Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
MOB2	0	genome.wustl.edu	37	11	1502032	1502032	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	1502032	1502032	C	A	SNP	MOB2	ENST00000329957	human	ensembl	74_37	-1	novel	missense	c.194	p.R65M	1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB2	HGNC	ENSG00000182208	tier1	-	-	50	0	0.00	26	4	13.33
APLP2	0	genome.wustl.edu	37	11	130003584	130003584	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	130003584	130003584	A	C	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.1645	p.K549Q	1.000	superfamily_Amyloid_glyco_E2_domain	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234	tier1	-	-	43	0	0.00	16	8	33.33
ZNF175	0	genome.wustl.edu	37	19	52090690	52090690	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	19	52090690	52090690	G	T	SNP	ZNF175	ENST00000262259	human	ensembl	74_37	+1	known	missense	c.1106	p.G369V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF175	HGNC	ENSG00000105497	tier1	-	-	37	0	0.00	23	5	17.86
ATRX	0	genome.wustl.edu	37	X	76937766	76937769	+	Frame_Shift_Del	DEL	TTTC	TTTC	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	TTTC	TTTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	X	76937766	76937769	TTTC	-	DEL	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	frame_shift_del	c.2982_2979	p.K993fs	0.936:0.944:0.949:0.993	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			41	0	0.00	13	13	50.00
SIRPB2	0	genome.wustl.edu	37	20	1456846	1456846	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	20	1456846	1456846	A	C	SNP	SIRPB2	ENST00000359801	human	ensembl	74_37	-1	known	missense	c.995	p.M332R	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIRPB2	HGNC	ENSG00000196209	tier1	-	-	52	0	0.00	30	8	21.05
STT3B	0	genome.wustl.edu	37	3	31574393	31574394	+	RNA	INS	-	-	TACTCC			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	31574393	31574394	-	TACTCC	INS	STT3B	ENST00000453168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.977	-	-	-	no_errors	STT3B	HGNC	ENSG00000163527	tier1			NA	NA	NA	NA	NA	NA
ULK4P3	0	genome.wustl.edu	37	15	30396080	30396080	+	RNA	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	30396080	30396080	C	A	SNP	ULK4P3	ENST00000565158	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.062	-	-	-	no_errors	ULK4P3	HGNC	ENSG00000178081	tier1	-	-	326	1	0.31	209	34	13.88
FLOT2	0	genome.wustl.edu	37	17	27207228	27207228	+	RNA	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	27207228	27207228	G	C	SNP	FLOT2	ENST00000577789	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	FLOT2	HGNC	ENSG00000132589	tier1	-	-	36	0	0.00	25	4	13.79
ENSG00000229334	0	genome.wustl.edu	37	3	194353772	194353773	+	RNA	INS	-	-	CCGCCCGACAG			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	194353772	194353773	-	CCGCCCGACAG	INS	ENSG00000229334	ENST00000447139	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030:0.049	-	-	-	no_errors	AC046143.3	Clone_based_vega_gene	ENSG00000229334	tier1			NA	NA	NA	NA	NA	NA
P2RX7	0	genome.wustl.edu	37	12	121605337	121605337	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	121605337	121605337	G	A	SNP	P2RX7	ENST00000546057	human	ensembl	74_37	+1	known	missense	c.791	p.R264H	0.000	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X7_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX7	HGNC	ENSG00000089041	tier1	rs149639375	-	62	0	0.00	38	8	17.39
MARCH1	0	genome.wustl.edu	37	4	164533818	164533818	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	4	164533818	164533818	G	A	SNP	MARCH1	ENST00000514618	human	ensembl	74_37	-1	novel	silent	c.615	p.N205	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH1	HGNC	ENSG00000145416	tier1	-	-	55	0	0.00	47	11	18.64
CRYBA4	0	genome.wustl.edu	37	22	27026429	27026429	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	22	27026429	27026429	G	T	SNP	CRYBA4	ENST00000354760	human	ensembl	74_37	+1	known	missense	c.569	p.S190I	0.995	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBA4	HGNC	ENSG00000196431	tier1	-	-	65	0	0.00	42	9	17.65
USP13	0	genome.wustl.edu	37	3	179424851	179424851	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	179424851	179424851	A	G	SNP	USP13	ENST00000263966	human	ensembl	74_37	+1	known	missense	c.607	p.R203G	1.000	pirsf_Ubiquitinyl_hydrolase	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP13	HGNC	ENSG00000058056	tier1	-	-	28	0	0.00	39	4	9.30
