00000256545	human	ensembl	74_37	-1	known	in_frame_del	c.50_48	p.L17in_frame_del	0.275:0.430:0.449	NULL	pfam_DUF2012,superfamily_Carb-bd-like_fold	-	no_errors	EMC7	HGNC	ENSG00000134153	tier1			39	0	0.00	14	3	17.65
COMP	0	genome.wustl.edu	37	19	18895027	18895027	+	Silent	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	19	18895027	18895027	C	T	SNP	COMP	ENST00000222271	human	ensembl	74_37	-1	known	silent	c.2061	p.Q687	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd_dom,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	tier1	-	-	106	0	0.00	38	4	9.52
IRX1	0	genome.wustl.edu	37	5	3599481	3599481	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	5	3599481	3599481	G	A	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	missense	c.419	p.S140N	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	108	0	0.00	50	5	9.09
CALB1	0	genome.wustl.edu	37	8	91094268	91094268	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	8	91094268	91094268	T	C	SNP	CALB1	ENST00000265431	human	ensembl	74_37	-1	known	missense	c.142	p.K48E	0.999	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALB1	HGNC	ENSG00000104327	tier1	-	-	76	0	0.00	11	5	31.25
EHMT1	0	genome.wustl.edu	37	9	140611422	140611422	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	140611422	140611422	G	T	SNP	EHMT1	ENST00000460843	human	ensembl	74_37	+1	known	missense	c.430	p.A144S	0.935	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090	tier1	-	-	120	1	0.82	57	5	8.06
KIAA1199	0	genome.wustl.edu	37	15	81234301	81234301	+	Silent	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	81234301	81234301	C	T	SNP	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	silent	c.3519	p.G1173	0.000	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	tier1	rs145572198	-	43	0	0.00	11	3	21.43
WDR26	0	genome.wustl.edu	37	1	224581559	224581559	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	224581559	224581559	G	T	SNP	WDR26	ENST00000414423	human	ensembl	74_37	-1	known	missense	c.1931	p.A644E	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR26	HGNC	ENSG00000162923	tier1	-	-	69	0	0.00	15	3	16.67
GANAB	0	genome.wustl.edu	37	11	62400998	62400998	+	RNA	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	62400998	62400998	G	T	SNP	GANAB	ENST00000534422	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GANAB	HGNC	ENSG00000089597	tier1	-	-	58	0	0.00	16	4	20.00
C4orf50	0	genome.wustl.edu	37	4	5961217	5961217	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	4	5961217	5961217	G	T	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.2138	p.P713Q	0.001	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215	tier1	-	-	118	0	0.00	35	4	10.26
HIST1H2BI	0	genome.wustl.edu	37	6	26273228	26273228	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	6	26273228	26273228	C	A	SNP	HIST1H2BI	ENST00000377733	human	ensembl	74_37	+1	known	missense	c.25	p.P9T	0.964	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BI	HGNC	ENSG00000168242	tier1	-	-	84	0	0.00	41	4	8.89
DNAH8	0	genome.wustl.edu	37	6	38831733	38831733	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	6	38831733	38831733	T	-	DEL	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	frame_shift_del	c.5744	p.Y1916fs	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1			86	0	0.00	14	2	12.50
FAM69B	0	genome.wustl.edu	37	9	139617549	139617551	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	139617549	139617551	CTG	-	DEL	FAM69B	ENST00000371692	human	ensembl	74_37	+1	known	in_frame_del	c.619_621	p.L210in_frame_del	1.000:1.000:0.947	pfam_FAM69_kinase_dom	pfam_FAM69_kinase_dom	-	no_errors	FAM69B	HGNC	ENSG00000165716	tier1			35	0	0.00	11	2	15.38
