Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
GIGYF2	0	genome.wustl.edu	37	2	233708804	233708806	+	In_Frame_Del	DEL	CAA	CAA	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	CAA	CAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	233708804	233708806	CAA	-	DEL	GIGYF2	ENST00000373566	human	ensembl	74_37	+1	known	in_frame_del	c.3004_3006	p.Q1005in_frame_del	1.000:1.000:0.998	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF2	HGNC	ENSG00000204120	tier1			57	0	0.00	42	4	8.70
KIAA1549L	0	genome.wustl.edu	37	11	33569421	33569421	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	33569421	33569421	C	T	SNP	KIAA1549L	ENST00000389726	human	ensembl	74_37	+1	known	missense	c.2624	p.A875V	1.000	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427	tier1	-	-	43	0	0.00	20	11	35.48
PRPF6	0	genome.wustl.edu	37	20	62614400	62614400	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	20	62614400	62614400	C	T	SNP	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	silent	c.72	p.G24	0.848	pfam_PRP1_N	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161	tier1	-	-	44	0	0.00	32	13	28.89
HIP1	0	genome.wustl.edu	37	7	75228536	75228536	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	75228536	75228536	C	T	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	silent	c.150	p.T50	0.695	pfam_ANTH_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946	tier1	-	-	43	0	0.00	37	8	17.78
KAT7	0	genome.wustl.edu	37	17	47903425	47903426	+	Frame_Shift_Ins	INS	-	-	GC			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	47903425	47903426	-	GC	INS	KAT7	ENST00000259021	human	ensembl	74_37	+1	known	frame_shift_ins	c.1544_1545	p.L516fs	1.000:0.989	pfam_MOZ_SAS,superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Znf_C2HC,superfamily_Acyl_CoA_acyltransferase	-	no_errors	KAT7	HGNC	ENSG00000136504	tier1			108	0	0.00	35	27	43.55
ALLC	0	genome.wustl.edu	37	2	3750075	3750075	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	3750075	3750075	C	T	SNP	ALLC	ENST00000252505	human	ensembl	74_37	+1	known	silent	c.1098	p.F366	0.993	superfamily_Galactose-bd-like	pfam_Allantoicase_dom,superfamily_Galactose-bd-like,tigrfam_Allantoicase	-	no_errors	ALLC	HGNC	ENSG00000151360	tier1	-	-	19	0	0.00	12	5	29.41
DNAJC6	0	genome.wustl.edu	37	1	65871755	65871755	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	65871755	65871755	C	T	SNP	DNAJC6	ENST00000371069	human	ensembl	74_37	+1	known	silent	c.2430	p.N810	0.096	superfamily_DnaJ_domain	pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_C2_dom,smart_DnaJ_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	DNAJC6	HGNC	ENSG00000116675	tier1	-	-	62	0	0.00	28	13	31.71
CSMD1	0	genome.wustl.edu	37	8	3265506	3265506	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	3265506	3265506	C	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.1989	p.Q663H	0.991	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	30	0	0.00	37	10	21.28
ASIP	0	genome.wustl.edu	37	20	32848194	32848194	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	20	32848194	32848194	G	A	SNP	ASIP	ENST00000374954	human	ensembl	74_37	+1	known	missense	c.14	p.R5H	0.668	NULL	pfam_Agouti,superfamily_Agouti_dom,smart_Agouti,pfscan_Agouti_dom	-	no_errors	ASIP	HGNC	ENSG00000101440	tier1	rs145074053	-	52	0	0.00	57	13	18.57
TMEM2	0	genome.wustl.edu	37	9	74360217	74360217	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	74360217	74360217	C	A	SNP	TMEM2	ENST00000377044	human	ensembl	74_37	-1	known	missense	c.751	p.G251C	1.000	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	TMEM2	HGNC	ENSG00000135048	tier1	rs139832017	-	46	0	0.00	42	12	21.82
PDZD2	0	genome.wustl.edu	37	5	32074487	32074487	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	32074487	32074487	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.3275	p.R1092H	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	67	0	0.00	41	4	8.89
USH2A	0	genome.wustl.edu	37	1	216591866	216591866	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	216591866	216591866	A	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.641	p.L214H	1.000	superfamily_ConA-like_lec_gl_sf,smart_LamG-like	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	72	0	0.00	35	4	10.26
PCDHGA2	0	genome.wustl.edu	37	5	140718933	140718933	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	140718933	140718933	G	T	SNP	PCDHGA2	ENST00000394576	human	ensembl	74_37	+1	known	missense	c.395	p.R132L	0.987	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA2	HGNC	ENSG00000081853	tier1	-	-	31	0	0.00	29	4	12.12
GRAMD1A	0	genome.wustl.edu	37	19	35491326	35491327	+	RNA	INS	-	-	GCCCT			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	35491326	35491327	-	GCCCT	INS	GRAMD1A	ENST00000603669	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.780:0.776	-	-	-	no_errors	GRAMD1A	HGNC	ENSG00000089351	tier1			NA	NA	NA	NA	NA	NA
YRDC	0	genome.wustl.edu	37	1	38270052	38270052	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	38270052	38270052	T	C	SNP	YRDC	ENST00000373044	human	ensembl	74_37	-1	known	missense	c.689	p.Q230R	0.091	pfam_YrdC-like_dom,superfamily_DHBP_synth_RibB-like_a/b_dom,pfscan_YrdC-like_dom,tigrfam_YrdC-like_dom	pfam_YrdC-like_dom,superfamily_DHBP_synth_RibB-like_a/b_dom,pfscan_YrdC-like_dom,tigrfam_YrdC-like_dom	-	no_errors	YRDC	HGNC	ENSG00000196449	tier1	-	-	45	0	0.00	29	4	12.12