LAMC2	0	genome.wustl.edu	37	1	183212350	183212350	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	183212350	183212350	C	T	SNP	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	nonsense	c.3397	p.Q1133*	0.346	NULL	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085	tier1	-	-	37	0	0.00	40	17	29.82
ARAP1	0	genome.wustl.edu	37	11	72404505	72404505	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	72404505	72404505	G	A	SNP	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	silent	c.3819	p.V1273	0.993	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635	tier1	-	-	72	0	0.00	40	11	21.57
ZNF724P	0	genome.wustl.edu	37	19	23406130	23406130	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	19	23406130	23406130	C	A	SNP	ZNF724P	ENST00000418100	human	ensembl	74_37	-1	novel	missense	c.917	p.G306V	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF724P	HGNC	ENSG00000196081	tier1	-	-	42	0	0.00	32	4	11.11
TRIM46	0	genome.wustl.edu	37	1	155147426	155147426	+	RNA	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	155147426	155147426	G	T	SNP	TRIM46	ENST00000468878	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRIM46	HGNC	ENSG00000163462	tier1	-	-	37	0	0.00	36	10	21.74
RARB	0	genome.wustl.edu	37	3	25636129	25636129	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	25636129	25636129	C	G	SNP	RARB	ENST00000404969	human	ensembl	74_37	+1	known	missense	c.1131	p.I377M	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Nuc_orph_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARB	HGNC	ENSG00000077092	tier1	-	-	43	0	0.00	29	19	38.78
SLC10A7	0	genome.wustl.edu	37	4	147227160	147227160	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	4	147227160	147227160	A	G	SNP	SLC10A7	ENST00000394062	human	ensembl	74_37	-1	known	missense	c.473	p.L158P	1.000	pfam_BilAc/Na_symport,pirsf_Put_Na-Bile_cotransptr	pfam_BilAc/Na_symport,pirsf_Put_Na-Bile_cotransptr	-	no_errors	SLC10A7	HGNC	ENSG00000120519	tier1	-	-	42	0	0.00	30	4	11.76
KIF3B	0	genome.wustl.edu	37	20	30917948	30917948	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	20	30917948	30917948	A	G	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	missense	c.1973	p.E658G	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	tier1	-	-	55	0	0.00	56	6	9.68
ACSL6	0	genome.wustl.edu	37	5	131298244	131298244	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	131298244	131298244	T	C	SNP	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	missense	c.1841	p.H614R	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398	tier1	-	-	27	0	0.00	38	5	11.63
TSPEAR	0	genome.wustl.edu	37	21	45929222	45929222	+	Silent	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	21	45929222	45929222	G	T	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	silent	c.1614	p.I538	0.867	pfam_EPTP,pfscan_EAR	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	tier1	-	-	31	0	0.00	29	4	12.12
ZFR	0	genome.wustl.edu	37	5	32379260	32379260	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	32379260	32379260	G	A	SNP	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	silent	c.2796	p.L932	0.993	pfam_DZF,smart_DZF	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097	tier1	-	-	21	0	0.00	24	7	22.58
MAGEL2	0	genome.wustl.edu	37	15	23890932	23890932	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	23890932	23890932	G	C	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.149	p.P50R	0.068	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	46	0	0.00	24	8	25.00
SRCIN1	0	genome.wustl.edu	37	17	36700164	36700164	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	36700164	36700164	G	A	SNP	SRCIN1	ENST00000264659	human	ensembl	74_37	-1	known	missense	c.3311	p.P1104L	0.995	NULL	pfam_AIP3_C	-	no_errors	SRCIN1	HGNC	ENSG00000017373	tier1	-	-	137	0	0.00	101	43	29.86
CEACAM5	0	genome.wustl.edu	37	19	42224881	42224881	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	19	42224881	42224881	C	G	SNP	CEACAM5	ENST00000221992	human	ensembl	74_37	+1	known	missense	c.1811	p.S604C	0.002	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM5	HGNC	ENSG00000105388	tier1	-	-	79	0	0.00	54	7	11.48