UTS2	0	genome.wustl.edu	37	1	7910965	7910965	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	7910965	7910965	G	T	SNP	UTS2	ENST00000054668	human	ensembl	74_37	-1	known	missense	c.166	p.R56S	0.000	NULL	pfam_Urotensin_II	-	no_errors	UTS2	HGNC	ENSG00000049247	tier1	-	-	74	0	0.00	27	3	10.00
SETMAR	0	genome.wustl.edu	37	3	4345737	4345737	+	RNA	DEL	T	T	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	3	4345737	4345737	T	-	DEL	SETMAR	ENST00000462115	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.061	-	-	-	no_errors	SETMAR	HGNC	ENSG00000170364	tier1			48	0	0.00	10	2	16.67
HPN	0	genome.wustl.edu	37	19	35551321	35551321	+	Silent	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	19	35551321	35551321	G	A	SNP	HPN	ENST00000262626	human	ensembl	74_37	+1	known	silent	c.525	p.P175	0.003	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Hepsin-SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HPN	HGNC	ENSG00000105707	tier1	rs35890010	-	93	0	0.00	23	14	37.84
SYT3	0	genome.wustl.edu	37	19	51140536	51140536	+	Silent	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	19	51140536	51140536	G	T	SNP	SYT3	ENST00000338916	human	ensembl	74_37	-1	known	silent	c.133	p.R45	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT3	HGNC	ENSG00000213023	tier1	-	-	128	0	0.00	20	6	23.08
C2orf61	0	genome.wustl.edu	37	2	47357396	47357397	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	47357396	47357397	GT	-	DEL	C2orf61	ENST00000445927	human	ensembl	74_37	-1	known	frame_shift_del	c.403_402	p.L135fs	0.001:0.001	NULL	NULL	-	no_errors	C2orf61	HGNC	ENSG00000239605	tier1			62	0	0.00	19	2	9.52
LOC101060385	0	genome.wustl.edu	37	2	895978	895979	+	RNA	INS	-	-	TGTACA			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	895978	895979	-	TGTACA	INS	LOC101060385	ENST00000445279	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020:0.017	-	-	-	no_errors	AC113607.2	Clone_based_vega_gene	ENSG00000228799	tier1			NA	NA	NA	NA	NA	NA
TP53	0	genome.wustl.edu	37	17	7578290	7578290	+	Splice_Site	SNP	C	C	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	17	7578290	7578290	C	G	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.560-1	e5-1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	84	0	0.00	11	22	66.67
SIK2	0	genome.wustl.edu	37	11	111591379	111591379	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	111591379	111591379	C	-	DEL	SIK2	ENST00000304987	human	ensembl	74_37	+1	known	frame_shift_del	c.1673	p.N559fs	1.000	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK2	HGNC	ENSG00000170145	tier1			93	0	0.00	18	2	10.00
UTP14A	0	genome.wustl.edu	37	X	129055621	129055622	+	RNA	INS	-	-	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	X	129055621	129055622	-	A	INS	UTP14A	ENST00000498179	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	UTP14A	HGNC	ENSG00000156697	tier1			38	0	0.00	15	3	16.67
TRPM6	0	genome.wustl.edu	37	9	77436669	77436669	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	77436669	77436669	T	A	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.926	p.D309V	0.883	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	tier1	-	-	110	0	0.00	44	6	12.00
PFKP	0	genome.wustl.edu	37	10	3146003	3146003	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	10	3146003	3146003	G	A	SNP	PFKP	ENST00000381125	human	ensembl	74_37	+1	known	missense	c.487	p.A163T	0.000	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKP	HGNC	ENSG00000067057	tier1	-	-	68	0	0.00	29	4	12.12
DUOX2	0	genome.wustl.edu	37	15	45400250	45400250	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	45400250	45400250	C	G	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.1569	p.R523S	0.011	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279	tier1	-	-	216	0	0.00	105	10	8.70
SETD1B	0	genome.wustl.edu	37	12	122257459	122257461	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	122257459	122257461	GAG	-	DEL	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	in_frame_del	c.3439_3441	p.E1150in_frame_del	0.698:0.600:0.192	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	tier1			111	0	0.00	19	2	9.52