TAF1D	0	genome.wustl.edu	37	11	93468208	93468208	+	RNA	SNP	T	T	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	93468208	93468208	T	A	SNP	TAF1D	ENST00000530089	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TAF1D	HGNC	ENSG00000166012	tier1	-	-	32	0	0.00	15	8	34.78
NXN	0	genome.wustl.edu	37	17	708474	708474	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	708474	708474	G	A	SNP	NXN	ENST00000336868	human	ensembl	74_37	-1	known	silent	c.834	p.L278	1.000	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_errors	NXN	HGNC	ENSG00000167693	tier1	rs193165884	GMAF=0.0005	113	0	0.00	101	83	44.86
PLEC	0	genome.wustl.edu	37	8	144995433	144995433	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	144995433	144995433	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.8967	p.G2989	1.000	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	60	0	0.00	58	17	22.67
MYADML	0	genome.wustl.edu	37	2	33951639	33951640	+	RNA	INS	-	-	GCTAGG			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	33951639	33951640	-	GCTAGG	INS	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.441:0.327	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	tier1			NA	NA	NA	NA	NA	NA
HIST1H3E	0	genome.wustl.edu	37	6	26225736	26225736	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	6	26225736	26225736	G	A	SNP	HIST1H3E	ENST00000360408	human	ensembl	74_37	+1	known	silent	c.354	p.V118	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3E	HGNC	ENSG00000196966	tier1	-	-	91	0	0.00	60	16	21.05
FGF23	0	genome.wustl.edu	37	12	4488550	4488550	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	4488550	4488550	G	A	SNP	FGF23	ENST00000237837	human	ensembl	74_37	-1	known	nonsense	c.199	p.Q67*	0.992	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF23	HGNC	ENSG00000118972	tier1	-	-	22	0	0.00	13	5	27.78
ZC2HC1A	0	genome.wustl.edu	37	8	79609735	79609735	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	79609735	79609735	G	T	SNP	ZC2HC1A	ENST00000263849	human	ensembl	74_37	+1	known	missense	c.598	p.V200F	0.868	NULL	NULL	-	no_errors	ZC2HC1A	HGNC	ENSG00000104427	tier1	-	-	76	0	0.00	85	11	11.46
YWHAE	0	genome.wustl.edu	37	17	1265304	1265305	+	Splice_Site	INS	-	-	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	1265304	1265305	-	A	INS	YWHAE	ENST00000264335	human	ensembl	74_37	-1	known	splice_site_ins	c.265-3_265-2	e3-2	1.000:0.895	-	-	-	no_errors	YWHAE	HGNC	ENSG00000108953	tier1			35	0	0.00	40	5	11.11
ZNF80	0	genome.wustl.edu	37	3	113955135	113955135	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	113955135	113955135	G	T	SNP	ZNF80	ENST00000308095	human	ensembl	74_37	-1	known	missense	c.787	p.Q263K	0.010	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF80	HGNC	ENSG00000174255	tier1	-	-	63	0	0.00	30	3	9.09
CHMP7	0	genome.wustl.edu	37	8	23115855	23115855	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	23115855	23115855	C	G	SNP	CHMP7	ENST00000313219	human	ensembl	74_37	+1	known	missense	c.853	p.L285V	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP7	HGNC	ENSG00000147457	tier1	-	-	23	0	0.00	23	12	34.29
TERT	0	genome.wustl.edu	37	5	1279444	1279444	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	1279444	1279444	G	A	SNP	TERT	ENST00000310581	human	ensembl	74_37	-1	known	missense	c.2092	p.R698W	0.757	pfscan_RVT	pfam_Telomerase_RBD,pfam_RVT,smart_Telomerase_RBD,pfscan_RVT,prints_Telomerase_RT	-	no_errors	TERT	HGNC	ENSG00000164362	tier1	-	-	75	0	0.00	84	29	25.66
HOOK3	0	genome.wustl.edu	37	8	42873625	42873625	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	42873625	42873625	C	T	SNP	HOOK3	ENST00000307602	human	ensembl	74_37	+1	known	missense	c.2141	p.P714L	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_t-SNARE	-	no_errors	HOOK3	HGNC	ENSG00000168172	tier1	-	-	43	0	0.00	27	18	40.00
TIGD7	0	genome.wustl.edu	37	16	3350579	3350579	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	3350579	3350579	C	A	SNP	TIGD7	ENST00000268674	human	ensembl	74_37	-1	known	missense	c.36	p.L12F	1.000	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD7	HGNC	ENSG00000140993	tier1	-	-	77	0	0.00	29	19	38.78
GDF2	0	genome.wustl.edu	37	10	48414171	48414171	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	10	48414171	48414171	G	A	SNP	GDF2	ENST00000249598	human	ensembl	74_37	-1	known	missense	c.697	p.H233Y	0.615	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF2	HGNC	ENSG00000128802	tier1	-	-	29	0	0.00	25	6	19.35
RAG1	0	genome.wustl.edu	37	11	36596224	36596224	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	36596224	36596224	T	C	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	missense	c.1370	p.I457T	1.000	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349	tier1	-	-	34	0	0.00	31	4	11.43
HCST	0	genome.wustl.edu	37	19	36395051	36395051	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	36395051	36395051	G	T	SNP	HCST	ENST00000246551	human	ensembl	74_37	+1	known	missense	c.271	p.G91C	0.078	pfam_DAP10	pfam_DAP10	-	no_errors	HCST	HGNC	ENSG00000126264	tier1	-	-	32	0	0.00	38	4	9.52
WNK2	0	genome.wustl.edu	37	9	96021357	96021357	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	96021357	96021357	C	G	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.2527	p.L843V	0.775	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238	tier1	-	-	167	0	0.00	178	55	23.61
