Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACTL9	0	genome.wustl.edu	37	19	8807881	8807881	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	19	8807881	8807881	G	A	SNP	ACTL9	ENST00000324436	human	ensembl	74_37	-1	known	missense	c.1171	p.R391C	0.994	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL9	HGNC	ENSG00000181786	tier1	-	-	52	0	0.00	35	19	35.19
TNXB	0	genome.wustl.edu	37	6	32023775	32023775	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	6	32023775	32023775	C	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.8320	p.D2774N	0.925	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	55	0	0.00	42	67	61.47
THAP6	0	genome.wustl.edu	37	4	76442147	76442147	+	Silent	SNP	T	T	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	4	76442147	76442147	T	C	SNP	THAP6	ENST00000311638	human	ensembl	74_37	+1	known	silent	c.246	p.P82	1.000	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP6	HGNC	ENSG00000174796	tier1	-	-	64	0	0.00	19	3	13.64
ZNF430	0	genome.wustl.edu	37	19	21216935	21216935	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	19	21216935	21216935	G	C	SNP	ZNF430	ENST00000261560	human	ensembl	74_37	+1	known	missense	c.267	p.E89D	0.225	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF430	HGNC	ENSG00000118620	tier1	-	-	70	0	0.00	31	23	42.59
HECTD1	0	genome.wustl.edu	37	14	31642438	31642438	+	Silent	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	14	31642438	31642438	C	T	SNP	HECTD1	ENST00000399332	human	ensembl	74_37	-1	known	silent	c.1080	p.E360	0.977	superfamily_ARM-type_fold	pfam_HECT,pfam_Sad1_UNC_C,pfam_Mib_Herc2,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,superfamily_Galactose-bd-like,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT	-	no_errors	HECTD1	HGNC	ENSG00000092148	tier1	-	-	44	0	0.00	14	3	17.65
AOX2P	0	genome.wustl.edu	37	2	201619758	201619759	+	RNA	DEL	TG	TG	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	2	201619758	201619759	TG	-	DEL	AOX2P	ENST00000472376	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AOX2P	HGNC	ENSG00000243478	tier1			11	0	0.00	11	5	31.25
CTPS2	0	genome.wustl.edu	37	X	16609019	16609020	+	RNA	INS	-	-	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	16609019	16609020	-	A	INS	CTPS2	ENST00000483053	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTPS2	HGNC	ENSG00000047230	tier1			25	0	0.00	22	3	12.00
TTLL11	0	genome.wustl.edu	37	9	124855330	124855331	+	In_Frame_Ins	INS	-	-	TGGCCT			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	9	124855330	124855331	-	TGGCCT	INS	TTLL11	ENST00000321582	human	ensembl	74_37	-1	known	in_frame_ins	c.368_367	p.123in_frame_insKA	0.000:0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL11	HGNC	ENSG00000175764	tier1			NA	NA	NA	NA	NA	NA
KDELC2	0	genome.wustl.edu	37	11	108352023	108352023	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	108352023	108352023	G	T	SNP	KDELC2	ENST00000323468	human	ensembl	74_37	-1	known	missense	c.982	p.L328M	0.110	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC2	HGNC	ENSG00000178202	tier1	-	-	52	0	0.00	37	4	9.76
CRISPLD1	0	genome.wustl.edu	37	8	75941636	75941636	+	Silent	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	8	75941636	75941636	C	T	SNP	CRISPLD1	ENST00000262207	human	ensembl	74_37	+1	known	silent	c.1335	p.C445	1.000	pfam_LCCL,superfamily_LCCL,smart_LCCL,pfscan_LCCL	pfam_LCCL,pfam_CAP_domain,superfamily_CAP_domain,superfamily_LCCL,smart_Allrgn_V5/Tpx1,smart_LCCL,pfscan_LCCL,prints_Allrgn_V5/Tpx1	-	no_errors	CRISPLD1	HGNC	ENSG00000121005	tier1	-	-	44	0	0.00	31	4	11.43
IL13RA1	0	genome.wustl.edu	37	X	117883649	117883649	+	Silent	SNP	T	T	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	117883649	117883649	T	G	SNP	IL13RA1	ENST00000371666	human	ensembl	74_37	+1	known	silent	c.396	p.L132	0.048	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	IL13RA1	HGNC	ENSG00000131724	tier1	-	-	45	0	0.00	26	4	13.33