AMY2B	0	genome.wustl.edu	37	1	104118399	104118399	+	RNA	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	104118399	104118399	A	-	DEL	AMY2B	ENST00000462971	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1			12	0	0.00	12	3	20.00
SCN2A	0	genome.wustl.edu	37	2	166246020	166246020	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	166246020	166246020	C	T	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.5704	p.R1902C	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	55	0	0.00	21	7	25.00
DUOX2	0	genome.wustl.edu	37	15	45394058	45394058	+	Silent	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	45394058	45394058	C	A	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	silent	c.2784	p.L928	1.000	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279	tier1	-	-	86	0	0.00	28	8	22.22
DDX17	0	genome.wustl.edu	37	22	38894492	38894492	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	22	38894492	38894492	G	A	SNP	DDX17	ENST00000396821	human	ensembl	74_37	-1	known	missense	c.625	p.R209W	0.998	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX17	HGNC	ENSG00000100201	tier1	-	-	80	0	0.00	13	4	23.53
TMEM108	0	genome.wustl.edu	37	3	133109090	133109090	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	3	133109090	133109090	G	A	SNP	TMEM108	ENST00000321871	human	ensembl	74_37	+1	known	missense	c.1517	p.S506N	1.000	NULL	NULL	-	no_errors	TMEM108	HGNC	ENSG00000144868	tier1	-	-	63	0	0.00	39	4	9.30
MPDZ	0	genome.wustl.edu	37	9	13205963	13205963	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	13205963	13205963	C	T	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.1426	p.V476I	0.000	superfamily_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	65	0	0.00	27	11	28.95
HSD17B12	0	genome.wustl.edu	37	11	43876788	43876788	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	43876788	43876788	A	T	SNP	HSD17B12	ENST00000278353	human	ensembl	74_37	+1	known	missense	c.929	p.K310M	1.000	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B12	HGNC	ENSG00000149084	tier1	-	-	37	0	0.00	22	3	12.00
LINC00470	0	genome.wustl.edu	37	18	1276028	1276028	+	RNA	SNP	T	T	C			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	18	1276028	1276028	T	C	SNP	LINC00470	ENST00000269201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	LINC00470	HGNC	ENSG00000132204	tier1	-	-	148	0	0.00	41	5	10.87
KRT82	0	genome.wustl.edu	37	12	52797693	52797693	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	52797693	52797693	C	A	SNP	KRT82	ENST00000257974	human	ensembl	74_37	-1	known	missense	c.412	p.V138F	1.000	pfam_IF	pfam_IF,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT82	HGNC	ENSG00000161850	tier1	-	-	43	0	0.00	12	3	20.00
NLRP1	0	genome.wustl.edu	37	17	5436697	5436697	+	Silent	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	17	5436697	5436697	C	T	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	silent	c.3060	p.A1020	0.001	NULL	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592	tier1	-	-	16	0	0.00	4	6	60.00
RIMBP2	0	genome.wustl.edu	37	12	130921759	130921759	+	Silent	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	130921759	130921759	G	A	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	silent	c.1683	p.G561	0.038	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	56	0	0.00	18	4	18.18
DNM1P34	0	genome.wustl.edu	37	15	75593138	75593138	+	RNA	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	75593138	75593138	A	-	DEL	DNM1P34	ENST00000567292	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P34	HGNC	ENSG00000260357	tier1			37	0	0.00	6	2	25.00