KAT7	0	genome.wustl.edu	37	17	47903406	47903406	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	47903406	47903406	C	T	SNP	KAT7	ENST00000259021	human	ensembl	74_37	+1	known	missense	c.1525	p.R509C	1.000	pfam_MOZ_SAS,superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Znf_C2HC,superfamily_Acyl_CoA_acyltransferase	-	no_errors	KAT7	HGNC	ENSG00000136504	tier1	-	-	110	1	0.90	37	22	37.29
PRSS3	0	genome.wustl.edu	37	9	33798916	33798916	+	RNA	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	33798916	33798916	C	T	SNP	PRSS3	ENST00000495682	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PRSS3	HGNC	ENSG00000010438	tier1	-	-	37	0	0.00	43	6	12.24
DAB1	0	genome.wustl.edu	37	1	57602303	57602303	+	Silent	SNP	A	A	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	57602303	57602303	A	C	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	silent	c.219	p.A73	0.993	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	39	0	0.00	41	4	8.89
MIP	0	genome.wustl.edu	37	12	56847521	56847521	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	56847521	56847521	C	T	SNP	MIP	ENST00000257979	human	ensembl	74_37	-1	known	missense	c.379	p.V127M	1.000	pfam_MIP,superfamily_Aquaporin-like,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	-	no_errors	MIP	HGNC	ENSG00000135517	tier1	-	-	23	0	0.00	12	6	33.33
ZNF592	0	genome.wustl.edu	37	15	85327615	85327615	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	15	85327615	85327615	C	T	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	missense	c.1709	p.P570L	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	tier1	-	-	52	0	0.00	44	16	26.23
PYROXD1	0	genome.wustl.edu	37	12	21590706	21590715	+	Frame_Shift_Del	DEL	GGTGGTCGGC	GGTGGTCGGC	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	GGTGGTCGGC	GGTGGTCGGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	21590706	21590715	GGTGGTCGGC	-	DEL	PYROXD1	ENST00000240651	human	ensembl	74_37	+1	known	frame_shift_del	c.42_51	p.V15fs	1.000:1.000:1.000:1.000:1.000:0.995:0.789:0.996:0.998:0.978	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase	-	no_errors	PYROXD1	HGNC	ENSG00000121350	tier1			NA	NA	NA	NA	NA	NA
MSLNL	0	genome.wustl.edu	37	16	830748	830767	+	Frame_Shift_Del	DEL	GTGTGCACGGGTAGGTGACG	GTGTGCACGGGTAGGTGACG	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	GTGTGCACGGGTAGGTGACG	GTGTGCACGGGTAGGTGACG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	830748	830767	GTGTGCACGGGTAGGTGACG	-	DEL	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	frame_shift_del	c.253_234	p.V79fs	0.379:0.375:0.374:0.201:0.160:0.068:0.036:0.007:0.004:0.001:0.001:0.000:0.001:0.003:0.009:0.010:0.010:0.006:0.004:0.006	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006	tier1			NA	NA	NA	NA	NA	NA
CPZ	0	genome.wustl.edu	37	4	8609140	8609140	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	4	8609140	8609140	G	A	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	silent	c.1215	p.T405	0.006	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625	tier1	-	-	55	0	0.00	26	16	37.21
LINC00473	0	genome.wustl.edu	37	6	166401082	166401082	+	RNA	SNP	A	A	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	6	166401082	166401082	A	T	SNP	LINC00473	ENST00000444465	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00473	HGNC	ENSG00000223414	tier1	-	-	25	0	0.00	15	8	34.78
CHD1	0	genome.wustl.edu	37	5	98236658	98236658	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	98236658	98236658	T	A	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.716	p.N239I	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922	tier1	-	-	39	0	0.00	26	5	16.13
TTC25	0	genome.wustl.edu	37	17	40091496	40091496	+	RNA	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	40091496	40091496	G	T	SNP	TTC25	ENST00000377540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TTC25	HGNC	ENSG00000204815	tier1	-	-	42	0	0.00	44	4	8.33
SEMA5A	0	genome.wustl.edu	37	5	9063189	9063189	+	Silent	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	9063189	9063189	C	A	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	silent	c.2328	p.G776	0.014	NULL	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	tier1	rs142331748	-	27	0	0.00	33	8	19.51
CAB39L	0	genome.wustl.edu	37	13	49925039	49925039	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	13	49925039	49925039	G	A	SNP	CAB39L	ENST00000347776	human	ensembl	74_37	-1	known	silent	c.405	p.A135	1.000	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39L	HGNC	ENSG00000102547	tier1	-	-	56	0	0.00	28	11	27.50
LOC100190940	0	genome.wustl.edu	37	12	130521234	130521235	+	RNA	INS	-	-	AAA			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	130521234	130521235	-	AAA	INS	LOC100190940	ENST00000291374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029:0.046	-	-	-	no_errors	RP11-474D1.3	Clone_based_vega_gene	ENSG00000214039	tier1			9	0	0.00	23	13	36.11
CCM2	0	genome.wustl.edu	37	7	45067387	45067387	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	45067387	45067387	G	T	SNP	CCM2	ENST00000381112	human	ensembl	74_37	+1	known	missense	c.84	p.M28I	0.996	NULL	pfscan_PTB/PI_dom	-	no_errors	CCM2	HGNC	ENSG00000136280	tier1	-	-	30	0	0.00	36	4	10.00
LRRC69	0	genome.wustl.edu	37	8	92136873	92136873	+	RNA	SNP	T	T	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	92136873	92136873	T	G	SNP	LRRC69	ENST00000522144	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	LRRC69	HGNC	ENSG00000214954	tier1	-	-	62	0	0.00	42	21	33.33