EBF3	0	genome.wustl.edu	37	10	131760436	131760436	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	10	131760436	131760436	T	C	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	missense	c.410	p.Q137R	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001	tier1	-	-	41	0	0.00	45	4	8.16
C1orf27	0	genome.wustl.edu	37	1	186367574	186367574	+	Splice_Site	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	186367574	186367574	G	A	SNP	C1orf27	ENST00000287859	human	ensembl	74_37	+1	known	splice_site	c.909+1	e9+1	1.000	-	-	-	no_errors	C1orf27	HGNC	ENSG00000157181	tier1	-	-	55	0	0.00	34	4	10.53
C4orf22	0	genome.wustl.edu	37	4	81504291	81504291	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	4	81504291	81504291	C	T	SNP	C4orf22	ENST00000508675	human	ensembl	74_37	+1	known	missense	c.287	p.T96M	1.000	NULL	NULL	-	no_errors	C4orf22	HGNC	ENSG00000197826	tier1	rs142731425	GMAF=0.0005	44	0	0.00	6	11	61.11
HSPG2	0	genome.wustl.edu	37	1	22149775	22149775	+	RNA	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	22149775	22149775	G	A	SNP	HSPG2	ENST00000486901	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	26	0	0.00	38	5	11.63
RNFT2	0	genome.wustl.edu	37	12	117290182	117290183	+	RNA	INS	-	-	TTCCCC			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	12	117290182	117290183	-	TTCCCC	INS	RNFT2	ENST00000551251	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.009	-	-	-	no_errors	RNFT2	HGNC	ENSG00000135119	tier1			NA	NA	NA	NA	NA	NA
CCDC22	0	genome.wustl.edu	37	X	49106184	49106184	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	49106184	49106184	C	A	SNP	CCDC22	ENST00000376227	human	ensembl	74_37	+1	known	missense	c.1768	p.Q590K	1.000	pfam_DUF812	pfam_DUF812	-	no_errors	CCDC22	HGNC	ENSG00000101997	tier1	-	-	81	0	0.00	49	31	38.75
ORC5	0	genome.wustl.edu	37	7	103805705	103805705	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	103805705	103805705	T	C	SNP	ORC5	ENST00000297431	human	ensembl	74_37	-1	known	missense	c.1016	p.N339S	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	ORC5	HGNC	ENSG00000164815	tier1	-	-	56	0	0.00	31	4	11.43
TCP11	0	genome.wustl.edu	37	6	35109033	35109040	+	RNA	DEL	GCGGCCTG	GCGGCCTG	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	GCGGCCTG	GCGGCCTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	6	35109033	35109040	GCGGCCTG	-	DEL	TCP11	ENST00000394696	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000:0.000:0.001:0.002:0.001:0.000:0.000	-	-	-	no_errors	TCP11	HGNC	ENSG00000124678	tier1			NA	NA	NA	NA	NA	NA
LSAMP	0	genome.wustl.edu	37	3	116163774	116163774	+	Silent	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	3	116163774	116163774	G	A	SNP	LSAMP	ENST00000490035	human	ensembl	74_37	-1	known	silent	c.105	p.N35	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LSAMP	HGNC	ENSG00000185565	tier1	-	-	39	0	0.00	44	4	8.33
ANGEL2	0	genome.wustl.edu	37	1	213168525	213168525	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	213168525	213168525	A	G	SNP	ANGEL2	ENST00000366962	human	ensembl	74_37	-1	known	missense	c.1493	p.V498A	0.015	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	ANGEL2	HGNC	ENSG00000174606	tier1	-	-	29	0	0.00	29	12	29.27
ANKS4B	0	genome.wustl.edu	37	16	21261992	21261992	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	16	21261992	21261992	A	G	SNP	ANKS4B	ENST00000311620	human	ensembl	74_37	+1	known	missense	c.1105	p.I369V	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKS4B	HGNC	ENSG00000175311	tier1	-	-	26	0	0.00	17	4	19.05
FXR2	0	genome.wustl.edu	37	17	7496167	7496167	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	17	7496167	7496167	G	A	SNP	FXR2	ENST00000250113	human	ensembl	74_37	-1	known	missense	c.1574	p.S525F	0.997	pfam_Frag_X_MRP_fam	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR2	HGNC	ENSG00000129245	tier1	-	-	22	0	0.00	10	32	76.19