CCL15	0	genome.wustl.edu	37	17	34324877	34324877	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	34324877	34324877	G	A	SNP	CCL15	ENST00000354059	human	ensembl	74_37	-1	known	missense	c.268	p.R90W	0.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL15	HGNC	ENSG00000267596	tier1	rs138739843	-	60	0	0.00	54	9	14.06
PCDHA12	0	genome.wustl.edu	37	5	140256852	140256852	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	140256852	140256852	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.1795	p.A599T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	132	0	0.00	105	13	11.02
IDH1	0	genome.wustl.edu	37	2	209110099	209110099	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	2	209110099	209110099	G	C	SNP	IDH1	ENST00000345146	human	ensembl	74_37	-1	known	missense	c.464	p.T155S	1.000	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	-	no_errors	IDH1	HGNC	ENSG00000138413	tier1	-	-	56	0	0.00	27	24	47.06
ADAMTSL3	0	genome.wustl.edu	37	15	84506902	84506902	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	84506902	84506902	C	T	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.662	p.A221V	0.566	prints_Peptidase_M12B_ADAM-TS	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	tier1	-	-	56	0	0.00	34	4	10.26
OR56A3	0	genome.wustl.edu	37	11	5969152	5969152	+	Silent	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	5969152	5969152	C	T	SNP	OR56A3	ENST00000329564	human	ensembl	74_37	+1	known	silent	c.576	p.S192	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A3	HGNC	ENSG00000184478	tier1	-	-	53	0	0.00	17	8	32.00
WASH3P	0	genome.wustl.edu	37	15	102513202	102513202	+	RNA	DEL	C	C	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	102513202	102513202	C	-	DEL	WASH3P	ENST00000354296	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1			19	0	0.00	13	5	27.78
CNTNAP5	0	genome.wustl.edu	37	2	125547486	125547486	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	2	125547486	125547486	G	A	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	silent	c.2757	p.T919	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	45	0	0.00	26	6	18.75
OR10C1	0	genome.wustl.edu	37	6	29407999	29407999	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	6	29407999	29407999	G	C	SNP	OR10C1	ENST00000444197	human	ensembl	74_37	+1	known	missense	c.207	p.E69D	0.558	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR10C1	HGNC	ENSG00000206474	tier1	-	-	56	0	0.00	42	6	12.50
DHX37	0	genome.wustl.edu	37	12	125436983	125436983	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	125436983	125436983	G	A	SNP	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	silent	c.2829	p.S943	0.290	pfam_DUF1605,superfamily_P-loop_NTPase	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	tier1	-	-	35	0	0.00	19	10	34.48
TDRD15	0	genome.wustl.edu	37	2	21363630	21363630	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	2	21363630	21363630	G	T	SNP	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	missense	c.3291	p.W1097C	1.000	NULL	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1	-	-	72	0	0.00	41	4	8.89
ATP13A5	0	genome.wustl.edu	37	3	193081133	193081133	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	193081133	193081133	G	T	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	nonsense	c.276	p.C92*	0.886	pfam_ATPase_P-typ_Cation_typ_V,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527	tier1	-	-	52	0	0.00	30	4	11.76
PKMYT1	0	genome.wustl.edu	37	16	3022637	3022637	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	16	3022637	3022637	G	-	DEL	PKMYT1	ENST00000431515	human	ensembl	74_37	-1	putative	frame_shift_del	c.1507	p.R503fs	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PKMYT1	HGNC	ENSG00000127564	tier1			44	0	0.00	31	6	16.22
MLLT3	0	genome.wustl.edu	37	9	20414373	20414373	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	9	20414373	20414373	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.471	p.S157	0.207	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	tier1	-	-	52	0	0.00	46	5	9.80
PCDHGA4	0	genome.wustl.edu	37	5	140736262	140736262	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	140736262	140736262	G	A	SNP	PCDHGA4	ENST00000571252	human	ensembl	74_37	+1	known	missense	c.1495	p.A499T	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576	tier1	-	-	39	0	0.00	19	15	44.12