PRKACG	0	genome.wustl.edu	37	9	71628289	71628289	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	71628289	71628289	G	A	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	silent	c.720	p.Y240	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059	tier1	-	-	36	0	0.00	16	5	23.81
LOC101927285	0	genome.wustl.edu	37	2	59504863	59504864	+	RNA	INS	-	-	TG			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	59504863	59504864	-	TG	INS	LOC101927285	ENST00000409590	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.139	-	-	-	no_errors	AC007131.1	Clone_based_vega_gene	ENSG00000222030	tier1			10	0	0.00	4	5	55.56
NALCN	0	genome.wustl.edu	37	13	101936334	101936334	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	13	101936334	101936334	C	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1084	p.V362L	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	87	0	0.00	47	25	34.72
SCN8A	0	genome.wustl.edu	37	12	52145167	52145167	+	Silent	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	52145167	52145167	G	A	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	silent	c.2160	p.P720	0.002	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	67	0	0.00	35	9	20.45
TRIOBP	0	genome.wustl.edu	37	22	38120154	38120154	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	22	38120154	38120154	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.1591	p.A531T	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	rs201112075	-	165	0	0.00	129	33	20.12
C2CD5	0	genome.wustl.edu	37	12	22670939	22670939	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	22670939	22670939	C	G	SNP	C2CD5	ENST00000333957	human	ensembl	74_37	-1	known	missense	c.933	p.L311F	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	C2CD5	HGNC	ENSG00000111731	tier1	-	-	61	0	0.00	19	13	40.62
AGPS	0	genome.wustl.edu	37	2	178257538	178257538	+	Silent	SNP	A	A	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	178257538	178257538	A	G	SNP	AGPS	ENST00000264167	human	ensembl	74_37	+1	known	silent	c.21	p.A7	0.895	NULL	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	AGPS	HGNC	ENSG00000018510	tier1	-	-	27	0	0.00	23	5	17.86
CTNND1	0	genome.wustl.edu	37	11	57576781	57576781	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	57576781	57576781	C	T	SNP	CTNND1	ENST00000399050	human	ensembl	74_37	+1	known	missense	c.2278	p.P760S	1.000	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC	ENSG00000198561	tier1	-	-	62	0	0.00	43	4	8.51
SPATA6	0	genome.wustl.edu	37	1	48865230	48865230	+	Silent	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	48865230	48865230	G	T	SNP	SPATA6	ENST00000371847	human	ensembl	74_37	-1	known	silent	c.573	p.S191	0.964	NULL	NULL	-	no_errors	SPATA6	HGNC	ENSG00000132122	tier1	-	-	60	0	0.00	46	4	8.00
DYNC1I1	0	genome.wustl.edu	37	7	95625320	95625320	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	95625320	95625320	G	C	SNP	DYNC1I1	ENST00000324972	human	ensembl	74_37	+1	known	missense	c.955	p.G319R	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I1	HGNC	ENSG00000158560	tier1	-	-	88	0	0.00	53	37	41.11
ASTE1	0	genome.wustl.edu	37	3	130733046	130733047	+	Frame_Shift_Ins	INS	-	-	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	130733046	130733047	-	T	INS	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	frame_shift_ins	c.1895_1894	p.R632fs	0.003:0.014	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533	tier1			29	0	0.00	22	5	18.52
MT-CO2	0	genome.wustl.edu	37	MT	7988	7988	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	MT	7988	7988	C	T	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	missense	c.403	p.L135F	NULL	pfam_Cyt_c_oxidase_su2_C,superfamily_Cupredoxin,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712	tier1	-	-	252	0	0.00	55	122	68.93
PANX1	0	genome.wustl.edu	37	11	93914004	93914004	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	93914004	93914004	C	T	SNP	PANX1	ENST00000227638	human	ensembl	74_37	+1	known	missense	c.1250	p.A417V	0.587	NULL	pfam_Innexin,pfscan_Innexin	-	no_errors	PANX1	HGNC	ENSG00000110218	tier1	-	-	50	0	0.00	34	4	10.53
RHOT2	0	genome.wustl.edu	37	16	720824	720824	+	RNA	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	720824	720824	C	A	SNP	RHOT2	ENST00000569943	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RHOT2	HGNC	ENSG00000140983	tier1	-	-	147	0	0.00	82	45	35.43
SNORD109A	0	genome.wustl.edu	37	15	25287126	25287126	+	RNA	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	15	25287126	25287126	G	T	SNP	SNORD109A	ENST00000459128	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	SNORD109A	HGNC	ENSG00000270246	tier1	-	-	98	0	0.00	43	18	29.51
DST	0	genome.wustl.edu	37	6	56489356	56489356	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	6	56489356	56489356	T	G	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.4802	p.D1601A	1.000	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	32	0	0.00	19	8	29.63
KLHDC4	0	genome.wustl.edu	37	16	87745030	87745030	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	87745030	87745030	C	T	SNP	KLHDC4	ENST00000270583	human	ensembl	74_37	-1	known	silent	c.855	p.R285	0.004	pfam_Kelch_2	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	KLHDC4	HGNC	ENSG00000104731	tier1	-	-	46	0	0.00	41	4	8.89