PARL	0	genome.wustl.edu	37	3	183551567	183551567	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	3	183551567	183551567	G	A	SNP	PARL	ENST00000317096	human	ensembl	74_37	-1	known	missense	c.875	p.P292L	1.000	pfam_Peptidase_S54_rhomboid_dom	pfam_Peptidase_S54_rhomboid_dom	-	no_errors	PARL	HGNC	ENSG00000175193	tier1	-	-	30	0	0.00	12	5	29.41
ABCB10	0	genome.wustl.edu	37	1	229667402	229667402	+	Silent	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	229667402	229667402	C	T	SNP	ABCB10	ENST00000344517	human	ensembl	74_37	-1	known	silent	c.1416	p.E472	0.996	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB10	HGNC	ENSG00000135776	tier1	-	-	55	0	0.00	35	23	39.66
TRPV6	0	genome.wustl.edu	37	7	142571440	142571440	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	142571440	142571440	G	T	SNP	TRPV6	ENST00000359396	human	ensembl	74_37	-1	known	missense	c.1549	p.P517T	1.000	pfam_Ion_trans_dom,tigrfam_TRP_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV5/TRPV6,prints_TRPV6_channel,prints_Ankyrin_rpt,tigrfam_TRP_channel	-	no_errors	TRPV6	HGNC	ENSG00000165125	tier1	-	-	26	0	0.00	15	14	48.28
MYO1E	0	genome.wustl.edu	37	15	59470648	59470648	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	15	59470648	59470648	C	A	SNP	MYO1E	ENST00000288235	human	ensembl	74_37	-1	known	missense	c.1993	p.D665Y	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1E	HGNC	ENSG00000157483	tier1	-	-	53	0	0.00	44	18	29.03
TBC1D10B	0	genome.wustl.edu	37	16	30381257	30381268	+	In_Frame_Del	DEL	GCCGGGGCTGGG	GCCGGGGCTGGG	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	GCCGGGGCTGGG	GCCGGGGCTGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	16	30381257	30381268	GCCGGGGCTGGG	-	DEL	TBC1D10B	ENST00000409939	human	ensembl	74_37	-1	known	in_frame_del	c.248_237	p.PAPA80in_frame_del	0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.001	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D10B	HGNC	ENSG00000169221	tier1			NA	NA	NA	NA	NA	NA
CASZ1	0	genome.wustl.edu	37	1	10720564	10720564	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	10720564	10720564	C	T	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.535	p.A179T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	28	0	0.00	30	4	11.76
LIME1	0	genome.wustl.edu	37	20	62369426	62369427	+	RNA	INS	-	-	GGGGCG			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	20	62369426	62369427	-	GGGGCG	INS	LIME1	ENST00000465591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	LIME1	HGNC	ENSG00000203896	tier1			NA	NA	NA	NA	NA	NA
HSF4	0	genome.wustl.edu	37	16	67202771	67202771	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	16	67202771	67202771	G	T	SNP	HSF4	ENST00000264009	human	ensembl	74_37	+1	known	nonsense	c.1120	p.E374*	0.998	NULL	pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF4	HGNC	ENSG00000102878	tier1	-	-	48	0	0.00	37	4	9.76
LY75	0	genome.wustl.edu	37	2	160698813	160698813	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	2	160698813	160698813	A	G	SNP	LY75	ENST00000554112	human	ensembl	74_37	-1	known	missense	c.3223	p.W1075R	0.987	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219	tier1	-	-	66	0	0.00	43	4	8.51
ENSG00000252677	0	genome.wustl.edu	37	18	19292022	19292022	+	RNA	SNP	A	A	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	18	19292022	19292022	A	C	SNP	ENSG00000252677	ENST00000516868	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.991	-	-	-	no_errors	SNORA81	RFAM	ENSG00000252677	tier1	-	-	32	0	0.00	16	9	36.00
PYGM	0	genome.wustl.edu	37	11	64518806	64518806	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	64518806	64518806	C	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.1960	p.A654T	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976	tier1	-	-	23	0	0.00	12	10	45.45
MLC1	0	genome.wustl.edu	37	22	50502469	50502470	+	In_Frame_Ins	INS	-	-	GCACCCCCACCCCACAGGCCACTCACCTCCCCG			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	22	50502469	50502470	-	GCACCCCCACCCCACAGGCCACTCACCTCCCCG	INS	MLC1	ENST00000311597	human	ensembl	74_37	-1	known	in_frame_ins	c.1053_1052	p.355in_frame_insSGLWGGGAGEV	0.000:0.000	NULL	NULL	-	no_errors	MLC1	HGNC	ENSG00000100427	tier1			NA	NA	NA	NA	NA	NA