TSPYL4	0	genome.wustl.edu	37	6	116574399	116574399	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	6	116574399	116574399	A	T	SNP	TSPYL4	ENST00000420283	human	ensembl	74_37	-1	known	missense	c.773	p.F258Y	0.991	pfam_NAP_family	pfam_NAP_family	-	no_errors	TSPYL4	HGNC	ENSG00000187189	tier1	-	-	49	0	0.00	32	4	11.11
LDHAL6CP	0	genome.wustl.edu	37	12	63398447	63398447	+	RNA	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	63398447	63398447	G	A	SNP	LDHAL6CP	ENST00000550738	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LDHAL6CP	HGNC	ENSG00000250517	tier1	-	-	23	0	0.00	16	3	15.79
KRT12	0	genome.wustl.edu	37	17	39023145	39023145	+	Silent	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	39023145	39023145	C	T	SNP	KRT12	ENST00000251643	human	ensembl	74_37	-1	known	silent	c.294	p.G98	0.002	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT12	HGNC	ENSG00000187242	tier1	-	-	75	0	0.00	35	21	36.84
PCDHGA1	0	genome.wustl.edu	37	5	140710512	140710512	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	140710512	140710512	G	A	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	silent	c.261	p.A87	0.004	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	tier1	-	-	28	0	0.00	28	5	15.15
LOC100287042	0	genome.wustl.edu	37	17	73269841	73269842	+	RNA	INS	-	-	TTATT			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	73269841	73269842	-	TTATT	INS	LOC100287042	ENST00000585075	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	RP11-649A18.12	Clone_based_vega_gene	ENSG00000263843	tier1			NA	NA	NA	NA	NA	NA
ENSG00000255641	0	genome.wustl.edu	37	12	10588425	10588425	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	10588425	10588425	C	T	SNP	ENSG00000255641	ENST00000539033	human	ensembl	74_37	-1	known	missense	c.161	p.G54E	0.001	NULL	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	NKG2-E	Uniprot_gn	ENSG00000255641	tier1	-	-	109	0	0.00	60	13	17.81
BNIP2	0	genome.wustl.edu	37	15	59955820	59955820	+	RNA	SNP	T	T	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	59955820	59955820	T	C	SNP	BNIP2	ENST00000478981	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.931	-	-	-	no_errors	BNIP2	HGNC	ENSG00000140299	tier1	-	-	56	0	0.00	22	23	51.11
TM7SF2	0	genome.wustl.edu	37	11	64880999	64880999	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	64880999	64880999	T	A	SNP	TM7SF2	ENST00000279263	human	ensembl	74_37	+1	known	missense	c.536	p.L179H	1.000	pfam_Ergosterol_biosynth_ERG4_ERG24	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_DUF1295	-	no_errors	TM7SF2	HGNC	ENSG00000149809	tier1	-	-	59	0	0.00	67	6	8.22
CLN6	0	genome.wustl.edu	37	15	68510864	68510864	+	RNA	SNP	T	T	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	68510864	68510864	T	C	SNP	CLN6	ENST00000569336	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLN6	HGNC	ENSG00000128973	tier1	-	-	39	0	0.00	30	4	11.76
TRIM41	0	genome.wustl.edu	37	5	180651182	180651184	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	180651182	180651184	GGA	-	DEL	TRIM41	ENST00000315073	human	ensembl	74_37	+1	known	in_frame_del	c.183_185	p.E65in_frame_del	0.999:1.000:1.000	smart_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,pfam_DUF3631,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM41	HGNC	ENSG00000146063	tier1			36	0	0.00	25	3	10.71
NRIP1	0	genome.wustl.edu	37	21	16338470	16338470	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	21	16338470	16338470	C	T	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.2044	p.E682K	0.997	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530	tier1	-	-	46	0	0.00	38	17	30.91
KCNA5	0	genome.wustl.edu	37	12	5153679	5153679	+	Silent	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	5153679	5153679	C	T	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	silent	c.366	p.V122	0.966	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	86	0	0.00	57	16	21.92
POU1F1	0	genome.wustl.edu	37	3	87309205	87309205	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	87309205	87309205	G	T	SNP	POU1F1	ENST00000344265	human	ensembl	74_37	-1	known	missense	c.793	p.P265T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU1F1	HGNC	ENSG00000064835	tier1	-	-	38	0	0.00	39	4	9.30