ETV6	0	genome.wustl.edu	37	12	12006459	12006459	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	12006459	12006459	C	T	SNP	ETV6	ENST00000396373	human	ensembl	74_37	+1	known	nonsense	c.427	p.Q143*	0.992	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV6	HGNC	ENSG00000139083	tier1	-	-	36	0	0.00	16	3	15.79
AKIP1	0	genome.wustl.edu	37	11	8932989	8932989	+	Splice_Site	SNP	A	A	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	8932989	8932989	A	G	SNP	AKIP1	ENST00000309377	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.827	-	-	-	no_errors	AKIP1	HGNC	ENSG00000166452	tier1	rs111610807	-	62	0	0.00	57	5	8.06
PCLO	0	genome.wustl.edu	37	7	82544714	82544714	+	Silent	SNP	A	A	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	82544714	82544714	A	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.12588	p.I4196	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	46	0	0.00	47	7	12.96
DYNC1H1	0	genome.wustl.edu	37	14	102505858	102505858	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	14	102505858	102505858	C	G	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.11570	p.S3857C	0.902	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	33	0	0.00	19	13	40.62
SFMBT1	0	genome.wustl.edu	37	3	52940182	52940182	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	52940182	52940182	G	A	SNP	SFMBT1	ENST00000358080	human	ensembl	74_37	-1	known	missense	c.2407	p.R803W	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT1	HGNC	ENSG00000163935	tier1	-	-	56	0	0.00	49	5	9.09
ARMC10	0	genome.wustl.edu	37	7	102738973	102738973	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	102738973	102738973	G	T	SNP	ARMC10	ENST00000323716	human	ensembl	74_37	+1	known	missense	c.1005	p.K335N	0.996	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	ARMC10	HGNC	ENSG00000170632	tier1	-	-	127	0	0.00	69	13	15.85
ZIC4	0	genome.wustl.edu	37	3	147124452	147124453	+	RNA	INS	-	-	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	147124452	147124453	-	T	INS	ZIC4	ENST00000464144	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1			39	0	0.00	23	3	11.54
SRPX2	0	genome.wustl.edu	37	X	99905881	99905881	+	RNA	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	X	99905881	99905881	C	G	SNP	SRPX2	ENST00000481988	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRPX2	HGNC	ENSG00000102359	tier1	-	-	23	0	0.00	17	5	21.74
CLDN10	0	genome.wustl.edu	37	13	96212707	96212707	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	13	96212707	96212707	G	A	SNP	CLDN10	ENST00000299339	human	ensembl	74_37	+1	known	missense	c.454	p.V152I	0.700	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin10,prints_Claudin	-	no_errors	CLDN10	HGNC	ENSG00000134873	tier1	-	-	39	0	0.00	33	18	35.29
MISP	0	genome.wustl.edu	37	19	758081	758081	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	758081	758081	G	A	SNP	MISP	ENST00000215582	human	ensembl	74_37	+1	known	missense	c.1135	p.D379N	0.000	NULL	NULL	-	no_errors	MISP	HGNC	ENSG00000099812	tier1	-	-	37	0	0.00	33	10	23.26
ZNF658	0	genome.wustl.edu	37	9	40772275	40772275	+	Silent	SNP	T	T	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	40772275	40772275	T	C	SNP	ZNF658	ENST00000377626	human	ensembl	74_37	-1	known	silent	c.3000	p.G1000	0.979	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF658	HGNC	ENSG00000196409	tier1	rs139779674	-	122	1	0.81	24	9	27.27
CDH11	0	genome.wustl.edu	37	16	65016106	65016106	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	65016106	65016106	G	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1098	p.D366E	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	103	0	0.00	40	18	31.03
DGKQ	0	genome.wustl.edu	37	4	961378	961378	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	4	961378	961378	G	T	SNP	DGKQ	ENST00000273814	human	ensembl	74_37	-1	known	missense	c.946	p.L316I	0.037	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ras-assoc,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ras-assoc,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKQ	HGNC	ENSG00000145214	tier1	-	-	48	0	0.00	41	4	8.89
DYNC1H1	0	genome.wustl.edu	37	14	102505775	102505775	+	Silent	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	14	102505775	102505775	C	G	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	silent	c.11487	p.L3829	0.620	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	61	0	0.00	48	14	22.58
C16orf86	0	genome.wustl.edu	37	16	67700794	67700794	+	RNA	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	67700794	67700794	G	A	SNP	C16orf86	ENST00000602974	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C16orf86	HGNC	ENSG00000159761	tier1	-	-	8	0	0.00	16	11	40.74
PCDHA8	0	genome.wustl.edu	37	5	140222280	140222280	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	140222280	140222280	C	T	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	silent	c.1374	p.P458	0.001	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	tier1	-	-	103	0	0.00	136	33	19.41
CHST11	0	genome.wustl.edu	37	12	105151192	105151192	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	105151192	105151192	G	A	SNP	CHST11	ENST00000303694	human	ensembl	74_37	+1	known	missense	c.670	p.A224T	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST11	HGNC	ENSG00000171310	tier1	-	-	54	0	0.00	76	8	9.52
IL17B	0	genome.wustl.edu	37	5	148753976	148753976	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	148753976	148753976	C	T	SNP	IL17B	ENST00000261796	human	ensembl	74_37	-1	known	missense	c.499	p.A167T	0.002	pfam_IL-17_fam,prints_IL-17_chr	pfam_IL-17_fam,prints_IL-17_chr	-	no_errors	IL17B	HGNC	ENSG00000127743	tier1	-	-	28	0	0.00	33	16	32.65