TXNDC16	0	genome.wustl.edu	37	14	52957587	52957587	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	14	52957587	52957587	A	-	DEL	TXNDC16	ENST00000281741	human	ensembl	74_37	-1	known	frame_shift_del	c.893	p.L298fs	1.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC16	HGNC	ENSG00000087301	tier1			49	0	0.00	18	2	10.00
NRP2	0	genome.wustl.edu	37	2	206588537	206588537	+	Silent	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	2	206588537	206588537	G	T	SNP	NRP2	ENST00000360409	human	ensembl	74_37	+1	known	silent	c.693	p.G231	0.962	pirsf_Neuropilin,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_MAM_dom,pfam_Neuropilin1_C,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257	tier1	-	-	60	0	0.00	25	11	30.56
KIAA1217	0	genome.wustl.edu	37	10	24813596	24813596	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	10	24813596	24813596	A	G	SNP	KIAA1217	ENST00000376454	human	ensembl	74_37	+1	known	missense	c.2801	p.Q934R	0.976	NULL	pfam_AIP3_C	-	no_errors	KIAA1217	HGNC	ENSG00000120549	tier1	-	-	34	0	0.00	29	4	12.12
IL2RG	0	genome.wustl.edu	37	X	70328508	70328508	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	70328508	70328508	G	C	SNP	IL2RG	ENST00000374202	human	ensembl	74_37	-1	known	missense	c.795	p.I265M	0.918	NULL	pfam_IL-6_rcpt_alpha-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RG	HGNC	ENSG00000147168	tier1	-	-	20	0	0.00	17	9	34.62
P2RX2	0	genome.wustl.edu	37	12	133197922	133197922	+	Silent	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	12	133197922	133197922	G	A	SNP	P2RX2	ENST00000343948	human	ensembl	74_37	+1	known	silent	c.987	p.V329	1.000	pfam_P2X_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X2_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX2	HGNC	ENSG00000187848	tier1	-	-	30	0	0.00	18	5	21.74
PAPOLB	0	genome.wustl.edu	37	7	4901098	4901098	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	4901098	4901098	A	G	SNP	PAPOLB	ENST00000404991	human	ensembl	74_37	-1	known	missense	c.341	p.I114T	1.000	pfam_PolA_pol_cen_dom,pfam_Nucleotidyltransferase,pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLB	HGNC	ENSG00000218823	tier1	-	-	35	0	0.00	10	5	33.33
MOK	0	genome.wustl.edu	37	14	102698898	102698898	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	14	102698898	102698898	C	T	SNP	MOK	ENST00000559138	human	ensembl	74_37	-1	known	missense	c.38	p.C13Y	1.000	NULL	NULL	-	no_errors	MOK	HGNC	ENSG00000080823	tier1	-	-	72	0	0.00	45	4	8.16
DNM1P34	0	genome.wustl.edu	37	15	75592881	75592908	+	RNA	DEL	CGGGCTTCCCTCTTCTCTGGTCACCCTC	CGGGCTTCCCTCTTCTCTGGTCACCCTC	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	CGGGCTTCCCTCTTCTCTGGTCACCCTC	CGGGCTTCCCTCTTCTCTGGTCACCCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	15	75592881	75592908	CGGGCTTCCCTCTTCTCTGGTCACCCTC	-	DEL	DNM1P34	ENST00000567292	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001:0.002:0.003:0.016:0.019:0.542:0.707:0.754:0.765:0.759:0.735:0.645:0.577:0.391:0.379:0.371:0.364:0.334:0.225:0.038:0.019:0.014:0.015:0.015:0.021:0.029:0.030	-	-	-	no_errors	DNM1P34	HGNC	ENSG00000260357	tier1			NA	NA	NA	NA	NA	NA
NINL	0	genome.wustl.edu	37	20	25443278	25443279	+	RNA	INS	-	-	TTTGTTTTGT			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	20	25443278	25443279	-	TTTGTTTTGT	INS	NINL	ENST00000496509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010:0.013	-	-	-	no_errors	NINL	HGNC	ENSG00000101004	tier1			NA	NA	NA	NA	NA	NA
TRMT61B	0	genome.wustl.edu	37	2	29092575	29092575	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	2	29092575	29092575	C	T	SNP	TRMT61B	ENST00000306108	human	ensembl	74_37	-1	known	missense	c.569	p.G190D	0.506	pfam_tRNA_MeTrfase_GCD14	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	-	no_errors	TRMT61B	HGNC	ENSG00000171103	tier1	-	-	42	0	0.00	24	4	14.29