HNRNPA0	0	genome.wustl.edu	37	5	137089075	137089076	+	In_Frame_Ins	INS	-	-	CCG			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	137089075	137089076	-	CCG	INS	HNRNPA0	ENST00000314940	human	ensembl	74_37	-1	known	in_frame_ins	c.681_680	p.231in_frame_insG	0.019:0.578	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA0	HGNC	ENSG00000177733	tier1			12	0	0.00	9	4	30.77
TAS2R38	0	genome.wustl.edu	37	7	141672786	141672786	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	7	141672786	141672786	C	T	SNP	TAS2R38	ENST00000547270	human	ensembl	74_37	-1	known	missense	c.704	p.R235H	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R38	HGNC	ENSG00000257138	tier1	rs144212167	-	71	0	0.00	24	3	11.11
IGF2BP3	0	genome.wustl.edu	37	7	23509681	23509681	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	7	23509681	23509681	C	A	SNP	IGF2BP3	ENST00000258729	human	ensembl	74_37	-1	known	missense	c.49	p.D17Y	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP3	HGNC	ENSG00000136231	tier1	-	-	91	0	0.00	45	6	11.76
NRIP1	0	genome.wustl.edu	37	21	16337345	16337345	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	21	16337345	16337345	C	G	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.3169	p.D1057H	1.000	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530	tier1	-	-	77	0	0.00	77	24	23.76
SARDH	0	genome.wustl.edu	37	9	136573521	136573521	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	9	136573521	136573521	G	C	SNP	SARDH	ENST00000371872	human	ensembl	74_37	-1	known	missense	c.1358	p.P453R	0.040	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C	-	no_errors	SARDH	HGNC	ENSG00000123453	tier1	-	-	73	0	0.00	64	15	18.99
RPH3A	0	genome.wustl.edu	37	12	113316949	113316949	+	Silent	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	113316949	113316949	C	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	silent	c.1197	p.S399	1.000	superfamily_C2_dom	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	51	0	0.00	46	4	8.00
HEMGN	0	genome.wustl.edu	37	9	100693452	100693452	+	Silent	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	9	100693452	100693452	G	T	SNP	HEMGN	ENST00000259456	human	ensembl	74_37	-1	known	silent	c.225	p.G75	0.984	NULL	NULL	-	no_errors	HEMGN	HGNC	ENSG00000136929	tier1	-	-	53	0	0.00	33	4	10.81
CHAT	0	genome.wustl.edu	37	10	50830148	50830148	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	10	50830148	50830148	C	T	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	missense	c.704	p.A235V	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	-	-	49	0	0.00	35	4	10.26
OR14K1	0	genome.wustl.edu	37	1	247902370	247902370	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	247902370	247902370	G	C	SNP	OR14K1	ENST00000283225	human	ensembl	74_37	+1	known	missense	c.454	p.A152P	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14K1	HGNC	ENSG00000153230	tier1	-	-	50	0	0.00	38	13	25.49
ANKRD19P	0	genome.wustl.edu	37	9	95599683	95599683	+	RNA	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	9	95599683	95599683	C	T	SNP	ANKRD19P	ENST00000464387	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	ANKRD19P	HGNC	ENSG00000187984	tier1	-	-	74	0	0.00	67	15	18.29
ZNF718	0	genome.wustl.edu	37	4	155020	155020	+	RNA	SNP	T	T	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	4	155020	155020	T	C	SNP	ZNF718	ENST00000400172	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF718	HGNC	ENSG00000250312	tier1	-	-	39	0	0.00	11	3	21.43
CCDC17	0	genome.wustl.edu	37	1	46086576	46086576	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	46086576	46086576	T	C	SNP	CCDC17	ENST00000343901	human	ensembl	74_37	-1	known	missense	c.1502	p.Q501R	1.000	NULL	NULL	-	no_errors	CCDC17	HGNC	ENSG00000159588	tier1	-	-	42	0	0.00	40	4	9.09
EEF1D	0	genome.wustl.edu	37	8	144671766	144671766	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	8	144671766	144671766	C	-	DEL	EEF1D	ENST00000423316	human	ensembl	74_37	-1	known	frame_shift_del	c.486	p.I163fs	0.017	NULL	pfam_Transl_elong_fac_EF1B_bsu/dsu,pfam_EF-1_beta_acid_region_euk,superfamily_Transl_elong_fac_EF1B_bsu/dsu,smart_Transl_elong_fac_EF1B_bsu/dsu	-	no_errors	EEF1D	HGNC	ENSG00000104529	tier1			28	0	0.00	18	2	10.00