LOC100134368	0	genome.wustl.edu	37	16	436824	436824	+	RNA	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	436824	436824	C	A	SNP	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829	tier1	-	-	45	0	0.00	43	4	8.51
BLNK	0	genome.wustl.edu	37	10	98031113	98031113	+	Silent	SNP	A	A	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	10	98031113	98031113	A	G	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	silent	c.43	p.L15	0.987	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585	tier1	-	-	77	0	0.00	34	13	27.08
IQCG	0	genome.wustl.edu	37	3	197639636	197639636	+	RNA	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	197639636	197639636	G	T	SNP	IQCG	ENST00000469822	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	IQCG	HGNC	ENSG00000114473	tier1	-	-	71	0	0.00	40	16	28.57
EVI2A	0	genome.wustl.edu	37	17	29645499	29645499	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	29645499	29645499	C	G	SNP	EVI2A	ENST00000247270	human	ensembl	74_37	-1	known	missense	c.602	p.R201T	1.000	pfam_Ectropic_vir_integratn_site_2A,pirsf_Ectropic_vir_integratn_site_2A	pfam_Ectropic_vir_integratn_site_2A,pirsf_Ectropic_vir_integratn_site_2A	-	no_errors	EVI2A	HGNC	ENSG00000126860	tier1	-	-	37	0	0.00	27	17	38.64
DYNC1H1	0	genome.wustl.edu	37	14	102504807	102504807	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	14	102504807	102504807	G	C	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.10919	p.S3640T	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	49	0	0.00	42	12	22.22
DYNC1H1	0	genome.wustl.edu	37	14	102505585	102505585	+	Silent	SNP	C	C	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	14	102505585	102505585	C	G	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	silent	c.11454	p.L3818	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	90	0	0.00	58	19	24.68
OR52A5	0	genome.wustl.edu	37	11	5153475	5153475	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	11	5153475	5153475	C	T	SNP	OR52A5	ENST00000307388	human	ensembl	74_37	-1	known	missense	c.398	p.R133K	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52A5	HGNC	ENSG00000171944	tier1	-	-	48	0	0.00	26	8	23.53
KRTAP13-3	0	genome.wustl.edu	37	21	31797893	31797893	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	21	31797893	31797893	C	T	SNP	KRTAP13-3	ENST00000390690	human	ensembl	74_37	-1	known	missense	c.338	p.G113E	0.026	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP13-3	HGNC	ENSG00000240432	tier1	-	-	34	0	0.00	15	12	44.44
CFHR5	0	genome.wustl.edu	37	1	196963259	196963259	+	Frame_Shift_Del	DEL	A	A	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	196963259	196963259	A	-	DEL	CFHR5	ENST00000367414	human	ensembl	74_37	+1	known	frame_shift_del	c.552	p.E187fs	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR5	HGNC	ENSG00000134389	tier1			31	0	0.00	21	3	12.50
ENSG00000188971	0	genome.wustl.edu	37	2	69685840	69685841	+	RNA	DEL	CA	CA	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	69685840	69685841	CA	-	DEL	ENSG00000188971	ENST00000606389	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-427H3.3	Clone_based_vega_gene	ENSG00000188971	tier1			32	0	0.00	21	3	12.50
SRP14-AS1	0	genome.wustl.edu	37	15	40357969	40357970	+	RNA	INS	-	-	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	15	40357969	40357970	-	A	INS	SRP14-AS1	ENST00000504245	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	SRP14-AS1	HGNC	ENSG00000248508	tier1			35	0	0.00	18	4	18.18
PIK3CA	0	genome.wustl.edu	37	3	178936094	178936094	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	178936094	178936094	C	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1636	p.Q546K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs121913286	-	55	0	0.00	35	18	33.96
IL18RAP	0	genome.wustl.edu	37	2	103068444	103068444	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	103068444	103068444	C	T	SNP	IL18RAP	ENST00000264260	human	ensembl	74_37	+1	known	missense	c.1603	p.P535S	1.000	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL18RAP	HGNC	ENSG00000115607	tier1	-	-	29	0	0.00	17	3	15.00
RBM5	0	genome.wustl.edu	37	3	50155888	50155889	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	50155888	50155889	GA	-	DEL	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	frame_shift_del	c.2447_2448	p.*816fs	1.000:0.999	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756	tier1			36	0	0.00	14	5	26.32
SCN2A	0	genome.wustl.edu	37	2	166188073	166188073	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	166188073	166188073	A	T	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.2383	p.N795Y	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	57	0	0.00	26	11	29.73
KDM5A	0	genome.wustl.edu	37	12	464396	464397	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	464396	464397	TC	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.798_797	p.R266fs	1.000:1.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614	tier1			47	0	0.00	26	8	23.53
WRAP73	0	genome.wustl.edu	37	1	3553581	3553581	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	3553581	3553581	C	T	SNP	WRAP73	ENST00000270708	human	ensembl	74_37	-1	known	missense	c.494	p.C165Y	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WRAP73	HGNC	ENSG00000116213	tier1	-	-	53	0	0.00	31	4	11.43