ATRX	0	genome.wustl.edu	37	X	76939577	76939577	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	76939577	76939577	G	A	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	nonsense	c.1171	p.Q391*	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	51	0	0.00	16	12	42.86
SNRNP40	0	genome.wustl.edu	37	1	31744332	31744332	+	Silent	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	31744332	31744332	G	T	SNP	SNRNP40	ENST00000446633	human	ensembl	74_37	-1	known	silent	c.669	p.R223	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SNRNP40	HGNC	ENSG00000060688	tier1	-	-	18	0	0.00	17	4	19.05
VIP	0	genome.wustl.edu	37	6	153077274	153077274	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	6	153077274	153077274	A	T	SNP	VIP	ENST00000367244	human	ensembl	74_37	+1	known	missense	c.341	p.N114I	0.000	NULL	pfam_Glucagon_GIP_secretin_VIP,smart_Glucagon_GIP_secretin_VIP	-	no_errors	VIP	HGNC	ENSG00000146469	tier1	-	-	42	0	0.00	19	4	17.39
FAM120C	0	genome.wustl.edu	37	X	54209302	54209303	+	In_Frame_Ins	INS	-	-	GGCGGC			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	54209302	54209303	-	GGCGGC	INS	FAM120C	ENST00000375180	human	ensembl	74_37	-1	known	in_frame_ins	c.330_329	p.112in_frame_insPP	0.999:0.998	NULL	NULL	-	no_errors	FAM120C	HGNC	ENSG00000184083	tier1			NA	NA	NA	NA	NA	NA
INTS5	0	genome.wustl.edu	37	11	62415487	62415487	+	Silent	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	62415487	62415487	G	A	SNP	INTS5	ENST00000330574	human	ensembl	74_37	-1	known	silent	c.2065	p.L689	0.999	NULL	NULL	-	no_errors	INTS5	HGNC	ENSG00000185085	tier1	-	-	40	0	0.00	26	8	23.53
XKR4	0	genome.wustl.edu	37	8	56436473	56436473	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	8	56436473	56436473	G	A	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.1640	p.R547Q	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579	tier1	-	-	44	0	0.00	25	9	26.47
TIMM50	0	genome.wustl.edu	37	19	39971423	39971423	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	19	39971423	39971423	T	A	SNP	TIMM50	ENST00000314349	human	ensembl	74_37	+1	known	missense	c.239	p.I80N	0.995	NULL	pfam_NIF,superfamily_HAD-like_dom,smart_NIF,pfscan_NIF	-	no_errors	TIMM50	HGNC	ENSG00000105197	tier1	-	-	77	0	0.00	227	30	11.67
PEX5L	0	genome.wustl.edu	37	3	179525571	179525571	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	3	179525571	179525571	G	A	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	missense	c.1567	p.R523C	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757	tier1	-	-	27	0	0.00	29	7	19.44
GOLGA8N	0	genome.wustl.edu	37	15	32890118	32890118	+	Silent	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	15	32890118	32890118	A	G	SNP	GOLGA8N	ENST00000448387	human	ensembl	74_37	+1	known	silent	c.426	p.K142	0.187	NULL	NULL	-	no_errors	GOLGA8N	HGNC	ENSG00000232653	tier1	-	-	52	0	0.00	65	29	30.85
SNORA77	0	genome.wustl.edu	37	1	203698739	203698739	+	RNA	SNP	C	C	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	203698739	203698739	C	G	SNP	SNORA77	ENST00000408716	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.556	-	-	-	no_errors	SNORA77	HGNC	ENSG00000221643	tier1	-	-	32	0	0.00	35	4	10.26
PPP2R3A	0	genome.wustl.edu	37	3	135806749	135806749	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	3	135806749	135806749	G	T	SNP	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	missense	c.2813	p.R938M	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711	tier1	-	-	46	0	0.00	21	17	44.74
CHD8	0	genome.wustl.edu	37	14	21899129	21899129	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	14	21899129	21899129	G	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.674	p.A225V	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1	-	-	50	0	0.00	15	4	21.05
CACNG8	0	genome.wustl.edu	37	19	54481448	54481448	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	19	54481448	54481448	C	T	SNP	CACNG8	ENST00000270458	human	ensembl	74_37	+1	known	missense	c.332	p.T111M	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g8su,prints_Claudin	-	no_errors	CACNG8	HGNC	ENSG00000142408	tier1	-	-	73	0	0.00	40	5	11.11