C1orf173	0	genome.wustl.edu	37	1	75038857	75038857	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	75038857	75038857	T	A	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	missense	c.2537	p.E846V	0.966	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	61	0	0.00	31	5	13.89
PLCXD3	0	genome.wustl.edu	37	5	41313778	41313778	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	41313778	41313778	A	T	SNP	PLCXD3	ENST00000328457	human	ensembl	74_37	-1	known	missense	c.907	p.F303I	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD3	HGNC	ENSG00000182836	tier1	-	-	34	0	0.00	33	12	26.67
HSF2BP	0	genome.wustl.edu	37	21	44949728	44949728	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	21	44949728	44949728	C	T	SNP	HSF2BP	ENST00000291560	human	ensembl	74_37	-1	known	missense	c.911	p.R304H	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HSF2BP	HGNC	ENSG00000160207	tier1	rs145814386	-	84	0	0.00	73	16	17.98
ENSG00000244151	0	genome.wustl.edu	37	7	150772280	150772280	+	RNA	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	7	150772280	150772280	G	C	SNP	ENSG00000244151	ENST00000485974	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.056	-	-	-	no_errors	RP11-148K1.12	Clone_based_vega_gene	ENSG00000244151	tier1	-	-	50	0	0.00	21	11	34.38
ANKRD36BP1	0	genome.wustl.edu	37	1	168216218	168216218	+	RNA	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	168216218	168216218	A	G	SNP	ANKRD36BP1	ENST00000358576	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.294	-	-	-	no_errors	ANKRD36BP1	HGNC	ENSG00000214262	tier1	-	-	86	0	0.00	132	13	8.97
TP53	0	genome.wustl.edu	37	17	7578212	7578212	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	7578212	7578212	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.637	p.R213*	0.893	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	85	0	0.00	21	48	69.57
SPATA31E1	0	genome.wustl.edu	37	9	90500141	90500141	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	9	90500141	90500141	C	A	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	missense	c.739	p.Q247K	0.001	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992	tier1	-	-	49	0	0.00	41	7	14.58
PABPC4L	0	genome.wustl.edu	37	4	135121102	135121102	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	4	135121102	135121102	C	A	SNP	PABPC4L	ENST00000529122	human	ensembl	74_37	-1	known	missense	c.1247	p.G416V	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC4L	HGNC	ENSG00000254535	tier1	-	-	36	0	0.00	12	8	40.00
LRP5	0	genome.wustl.edu	37	11	68115452	68115452	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	68115452	68115452	G	T	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.229	p.V77L	0.989	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337	tier1	-	-	56	0	0.00	38	9	19.15
TYRO3	0	genome.wustl.edu	37	15	41859567	41859567	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	41859567	41859567	G	T	SNP	TYRO3	ENST00000263798	human	ensembl	74_37	+1	known	missense	c.793	p.A265S	0.937	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TYRO3	HGNC	ENSG00000092445	tier1	-	-	58	0	0.00	44	4	8.33
CDK8	0	genome.wustl.edu	37	13	26975611	26975611	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	13	26975611	26975611	G	C	SNP	CDK8	ENST00000381527	human	ensembl	74_37	+1	known	missense	c.1119	p.Q373H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK8	HGNC	ENSG00000132964	tier1	-	-	74	0	0.00	44	4	8.33
C9	0	genome.wustl.edu	37	5	39342252	39342252	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	39342252	39342252	C	G	SNP	C9	ENST00000263408	human	ensembl	74_37	-1	known	missense	c.124	p.D42H	1.000	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	C9	HGNC	ENSG00000113600	tier1	-	-	58	0	0.00	93	10	9.71
ENSG00000238009	0	genome.wustl.edu	37	1	133414	133414	+	RNA	SNP	T	T	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	133414	133414	T	G	SNP	ENSG00000238009	ENST00000453576	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.955	-	-	-	no_errors	RP11-34P13.7	Clone_based_vega_gene	ENSG00000238009	tier1	-	-	73	0	0.00	80	17	17.53
TMEM199	0	genome.wustl.edu	37	17	26685947	26685947	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	26685947	26685947	C	G	SNP	TMEM199	ENST00000509083	human	ensembl	74_37	+1	known	missense	c.220	p.L74V	0.018	NULL	pfam_ATPase_Vma12	-	no_errors	TMEM199	HGNC	ENSG00000244045	tier1	-	-	55	0	0.00	32	10	23.81