VN1R4	0	genome.wustl.edu	37	19	53770511	53770511	+	Silent	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	53770511	53770511	G	T	SNP	VN1R4	ENST00000311170	human	ensembl	74_37	-1	known	silent	c.408	p.I136	0.003	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R4	HGNC	ENSG00000228567	tier1	-	-	133	0	0.00	140	40	22.22
WDR7	0	genome.wustl.edu	37	18	54424260	54424260	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	18	54424260	54424260	G	C	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.2436	p.L812F	1.000	NULL	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157	tier1	-	-	65	0	0.00	27	6	18.18
CCDC103	0	genome.wustl.edu	37	17	42978925	42978925	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	42978925	42978925	C	T	SNP	CCDC103	ENST00000410006	human	ensembl	74_37	+1	known	missense	c.181	p.R61W	0.742	NULL	NULL	-	no_errors	CCDC103	HGNC	ENSG00000167131	tier1	-	-	67	0	0.00	22	9	29.03
KIAA1109	0	genome.wustl.edu	37	4	123150375	123150375	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	4	123150375	123150375	G	C	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.3022	p.G1008R	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	65	0	0.00	32	14	30.43
FAM60A	0	genome.wustl.edu	37	12	31448178	31448178	+	Frame_Shift_Del	DEL	T	T	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	31448178	31448178	T	-	DEL	FAM60A	ENST00000337682	human	ensembl	74_37	-1	known	frame_shift_del	c.218	p.N73fs	1.000	NULL	NULL	-	no_errors	FAM60A	HGNC	ENSG00000139146	tier1			64	0	0.00	28	3	9.68
OR2B11	0	genome.wustl.edu	37	1	247614903	247614903	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	247614903	247614903	C	T	SNP	OR2B11	ENST00000318749	human	ensembl	74_37	-1	known	missense	c.382	p.V128M	0.666	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B11	HGNC	ENSG00000177535	tier1	-	-	32	0	0.00	14	9	39.13
SPTA1	0	genome.wustl.edu	37	1	158648297	158648297	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	158648297	158648297	G	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.706	p.Q236E	0.011	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	67	0	0.00	32	13	28.26
TSTD3	0	genome.wustl.edu	37	6	99968898	99968899	+	RNA	INS	-	-	GCGCC			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	6	99968898	99968899	-	GCGCC	INS	TSTD3	ENST00000452647	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TSTD3	HGNC	ENSG00000228439	tier1			NA	NA	NA	NA	NA	NA
PMEL	0	genome.wustl.edu	37	12	56355132	56355132	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	56355132	56355132	C	T	SNP	PMEL	ENST00000360714	human	ensembl	74_37	-1	known	silent	c.303	p.Q101	0.999	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	PMEL	HGNC	ENSG00000185664	tier1	-	-	27	0	0.00	35	8	18.60
KIR3DX1	0	genome.wustl.edu	37	19	55045167	55045167	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	55045167	55045167	G	A	SNP	KIR3DX1	ENST00000335056	human	ensembl	74_37	+1	known	missense	c.287	p.G96E	0.001	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	77	0	0.00	77	18	18.95
AXL	0	genome.wustl.edu	37	19	41748828	41748828	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	41748828	41748828	G	C	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	missense	c.1353	p.W451C	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601	tier1	-	-	41	0	0.00	45	12	21.05
VDAC1	0	genome.wustl.edu	37	5	133316708	133316708	+	RNA	DEL	T	T	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	133316708	133316708	T	-	DEL	VDAC1	ENST00000492324	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VDAC1	HGNC	ENSG00000213585	tier1			22	0	0.00	12	5	29.41
ZNF398	0	genome.wustl.edu	37	7	148851394	148851394	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	148851394	148851394	C	T	SNP	ZNF398	ENST00000540950	human	ensembl	74_37	+1	known	silent	c.397	p.L133	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF398	HGNC	ENSG00000197024	tier1	-	-	87	0	0.00	36	17	32.08
KIR3DX1	0	genome.wustl.edu	37	19	55054687	55054687	+	RNA	SNP	C	C	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	55054687	55054687	C	A	SNP	KIR3DX1	ENST00000482404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	72	0	0.00	77	18	18.95
MMP17	0	genome.wustl.edu	37	12	132313098	132313099	+	In_Frame_Ins	INS	-	-	GCTGCCGCT			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	132313098	132313099	-	GCTGCCGCT	INS	MMP17	ENST00000360564	human	ensembl	74_37	+1	known	in_frame_ins	c.59_60	p.24in_frame_insLPL	0.023:0.052	pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP17	HGNC	ENSG00000198598	tier1			NA	NA	NA	NA	NA	NA
MSTO1	0	genome.wustl.edu	37	1	155584433	155584433	+	RNA	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	1	155584433	155584433	C	T	SNP	MSTO1	ENST00000483734	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MSTO1	HGNC	ENSG00000125459	tier1	rs141805415	GMAF=0.0005	43	0	0.00	44	4	8.33
ELL2	0	genome.wustl.edu	37	5	95236448	95236448	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	5	95236448	95236448	G	T	SNP	ELL2	ENST00000237853	human	ensembl	74_37	-1	known	missense	c.903	p.S301R	1.000	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985	tier1	-	-	35	0	0.00	35	4	10.26
TBX3	0	genome.wustl.edu	37	12	115109883	115109883	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	115109883	115109883	C	T	SNP	TBX3	ENST00000257566	human	ensembl	74_37	-1	known	silent	c.1995	p.A665	0.509	NULL	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	tier1	-	-	33	0	0.00	37	6	13.95