SYCP3	0	genome.wustl.edu	37	12	102131694	102131694	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	12	102131694	102131694	T	C	SNP	SYCP3	ENST00000266743	human	ensembl	74_37	-1	known	missense	c.20	p.K7R	0.921	NULL	pfam_Cor1/Xlr/Xmr	-	no_errors	SYCP3	HGNC	ENSG00000139351	tier1	-	-	51	0	0.00	26	3	10.00
ENPP1	0	genome.wustl.edu	37	6	132196961	132196961	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	6	132196961	132196961	G	T	SNP	ENPP1	ENST00000360971	human	ensembl	74_37	+1	known	missense	c.1681	p.A561S	1.000	superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENPP1	HGNC	ENSG00000197594	tier1	-	-	46	0	0.00	43	4	8.51
SEPT8	0	genome.wustl.edu	37	5	132097299	132097299	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	5	132097299	132097299	G	T	SNP	SEPT8	ENST00000378719	human	ensembl	74_37	-1	known	nonsense	c.813	p.C271*	0.928	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT8	HGNC	ENSG00000164402	tier1	-	-	37	0	0.00	32	4	11.11
SHANK2	0	genome.wustl.edu	37	11	70332776	70332776	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	70332776	70332776	G	A	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.3625	p.R1209W	0.907	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	tier1	-	-	84	0	0.00	44	10	18.52
C2orf74	0	genome.wustl.edu	37	2	61391639	61391639	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	2	61391639	61391639	C	T	SNP	C2orf74	ENST00000432605	human	ensembl	74_37	+1	known	nonsense	c.562	p.R188*	0.001	NULL	NULL	-	no_errors	C2orf74	HGNC	ENSG00000237651	tier1	-	-	39	0	0.00	21	7	25.00
FANCB	0	genome.wustl.edu	37	X	14862776	14862776	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	X	14862776	14862776	T	A	SNP	FANCB	ENST00000324138	human	ensembl	74_37	-1	known	missense	c.2014	p.M672L	0.000	NULL	NULL	-	no_errors	FANCB	HGNC	ENSG00000181544	tier1	-	-	64	0	0.00	36	14	28.00
MTHFSD	0	genome.wustl.edu	37	16	86575760	86575760	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	16	86575760	86575760	T	A	SNP	MTHFSD	ENST00000360900	human	ensembl	74_37	-1	known	missense	c.502	p.M168L	0.994	pfam_FTHF_cligase	pfam_FTHF_cligase,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MTHFSD	HGNC	ENSG00000103248	tier1	-	-	15	0	0.00	8	10	55.56
UBOX5	0	genome.wustl.edu	37	20	3102120	3102120	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	20	3102120	3102120	G	T	SNP	UBOX5	ENST00000217173	human	ensembl	74_37	-1	known	missense	c.1165	p.P389T	1.000	NULL	pfam_Ubox_domain,smart_Ubox_domain,pfscan_Znf_RING	-	no_errors	UBOX5	HGNC	ENSG00000185019	tier1	-	-	64	0	0.00	39	5	10.87
CASP5	0	genome.wustl.edu	37	11	104879687	104879687	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	104879687	104879687	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.67	p.R23fs	0.000	NULL	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1			56	0	0.00	38	7	15.56
NAPEPLD	0	genome.wustl.edu	37	7	102760030	102760030	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	102760030	102760030	T	C	SNP	NAPEPLD	ENST00000455523	human	ensembl	74_37	-1	known	missense	c.1154	p.E385G	0.919	NULL	NULL	-	no_errors	NAPEPLD	HGNC	ENSG00000161048	tier1	-	-	42	0	0.00	30	4	11.76
MED19	0	genome.wustl.edu	37	11	57471519	57471521	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	57471519	57471521	GCT	-	DEL	MED19	ENST00000431606	human	ensembl	74_37	-1	known	in_frame_del	c.726_724	p.S242in_frame_del	1.000:1.000:1.000	NULL	pfam_Mediator_Med19_met,pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	MED19	HGNC	ENSG00000156603	tier1			34	0	0.00	29	4	12.12
TPTE2P5	0	genome.wustl.edu	37	13	41429945	41429945	+	RNA	SNP	C	C	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	13	41429945	41429945	C	A	SNP	TPTE2P5	ENST00000379515	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.334	-	-	-	no_errors	TPTE2P5	HGNC	ENSG00000168852	tier1	-	-	53	0	0.00	80	35	30.43