KCNA5	0	genome.wustl.edu	37	12	5153524	5153524	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	12	5153524	5153524	C	A	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.211	p.P71T	0.043	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	29	0	0.00	15	5	25.00
MUC4	0	genome.wustl.edu	37	3	195508545	195508546	+	Frame_Shift_Ins	INS	-	-	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	195508545	195508546	-	G	INS	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	frame_shift_ins	c.9906_9905	p.S3303fs	0.002:0.002	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1			44	0	0.00	22	3	12.00
ANKUB1	0	genome.wustl.edu	37	3	149485707	149485707	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	149485707	149485707	C	T	SNP	ANKUB1	ENST00000446160	human	ensembl	74_37	-1	known	missense	c.742	p.A248T	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ubiquitin_supergroup	-	no_errors	ANKUB1	HGNC	ENSG00000206199	tier1	-	-	45	0	0.00	33	4	10.81
SULT1E1	0	genome.wustl.edu	37	4	70715166	70715166	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	4	70715166	70715166	A	T	SNP	SULT1E1	ENST00000226444	human	ensembl	74_37	-1	known	missense	c.485	p.M162K	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1E1	HGNC	ENSG00000109193	tier1	-	-	96	0	0.00	82	18	18.00
NUP210	0	genome.wustl.edu	37	3	13413491	13413491	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	13413491	13413491	G	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	silent	c.1629	p.C543	1.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	32	0	0.00	30	4	11.76
C1orf21	0	genome.wustl.edu	37	1	184588751	184588751	+	RNA	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	184588751	184588751	A	G	SNP	C1orf21	ENST00000367514	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	C1orf21	HGNC	ENSG00000116667	tier1	-	-	54	0	0.00	34	23	39.66
TGFBI	0	genome.wustl.edu	37	5	135382982	135382982	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	5	135382982	135382982	C	T	SNP	TGFBI	ENST00000305126	human	ensembl	74_37	+1	known	missense	c.644	p.A215V	1.000	pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	TGFBI	HGNC	ENSG00000120708	tier1	-	-	49	0	0.00	31	4	11.43
LILRB5	0	genome.wustl.edu	37	19	54758267	54758267	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	19	54758267	54758267	C	A	SNP	LILRB5	ENST00000450632	human	ensembl	74_37	-1	known	missense	c.1240	p.D414Y	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB5	HGNC	ENSG00000105609	tier1	-	-	61	0	0.00	40	8	16.67
FAM171A1	0	genome.wustl.edu	37	10	15263009	15263009	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	10	15263009	15263009	G	A	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	silent	c.805	p.L269	1.000	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	tier1	-	-	38	0	0.00	19	3	13.64
ZDBF2	0	genome.wustl.edu	37	2	207162097	207162097	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	2	207162097	207162097	G	T	SNP	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	missense	c.188	p.S63I	1.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	tier1	-	-	36	0	0.00	37	4	9.76
KCNN3	0	genome.wustl.edu	37	1	154680586	154680588	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	154680586	154680588	GCT	-	DEL	KCNN3	ENST00000271915	human	ensembl	74_37	-1	novel	in_frame_del	c.2062_2060	p.Q687in_frame_del	1.000:1.000:1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	tier1			47	0	0.00	51	5	8.93
ZRSR2	0	genome.wustl.edu	37	X	15836747	15836747	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	X	15836747	15836747	T	A	SNP	ZRSR2	ENST00000307771	human	ensembl	74_37	+1	known	missense	c.809	p.V270E	1.000	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,prints_U2_small	pfam_Znf_CCCH,pfam_RRM_dom,smart_Znf_CCCH,smart_RRM_dom_euk,pfscan_RRM_dom,prints_U2_small	-	no_errors	ZRSR2	HGNC	ENSG00000169249	tier1	-	-	31	0	0.00	42	4	8.51
PRX	0	genome.wustl.edu	37	19	40900931	40900931	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	19	40900931	40900931	C	A	SNP	PRX	ENST00000324001	human	ensembl	74_37	-1	known	missense	c.3328	p.G1110W	0.200	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227	tier1	-	-	39	0	0.00	41	4	8.89