SPTB	0	genome.wustl.edu	37	14	65234023	65234023	+	Silent	SNP	A	A	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	14	65234023	65234023	A	T	SNP	SPTB	ENST00000389722	human	ensembl	74_37	-1	known	silent	c.6267	p.T2089	0.838	pirsf_Spectrin_bsu,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	tier1	-	-	81	0	0.00	26	4	13.33
NUP210L	0	genome.wustl.edu	37	1	153995735	153995735	+	Silent	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	153995735	153995735	G	T	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	silent	c.4161	p.P1387	0.991	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	92	0	0.00	41	4	8.89
NOL4	0	genome.wustl.edu	37	18	31537461	31537461	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	18	31537461	31537461	T	-	DEL	NOL4	ENST00000261592	human	ensembl	74_37	-1	known	frame_shift_del	c.1257	p.D420fs	1.000	NULL	NULL	-	no_errors	NOL4	HGNC	ENSG00000101746	tier1			61	0	0.00	14	2	12.50
KIAA1429	0	genome.wustl.edu	37	8	95556150	95556150	+	Silent	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	8	95556150	95556150	C	A	SNP	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	silent	c.84	p.V28	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944	tier1	-	-	94	0	0.00	36	6	14.29
DOCK7	0	genome.wustl.edu	37	1	63097073	63097073	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	63097073	63097073	T	C	SNP	DOCK7	ENST00000251157	human	ensembl	74_37	-1	known	missense	c.1120	p.K374E	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK7	HGNC	ENSG00000116641	tier1	-	-	48	0	0.00	23	7	23.33
B4GALNT1	0	genome.wustl.edu	37	12	58020582	58020582	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	58020582	58020582	G	T	SNP	B4GALNT1	ENST00000341156	human	ensembl	74_37	-1	known	missense	c.1547	p.A516D	1.000	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT1	HGNC	ENSG00000135454	tier1	-	-	83	0	0.00	31	4	11.43
MPPED2	0	genome.wustl.edu	37	11	30557692	30557692	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	30557692	30557692	T	-	DEL	MPPED2	ENST00000358117	human	ensembl	74_37	-1	known	frame_shift_del	c.159	p.K53fs	1.000	NULL	pfam_PEstase_dom	-	no_errors	MPPED2	HGNC	ENSG00000066382	tier1			106	0	0.00	14	2	12.50
LRRK2	0	genome.wustl.edu	37	12	40689357	40689357	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	40689357	40689357	A	-	DEL	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	frame_shift_del	c.3007	p.K1003fs	0.937	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1			48	0	0.00	13	2	13.33
ATP13A2	0	genome.wustl.edu	37	1	17322893	17322893	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	17322893	17322893	G	A	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	missense	c.1294	p.L432F	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363	tier1	-	-	215	0	0.00	63	23	26.74
ATXN7L2	0	genome.wustl.edu	37	1	110033610	110033610	+	Silent	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	110033610	110033610	C	T	SNP	ATXN7L2	ENST00000369870	human	ensembl	74_37	+1	known	silent	c.1425	p.S475	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L2	HGNC	ENSG00000162650	tier1	-	-	134	0	0.00	41	4	8.89
TOPAZ1	0	genome.wustl.edu	37	3	44285989	44285989	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	3	44285989	44285989	G	T	SNP	TOPAZ1	ENST00000309765	human	ensembl	74_37	+1	known	missense	c.1991	p.C664F	0.001	NULL	NULL	-	no_errors	TOPAZ1	HGNC	ENSG00000173769	tier1	-	-	34	0	0.00	37	4	9.76
NOP2	0	genome.wustl.edu	37	12	6671112	6671112	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	12	6671112	6671112	A	T	SNP	NOP2	ENST00000322166	human	ensembl	74_37	-1	known	missense	c.1004	p.L335Q	1.000	pfam_Fmu/NOL1/Nop2p,tigrfam_Nop2p	pfam_Fmu/NOL1/Nop2p,pfam_P120R,pfam_rRNA_MeTrfase_FtsJ_dom,prints_RCMT,prints_RCMT_NOP2,tigrfam_Nop2p	-	no_errors	NOP2	HGNC	ENSG00000111641	tier1	-	-	120	0	0.00	34	9	20.93