KRTAP5-5	0	genome.wustl.edu	37	11	1651597	1651597	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	1651597	1651597	C	T	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	missense	c.527	p.S176F	0.192	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	116	0	0.00	95	22	18.80
ID4	0	genome.wustl.edu	37	6	19838106	19838108	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	6	19838106	19838108	GCG	-	DEL	ID4	ENST00000378700	human	ensembl	74_37	+1	known	in_frame_del	c.121_123	p.A44in_frame_del	0.988:0.989:0.984	superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_bHLH_dom,superfamily_bHLH_dom,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ID4	HGNC	ENSG00000172201	tier1			13	0	0.00	22	4	15.38
HGF	0	genome.wustl.edu	37	7	81392065	81392065	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	81392065	81392065	G	T	SNP	HGF	ENST00000222390	human	ensembl	74_37	-1	known	missense	c.212	p.A71D	1.000	pfam_PAN-1_domain,smart_Pan_app,pfscan_Pan_app	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGF	HGNC	ENSG00000019991	tier1	-	-	53	0	0.00	45	4	8.16
ANKRD28	0	genome.wustl.edu	37	3	15838150	15838151	+	RNA	INS	-	-	TT			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	3	15838150	15838151	-	TT	INS	ANKRD28	ENST00000461696	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016:0.428	-	-	-	no_errors	ANKRD28	HGNC	ENSG00000206560	tier1			13	0	0.00	4	4	50.00
BTAF1	0	genome.wustl.edu	37	10	93717044	93717044	+	Silent	SNP	C	C	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	10	93717044	93717044	C	A	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	silent	c.894	p.S298	0.990	superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	tier1	-	-	26	0	0.00	19	3	13.64
CCDC43	0	genome.wustl.edu	37	17	42761285	42761285	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	17	42761285	42761285	G	A	SNP	CCDC43	ENST00000315286	human	ensembl	74_37	-1	known	nonsense	c.247	p.R83*	0.996	NULL	NULL	-	no_errors	CCDC43	HGNC	ENSG00000180329	tier1	-	-	30	0	0.00	38	4	9.52
ADH1A	0	genome.wustl.edu	37	4	100200649	100200649	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	4	100200649	100200649	A	-	DEL	ADH1A	ENST00000209668	human	ensembl	74_37	-1	known	frame_shift_del	c.1037	p.L346fs	0.923	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH1A	HGNC	ENSG00000187758	tier1			59	0	0.00	18	2	10.00
OS9	0	genome.wustl.edu	37	12	58112966	58112966	+	Splice_Site	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	12	58112966	58112966	G	T	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	splice_site	c.1600+1	e12+1	1.000	-	-	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	41	0	0.00	31	4	11.43
SEC16A	0	genome.wustl.edu	37	9	139347922	139347922	+	Silent	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	9	139347922	139347922	G	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.6117	p.S2039	0.010	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	66	0	0.00	38	5	11.63
KRTAP5-5	0	genome.wustl.edu	37	11	1651627	1651627	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	1651627	1651627	C	T	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	missense	c.557	p.S186F	0.931	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	101	0	0.00	102	10	8.93
SND1	0	genome.wustl.edu	37	7	127721533	127721533	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	7	127721533	127721533	A	C	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.2090	p.Y697S	0.997	pfam_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157	tier1	-	-	32	0	0.00	15	10	40.00
TMTC3	0	genome.wustl.edu	37	12	88589095	88589095	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	12	88589095	88589095	A	-	DEL	TMTC3	ENST00000266712	human	ensembl	74_37	+1	known	frame_shift_del	c.2414	p.E805fs	1.000	NULL	pfam_TPR_2,pfam_TPR_1,pfam_DUF1736,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC3	HGNC	ENSG00000139324	tier1			33	0	0.00	15	4	21.05