TCF20	0	genome.wustl.edu	37	22	42610573	42610575	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	22	42610573	42610575	AGG	-	DEL	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	in_frame_del	c.739_737	p.S246in_frame_del	1.000:1.000:1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1			43	0	0.00	28	3	9.68
PIF1	0	genome.wustl.edu	37	15	65108804	65108804	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	65108804	65108804	G	A	SNP	PIF1	ENST00000333425	human	ensembl	74_37	-1	known	missense	c.1835	p.A612V	0.996	superfamily_P-loop_NTPase	pfam_DNA_helicase_Pif1,pfam_DNA_helicase,superfamily_P-loop_NTPase	-	no_errors	PIF1	HGNC	ENSG00000140451	tier1	-	-	41	0	0.00	36	4	10.00
HMCN1	0	genome.wustl.edu	37	1	186089277	186089277	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	186089277	186089277	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.12229	p.V4077I	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	71	0	0.00	48	30	38.46
ANKRD11	0	genome.wustl.edu	37	16	89348444	89348444	+	Silent	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	16	89348444	89348444	G	T	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	silent	c.4506	p.P1502	0.008	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1	-	-	54	0	0.00	28	4	12.50
MAPKBP1	0	genome.wustl.edu	37	15	42106769	42106769	+	Silent	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	15	42106769	42106769	G	A	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	silent	c.1020	p.A340	0.547	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	tier1	-	-	71	0	0.00	39	10	20.41
RIN2	0	genome.wustl.edu	37	20	19970901	19970901	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	20	19970901	19970901	A	G	SNP	RIN2	ENST00000255006	human	ensembl	74_37	+1	known	missense	c.2161	p.M721V	1.000	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669	tier1	-	-	40	0	0.00	16	4	20.00
SCN2A	0	genome.wustl.edu	37	2	166223861	166223861	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	2	166223861	166223861	C	A	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.3655	p.L1219M	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	61	0	0.00	42	5	10.64
TMEM11	0	genome.wustl.edu	37	17	21101707	21101707	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	17	21101707	21101707	A	T	SNP	TMEM11	ENST00000317635	human	ensembl	74_37	-1	known	missense	c.509	p.L170Q	1.000	NULL	NULL	-	no_errors	TMEM11	HGNC	ENSG00000178307	tier1	-	-	64	0	0.00	64	6	8.57
GRIK2	0	genome.wustl.edu	37	6	102307208	102307208	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	6	102307208	102307208	G	T	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	missense	c.1364	p.G455V	1.000	pfam_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	32	0	0.00	37	4	9.76
GABRD	0	genome.wustl.edu	37	1	1957077	1957077	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	1	1957077	1957077	A	C	SNP	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	missense	c.370	p.T124P	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730	tier1	-	-	52	0	0.00	53	18	25.35
RCE1	0	genome.wustl.edu	37	11	66612684	66612684	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	11	66612684	66612684	G	A	SNP	RCE1	ENST00000309657	human	ensembl	74_37	+1	known	missense	c.667	p.V223M	0.996	pfam_CAAX_protease	pfam_CAAX_protease	-	no_errors	RCE1	HGNC	ENSG00000173653	tier1	-	-	58	0	0.00	33	4	10.81
SETD1A	0	genome.wustl.edu	37	16	30982809	30982811	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	16	30982809	30982811	TCC	-	DEL	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	in_frame_del	c.3127_3129	p.S1046in_frame_del	0.734:0.781:0.676	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1			58	0	0.00	31	4	11.43
FAM86JP	0	genome.wustl.edu	37	3	125648532	125648532	+	RNA	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	3	125648532	125648532	C	T	SNP	FAM86JP	ENST00000467239	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM86JP	HGNC	ENSG00000171084	tier1	-	-	43	0	0.00	36	16	30.77
ENSG00000229047	0	genome.wustl.edu	37	21	16333666	16333666	+	RNA	SNP	C	C	T			TCGA-DX-A8BV-01A-11D-A37C-09	TCGA-DX-A8BV-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0853cc02-3315-40eb-8997-db4b02d27661	8533ae18-96d9-4fd5-b003-3dd8024121d2	21	16333666	16333666	C	T	SNP	ENSG00000229047	ENST00000446301	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AF127577.10	Clone_based_vega_gene	ENSG00000229047	tier1	-	-	41	0	0.00	38	6	13.64