C7orf25	0	genome.wustl.edu	37	7	42949654	42949654	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	7	42949654	42949654	T	A	SNP	C7orf25	ENST00000431882	human	ensembl	74_37	-1	known	missense	c.1020	p.Q340H	0.755	pfam_DUF1308	pfam_DUF1308	-	no_errors	C7orf25	HGNC	ENSG00000136197	tier1	-	-	66	0	0.00	34	4	10.53
TRAPPC11	0	genome.wustl.edu	37	4	184603969	184603969	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	4	184603969	184603969	G	T	SNP	TRAPPC11	ENST00000334690	human	ensembl	74_37	+1	known	nonsense	c.1198	p.G400*	1.000	pfam_Foie-gras_1	pfam_Foie-gras_1,pfam_DUF1683_C	-	no_errors	TRAPPC11	HGNC	ENSG00000168538	tier1	-	-	70	0	0.00	31	4	11.43
MATN3	0	genome.wustl.edu	37	2	20196955	20196955	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	20196955	20196955	A	-	DEL	MATN3	ENST00000407540	human	ensembl	74_37	-1	known	frame_shift_del	c.1234	p.S412fs	0.255	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_VWF_A,pfam_Matrilin_coiled-coil_trimer,pfam_EGF-like_Ca-bd_dom,smart_VWF_A,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN3	HGNC	ENSG00000132031	tier1			37	0	0.00	12	2	14.29
PPARG	0	genome.wustl.edu	37	3	12458565	12458565	+	Silent	SNP	C	C	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	3	12458565	12458565	C	G	SNP	PPARG	ENST00000287820	human	ensembl	74_37	+1	known	silent	c.1182	p.P394	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_1Cnucl_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_PPARgamma_N,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_1Cnucl_rcpt_G,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARG	HGNC	ENSG00000132170	tier1	-	-	95	0	0.00	35	4	10.26
EXD3	0	genome.wustl.edu	37	9	140243836	140243836	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	9	140243836	140243836	G	-	DEL	EXD3	ENST00000340951	human	ensembl	74_37	-1	known	frame_shift_del	c.1642	p.Q548fs	0.993	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	pfam_Mut7-C_RNAse_dom,pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD3	HGNC	ENSG00000187609	tier1			59	0	0.00	21	2	8.70
CDC40	0	genome.wustl.edu	37	6	110522833	110522833	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	6	110522833	110522833	C	-	DEL	CDC40	ENST00000307731	human	ensembl	74_37	+1	known	frame_shift_del	c.349	p.P117fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CDC40	HGNC	ENSG00000168438	tier1			68	0	0.00	17	2	10.53
IRX4	0	genome.wustl.edu	37	5	1879802	1879802	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	5	1879802	1879802	C	T	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	missense	c.552	p.M184I	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430	tier1	-	-	135	0	0.00	78	21	21.21
NPAS2	0	genome.wustl.edu	37	2	101541705	101541705	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	101541705	101541705	G	T	SNP	NPAS2	ENST00000542504	human	ensembl	74_37	+1	known	missense	c.325	p.D109Y	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	NPAS2	HGNC	ENSG00000170485	tier1	-	-	116	0	0.00	33	4	10.81
ENSG00000216194	0	genome.wustl.edu	37	8	7315547	7315547	+	RNA	SNP	A	A	G			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	8	7315547	7315547	A	G	SNP	ENSG00000216194	ENST00000401375	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.007	-	-	-	no_errors	AC130360.1	Clone_based_ensembl_gene	ENSG00000216194	tier1	-	-	174	0	0.00	52	7	11.86
ATP11A	0	genome.wustl.edu	37	13	113473690	113473690	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	13	113473690	113473690	G	A	SNP	ATP11A	ENST00000375630	human	ensembl	74_37	+1	known	missense	c.643	p.E215K	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11A	HGNC	ENSG00000068650	tier1	-	-	95	0	0.00	33	10	23.26
ACHE	0	genome.wustl.edu	37	7	100491105	100491105	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	7	100491105	100491105	C	T	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	missense	c.749	p.R250Q	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085	tier1	-	-	44	0	0.00	12	4	25.00