SF1	0	genome.wustl.edu	37	11	64535176	64535176	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	11	64535176	64535176	G	T	SNP	SF1	ENST00000377390	human	ensembl	74_37	-1	known	missense	c.1209	p.S403R	1.000	NULL	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066	tier1	-	-	36	0	0.00	40	5	11.11
SERPINF2	0	genome.wustl.edu	37	17	1657814	1657814	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	17	1657814	1657814	G	A	SNP	SERPINF2	ENST00000324015	human	ensembl	74_37	+1	known	missense	c.1462	p.G488S	0.000	NULL	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF2	HGNC	ENSG00000167711	tier1	-	-	18	0	0.00	2	11	84.62
CENPB	0	genome.wustl.edu	37	20	3767122	3767184	+	In_Frame_Del	DEL	GGGGCCCATCCCGGCGCGCCCCCCGCCCCGGGGCCCGGCGCCGCCGCCGCCGCCCCGGGGCGG	GGGGCCCATCCCGGCGCGCCCCCCGCCCCGGGGCCCGGCGCCGCCGCCGCCGCCCCGGGGCGG	-			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	GGGGCCCATCCCGGCGCGCCCCCCGCCCCGGGGCCCGGCGCCGCCGCCGCCGCCCCGGGGCGG	GGGGCCCATCCCGGCGCGCCCCCCGCCCCGGGGCCCGGCGCCGCCGCCGCCGCCCCGGGGCGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	20	3767122	3767184	GGGGCCCATCCCGGCGCGCCCCCCGCCCCGGGGCCCGGCGCCGCCGCCGCCGCCCCGGGGCGG	-	DEL	CENPB	ENST00000379751	human	ensembl	74_37	-1	known	in_frame_del	c.9_1	p.MGP1in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_Homeodomain-like,pfscan_HTH_Psq	pfam_Centromere_CenpB_dimerisation,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	CENPB	HGNC	ENSG00000125817	tier1			NA	NA	NA	NA	NA	NA
CRAT	0	genome.wustl.edu	37	9	131871486	131871486	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	9	131871486	131871486	T	A	SNP	CRAT	ENST00000441796	human	ensembl	74_37	-1	known	missense	c.98	p.H33L	0.001	NULL	NULL	-	no_errors	CRAT	HGNC	ENSG00000095321	tier1	-	-	17	0	0.00	24	10	29.41
IGDCC3	0	genome.wustl.edu	37	15	65628224	65628224	+	Silent	SNP	G	G	A			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	15	65628224	65628224	G	A	SNP	IGDCC3	ENST00000327987	human	ensembl	74_37	-1	known	silent	c.480	p.C160	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC3	HGNC	ENSG00000174498	tier1	-	-	33	0	0.00	19	12	38.71
LRRC7	0	genome.wustl.edu	37	1	70226053	70226053	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	1	70226053	70226053	A	T	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.166	p.N56Y	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	38	0	0.00	43	4	8.51
NOTUM	0	genome.wustl.edu	37	17	79918624	79918624	+	Silent	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	17	79918624	79918624	C	T	SNP	NOTUM	ENST00000409678	human	ensembl	74_37	-1	known	silent	c.162	p.L54	1.000	NULL	pfam_NOTUM	-	no_errors	NOTUM	HGNC	ENSG00000185269	tier1	-	-	38	0	0.00	40	4	9.09
MAP1S	0	genome.wustl.edu	37	19	17837618	17837618	+	Silent	SNP	C	C	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	19	17837618	17837618	C	T	SNP	MAP1S	ENST00000324096	human	ensembl	74_37	+1	known	silent	c.1425	p.S475	0.383	NULL	NULL	-	no_errors	MAP1S	HGNC	ENSG00000130479	tier1	-	-	33	0	0.00	39	4	9.30
RHPN1	0	genome.wustl.edu	37	8	144461583	144461583	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	8	144461583	144461583	G	T	SNP	RHPN1	ENST00000289013	human	ensembl	74_37	+1	known	missense	c.850	p.A284S	1.000	pfam_BRO1_dom,pfscan_BRO1_dom	pfam_BRO1_dom,pfam_HR1_rho-bd,pfam_PDZ,superfamily_PDZ,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_PDZ,pfscan_BRO1_dom,pfscan_PDZ	-	no_errors	RHPN1	HGNC	ENSG00000158106	tier1	-	-	48	0	0.00	45	6	11.76
SKIDA1	0	genome.wustl.edu	37	10	21805720	21805720	+	Silent	SNP	A	A	G			TCGA-DX-A8BN-01A-11D-A37C-09	TCGA-DX-A8BN-11A-22D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0238c3ff-c720-4350-b0e8-5b4823f91075	87bd9e83-45b1-430d-b7ef-bb83264ebbb3	10	21805720	21805720	A	G	SNP	SKIDA1	ENST00000449193	human	ensembl	74_37	-1	known	silent	c.1032	p.H344	0.972	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	SKIDA1	HGNC	ENSG00000180592	tier1	-	-	32	0	0.00	63	6	8.70