DDX5	0	genome.wustl.edu	37	17	62500099	62500102	+	Frame_Shift_Del	DEL	ACAG	ACAG	-			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	ACAG	ACAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	17	62500099	62500102	ACAG	-	DEL	DDX5	ENST00000225792	human	ensembl	74_37	-1	known	frame_shift_del	c.443_440	p.S147fs	1.000:1.000:1.000:1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_P68HR,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX5	HGNC	ENSG00000108654	tier1			30	0	0.00	15	8	34.78
MGEA5	0	genome.wustl.edu	37	10	103557826	103557826	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	10	103557826	103557826	G	C	SNP	MGEA5	ENST00000361464	human	ensembl	74_37	-1	known	missense	c.1895	p.A632G	1.000	NULL	pfam_Beta-N-acetylglucosaminidase,superfamily_Glycoside_hydrolase_SF,superfamily_Acyl_CoA_acyltransferase	-	no_errors	MGEA5	HGNC	ENSG00000198408	tier1	-	-	33	0	0.00	35	4	10.00
ENSG00000253334	0	genome.wustl.edu	37	8	82727640	82727641	+	RNA	INS	-	-	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	8	82727640	82727641	-	A	INS	ENSG00000253334	ENST00000524337	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.496	-	-	-	no_errors	RP13-923O23.6	Clone_based_vega_gene	ENSG00000253334	tier1			20	0	0.00	34	4	10.53
CCDC60	0	genome.wustl.edu	37	12	119943003	119943003	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	12	119943003	119943003	G	A	SNP	CCDC60	ENST00000327554	human	ensembl	74_37	+1	known	missense	c.778	p.G260S	0.246	NULL	NULL	-	no_errors	CCDC60	HGNC	ENSG00000183273	tier1	-	-	57	0	0.00	68	14	17.07
SSNA1	0	genome.wustl.edu	37	9	140083505	140083505	+	RNA	SNP	T	T	G			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	9	140083505	140083505	T	G	SNP	SSNA1	ENST00000459860	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSNA1	HGNC	ENSG00000176101	tier1	-	-	31	0	0.00	35	11	23.91
IFT52	0	genome.wustl.edu	37	20	42275584	42275584	+	Silent	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	20	42275584	42275584	C	T	SNP	IFT52	ENST00000373030	human	ensembl	74_37	+1	known	silent	c.1275	p.D425	0.349	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052	tier1	-	-	81	0	0.00	60	22	26.83
LRRC16B	0	genome.wustl.edu	37	14	24538444	24538444	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	14	24538444	24538444	C	T	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.4081	p.P1361S	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	tier1	-	-	31	0	0.00	21	16	43.24
ITGAL	0	genome.wustl.edu	37	16	30528400	30528400	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	16	30528400	30528400	T	C	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.2969	p.V990A	0.296	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	36	0	0.00	35	5	12.50
ENSG00000267317	0	genome.wustl.edu	37	19	1457894	1457895	+	RNA	INS	-	-	GGGGGGGGG			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	19	1457894	1457895	-	GGGGGGGGG	INS	ENSG00000267317	ENST00000588225	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTB-25B13.12	Clone_based_vega_gene	ENSG00000267317	tier1			NA	NA	NA	NA	NA	NA
FMNL2	0	genome.wustl.edu	37	2	153481908	153481908	+	RNA	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	2	153481908	153481908	G	T	SNP	FMNL2	ENST00000497192	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FMNL2	HGNC	ENSG00000157827	tier1	-	-	39	0	0.00	22	3	12.00
FERD3L	0	genome.wustl.edu	37	7	19184676	19184676	+	Nonsense_Mutation	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	19184676	19184676	G	A	SNP	FERD3L	ENST00000275461	human	ensembl	74_37	-1	known	nonsense	c.310	p.Q104*	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	FERD3L	HGNC	ENSG00000146618	tier1	-	-	32	0	0.00	44	5	10.20
DCC	0	genome.wustl.edu	37	18	51056781	51056781	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	18	51056781	51056781	C	T	SNP	DCC	ENST00000581580	human	ensembl	74_37	+1	putative	missense	c.3218	p.S1073L	0.080	NULL	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	68	0	0.00	30	10	25.00
SSPO	0	genome.wustl.edu	37	7	149509072	149509072	+	RNA	SNP	G	G	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	149509072	149509072	G	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	32	0	0.00	32	4	11.11
ZNF662	0	genome.wustl.edu	37	3	42955859	42955859	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	3	42955859	42955859	G	T	SNP	ZNF662	ENST00000328199	human	ensembl	74_37	+1	known	missense	c.372	p.K124N	0.006	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF662	HGNC	ENSG00000182983	tier1	-	-	45	0	0.00	35	4	10.00
HTT	0	genome.wustl.edu	37	4	3208620	3208620	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	4	3208620	3208620	G	T	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.5985	p.R1995S	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1	-	-	33	0	0.00	26	4	13.33
SRPK2	0	genome.wustl.edu	37	7	104946931	104946932	+	Frame_Shift_Ins	INS	-	-	A			TCGA-DX-A8BX-01A-11D-A37C-09	TCGA-DX-A8BX-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c6670f59-bd1e-4405-98f5-351e9e4ddf11	fc8335fb-7cb7-4553-8701-b16e1bfc3a14	7	104946931	104946932	-	A	INS	SRPK2	ENST00000465112	human	ensembl	74_37	-1	known	frame_shift_ins	c.159_158	p.L53fs	0.028:0.035	NULL	NULL	-	no_errors	SRPK2	HGNC	ENSG00000135250	tier1			72	0	0.00	40	5	11.11