MAPK8IP3	0	genome.wustl.edu	37	16	1812437	1812437	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	16	1812437	1812437	G	A	SNP	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	missense	c.1622	p.R541Q	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	tier1	-	-	146	0	0.00	78	7	8.24
OR5M1	0	genome.wustl.edu	37	11	56380055	56380055	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	11	56380055	56380055	T	-	DEL	OR5M1	ENST00000526538	human	ensembl	74_37	-1	known	frame_shift_del	c.924	p.K308fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M1	HGNC	ENSG00000255012	tier1			92	0	0.00	33	3	8.33
ABCA12	0	genome.wustl.edu	37	2	215852473	215852473	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	2	215852473	215852473	A	-	DEL	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	frame_shift_del	c.3874	p.S1292fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1			55	0	0.00	10	2	16.67
MAP3K6	0	genome.wustl.edu	37	1	27691161	27691161	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	27691161	27691161	C	A	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.495	p.Q165H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733	tier1	-	-	62	0	0.00	29	4	12.12
SEMA4B	0	genome.wustl.edu	37	15	90744945	90744945	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	15	90744945	90744945	C	-	DEL	SEMA4B	ENST00000332496	human	ensembl	74_37	+1	known	frame_shift_del	c.135	p.R47fs	0.781	superfamily_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4B	HGNC	ENSG00000185033	tier1			17	0	0.00	11	2	15.38
MLLT1	0	genome.wustl.edu	37	19	6222272	6222274	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	19	6222272	6222274	AGG	-	DEL	MLLT1	ENST00000252674	human	ensembl	74_37	-1	known	in_frame_del	c.970_968	p.S323in_frame_del	0.643:0.503:0.456	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT1	HGNC	ENSG00000130382	tier1			106	0	0.00	13	2	13.33
C18orf61	0	genome.wustl.edu	37	18	12211904	12211904	+	RNA	SNP	C	C	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	18	12211904	12211904	C	T	SNP	C18orf61	ENST00000586642	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-64C12.3	Clone_based_vega_gene	ENSG00000267733	tier1	-	-	103	0	0.00	34	8	19.05
ZZZ3	0	genome.wustl.edu	37	1	78031789	78031789	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	1	78031789	78031789	A	T	SNP	ZZZ3	ENST00000370801	human	ensembl	74_37	-1	known	missense	c.2544	p.D848E	1.000	pfam_Znf_ZZ,pfscan_Znf_ZZ	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	ZZZ3	HGNC	ENSG00000036549	tier1	-	-	87	0	0.00	62	29	31.87
TBC1D1	0	genome.wustl.edu	37	4	38104690	38104691	+	Frame_Shift_Ins	INS	-	-	C			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	4	38104690	38104691	-	C	INS	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	frame_shift_ins	c.2469_2470	p.S824fs	0.998:0.997	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882	tier1			69	0	0.00	18	2	10.00
WDR52	0	genome.wustl.edu	37	3	113098247	113098249	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	3	113098247	113098249	TCC	-	DEL	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	in_frame_del	c.2204_2202	p.E737in_frame_del	1.000:1.000:1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	tier1			67	0	0.00	36	4	10.00
LCP2	0	genome.wustl.edu	37	5	169720342	169720342	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BK-01A-11D-A37C-09	TCGA-DX-A8BK-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	cb69acbd-68de-47c8-9f21-643be150e2e8	ad86364a-9f45-4c31-a547-3de1dc9c8120	5	169720342	169720342	T	A	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	missense	c.113	p.K38M	0.911	pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462	tier1	-	-	109	0	0.00	22	10	31.25
